data_1R3G
# 
_entry.id   1R3G 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.386 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1R3G         pdb_00001r3g 10.2210/pdb1r3g/pdb 
NDB   AD0031       ?            ?                   
RCSB  RCSB020389   ?            ?                   
WWPDB D_1000020389 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2003-10-21 
2 'Structure model' 1 1 2008-01-08 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom         
2 4 'Structure model' chem_comp_bond         
3 4 'Structure model' database_2             
4 4 'Structure model' pdbx_struct_conn_angle 
5 4 'Structure model' struct_conn            
6 4 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                      
2  4 'Structure model' '_database_2.pdbx_database_accession'       
3  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 
5  4 'Structure model' '_pdbx_struct_conn_angle.value'             
6  4 'Structure model' '_struct_conn.pdbx_dist_value'              
7  4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'       
8  4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'            
9  4 'Structure model' '_struct_site.pdbx_auth_asym_id'            
10 4 'Structure model' '_struct_site.pdbx_auth_comp_id'            
11 4 'Structure model' '_struct_site.pdbx_auth_seq_id'             
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1R3G 
_pdbx_database_status.recvd_initial_deposition_date   2003-10-01 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Prakash, T.P.' 1 
'Puschl, A.'    2 
'Lesnik, E.'    3 
'Tereshko, V.'  4 
'Egli, M.'      5 
'Manoharan, M.' 6 
# 
_citation.id                        primary 
_citation.title                     
;2'-O-[2-(Guanidinium)ethyl]-Modified Oligonucleotides: Stabilizing Effect on Duplex and Triplex Structures.
;
_citation.journal_abbrev            Org.Lett. 
_citation.journal_volume            6 
_citation.page_first                1971 
_citation.page_last                 1974 
_citation.year                      2004 
_citation.journal_id_ASTM           ? 
_citation.country                   US 
_citation.journal_id_ISSN           1523-7060 
_citation.journal_id_CSD            ? 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   15176796 
_citation.pdbx_database_id_DOI      10.1021/ol0493249 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Prakash, T.P.' 1 ? 
primary 'Lesnik, E.'    2 ? 
primary 'Mohan, V.'     3 ? 
primary 'Tereshko, V.'  4 ? 
primary 'Egli, M.'      5 ? 
primary 'Manoharan, M.' 6 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*GP*CP*GP*TP*AP*(GMU)P*AP*CP*GP*C)-3')" 3148.129 2   ? ? ? ? 
2 non-polymer syn 'MAGNESIUM ION'                               24.305   1   ? ? ? ? 
3 water       nat water                                         18.015   153 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DC)(DG)(DT)(DA)(GMU)(DA)(DC)(DG)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GCGTAUACGC 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'MAGNESIUM ION' MG  
3 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG  n 
1 2  DC  n 
1 3  DG  n 
1 4  DT  n 
1 5  DA  n 
1 6  GMU n 
1 7  DA  n 
1 8  DC  n 
1 9  DG  n 
1 10 DC  n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                           ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                            ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                           ? 'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                                   ? 'C10 H15 N2 O8 P' 322.208 
GMU 'RNA linking' n 
;2'-O-[(2-GUANIDINIUM)ETHYL]-5-METHYLURIDINE 5'-MONOPHOSPHATE
;
? 'C13 H24 N5 O9 P' 425.332 
HOH non-polymer   . WATER                                                          ? 'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'                                                ? 'Mg 2'            24.305  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG  1  1  1  DG  G   A . n 
A 1 2  DC  2  2  2  DC  C   A . n 
A 1 3  DG  3  3  3  DG  G   A . n 
A 1 4  DT  4  4  4  DT  T   A . n 
A 1 5  DA  5  5  5  DA  A   A . n 
A 1 6  GMU 6  6  6  GMU THG A . n 
A 1 7  DA  7  7  7  DA  A   A . n 
A 1 8  DC  8  8  8  DC  C   A . n 
A 1 9  DG  9  9  9  DG  G   A . n 
A 1 10 DC  10 10 10 DC  C   A . n 
B 1 1  DG  1  11 11 DG  G   B . n 
B 1 2  DC  2  12 12 DC  C   B . n 
B 1 3  DG  3  13 13 DG  G   B . n 
B 1 4  DT  4  14 14 DT  T   B . n 
B 1 5  DA  5  15 15 DA  A   B . n 
B 1 6  GMU 6  16 16 GMU THG B . n 
B 1 7  DA  7  17 17 DA  A   B . n 
B 1 8  DC  8  18 18 DC  C   B . n 
B 1 9  DG  9  19 19 DG  G   B . n 
B 1 10 DC  10 20 20 DC  C   B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 MG  1  101 101 MG  MG  A . 
D 3 HOH 1  102 102 HOH HOH A . 
D 3 HOH 2  104 104 HOH HOH A . 
D 3 HOH 3  105 105 HOH HOH A . 
D 3 HOH 4  106 106 HOH HOH A . 
D 3 HOH 5  202 202 HOH HOH A . 
D 3 HOH 6  205 205 HOH HOH A . 
D 3 HOH 7  206 206 HOH HOH A . 
D 3 HOH 8  207 207 HOH HOH A . 
D 3 HOH 9  208 208 HOH HOH A . 
D 3 HOH 10 209 209 HOH HOH A . 
D 3 HOH 11 210 210 HOH HOH A . 
D 3 HOH 12 211 211 HOH HOH A . 
D 3 HOH 13 212 212 HOH HOH A . 
D 3 HOH 14 215 215 HOH HOH A . 
D 3 HOH 15 217 217 HOH HOH A . 
D 3 HOH 16 218 218 HOH HOH A . 
D 3 HOH 17 219 219 HOH HOH A . 
D 3 HOH 18 226 226 HOH HOH A . 
D 3 HOH 19 229 229 HOH HOH A . 
D 3 HOH 20 230 230 HOH HOH A . 
D 3 HOH 21 232 232 HOH HOH A . 
D 3 HOH 22 234 234 HOH HOH A . 
D 3 HOH 23 237 237 HOH HOH A . 
D 3 HOH 24 238 238 HOH HOH A . 
D 3 HOH 25 239 239 HOH HOH A . 
D 3 HOH 26 240 240 HOH HOH A . 
D 3 HOH 27 241 241 HOH HOH A . 
D 3 HOH 28 246 246 HOH HOH A . 
D 3 HOH 29 247 247 HOH HOH A . 
D 3 HOH 30 248 248 HOH HOH A . 
D 3 HOH 31 249 249 HOH HOH A . 
D 3 HOH 32 250 250 HOH HOH A . 
D 3 HOH 33 251 251 HOH HOH A . 
D 3 HOH 34 252 252 HOH HOH A . 
D 3 HOH 35 254 254 HOH HOH A . 
D 3 HOH 36 255 255 HOH HOH A . 
D 3 HOH 37 257 257 HOH HOH A . 
D 3 HOH 38 261 261 HOH HOH A . 
D 3 HOH 39 263 263 HOH HOH A . 
D 3 HOH 40 265 265 HOH HOH A . 
D 3 HOH 41 267 267 HOH HOH A . 
D 3 HOH 42 269 269 HOH HOH A . 
D 3 HOH 43 280 280 HOH HOH A . 
D 3 HOH 44 281 281 HOH HOH A . 
D 3 HOH 45 282 282 HOH HOH A . 
D 3 HOH 46 287 287 HOH HOH A . 
D 3 HOH 47 288 288 HOH HOH A . 
D 3 HOH 48 289 289 HOH HOH A . 
D 3 HOH 49 290 290 HOH HOH A . 
D 3 HOH 50 294 294 HOH HOH A . 
D 3 HOH 51 296 296 HOH HOH A . 
D 3 HOH 52 299 299 HOH HOH A . 
D 3 HOH 53 301 301 HOH HOH A . 
D 3 HOH 54 302 302 HOH HOH A . 
D 3 HOH 55 304 304 HOH HOH A . 
D 3 HOH 56 305 305 HOH HOH A . 
D 3 HOH 57 307 307 HOH HOH A . 
D 3 HOH 58 309 309 HOH HOH A . 
D 3 HOH 59 310 310 HOH HOH A . 
D 3 HOH 60 311 311 HOH HOH A . 
D 3 HOH 61 314 314 HOH HOH A . 
D 3 HOH 62 316 316 HOH HOH A . 
D 3 HOH 63 321 321 HOH HOH A . 
D 3 HOH 64 322 322 HOH HOH A . 
D 3 HOH 65 323 323 HOH HOH A . 
D 3 HOH 66 325 325 HOH HOH A . 
D 3 HOH 67 326 326 HOH HOH A . 
D 3 HOH 68 327 327 HOH HOH A . 
D 3 HOH 69 328 328 HOH HOH A . 
D 3 HOH 70 329 329 HOH HOH A . 
D 3 HOH 71 330 330 HOH HOH A . 
D 3 HOH 72 331 331 HOH HOH A . 
D 3 HOH 73 332 332 HOH HOH A . 
D 3 HOH 74 335 335 HOH HOH A . 
D 3 HOH 75 336 336 HOH HOH A . 
D 3 HOH 76 338 338 HOH HOH A . 
D 3 HOH 77 345 345 HOH HOH A . 
D 3 HOH 78 346 346 HOH HOH A . 
D 3 HOH 79 347 347 HOH HOH A . 
D 3 HOH 80 352 352 HOH HOH A . 
E 3 HOH 1  103 103 HOH HOH B . 
E 3 HOH 2  107 107 HOH HOH B . 
E 3 HOH 3  201 201 HOH HOH B . 
E 3 HOH 4  203 203 HOH HOH B . 
E 3 HOH 5  204 204 HOH HOH B . 
E 3 HOH 6  213 213 HOH HOH B . 
E 3 HOH 7  214 214 HOH HOH B . 
E 3 HOH 8  216 216 HOH HOH B . 
E 3 HOH 9  220 220 HOH HOH B . 
E 3 HOH 10 221 221 HOH HOH B . 
E 3 HOH 11 222 222 HOH HOH B . 
E 3 HOH 12 223 223 HOH HOH B . 
E 3 HOH 13 224 224 HOH HOH B . 
E 3 HOH 14 225 225 HOH HOH B . 
E 3 HOH 15 227 227 HOH HOH B . 
E 3 HOH 16 228 228 HOH HOH B . 
E 3 HOH 17 231 231 HOH HOH B . 
E 3 HOH 18 233 233 HOH HOH B . 
E 3 HOH 19 235 235 HOH HOH B . 
E 3 HOH 20 236 236 HOH HOH B . 
E 3 HOH 21 242 242 HOH HOH B . 
E 3 HOH 22 243 243 HOH HOH B . 
E 3 HOH 23 244 244 HOH HOH B . 
E 3 HOH 24 245 245 HOH HOH B . 
E 3 HOH 25 253 253 HOH HOH B . 
E 3 HOH 26 256 256 HOH HOH B . 
E 3 HOH 27 258 258 HOH HOH B . 
E 3 HOH 28 259 259 HOH HOH B . 
E 3 HOH 29 260 260 HOH HOH B . 
E 3 HOH 30 262 262 HOH HOH B . 
E 3 HOH 31 264 264 HOH HOH B . 
E 3 HOH 32 266 266 HOH HOH B . 
E 3 HOH 33 268 268 HOH HOH B . 
E 3 HOH 34 270 270 HOH HOH B . 
E 3 HOH 35 273 273 HOH HOH B . 
E 3 HOH 36 275 275 HOH HOH B . 
E 3 HOH 37 277 277 HOH HOH B . 
E 3 HOH 38 278 278 HOH HOH B . 
E 3 HOH 39 283 283 HOH HOH B . 
E 3 HOH 40 284 284 HOH HOH B . 
E 3 HOH 41 285 285 HOH HOH B . 
E 3 HOH 42 286 286 HOH HOH B . 
E 3 HOH 43 291 291 HOH HOH B . 
E 3 HOH 44 292 292 HOH HOH B . 
E 3 HOH 45 293 293 HOH HOH B . 
E 3 HOH 46 295 295 HOH HOH B . 
E 3 HOH 47 297 297 HOH HOH B . 
E 3 HOH 48 298 298 HOH HOH B . 
E 3 HOH 49 300 300 HOH HOH B . 
E 3 HOH 50 303 303 HOH HOH B . 
E 3 HOH 51 306 306 HOH HOH B . 
E 3 HOH 52 308 308 HOH HOH B . 
E 3 HOH 53 312 312 HOH HOH B . 
E 3 HOH 54 313 313 HOH HOH B . 
E 3 HOH 55 315 315 HOH HOH B . 
E 3 HOH 56 317 317 HOH HOH B . 
E 3 HOH 57 318 318 HOH HOH B . 
E 3 HOH 58 319 319 HOH HOH B . 
E 3 HOH 59 320 320 HOH HOH B . 
E 3 HOH 60 324 324 HOH HOH B . 
E 3 HOH 61 333 333 HOH HOH B . 
E 3 HOH 62 334 334 HOH HOH B . 
E 3 HOH 63 337 337 HOH HOH B . 
E 3 HOH 64 339 339 HOH HOH B . 
E 3 HOH 65 340 340 HOH HOH B . 
E 3 HOH 66 341 341 HOH HOH B . 
E 3 HOH 67 342 342 HOH HOH B . 
E 3 HOH 68 343 343 HOH HOH B . 
E 3 HOH 69 344 344 HOH HOH B . 
E 3 HOH 70 348 348 HOH HOH B . 
E 3 HOH 71 349 349 HOH HOH B . 
E 3 HOH 72 350 350 HOH HOH B . 
E 3 HOH 73 351 351 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
REFMAC    refinement       5.1.9999 ? 1 
DENZO     'data reduction' .        ? 2 
SCALEPACK 'data scaling'   .        ? 3 
AMoRE     phasing          .        ? 4 
# 
_cell.entry_id           1R3G 
_cell.length_a           25.111 
_cell.length_b           43.151 
_cell.length_c           45.558 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         1R3G 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          1R3G 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      1.88 
_exptl_crystal.density_percent_sol   34.70 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          ? 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              ? 
_exptl_crystal_grow.pdbx_details    'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.pdbx_pH_range   . 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100.0 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   1999-01-01 
_diffrn_detector.details                MIRRORS 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.000 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'APS BEAMLINE 5ID-B' 
_diffrn_source.pdbx_synchrotron_site       APS 
_diffrn_source.pdbx_synchrotron_beamline   5ID-B 
_diffrn_source.pdbx_wavelength             1.000 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     1R3G 
_reflns.observed_criterion_sigma_I   0.00 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             19.500 
_reflns.d_resolution_high            1.160 
_reflns.number_obs                   17426 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         97.4 
_reflns.pdbx_Rmerge_I_obs            0.06 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              5.00 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 1R3G 
_refine.ls_number_reflns_obs                     16535 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.00 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             20.00 
_refine.ls_d_res_high                            1.16 
_refine.ls_percent_reflns_obs                    97.4 
_refine.ls_R_factor_obs                          0.134 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.132 
_refine.ls_R_factor_R_free                       0.174 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 5.100 
_refine.ls_number_reflns_R_free                  891 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.984 
_refine.correlation_coeff_Fo_to_Fc_free          0.974 
_refine.B_iso_mean                               16.67 
_refine.aniso_B[1][1]                            0.29000 
_refine.aniso_B[2][2]                            0.15000 
_refine.aniso_B[3][3]                            -0.44000 
_refine.aniso_B[1][2]                            0.00000 
_refine.aniso_B[1][3]                            0.00000 
_refine.aniso_B[2][3]                            0.00000 
_refine.solvent_model_details                    'BABINET MODEL WITH MASK' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       0.035 
_refine.pdbx_overall_ESU_R_Free                  0.039 
_refine.overall_SU_ML                            0.023 
_refine.overall_SU_B                             1.117 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_overall_phase_error                 ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   418 
_refine_hist.pdbx_number_atoms_ligand         1 
_refine_hist.number_atoms_solvent             156 
_refine_hist.number_atoms_total               575 
_refine_hist.d_res_high                       1.16 
_refine_hist.d_res_low                        20.00 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
r_bond_refined_d         0.020  0.021 ? 466 'X-RAY DIFFRACTION' ? 
r_bond_other_d           0.009  0.020 ? 194 'X-RAY DIFFRACTION' ? 
r_angle_refined_deg      1.982  2.112 ? 716 'X-RAY DIFFRACTION' ? 
r_angle_other_deg        1.267  2.004 ? 486 'X-RAY DIFFRACTION' ? 
r_dihedral_angle_1_deg   ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_2_deg   ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_3_deg   ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_4_deg   ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_chiral_restr           0.107  0.200 ? 80  'X-RAY DIFFRACTION' ? 
r_gen_planes_refined     0.031  0.020 ? 216 'X-RAY DIFFRACTION' ? 
r_gen_planes_other       ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_nbd_refined            0.179  0.200 ? 70  'X-RAY DIFFRACTION' ? 
r_nbd_other              0.239  0.200 ? 200 'X-RAY DIFFRACTION' ? 
r_nbtor_refined          ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_nbtor_other            0.074  0.200 ? 81  'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_refined    0.347  0.200 ? 117 'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_other      0.000  0.200 ? 1   'X-RAY DIFFRACTION' ? 
r_metal_ion_refined      ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_metal_ion_other        ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_refined   0.248  0.200 ? 5   'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_other     0.182  0.200 ? 44  'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_refined 0.298  0.200 ? 15  'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_other   ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_mcbond_it              ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_mcangle_it             ?      ?     ? ?   'X-RAY DIFFRACTION' ? 
r_scbond_it              3.047  3.000 ? 668 'X-RAY DIFFRACTION' ? 
r_scangle_it             3.930  4.500 ? 712 'X-RAY DIFFRACTION' ? 
r_rigid_bond_restr       2.209  3.000 ? 668 'X-RAY DIFFRACTION' ? 
r_sphericity_free        11.381 3.000 ? 92  'X-RAY DIFFRACTION' ? 
r_sphericity_bonded      7.752  3.000 ? 418 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.d_res_high                       1.16 
_refine_ls_shell.d_res_low                        1.19 
_refine_ls_shell.number_reflns_R_work             1136 
_refine_ls_shell.R_factor_R_work                  0.18 
_refine_ls_shell.percent_reflns_obs               ? 
_refine_ls_shell.R_factor_R_free                  0.246 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             69 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.R_factor_all                     ? 
# 
_database_PDB_matrix.entry_id          1R3G 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1R3G 
_struct.title                     
;1.16A X-ray structure of the synthetic DNA fragment with the incorporated 2'-O-[(2-Guanidinium)ethyl]-5-methyluridine residues
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1R3G 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            DNA 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 3 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1R3G 
_struct_ref.pdbx_db_accession          1R3G 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1R3G A 1 ? 10 ? 1R3G 1  ? 10 ? 1  10 
2 1 1R3G B 1 ? 10 ? 1R3G 11 ? 20 ? 11 20 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DA  5  "O3'" ? ? ? 1_555 A GMU 6  P  ? ? A DA  5   A GMU 6   1_555 ? ? ? ? ? ? ?            1.613 ? ? 
covale2  covale one  ? A GMU 6  "O3'" ? ? ? 1_555 A DA  7  P  ? ? A GMU 6   A DA  7   1_555 ? ? ? ? ? ? ?            1.620 ? ? 
covale3  covale both ? B DA  5  "O3'" ? ? ? 1_555 B GMU 6  P  ? ? B DA  15  B GMU 16  1_555 ? ? ? ? ? ? ?            1.607 ? ? 
covale4  covale one  ? B GMU 6  "O3'" ? ? ? 1_555 B DA  7  P  ? ? B GMU 16  B DA  17  1_555 ? ? ? ? ? ? ?            1.603 ? ? 
metalc1  metalc ?    ? C MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  101 A HOH 102 1_555 ? ? ? ? ? ? ?            1.941 ? ? 
metalc2  metalc ?    ? C MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  101 A HOH 104 1_555 ? ? ? ? ? ? ?            2.239 ? ? 
metalc3  metalc ?    ? C MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  101 A HOH 105 1_555 ? ? ? ? ? ? ?            1.970 ? ? 
metalc4  metalc ?    ? C MG  .  MG    ? ? ? 1_555 D HOH .  O  ? ? A MG  101 A HOH 106 1_555 ? ? ? ? ? ? ?            2.212 ? ? 
metalc5  metalc ?    ? C MG  .  MG    ? ? ? 1_555 E HOH .  O  ? ? A MG  101 B HOH 103 1_555 ? ? ? ? ? ? ?            1.961 ? ? 
metalc6  metalc ?    ? C MG  .  MG    ? ? ? 1_555 E HOH .  O  ? ? A MG  101 B HOH 107 1_555 ? ? ? ? ? ? ?            1.936 ? ? 
hydrog1  hydrog ?    ? A DG  1  N1    ? ? ? 1_555 B DC  10 N3 ? ? A DG  1   B DC  20  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DG  1  N2    ? ? ? 1_555 B DC  10 O2 ? ? A DG  1   B DC  20  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DG  1  O6    ? ? ? 1_555 B DC  10 N4 ? ? A DG  1   B DC  20  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DC  2  N3    ? ? ? 1_555 B DG  9  N1 ? ? A DC  2   B DG  19  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DC  2  N4    ? ? ? 1_555 B DG  9  O6 ? ? A DC  2   B DG  19  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DC  2  O2    ? ? ? 1_555 B DG  9  N2 ? ? A DC  2   B DG  19  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DG  3  N1    ? ? ? 1_555 B DC  8  N3 ? ? A DG  3   B DC  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DG  3  N2    ? ? ? 1_555 B DC  8  O2 ? ? A DG  3   B DC  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DG  3  O6    ? ? ? 1_555 B DC  8  N4 ? ? A DG  3   B DC  18  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DT  4  N3    ? ? ? 1_555 B DA  7  N1 ? ? A DT  4   B DA  17  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DT  4  O4    ? ? ? 1_555 B DA  7  N6 ? ? A DT  4   B DA  17  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DA  5  N1    ? ? ? 1_555 B GMU 6  N3 ? ? A DA  5   B GMU 16  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DA  5  N6    ? ? ? 1_555 B GMU 6  O4 ? ? A DA  5   B GMU 16  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A GMU 6  N3    ? ? ? 1_555 B DA  5  N1 ? ? A GMU 6   B DA  15  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A GMU 6  O4    ? ? ? 1_555 B DA  5  N6 ? ? A GMU 6   B DA  15  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DA  7  N1    ? ? ? 1_555 B DT  4  N3 ? ? A DA  7   B DT  14  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DA  7  N6    ? ? ? 1_555 B DT  4  O4 ? ? A DA  7   B DT  14  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  8  N3    ? ? ? 1_555 B DG  3  N1 ? ? A DC  8   B DG  13  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DC  8  N4    ? ? ? 1_555 B DG  3  O6 ? ? A DC  8   B DG  13  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DC  8  O2    ? ? ? 1_555 B DG  3  N2 ? ? A DC  8   B DG  13  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ?    ? A DG  9  N1    ? ? ? 1_555 B DC  2  N3 ? ? A DG  9   B DC  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ?    ? A DG  9  N2    ? ? ? 1_555 B DC  2  O2 ? ? A DG  9   B DC  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ?    ? A DG  9  O6    ? ? ? 1_555 B DC  2  N4 ? ? A DG  9   B DC  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ?    ? A DC  10 N3    ? ? ? 1_555 B DG  1  N1 ? ? A DC  10  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ?    ? A DC  10 N4    ? ? ? 1_555 B DG  1  O6 ? ? A DC  10  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ?    ? A DC  10 O2    ? ? ? 1_555 B DG  1  N2 ? ? A DC  10  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O ? D HOH . ? A HOH 102 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 104 ? 1_555 96.9  ? 
2  O ? D HOH . ? A HOH 102 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 105 ? 1_555 79.4  ? 
3  O ? D HOH . ? A HOH 104 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 105 ? 1_555 172.1 ? 
4  O ? D HOH . ? A HOH 102 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 106 ? 1_555 86.6  ? 
5  O ? D HOH . ? A HOH 104 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 106 ? 1_555 100.9 ? 
6  O ? D HOH . ? A HOH 105 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 106 ? 1_555 72.0  ? 
7  O ? D HOH . ? A HOH 102 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 103 ? 1_555 168.6 ? 
8  O ? D HOH . ? A HOH 104 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 103 ? 1_555 89.3  ? 
9  O ? D HOH . ? A HOH 105 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 103 ? 1_555 93.2  ? 
10 O ? D HOH . ? A HOH 106 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 103 ? 1_555 82.8  ? 
11 O ? D HOH . ? A HOH 102 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 107 ? 1_555 97.9  ? 
12 O ? D HOH . ? A HOH 104 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 107 ? 1_555 89.2  ? 
13 O ? D HOH . ? A HOH 105 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 107 ? 1_555 98.2  ? 
14 O ? D HOH . ? A HOH 106 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 107 ? 1_555 168.4 ? 
15 O ? E HOH . ? B HOH 103 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? E HOH . ? B HOH 107 ? 1_555 91.7  ? 
# 
_struct_site.id                   AC1 
_struct_site.pdbx_evidence_code   Software 
_struct_site.pdbx_auth_asym_id    A 
_struct_site.pdbx_auth_comp_id    MG 
_struct_site.pdbx_auth_seq_id     101 
_struct_site.pdbx_auth_ins_code   ? 
_struct_site.pdbx_num_residues    6 
_struct_site.details              'BINDING SITE FOR RESIDUE MG A 101' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 6 HOH D . ? HOH A 102 . ? 1_555 ? 
2 AC1 6 HOH D . ? HOH A 104 . ? 1_555 ? 
3 AC1 6 HOH D . ? HOH A 105 . ? 1_555 ? 
4 AC1 6 HOH D . ? HOH A 106 . ? 1_555 ? 
5 AC1 6 HOH E . ? HOH B 103 . ? 1_555 ? 
6 AC1 6 HOH E . ? HOH B 107 . ? 1_555 ? 
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   O 
_pdbx_validate_close_contact.auth_asym_id_1   A 
_pdbx_validate_close_contact.auth_comp_id_1   HOH 
_pdbx_validate_close_contact.auth_seq_id_1    238 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   O 
_pdbx_validate_close_contact.auth_asym_id_2   A 
_pdbx_validate_close_contact.auth_comp_id_2   HOH 
_pdbx_validate_close_contact.auth_seq_id_2    267 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             2.15 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 P     B DC 12 ? ? "O5'" B DC 12 ? ? 1.533 1.593 -0.060 0.010 N 
2 1 "O3'" B DC 12 ? ? "C3'" B DC 12 ? ? 1.345 1.419 -0.074 0.006 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 102.07 104.50 -2.43 0.40 N 
2 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9    B DG 11 ? ? 115.26 108.30 6.96  0.30 N 
3 1 C8    B DG 11 ? ? N9    B DG 11 ? ? C4    B DG 11 ? ? 103.07 106.40 -3.33 0.40 N 
4 1 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 97.45  102.20 -4.75 0.70 N 
5 1 N1    B DA 15 ? ? C2    B DA 15 ? ? N3    B DA 15 ? ? 125.68 129.30 -3.62 0.50 N 
6 1 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9    B DG 19 ? ? 110.20 108.30 1.90  0.30 N 
# 
_pdbx_validate_planes.id              1 
_pdbx_validate_planes.PDB_model_num   1 
_pdbx_validate_planes.auth_comp_id    DG 
_pdbx_validate_planes.auth_asym_id    B 
_pdbx_validate_planes.auth_seq_id     19 
_pdbx_validate_planes.PDB_ins_code    ? 
_pdbx_validate_planes.label_alt_id    ? 
_pdbx_validate_planes.rmsd            0.059 
_pdbx_validate_planes.type            'SIDE CHAIN' 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A GMU 6 A GMU 6  ? DU ? 
2 B GMU 6 B GMU 16 ? DU ? 
# 
_pdbx_refine_tls.id               1 
_pdbx_refine_tls.details          ? 
_pdbx_refine_tls.method           refined 
_pdbx_refine_tls.origin_x         3.1610 
_pdbx_refine_tls.origin_y         1.9710 
_pdbx_refine_tls.origin_z         11.2670 
_pdbx_refine_tls.T[1][1]          -0.0094 
_pdbx_refine_tls.T[2][2]          0.0022 
_pdbx_refine_tls.T[3][3]          -0.0094 
_pdbx_refine_tls.T[1][2]          -0.0076 
_pdbx_refine_tls.T[1][3]          0.0030 
_pdbx_refine_tls.T[2][3]          0.0063 
_pdbx_refine_tls.L[1][1]          0.0216 
_pdbx_refine_tls.L[2][2]          1.7930 
_pdbx_refine_tls.L[3][3]          0.9385 
_pdbx_refine_tls.L[1][2]          -0.0828 
_pdbx_refine_tls.L[1][3]          0.0694 
_pdbx_refine_tls.L[2][3]          0.7607 
_pdbx_refine_tls.S[1][1]          0.0287 
_pdbx_refine_tls.S[1][2]          0.0480 
_pdbx_refine_tls.S[1][3]          -0.0098 
_pdbx_refine_tls.S[2][1]          0.0730 
_pdbx_refine_tls.S[2][2]          -0.0280 
_pdbx_refine_tls.S[2][3]          -0.0443 
_pdbx_refine_tls.S[3][1]          0.0465 
_pdbx_refine_tls.S[3][2]          0.0023 
_pdbx_refine_tls.S[3][3]          -0.0008 
_pdbx_refine_tls.pdbx_refine_id   'X-RAY DIFFRACTION' 
# 
_pdbx_refine_tls_group.id                  1 
_pdbx_refine_tls_group.refine_tls_id       1 
_pdbx_refine_tls_group.beg_label_asym_id   . 
_pdbx_refine_tls_group.beg_label_seq_id    . 
_pdbx_refine_tls_group.beg_auth_seq_id     1 
_pdbx_refine_tls_group.end_label_asym_id   . 
_pdbx_refine_tls_group.end_label_seq_id    . 
_pdbx_refine_tls_group.end_auth_seq_id     351 
_pdbx_refine_tls_group.selection           ? 
_pdbx_refine_tls_group.beg_auth_asym_id    A 
_pdbx_refine_tls_group.end_auth_asym_id    B 
_pdbx_refine_tls_group.pdbx_refine_id      'X-RAY DIFFRACTION' 
_pdbx_refine_tls_group.selection_details   ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O  N N 1   
DA  P      P  N N 2   
DA  OP1    O  N N 3   
DA  OP2    O  N N 4   
DA  "O5'"  O  N N 5   
DA  "C5'"  C  N N 6   
DA  "C4'"  C  N R 7   
DA  "O4'"  O  N N 8   
DA  "C3'"  C  N S 9   
DA  "O3'"  O  N N 10  
DA  "C2'"  C  N N 11  
DA  "C1'"  C  N R 12  
DA  N9     N  Y N 13  
DA  C8     C  Y N 14  
DA  N7     N  Y N 15  
DA  C5     C  Y N 16  
DA  C6     C  Y N 17  
DA  N6     N  N N 18  
DA  N1     N  Y N 19  
DA  C2     C  Y N 20  
DA  N3     N  Y N 21  
DA  C4     C  Y N 22  
DA  HOP3   H  N N 23  
DA  HOP2   H  N N 24  
DA  "H5'"  H  N N 25  
DA  "H5''" H  N N 26  
DA  "H4'"  H  N N 27  
DA  "H3'"  H  N N 28  
DA  "HO3'" H  N N 29  
DA  "H2'"  H  N N 30  
DA  "H2''" H  N N 31  
DA  "H1'"  H  N N 32  
DA  H8     H  N N 33  
DA  H61    H  N N 34  
DA  H62    H  N N 35  
DA  H2     H  N N 36  
DC  OP3    O  N N 37  
DC  P      P  N N 38  
DC  OP1    O  N N 39  
DC  OP2    O  N N 40  
DC  "O5'"  O  N N 41  
DC  "C5'"  C  N N 42  
DC  "C4'"  C  N R 43  
DC  "O4'"  O  N N 44  
DC  "C3'"  C  N S 45  
DC  "O3'"  O  N N 46  
DC  "C2'"  C  N N 47  
DC  "C1'"  C  N R 48  
DC  N1     N  N N 49  
DC  C2     C  N N 50  
DC  O2     O  N N 51  
DC  N3     N  N N 52  
DC  C4     C  N N 53  
DC  N4     N  N N 54  
DC  C5     C  N N 55  
DC  C6     C  N N 56  
DC  HOP3   H  N N 57  
DC  HOP2   H  N N 58  
DC  "H5'"  H  N N 59  
DC  "H5''" H  N N 60  
DC  "H4'"  H  N N 61  
DC  "H3'"  H  N N 62  
DC  "HO3'" H  N N 63  
DC  "H2'"  H  N N 64  
DC  "H2''" H  N N 65  
DC  "H1'"  H  N N 66  
DC  H41    H  N N 67  
DC  H42    H  N N 68  
DC  H5     H  N N 69  
DC  H6     H  N N 70  
DG  OP3    O  N N 71  
DG  P      P  N N 72  
DG  OP1    O  N N 73  
DG  OP2    O  N N 74  
DG  "O5'"  O  N N 75  
DG  "C5'"  C  N N 76  
DG  "C4'"  C  N R 77  
DG  "O4'"  O  N N 78  
DG  "C3'"  C  N S 79  
DG  "O3'"  O  N N 80  
DG  "C2'"  C  N N 81  
DG  "C1'"  C  N R 82  
DG  N9     N  Y N 83  
DG  C8     C  Y N 84  
DG  N7     N  Y N 85  
DG  C5     C  Y N 86  
DG  C6     C  N N 87  
DG  O6     O  N N 88  
DG  N1     N  N N 89  
DG  C2     C  N N 90  
DG  N2     N  N N 91  
DG  N3     N  N N 92  
DG  C4     C  Y N 93  
DG  HOP3   H  N N 94  
DG  HOP2   H  N N 95  
DG  "H5'"  H  N N 96  
DG  "H5''" H  N N 97  
DG  "H4'"  H  N N 98  
DG  "H3'"  H  N N 99  
DG  "HO3'" H  N N 100 
DG  "H2'"  H  N N 101 
DG  "H2''" H  N N 102 
DG  "H1'"  H  N N 103 
DG  H8     H  N N 104 
DG  H1     H  N N 105 
DG  H21    H  N N 106 
DG  H22    H  N N 107 
DT  OP3    O  N N 108 
DT  P      P  N N 109 
DT  OP1    O  N N 110 
DT  OP2    O  N N 111 
DT  "O5'"  O  N N 112 
DT  "C5'"  C  N N 113 
DT  "C4'"  C  N R 114 
DT  "O4'"  O  N N 115 
DT  "C3'"  C  N S 116 
DT  "O3'"  O  N N 117 
DT  "C2'"  C  N N 118 
DT  "C1'"  C  N R 119 
DT  N1     N  N N 120 
DT  C2     C  N N 121 
DT  O2     O  N N 122 
DT  N3     N  N N 123 
DT  C4     C  N N 124 
DT  O4     O  N N 125 
DT  C5     C  N N 126 
DT  C7     C  N N 127 
DT  C6     C  N N 128 
DT  HOP3   H  N N 129 
DT  HOP2   H  N N 130 
DT  "H5'"  H  N N 131 
DT  "H5''" H  N N 132 
DT  "H4'"  H  N N 133 
DT  "H3'"  H  N N 134 
DT  "HO3'" H  N N 135 
DT  "H2'"  H  N N 136 
DT  "H2''" H  N N 137 
DT  "H1'"  H  N N 138 
DT  H3     H  N N 139 
DT  H71    H  N N 140 
DT  H72    H  N N 141 
DT  H73    H  N N 142 
DT  H6     H  N N 143 
GMU OP3    O  N N 144 
GMU P      P  N N 145 
GMU OP2    O  N N 146 
GMU "O5'"  O  N N 147 
GMU "C5'"  C  N N 148 
GMU "C4'"  C  N R 149 
GMU "O4'"  O  N N 150 
GMU "C3'"  C  N R 151 
GMU "O3'"  O  N N 152 
GMU "C2'"  C  N R 153 
GMU "C1'"  C  N R 154 
GMU N1     N  N N 155 
GMU C2     C  N N 156 
GMU O2     O  N N 157 
GMU N3     N  N N 158 
GMU C6     C  N N 159 
GMU C5     C  N N 160 
GMU C5M    C  N N 161 
GMU C4     C  N N 162 
GMU O4     O  N N 163 
GMU "O2'"  O  N N 164 
GMU "CA'"  C  N N 165 
GMU "CB'"  C  N N 166 
GMU "NC'"  N  N N 167 
GMU "CD'"  C  N N 168 
GMU "NE'"  N  N N 169 
GMU "NF'"  N  N N 170 
GMU OP1    O  N N 171 
GMU H3P    H  N N 172 
GMU H2P    H  N N 173 
GMU "H5'"  H  N N 174 
GMU "H5''" H  N N 175 
GMU "H4'"  H  N N 176 
GMU H1     H  N N 177 
GMU "H3'"  H  N N 178 
GMU "H2'"  H  N N 179 
GMU "H1'"  H  N N 180 
GMU HN3    H  N N 181 
GMU H6     H  N N 182 
GMU H71    H  N N 183 
GMU H72    H  N N 184 
GMU H73    H  N N 185 
GMU "HA'1" H  N N 186 
GMU "HA'2" H  N N 187 
GMU "HB'1" H  N N 188 
GMU "HB'2" H  N N 189 
GMU "HC'"  H  N N 190 
GMU "HD'"  H  N N 191 
GMU "HE'1" H  N N 192 
GMU "HE'2" H  N N 193 
GMU "HF'1" H  N N 194 
GMU "HF'2" H  N N 195 
HOH O      O  N N 196 
HOH H1     H  N N 197 
HOH H2     H  N N 198 
MG  MG     MG N N 199 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
GMU OP3   P      sing N N 150 
GMU OP3   H3P    sing N N 151 
GMU P     OP2    sing N N 152 
GMU P     "O5'"  sing N N 153 
GMU P     OP1    doub N N 154 
GMU OP2   H2P    sing N N 155 
GMU "O5'" "C5'"  sing N N 156 
GMU "C5'" "C4'"  sing N N 157 
GMU "C5'" "H5'"  sing N N 158 
GMU "C5'" "H5''" sing N N 159 
GMU "C4'" "O4'"  sing N N 160 
GMU "C4'" "C3'"  sing N N 161 
GMU "C4'" "H4'"  sing N N 162 
GMU "O4'" "C1'"  sing N N 163 
GMU "C3'" "O3'"  sing N N 164 
GMU "C3'" "C2'"  sing N N 165 
GMU "C3'" H1     sing N N 166 
GMU "O3'" "H3'"  sing N N 167 
GMU "C2'" "C1'"  sing N N 168 
GMU "C2'" "O2'"  sing N N 169 
GMU "C2'" "H2'"  sing N N 170 
GMU "C1'" N1     sing N N 171 
GMU "C1'" "H1'"  sing N N 172 
GMU N1    C2     sing N N 173 
GMU N1    C6     sing N N 174 
GMU C2    O2     doub N N 175 
GMU C2    N3     sing N N 176 
GMU N3    C4     sing N N 177 
GMU N3    HN3    sing N N 178 
GMU C6    C5     doub N N 179 
GMU C6    H6     sing N N 180 
GMU C5    C5M    sing N N 181 
GMU C5    C4     sing N N 182 
GMU C5M   H71    sing N N 183 
GMU C5M   H72    sing N N 184 
GMU C5M   H73    sing N N 185 
GMU C4    O4     doub N N 186 
GMU "O2'" "CA'"  sing N N 187 
GMU "CA'" "CB'"  sing N N 188 
GMU "CA'" "HA'1" sing N N 189 
GMU "CA'" "HA'2" sing N N 190 
GMU "CB'" "NC'"  sing N N 191 
GMU "CB'" "HB'1" sing N N 192 
GMU "CB'" "HB'2" sing N N 193 
GMU "NC'" "CD'"  sing N N 194 
GMU "NC'" "HC'"  sing N N 195 
GMU "CD'" "NE'"  sing N N 196 
GMU "CD'" "NF'"  sing N N 197 
GMU "CD'" "HD'"  sing N N 198 
GMU "NE'" "HE'1" sing N N 199 
GMU "NE'" "HE'2" sing N N 200 
GMU "NF'" "HF'1" sing N N 201 
GMU "NF'" "HF'2" sing N N 202 
HOH O     H1     sing N N 203 
HOH O     H2     sing N N 204 
# 
_ndb_struct_conf_na.entry_id   1R3G 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG  1  1_555 B DC  10 1_555 -0.318 -0.157 0.103  2.188  -6.377  -1.747 1  A_DG1:DC20_B  A 1  ? B 20 ? 19 1 
1 A DC  2  1_555 B DG  9  1_555 0.070  -0.111 0.042  4.937  -14.563 0.051  2  A_DC2:DG19_B  A 2  ? B 19 ? 19 1 
1 A DG  3  1_555 B DC  8  1_555 -0.277 -0.155 0.064  -7.196 -17.273 0.102  3  A_DG3:DC18_B  A 3  ? B 18 ? 19 1 
1 A DT  4  1_555 B DA  7  1_555 -0.125 -0.153 -0.016 -5.239 -17.867 -0.526 4  A_DT4:DA17_B  A 4  ? B 17 ? 20 1 
1 A DA  5  1_555 B GMU 6  1_555 0.150  -0.081 0.140  -4.062 -14.808 -5.074 5  A_DA5:GMU16_B A 5  ? B 16 ? 20 1 
1 A GMU 6  1_555 B DA  5  1_555 -0.074 -0.103 0.223  3.673  -14.026 4.479  6  A_GMU6:DA15_B A 6  ? B 15 ? 20 1 
1 A DA  7  1_555 B DT  4  1_555 0.052  -0.164 0.096  4.355  -12.445 1.239  7  A_DA7:DT14_B  A 7  ? B 14 ? 20 1 
1 A DC  8  1_555 B DG  3  1_555 0.195  -0.173 0.006  4.925  -14.272 -0.778 8  A_DC8:DG13_B  A 8  ? B 13 ? 19 1 
1 A DG  9  1_555 B DC  2  1_555 -0.135 -0.141 0.019  -5.179 -9.976  0.881  9  A_DG9:DC12_B  A 9  ? B 12 ? 19 1 
1 A DC  10 1_555 B DG  1  1_555 0.225  -0.143 0.057  -2.862 5.248   -0.700 10 A_DC10:DG11_B A 10 ? B 11 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG  1 1_555 B DC  10 1_555 A DC  2  1_555 B DG  9 1_555 0.398  -1.623 3.212 1.770  0.441  38.617 -2.505 -0.388 3.208 0.667  
-2.675 38.659 1 AA_DG1DC2:DG19DC20_BB   A 1 ? B 20 ? A 2  ? B 19 ? 
1 A DC  2 1_555 B DG  9  1_555 A DG  3  1_555 B DC  8 1_555 0.105  -2.072 3.409 0.228  12.207 27.143 -6.377 -0.162 2.286 24.497 
-0.458 29.715 2 AA_DC2DG3:DC18DG19_BB   A 2 ? B 19 ? A 3  ? B 18 ? 
1 A DG  3 1_555 B DC  8  1_555 A DT  4  1_555 B DA  7 1_555 -1.007 -1.372 3.104 -2.022 5.342  37.063 -2.785 1.320  2.934 8.343  
3.158  37.485 3 AA_DG3DT4:DA17DC18_BB   A 3 ? B 18 ? A 4  ? B 17 ? 
1 A DT  4 1_555 B DA  7  1_555 A DA  5  1_555 B GMU 6 1_555 0.710  -1.465 3.175 2.098  20.372 26.036 -5.463 -0.952 1.673 38.525 
-3.968 33.016 4 AA_DT4DA5:GMU16DA17_BB  A 4 ? B 17 ? A 5  ? B 16 ? 
1 A DA  5 1_555 B GMU 6  1_555 A GMU 6  1_555 B DA  5 1_555 0.835  -1.275 3.092 1.027  4.842  31.823 -3.095 -1.337 2.896 8.764  
-1.859 32.196 5 AA_DA5GMU6:DA15GMU16_BB A 5 ? B 16 ? A 6  ? B 15 ? 
1 A GMU 6 1_555 B DA  5  1_555 A DA  7  1_555 B DT  4 1_555 -0.075 -1.367 3.086 0.513  12.943 32.177 -4.026 0.195  2.375 22.258 
-0.883 34.622 6 AA_GMU6DA7:DT14DA15_BB  A 6 ? B 15 ? A 7  ? B 14 ? 
1 A DA  7 1_555 B DT  4  1_555 A DC  8  1_555 B DG  3 1_555 0.301  -1.839 3.317 1.318  4.101  31.972 -4.025 -0.311 3.074 7.403  
-2.379 32.253 7 AA_DA7DC8:DG13DT14_BB   A 7 ? B 14 ? A 8  ? B 13 ? 
1 A DC  8 1_555 B DG  3  1_555 A DG  9  1_555 B DC  2 1_555 -0.235 -1.937 3.412 0.608  11.845 26.195 -6.357 0.599  2.329 24.594 
-1.262 28.712 8 AA_DC8DG9:DC12DG13_BB   A 8 ? B 13 ? A 9  ? B 12 ? 
1 A DG  9 1_555 B DC  2  1_555 A DC  10 1_555 B DG  1 1_555 0.157  -1.565 3.386 1.569  -1.084 35.138 -2.420 -0.015 3.434 -1.793 
-2.596 35.188 9 AA_DG9DC10:DG11DC12_BB  A 9 ? B 12 ? A 10 ? B 11 ? 
# 
_atom_sites.entry_id                    1R3G 
_atom_sites.fract_transf_matrix[1][1]   0.039823 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.023174 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.021950 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
# 
loop_