HEADER OXIDOREDUCTASE 30-SEP-03 1R38 TITLE CRYSTAL STRUCTURE OF H114A MUTANT OF CANDIDA TENUIS XYLOSE REDUCTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.1.1.21; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA TENUIS; SOURCE 3 ORGANISM_TAXID: 45596; SOURCE 4 GENE: XYLR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBEACT.1I KEYWDS ALDO-KETO REDUCTASE, BETA-ALPHA BARREL, DIMER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.KRATZER,K.L.KAVANAGH,D.K.WILSON,B.NIDETZKY REVDAT 4 23-AUG-23 1R38 1 REMARK REVDAT 3 27-OCT-21 1R38 1 REMARK SEQADV REVDAT 2 24-FEB-09 1R38 1 VERSN REVDAT 1 12-OCT-04 1R38 0 JRNL AUTH R.KRATZER,K.L.KAVANAGH,D.K.WILSON,B.NIDETZKY JRNL TITL STUDIES OF THE ENZYMIC MECHANISM OF CANDIDA TENUIS XYLOSE JRNL TITL 2 REDUCTASE (AKR 2B5): X-RAY STRUCTURE AND CATALYTIC REACTION JRNL TITL 3 PROFILE FOR THE H113A MUTANT JRNL REF BIOCHEMISTRY V. 43 4944 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15109252 JRNL DOI 10.1021/BI035833R REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 91348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4483 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.24 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10108 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 192 REMARK 3 SOLVENT ATOMS : 827 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.13200 REMARK 3 B22 (A**2) : -2.69200 REMARK 3 B33 (A**2) : 0.56100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.01700 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.537 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.143 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.625 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.517 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 33.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.TOP REMARK 3 PARAMETER FILE 2 : DNA-RNA.TOP REMARK 3 PARAMETER FILE 3 : WATER.TOP REMARK 3 PARAMETER FILE 4 : ION.TOP REMARK 3 PARAMETER FILE 5 : NAP.TOP REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN_REP.PARAM REMARK 3 TOPOLOGY FILE 2 : DNA-RNA_REP.PARAM REMARK 3 TOPOLOGY FILE 3 : WATER_REP.PARAM REMARK 3 TOPOLOGY FILE 4 : ION.PARAM REMARK 3 TOPOLOGY FILE 5 : NAP.PAR REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1R38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-03. REMARK 100 THE DEPOSITION ID IS D_1000020381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93679 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.29400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: 1JEZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEGME 5000, AMMONIUN SULFATE, CITRATE, REMARK 280 PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 89.99000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.54450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 89.99000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.54450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 178.83693 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -129.08900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 79.86382 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1030 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1069 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 998 LIES ON A SPECIAL POSITION. REMARK 375 HOH D1051 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ALA C 3 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ALA D 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 49 143.73 -176.84 REMARK 500 GLN A 200 53.26 31.85 REMARK 500 ASP A 304 99.85 -59.50 REMARK 500 ASP A 316 37.28 -159.47 REMARK 500 PRO A 319 38.98 -74.90 REMARK 500 GLN B 200 54.61 37.64 REMARK 500 ASP B 316 35.95 -160.49 REMARK 500 PRO B 319 39.68 -77.90 REMARK 500 ALA C 49 149.70 -172.35 REMARK 500 GLN C 200 52.29 33.30 REMARK 500 ILE C 272 57.97 -140.99 REMARK 500 ASP C 304 108.35 -58.86 REMARK 500 ASP C 316 38.91 -156.06 REMARK 500 PRO C 319 30.57 -71.57 REMARK 500 GLN D 200 53.84 36.16 REMARK 500 ASP D 316 38.36 -162.14 REMARK 500 PRO D 319 33.14 -71.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 52 0.07 SIDE CHAIN REMARK 500 TYR B 217 0.08 SIDE CHAIN REMARK 500 TYR C 52 0.07 SIDE CHAIN REMARK 500 PHE D 46 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 950 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 951 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP C 952 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP D 953 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JEZ RELATED DB: PDB REMARK 900 RELATED ID: 1K8C RELATED DB: PDB REMARK 900 RELATED ID: 1MI3 RELATED DB: PDB DBREF 1R38 A 1 322 UNP O74237 XYL1_CANTE 1 322 DBREF 1R38 B 1 322 UNP O74237 XYL1_CANTE 1 322 DBREF 1R38 C 1 322 UNP O74237 XYL1_CANTE 1 322 DBREF 1R38 D 1 322 UNP O74237 XYL1_CANTE 1 322 SEQADV 1R38 ALA A 114 UNP O74237 HIS 114 ENGINEERED MUTATION SEQADV 1R38 ALA B 114 UNP O74237 HIS 114 ENGINEERED MUTATION SEQADV 1R38 ALA C 114 UNP O74237 HIS 114 ENGINEERED MUTATION SEQADV 1R38 ALA D 114 UNP O74237 HIS 114 ENGINEERED MUTATION SEQRES 1 A 322 MET SER ALA SER ILE PRO ASP ILE LYS LEU SER SER GLY SEQRES 2 A 322 HIS LEU MET PRO SER ILE GLY PHE GLY CYS TRP LYS LEU SEQRES 3 A 322 ALA ASN ALA THR ALA GLY GLU GLN VAL TYR GLN ALA ILE SEQRES 4 A 322 LYS ALA GLY TYR ARG LEU PHE ASP GLY ALA GLU ASP TYR SEQRES 5 A 322 GLY ASN GLU LYS GLU VAL GLY ASP GLY VAL LYS ARG ALA SEQRES 6 A 322 ILE ASP GLU GLY LEU VAL LYS ARG GLU GLU ILE PHE LEU SEQRES 7 A 322 THR SER LYS LEU TRP ASN ASN TYR HIS ASP PRO LYS ASN SEQRES 8 A 322 VAL GLU THR ALA LEU ASN LYS THR LEU ALA ASP LEU LYS SEQRES 9 A 322 VAL ASP TYR VAL ASP LEU PHE LEU ILE ALA PHE PRO ILE SEQRES 10 A 322 ALA PHE LYS PHE VAL PRO ILE GLU GLU LYS TYR PRO PRO SEQRES 11 A 322 GLY PHE TYR CYS GLY ASP GLY ASN ASN PHE VAL TYR GLU SEQRES 12 A 322 ASP VAL PRO ILE LEU GLU THR TRP LYS ALA LEU GLU LYS SEQRES 13 A 322 LEU VAL ALA ALA GLY LYS ILE LYS SER ILE GLY VAL SER SEQRES 14 A 322 ASN PHE PRO GLY ALA LEU LEU LEU ASP LEU LEU ARG GLY SEQRES 15 A 322 ALA THR ILE LYS PRO ALA VAL LEU GLN VAL GLU HIS HIS SEQRES 16 A 322 PRO TYR LEU GLN GLN PRO LYS LEU ILE GLU PHE ALA GLN SEQRES 17 A 322 LYS ALA GLY VAL THR ILE THR ALA TYR SER SER PHE GLY SEQRES 18 A 322 PRO GLN SER PHE VAL GLU MET ASN GLN GLY ARG ALA LEU SEQRES 19 A 322 ASN THR PRO THR LEU PHE ALA HIS ASP THR ILE LYS ALA SEQRES 20 A 322 ILE ALA ALA LYS TYR ASN LYS THR PRO ALA GLU VAL LEU SEQRES 21 A 322 LEU ARG TRP ALA ALA GLN ARG GLY ILE ALA VAL ILE PRO SEQRES 22 A 322 LYS SER ASN LEU PRO GLU ARG LEU VAL GLN ASN ARG SER SEQRES 23 A 322 PHE ASN THR PHE ASP LEU THR LYS GLU ASP PHE GLU GLU SEQRES 24 A 322 ILE ALA LYS LEU ASP ILE GLY LEU ARG PHE ASN ASP PRO SEQRES 25 A 322 TRP ASP TRP ASP ASN ILE PRO ILE PHE VAL SEQRES 1 B 322 MET SER ALA SER ILE PRO ASP ILE LYS LEU SER SER GLY SEQRES 2 B 322 HIS LEU MET PRO SER ILE GLY PHE GLY CYS TRP LYS LEU SEQRES 3 B 322 ALA ASN ALA THR ALA GLY GLU GLN VAL TYR GLN ALA ILE SEQRES 4 B 322 LYS ALA GLY TYR ARG LEU PHE ASP GLY ALA GLU ASP TYR SEQRES 5 B 322 GLY ASN GLU LYS GLU VAL GLY ASP GLY VAL LYS ARG ALA SEQRES 6 B 322 ILE ASP GLU GLY LEU VAL LYS ARG GLU GLU ILE PHE LEU SEQRES 7 B 322 THR SER LYS LEU TRP ASN ASN TYR HIS ASP PRO LYS ASN SEQRES 8 B 322 VAL GLU THR ALA LEU ASN LYS THR LEU ALA ASP LEU LYS SEQRES 9 B 322 VAL ASP TYR VAL ASP LEU PHE LEU ILE ALA PHE PRO ILE SEQRES 10 B 322 ALA PHE LYS PHE VAL PRO ILE GLU GLU LYS TYR PRO PRO SEQRES 11 B 322 GLY PHE TYR CYS GLY ASP GLY ASN ASN PHE VAL TYR GLU SEQRES 12 B 322 ASP VAL PRO ILE LEU GLU THR TRP LYS ALA LEU GLU LYS SEQRES 13 B 322 LEU VAL ALA ALA GLY LYS ILE LYS SER ILE GLY VAL SER SEQRES 14 B 322 ASN PHE PRO GLY ALA LEU LEU LEU ASP LEU LEU ARG GLY SEQRES 15 B 322 ALA THR ILE LYS PRO ALA VAL LEU GLN VAL GLU HIS HIS SEQRES 16 B 322 PRO TYR LEU GLN GLN PRO LYS LEU ILE GLU PHE ALA GLN SEQRES 17 B 322 LYS ALA GLY VAL THR ILE THR ALA TYR SER SER PHE GLY SEQRES 18 B 322 PRO GLN SER PHE VAL GLU MET ASN GLN GLY ARG ALA LEU SEQRES 19 B 322 ASN THR PRO THR LEU PHE ALA HIS ASP THR ILE LYS ALA SEQRES 20 B 322 ILE ALA ALA LYS TYR ASN LYS THR PRO ALA GLU VAL LEU SEQRES 21 B 322 LEU ARG TRP ALA ALA GLN ARG GLY ILE ALA VAL ILE PRO SEQRES 22 B 322 LYS SER ASN LEU PRO GLU ARG LEU VAL GLN ASN ARG SER SEQRES 23 B 322 PHE ASN THR PHE ASP LEU THR LYS GLU ASP PHE GLU GLU SEQRES 24 B 322 ILE ALA LYS LEU ASP ILE GLY LEU ARG PHE ASN ASP PRO SEQRES 25 B 322 TRP ASP TRP ASP ASN ILE PRO ILE PHE VAL SEQRES 1 C 322 MET SER ALA SER ILE PRO ASP ILE LYS LEU SER SER GLY SEQRES 2 C 322 HIS LEU MET PRO SER ILE GLY PHE GLY CYS TRP LYS LEU SEQRES 3 C 322 ALA ASN ALA THR ALA GLY GLU GLN VAL TYR GLN ALA ILE SEQRES 4 C 322 LYS ALA GLY TYR ARG LEU PHE ASP GLY ALA GLU ASP TYR SEQRES 5 C 322 GLY ASN GLU LYS GLU VAL GLY ASP GLY VAL LYS ARG ALA SEQRES 6 C 322 ILE ASP GLU GLY LEU VAL LYS ARG GLU GLU ILE PHE LEU SEQRES 7 C 322 THR SER LYS LEU TRP ASN ASN TYR HIS ASP PRO LYS ASN SEQRES 8 C 322 VAL GLU THR ALA LEU ASN LYS THR LEU ALA ASP LEU LYS SEQRES 9 C 322 VAL ASP TYR VAL ASP LEU PHE LEU ILE ALA PHE PRO ILE SEQRES 10 C 322 ALA PHE LYS PHE VAL PRO ILE GLU GLU LYS TYR PRO PRO SEQRES 11 C 322 GLY PHE TYR CYS GLY ASP GLY ASN ASN PHE VAL TYR GLU SEQRES 12 C 322 ASP VAL PRO ILE LEU GLU THR TRP LYS ALA LEU GLU LYS SEQRES 13 C 322 LEU VAL ALA ALA GLY LYS ILE LYS SER ILE GLY VAL SER SEQRES 14 C 322 ASN PHE PRO GLY ALA LEU LEU LEU ASP LEU LEU ARG GLY SEQRES 15 C 322 ALA THR ILE LYS PRO ALA VAL LEU GLN VAL GLU HIS HIS SEQRES 16 C 322 PRO TYR LEU GLN GLN PRO LYS LEU ILE GLU PHE ALA GLN SEQRES 17 C 322 LYS ALA GLY VAL THR ILE THR ALA TYR SER SER PHE GLY SEQRES 18 C 322 PRO GLN SER PHE VAL GLU MET ASN GLN GLY ARG ALA LEU SEQRES 19 C 322 ASN THR PRO THR LEU PHE ALA HIS ASP THR ILE LYS ALA SEQRES 20 C 322 ILE ALA ALA LYS TYR ASN LYS THR PRO ALA GLU VAL LEU SEQRES 21 C 322 LEU ARG TRP ALA ALA GLN ARG GLY ILE ALA VAL ILE PRO SEQRES 22 C 322 LYS SER ASN LEU PRO GLU ARG LEU VAL GLN ASN ARG SER SEQRES 23 C 322 PHE ASN THR PHE ASP LEU THR LYS GLU ASP PHE GLU GLU SEQRES 24 C 322 ILE ALA LYS LEU ASP ILE GLY LEU ARG PHE ASN ASP PRO SEQRES 25 C 322 TRP ASP TRP ASP ASN ILE PRO ILE PHE VAL SEQRES 1 D 322 MET SER ALA SER ILE PRO ASP ILE LYS LEU SER SER GLY SEQRES 2 D 322 HIS LEU MET PRO SER ILE GLY PHE GLY CYS TRP LYS LEU SEQRES 3 D 322 ALA ASN ALA THR ALA GLY GLU GLN VAL TYR GLN ALA ILE SEQRES 4 D 322 LYS ALA GLY TYR ARG LEU PHE ASP GLY ALA GLU ASP TYR SEQRES 5 D 322 GLY ASN GLU LYS GLU VAL GLY ASP GLY VAL LYS ARG ALA SEQRES 6 D 322 ILE ASP GLU GLY LEU VAL LYS ARG GLU GLU ILE PHE LEU SEQRES 7 D 322 THR SER LYS LEU TRP ASN ASN TYR HIS ASP PRO LYS ASN SEQRES 8 D 322 VAL GLU THR ALA LEU ASN LYS THR LEU ALA ASP LEU LYS SEQRES 9 D 322 VAL ASP TYR VAL ASP LEU PHE LEU ILE ALA PHE PRO ILE SEQRES 10 D 322 ALA PHE LYS PHE VAL PRO ILE GLU GLU LYS TYR PRO PRO SEQRES 11 D 322 GLY PHE TYR CYS GLY ASP GLY ASN ASN PHE VAL TYR GLU SEQRES 12 D 322 ASP VAL PRO ILE LEU GLU THR TRP LYS ALA LEU GLU LYS SEQRES 13 D 322 LEU VAL ALA ALA GLY LYS ILE LYS SER ILE GLY VAL SER SEQRES 14 D 322 ASN PHE PRO GLY ALA LEU LEU LEU ASP LEU LEU ARG GLY SEQRES 15 D 322 ALA THR ILE LYS PRO ALA VAL LEU GLN VAL GLU HIS HIS SEQRES 16 D 322 PRO TYR LEU GLN GLN PRO LYS LEU ILE GLU PHE ALA GLN SEQRES 17 D 322 LYS ALA GLY VAL THR ILE THR ALA TYR SER SER PHE GLY SEQRES 18 D 322 PRO GLN SER PHE VAL GLU MET ASN GLN GLY ARG ALA LEU SEQRES 19 D 322 ASN THR PRO THR LEU PHE ALA HIS ASP THR ILE LYS ALA SEQRES 20 D 322 ILE ALA ALA LYS TYR ASN LYS THR PRO ALA GLU VAL LEU SEQRES 21 D 322 LEU ARG TRP ALA ALA GLN ARG GLY ILE ALA VAL ILE PRO SEQRES 22 D 322 LYS SER ASN LEU PRO GLU ARG LEU VAL GLN ASN ARG SER SEQRES 23 D 322 PHE ASN THR PHE ASP LEU THR LYS GLU ASP PHE GLU GLU SEQRES 24 D 322 ILE ALA LYS LEU ASP ILE GLY LEU ARG PHE ASN ASP PRO SEQRES 25 D 322 TRP ASP TRP ASP ASN ILE PRO ILE PHE VAL HET NAP A 950 48 HET NAP B 951 48 HET NAP C 952 48 HET NAP D 953 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 5 NAP 4(C21 H28 N7 O17 P3) FORMUL 9 HOH *827(H2 O) HELIX 1 1 ALA A 27 ALA A 41 1 15 HELIX 2 2 ALA A 49 GLY A 53 5 5 HELIX 3 3 ASN A 54 GLU A 68 1 15 HELIX 4 4 LYS A 72 ILE A 76 5 5 HELIX 5 5 TRP A 83 HIS A 87 5 5 HELIX 6 6 ASP A 88 LYS A 104 1 17 HELIX 7 7 PRO A 146 ALA A 160 1 15 HELIX 8 8 PRO A 172 ALA A 183 1 12 HELIX 9 9 GLN A 200 ALA A 210 1 11 HELIX 10 10 PRO A 222 GLU A 227 1 6 HELIX 11 11 GLN A 230 ASN A 235 1 6 HELIX 12 12 HIS A 242 ASN A 253 1 12 HELIX 13 13 THR A 255 GLN A 266 1 12 HELIX 14 14 LEU A 277 ASN A 284 1 8 HELIX 15 15 THR A 293 LYS A 302 1 10 HELIX 16 16 PRO A 312 ASN A 317 1 6 HELIX 17 17 THR B 30 ALA B 41 1 12 HELIX 18 18 ALA B 49 GLY B 53 5 5 HELIX 19 19 ASN B 54 GLU B 68 1 15 HELIX 20 20 LYS B 72 ILE B 76 5 5 HELIX 21 21 TRP B 83 HIS B 87 5 5 HELIX 22 22 ASP B 88 LYS B 104 1 17 HELIX 23 23 PRO B 146 ALA B 160 1 15 HELIX 24 24 PRO B 172 ALA B 183 1 12 HELIX 25 25 GLN B 200 ALA B 210 1 11 HELIX 26 26 PRO B 222 GLU B 227 1 6 HELIX 27 27 GLN B 230 THR B 236 1 7 HELIX 28 28 HIS B 242 ASN B 253 1 12 HELIX 29 29 THR B 255 GLN B 266 1 12 HELIX 30 30 GLU B 279 ASN B 284 1 6 HELIX 31 31 THR B 293 LYS B 302 1 10 HELIX 32 32 ASP B 311 ASN B 317 1 7 HELIX 33 33 THR C 30 ALA C 41 1 12 HELIX 34 34 ALA C 49 GLY C 53 5 5 HELIX 35 35 ASN C 54 GLU C 68 1 15 HELIX 36 36 LYS C 72 ILE C 76 5 5 HELIX 37 37 TRP C 83 HIS C 87 5 5 HELIX 38 38 ASP C 88 LYS C 104 1 17 HELIX 39 39 PRO C 146 ALA C 160 1 15 HELIX 40 40 PRO C 172 ALA C 183 1 12 HELIX 41 41 GLN C 200 ALA C 210 1 11 HELIX 42 42 PRO C 222 GLU C 227 1 6 HELIX 43 43 GLN C 230 ASN C 235 1 6 HELIX 44 44 HIS C 242 ASN C 253 1 12 HELIX 45 45 THR C 255 GLN C 266 1 12 HELIX 46 46 LEU C 277 ASN C 284 1 8 HELIX 47 47 THR C 293 LYS C 302 1 10 HELIX 48 48 ASP C 311 ASN C 317 1 7 HELIX 49 49 THR D 30 ALA D 41 1 12 HELIX 50 50 ALA D 49 GLY D 53 5 5 HELIX 51 51 ASN D 54 GLU D 68 1 15 HELIX 52 52 LYS D 72 ILE D 76 5 5 HELIX 53 53 TRP D 83 HIS D 87 5 5 HELIX 54 54 ASP D 88 LYS D 104 1 17 HELIX 55 55 PRO D 146 ALA D 160 1 15 HELIX 56 56 PRO D 172 ALA D 183 1 12 HELIX 57 57 GLN D 200 ALA D 210 1 11 HELIX 58 58 PRO D 222 GLU D 227 1 6 HELIX 59 59 GLN D 230 ASN D 235 1 6 HELIX 60 60 HIS D 242 ASN D 253 1 12 HELIX 61 61 THR D 255 GLN D 266 1 12 HELIX 62 62 GLU D 279 ASN D 284 1 6 HELIX 63 63 THR D 293 LYS D 302 1 10 HELIX 64 64 PRO D 312 ASN D 317 1 6 SHEET 1 A 2 ASP A 7 LYS A 9 0 SHEET 2 A 2 LEU A 15 PRO A 17 -1 O MET A 16 N ILE A 8 SHEET 1 B 8 PHE A 21 GLY A 22 0 SHEET 2 B 8 LEU A 45 ASP A 47 1 O LEU A 45 N PHE A 21 SHEET 3 B 8 PHE A 77 LEU A 82 1 O THR A 79 N PHE A 46 SHEET 4 B 8 VAL A 108 ILE A 113 1 O LEU A 112 N LEU A 82 SHEET 5 B 8 ILE A 163 SER A 169 1 O SER A 169 N ILE A 113 SHEET 6 B 8 VAL A 189 GLU A 193 1 O GLN A 191 N VAL A 168 SHEET 7 B 8 THR A 213 TYR A 217 1 O THR A 213 N LEU A 190 SHEET 8 B 8 ALA A 270 VAL A 271 1 O ALA A 270 N ALA A 216 SHEET 1 C 2 ASP B 7 LYS B 9 0 SHEET 2 C 2 LEU B 15 PRO B 17 -1 O MET B 16 N ILE B 8 SHEET 1 D 7 PHE B 21 GLY B 22 0 SHEET 2 D 7 LEU B 45 ASP B 47 1 O LEU B 45 N PHE B 21 SHEET 3 D 7 PHE B 77 LEU B 82 1 O THR B 79 N PHE B 46 SHEET 4 D 7 VAL B 108 ILE B 113 1 O LEU B 112 N LEU B 82 SHEET 5 D 7 ILE B 163 SER B 169 1 O SER B 169 N ILE B 113 SHEET 6 D 7 VAL B 189 GLU B 193 1 O VAL B 189 N VAL B 168 SHEET 7 D 7 THR B 213 TYR B 217 1 O THR B 213 N LEU B 190 SHEET 1 E 2 ASP C 7 LYS C 9 0 SHEET 2 E 2 LEU C 15 PRO C 17 -1 O MET C 16 N ILE C 8 SHEET 1 F 8 PHE C 21 GLY C 22 0 SHEET 2 F 8 LEU C 45 ASP C 47 1 O LEU C 45 N PHE C 21 SHEET 3 F 8 PHE C 77 LEU C 82 1 O THR C 79 N PHE C 46 SHEET 4 F 8 VAL C 108 ILE C 113 1 O LEU C 112 N LEU C 82 SHEET 5 F 8 ILE C 163 SER C 169 1 O SER C 169 N ILE C 113 SHEET 6 F 8 VAL C 189 GLU C 193 1 O VAL C 189 N VAL C 168 SHEET 7 F 8 THR C 213 TYR C 217 1 O THR C 213 N LEU C 190 SHEET 8 F 8 ALA C 270 VAL C 271 1 O ALA C 270 N ALA C 216 SHEET 1 G 2 ASP D 7 LYS D 9 0 SHEET 2 G 2 LEU D 15 PRO D 17 -1 O MET D 16 N ILE D 8 SHEET 1 H 7 PHE D 21 GLY D 22 0 SHEET 2 H 7 LEU D 45 ASP D 47 1 O LEU D 45 N PHE D 21 SHEET 3 H 7 PHE D 77 LEU D 82 1 O THR D 79 N PHE D 46 SHEET 4 H 7 VAL D 108 ILE D 113 1 O LEU D 112 N LEU D 82 SHEET 5 H 7 ILE D 163 SER D 169 1 O SER D 169 N ILE D 113 SHEET 6 H 7 VAL D 189 GLU D 193 1 O VAL D 189 N VAL D 168 SHEET 7 H 7 THR D 213 TYR D 217 1 O THR D 213 N LEU D 190 CISPEP 1 TYR A 128 PRO A 129 0 0.05 CISPEP 2 TYR B 128 PRO B 129 0 0.25 CISPEP 3 TYR C 128 PRO C 129 0 -0.52 CISPEP 4 TYR D 128 PRO D 129 0 -0.53 SITE 1 AC1 31 GLY A 22 CYS A 23 TRP A 24 ASP A 47 SITE 2 AC1 31 TYR A 52 LYS A 81 SER A 169 ASN A 170 SITE 3 AC1 31 GLN A 191 TYR A 217 SER A 218 SER A 219 SITE 4 AC1 31 PHE A 220 GLN A 223 SER A 224 PHE A 240 SITE 5 AC1 31 ALA A 257 ILE A 272 LYS A 274 SER A 275 SITE 6 AC1 31 ASN A 276 LEU A 277 ARG A 280 ASN A 284 SITE 7 AC1 31 ASN A 310 HOH A 974 HOH A1003 HOH A1036 SITE 8 AC1 31 HOH A1081 HOH A1089 HOH A1125 SITE 1 AC2 30 GLY B 22 CYS B 23 TRP B 24 ASP B 47 SITE 2 AC2 30 TYR B 52 LYS B 81 SER B 169 ASN B 170 SITE 3 AC2 30 GLN B 191 TYR B 217 SER B 218 SER B 219 SITE 4 AC2 30 PHE B 220 GLN B 223 SER B 224 PHE B 240 SITE 5 AC2 30 ALA B 257 ILE B 272 PRO B 273 LYS B 274 SITE 6 AC2 30 SER B 275 ASN B 276 ARG B 280 ASN B 284 SITE 7 AC2 30 ASN B 310 HOH B 966 HOH B 973 HOH B 987 SITE 8 AC2 30 HOH B1036 HOH B1045 SITE 1 AC3 31 HOH A1089 GLY C 22 CYS C 23 TRP C 24 SITE 2 AC3 31 ASP C 47 TYR C 52 LYS C 81 SER C 169 SITE 3 AC3 31 ASN C 170 GLN C 191 TYR C 217 SER C 218 SITE 4 AC3 31 SER C 219 PHE C 220 GLN C 223 SER C 224 SITE 5 AC3 31 PHE C 240 ALA C 257 ILE C 272 PRO C 273 SITE 6 AC3 31 LYS C 274 SER C 275 ASN C 276 LEU C 277 SITE 7 AC3 31 ARG C 280 ASN C 284 ASN C 310 HOH C 979 SITE 8 AC3 31 HOH C1018 HOH C1020 HOH C1035 SITE 1 AC4 30 GLY D 22 CYS D 23 TRP D 24 ASP D 47 SITE 2 AC4 30 TYR D 52 LYS D 81 SER D 169 ASN D 170 SITE 3 AC4 30 GLN D 191 TYR D 217 SER D 218 SER D 219 SITE 4 AC4 30 PHE D 220 GLN D 223 SER D 224 PHE D 240 SITE 5 AC4 30 ALA D 257 ILE D 272 PRO D 273 LYS D 274 SITE 6 AC4 30 SER D 275 ASN D 276 ARG D 280 ASN D 284 SITE 7 AC4 30 ASN D 310 HOH D 967 HOH D 971 HOH D 981 SITE 8 AC4 30 HOH D1011 HOH D1195 CRYST1 179.980 129.089 79.872 90.00 90.82 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005556 0.000000 0.000080 0.00000 SCALE2 0.000000 0.007747 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012521 0.00000