HEADER OXIDOREDUCTASE 27-OCT-03 1R8K TITLE PDXA PROTEIN; NAD-DEPENDENT DEHYDROGENASE/CARBOXYLASE; SUBUNIT OF TITLE 2 PYRIDOXINE PHOSPHATE BIOSYNTHETIC PROTEIN PDXJ-PDXA [SALMONELLA TITLE 3 TYPHIMURIUM] COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXYTHREONINE-4-PHOSPHATE DEHYDROGENASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4-(PHOSPHOHYDROXY)-L-THREONINE DEHYDROGENASE 1, NAD- COMPND 5 DEPENDENT DEHYDROGENASE/CARBOXYLASE, PYRIDOXINE PHOSPHATE COMPND 6 BIOSYNTHETIC PROTEIN PDXJ-PDXA SUBUNIT, PDXA PROTEIN; COMPND 7 EC: 1.1.1.262; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 GENE: PDXA, STM0090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, NAD-DEPENDENT DEHYDROGENASE/CARBOXYLASE, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,P.QUARTEY,S.MOY,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 09-OCT-24 1R8K 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1R8K 1 VERSN REVDAT 2 18-JAN-05 1R8K 1 AUTHOR KEYWDS REMARK REVDAT 1 11-NOV-03 1R8K 0 JRNL AUTH J.OSIPIUK,P.QUARTEY,S.MOY,F.COLLART,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF NAD-DEPENDENT DEHYDROGENASE/CARBOXYLASE JRNL TITL 2 OF SALMONELLA TYPHIMURIUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.SIVARAMAN,Y.LI,J.BANKS,D.E.CANE,A.MATTE,M.CYGLER REMARK 1 TITL CRYSTAL STRUCTURE OF ESCHERICHIA COLI PDXA, AN ENZYME REMARK 1 TITL 2 INVOLVED IN THE PYRIDOXAL PHOSPHATE BIOSYNTHESIS PATHWAY REMARK 1 REF J.BIOL.CHEM. V. 278 43682 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 DOI 10.1074/JBC.M306344200 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2163601.840 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46337 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1872 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7256 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 340 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4850 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 419 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.25000 REMARK 3 B22 (A**2) : -4.66000 REMARK 3 B33 (A**2) : 8.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.940 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.330 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.890 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.820 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 58.05 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1R8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-03. REMARK 100 THE DEPOSITION ID IS D_1000020570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46373 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES BUFFER, COBALTOUS CHLORIDE, REMARK 280 AMMONIUM SULFATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.77050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.88525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.65575 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PUTATIVE BIOLOGICALLY ACTIVE DIMER IN ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 329 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 77 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 4 121.77 -38.08 REMARK 500 THR A 165 -126.36 -90.00 REMARK 500 THR A 225 -56.64 -125.23 REMARK 500 PHE A 278 17.21 57.43 REMARK 500 ARG A 280 33.61 -91.94 REMARK 500 ALA B 38 -164.91 -167.26 REMARK 500 ASP B 62 -73.58 -77.90 REMARK 500 PRO B 77 134.49 -39.56 REMARK 500 VAL B 78 116.04 -164.90 REMARK 500 ALA B 82 149.55 176.79 REMARK 500 GLN B 145 54.59 32.17 REMARK 500 LYS B 148 139.18 -170.68 REMARK 500 THR B 165 -121.76 -93.91 REMARK 500 THR B 225 -65.99 -133.90 REMARK 500 PHE B 250 48.96 -82.31 REMARK 500 GLU B 302 13.53 -68.69 REMARK 500 ASN B 327 37.35 -86.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 902 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 166 NE2 REMARK 620 2 HIS A 266 NE2 98.9 REMARK 620 3 HOH A 995 O 86.1 87.1 REMARK 620 4 HOH A1015 O 83.8 162.0 75.2 REMARK 620 5 HIS B 211 NE2 101.6 97.4 170.2 99.5 REMARK 620 6 HOH B1006 O 168.9 84.6 83.5 89.7 88.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 901 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 211 NE2 REMARK 620 2 HOH A1003 O 92.7 REMARK 620 3 HIS B 166 NE2 94.7 169.5 REMARK 620 4 HIS B 266 NE2 84.5 83.4 104.6 REMARK 620 5 HOH B 999 O 176.7 84.8 88.1 93.0 REMARK 620 6 HOH B1008 O 100.0 88.6 82.9 171.0 82.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 990 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 991 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 992 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC22886 RELATED DB: TARGETDB DBREF 1R8K A 1 329 UNP P58717 PDXA1_SALTY 1 329 DBREF 1R8K B 1 329 UNP P58717 PDXA1_SALTY 1 329 SEQADV 1R8K MSE A 49 UNP P58717 MET 49 MODIFIED RESIDUE SEQADV 1R8K MSE A 151 UNP P58717 MET 151 MODIFIED RESIDUE SEQADV 1R8K MSE A 152 UNP P58717 MET 152 MODIFIED RESIDUE SEQADV 1R8K MSE A 218 UNP P58717 MET 218 MODIFIED RESIDUE SEQADV 1R8K MSE A 238 UNP P58717 MET 238 MODIFIED RESIDUE SEQADV 1R8K MSE A 264 UNP P58717 MET 264 MODIFIED RESIDUE SEQADV 1R8K MSE A 324 UNP P58717 MET 324 MODIFIED RESIDUE SEQADV 1R8K MSE B 49 UNP P58717 MET 49 MODIFIED RESIDUE SEQADV 1R8K MSE B 151 UNP P58717 MET 151 MODIFIED RESIDUE SEQADV 1R8K MSE B 152 UNP P58717 MET 152 MODIFIED RESIDUE SEQADV 1R8K MSE B 218 UNP P58717 MET 218 MODIFIED RESIDUE SEQADV 1R8K MSE B 238 UNP P58717 MET 238 MODIFIED RESIDUE SEQADV 1R8K MSE B 264 UNP P58717 MET 264 MODIFIED RESIDUE SEQADV 1R8K MSE B 324 UNP P58717 MET 324 MODIFIED RESIDUE SEQRES 1 A 329 MET SER SER ALA GLN ARG VAL VAL ILE THR PRO GLY GLU SEQRES 2 A 329 PRO ALA GLY SER GLY PRO ASP LEU VAL VAL GLN LEU ALA SEQRES 3 A 329 GLN ARG ALA TRP PRO ILE GLU LEU VAL VAL CYS ALA ASP SEQRES 4 A 329 GLY ALA LEU LEU THR GLU ARG ALA ALA MSE LEU GLY LEU SEQRES 5 A 329 PRO LEU SER LEU LEU PRO TYR SER PRO ASP VAL PRO ALA SEQRES 6 A 329 ALA PRO GLN PRO ALA GLY THR LEU THR LEU LEU PRO VAL SEQRES 7 A 329 SER LEU ARG ALA PRO ALA ILE SER GLY GLN LEU THR VAL SEQRES 8 A 329 GLU ASN GLY PRO TYR VAL VAL GLU THR LEU ALA ARG ALA SEQRES 9 A 329 CYS ASP GLY CYS LEU ASN GLY GLU PHE ALA ALA LEU ILE SEQRES 10 A 329 THR GLY PRO VAL HIS LYS GLY VAL ILE ASN ASP ALA GLY SEQRES 11 A 329 ILE SER PHE THR GLY HIS THR GLU PHE PHE GLU GLU ARG SEQRES 12 A 329 SER GLN ALA LYS LYS VAL VAL MSE MSE LEU ALA THR GLU SEQRES 13 A 329 GLU LEU ARG VAL ALA LEU ALA THR THR HIS LEU PRO LEU SEQRES 14 A 329 ARG ALA ILE ALA ASP ALA ILE THR PRO ALA LEU LEU HIS SEQRES 15 A 329 GLU VAL ILE ALA ILE LEU HIS HIS ASP LEU ARG THR LYS SEQRES 16 A 329 PHE GLY ILE ALA GLU PRO ARG ILE LEU VAL CYS GLY LEU SEQRES 17 A 329 ASN PRO HIS ALA GLY GLU GLY GLY HIS MSE GLY THR GLU SEQRES 18 A 329 GLU ILE ASP THR ILE ILE PRO VAL LEU ASP GLU LEU ARG SEQRES 19 A 329 ALA GLN GLY MSE LYS LEU ASN GLY PRO LEU PRO ALA ASP SEQRES 20 A 329 THR LEU PHE GLN PRO LYS TYR LEU ASP ASN ALA ASP ALA SEQRES 21 A 329 VAL LEU ALA MSE TYR HIS ASP GLN GLY LEU PRO VAL LEU SEQRES 22 A 329 LYS TYR GLN GLY PHE GLY ARG GLY VAL ASN ILE THR LEU SEQRES 23 A 329 GLY LEU PRO PHE ILE ARG THR SER VAL ASP HIS GLY THR SEQRES 24 A 329 ALA LEU GLU LEU ALA GLY ARG GLY LYS ALA ASP VAL GLY SEQRES 25 A 329 SER PHE ILE THR ALA LEU ASN LEU ALA ILE LYS MSE ILE SEQRES 26 A 329 VAL ASN THR GLN SEQRES 1 B 329 MET SER SER ALA GLN ARG VAL VAL ILE THR PRO GLY GLU SEQRES 2 B 329 PRO ALA GLY SER GLY PRO ASP LEU VAL VAL GLN LEU ALA SEQRES 3 B 329 GLN ARG ALA TRP PRO ILE GLU LEU VAL VAL CYS ALA ASP SEQRES 4 B 329 GLY ALA LEU LEU THR GLU ARG ALA ALA MSE LEU GLY LEU SEQRES 5 B 329 PRO LEU SER LEU LEU PRO TYR SER PRO ASP VAL PRO ALA SEQRES 6 B 329 ALA PRO GLN PRO ALA GLY THR LEU THR LEU LEU PRO VAL SEQRES 7 B 329 SER LEU ARG ALA PRO ALA ILE SER GLY GLN LEU THR VAL SEQRES 8 B 329 GLU ASN GLY PRO TYR VAL VAL GLU THR LEU ALA ARG ALA SEQRES 9 B 329 CYS ASP GLY CYS LEU ASN GLY GLU PHE ALA ALA LEU ILE SEQRES 10 B 329 THR GLY PRO VAL HIS LYS GLY VAL ILE ASN ASP ALA GLY SEQRES 11 B 329 ILE SER PHE THR GLY HIS THR GLU PHE PHE GLU GLU ARG SEQRES 12 B 329 SER GLN ALA LYS LYS VAL VAL MSE MSE LEU ALA THR GLU SEQRES 13 B 329 GLU LEU ARG VAL ALA LEU ALA THR THR HIS LEU PRO LEU SEQRES 14 B 329 ARG ALA ILE ALA ASP ALA ILE THR PRO ALA LEU LEU HIS SEQRES 15 B 329 GLU VAL ILE ALA ILE LEU HIS HIS ASP LEU ARG THR LYS SEQRES 16 B 329 PHE GLY ILE ALA GLU PRO ARG ILE LEU VAL CYS GLY LEU SEQRES 17 B 329 ASN PRO HIS ALA GLY GLU GLY GLY HIS MSE GLY THR GLU SEQRES 18 B 329 GLU ILE ASP THR ILE ILE PRO VAL LEU ASP GLU LEU ARG SEQRES 19 B 329 ALA GLN GLY MSE LYS LEU ASN GLY PRO LEU PRO ALA ASP SEQRES 20 B 329 THR LEU PHE GLN PRO LYS TYR LEU ASP ASN ALA ASP ALA SEQRES 21 B 329 VAL LEU ALA MSE TYR HIS ASP GLN GLY LEU PRO VAL LEU SEQRES 22 B 329 LYS TYR GLN GLY PHE GLY ARG GLY VAL ASN ILE THR LEU SEQRES 23 B 329 GLY LEU PRO PHE ILE ARG THR SER VAL ASP HIS GLY THR SEQRES 24 B 329 ALA LEU GLU LEU ALA GLY ARG GLY LYS ALA ASP VAL GLY SEQRES 25 B 329 SER PHE ILE THR ALA LEU ASN LEU ALA ILE LYS MSE ILE SEQRES 26 B 329 VAL ASN THR GLN MODRES 1R8K MSE A 49 MET SELENOMETHIONINE MODRES 1R8K MSE A 151 MET SELENOMETHIONINE MODRES 1R8K MSE A 152 MET SELENOMETHIONINE MODRES 1R8K MSE A 218 MET SELENOMETHIONINE MODRES 1R8K MSE A 238 MET SELENOMETHIONINE MODRES 1R8K MSE A 264 MET SELENOMETHIONINE MODRES 1R8K MSE A 324 MET SELENOMETHIONINE MODRES 1R8K MSE B 49 MET SELENOMETHIONINE MODRES 1R8K MSE B 151 MET SELENOMETHIONINE MODRES 1R8K MSE B 152 MET SELENOMETHIONINE MODRES 1R8K MSE B 218 MET SELENOMETHIONINE MODRES 1R8K MSE B 238 MET SELENOMETHIONINE MODRES 1R8K MSE B 264 MET SELENOMETHIONINE MODRES 1R8K MSE B 324 MET SELENOMETHIONINE HET MSE A 49 8 HET MSE A 151 8 HET MSE A 152 8 HET MSE A 218 8 HET MSE A 238 8 HET MSE A 264 8 HET MSE A 324 8 HET MSE B 49 8 HET MSE B 151 8 HET MSE B 152 8 HET MSE B 218 8 HET MSE B 238 8 HET MSE B 264 8 HET MSE B 324 8 HET CO A 902 1 HET CL A 903 1 HET SO4 A 990 5 HET SO4 A 992 5 HET CO B 901 1 HET SO4 B 991 5 HETNAM MSE SELENOMETHIONINE HETNAM CO COBALT (II) ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 CO 2(CO 2+) FORMUL 4 CL CL 1- FORMUL 5 SO4 3(O4 S 2-) FORMUL 9 HOH *419(H2 O) HELIX 1 1 SER A 17 ALA A 26 1 10 HELIX 2 2 ASP A 39 LEU A 50 1 12 HELIX 3 3 THR A 90 GLU A 92 5 3 HELIX 4 4 ASN A 93 ASN A 110 1 18 HELIX 5 5 HIS A 122 ASP A 128 1 7 HELIX 6 6 GLY A 135 SER A 144 1 10 HELIX 7 7 PRO A 168 ARG A 170 5 3 HELIX 8 8 ALA A 171 ILE A 176 1 6 HELIX 9 9 THR A 177 LYS A 195 1 19 HELIX 10 10 ASN A 209 HIS A 217 5 9 HELIX 11 11 THR A 220 THR A 225 1 6 HELIX 12 12 THR A 225 ALA A 235 1 11 HELIX 13 13 PRO A 245 PHE A 250 1 6 HELIX 14 14 GLN A 251 ASP A 256 1 6 HELIX 15 15 TYR A 265 PHE A 278 1 14 HELIX 16 16 VAL A 311 THR A 328 1 18 HELIX 17 17 SER B 17 ALA B 26 1 10 HELIX 18 18 ASP B 39 LEU B 50 1 12 HELIX 19 19 ASN B 93 ASN B 110 1 18 HELIX 20 20 HIS B 122 ASP B 128 1 7 HELIX 21 21 GLY B 135 SER B 144 1 10 HELIX 22 22 PRO B 168 ARG B 170 5 3 HELIX 23 23 ALA B 171 ILE B 176 1 6 HELIX 24 24 THR B 177 LYS B 195 1 19 HELIX 25 25 ASN B 209 HIS B 217 5 9 HELIX 26 26 THR B 220 THR B 225 1 6 HELIX 27 27 THR B 225 ALA B 235 1 11 HELIX 28 28 PRO B 245 PHE B 250 1 6 HELIX 29 29 GLN B 251 ASP B 256 1 6 HELIX 30 30 TYR B 265 GLN B 276 1 12 HELIX 31 31 ALA B 300 ALA B 304 5 5 HELIX 32 32 VAL B 311 ASN B 327 1 17 SHEET 1 A12 SER A 55 PRO A 58 0 SHEET 2 A12 THR A 72 PRO A 77 1 O LEU A 73 N LEU A 57 SHEET 3 A12 GLU A 33 ALA A 38 1 N VAL A 36 O LEU A 76 SHEET 4 A12 ARG A 6 THR A 10 1 N ILE A 9 O VAL A 35 SHEET 5 A12 ALA A 115 THR A 118 1 O ILE A 117 N VAL A 8 SHEET 6 A12 ARG A 292 SER A 294 1 O THR A 293 N LEU A 116 SHEET 7 A12 VAL A 282 LEU A 286 -1 N ASN A 283 O SER A 294 SHEET 8 A12 VAL A 150 ALA A 154 -1 N MSE A 152 O ILE A 284 SHEET 9 A12 ARG A 159 LEU A 162 -1 O VAL A 160 N LEU A 153 SHEET 10 A12 ALA A 260 ALA A 263 1 O VAL A 261 N ALA A 161 SHEET 11 A12 ARG A 202 CYS A 206 1 N LEU A 204 O LEU A 262 SHEET 12 A12 LYS A 239 LEU A 244 1 O ASN A 241 N ILE A 203 SHEET 1 B12 SER B 55 PRO B 58 0 SHEET 2 B12 THR B 72 LEU B 75 1 O LEU B 73 N LEU B 57 SHEET 3 B12 GLU B 33 VAL B 36 1 N VAL B 36 O THR B 74 SHEET 4 B12 ARG B 6 THR B 10 1 N VAL B 7 O VAL B 35 SHEET 5 B12 ALA B 115 THR B 118 1 O ALA B 115 N VAL B 8 SHEET 6 B12 ILE B 291 SER B 294 1 O ILE B 291 N LEU B 116 SHEET 7 B12 VAL B 282 LEU B 286 -1 N ASN B 283 O SER B 294 SHEET 8 B12 VAL B 150 ALA B 154 -1 N VAL B 150 O LEU B 286 SHEET 9 B12 ARG B 159 LEU B 162 -1 O VAL B 160 N LEU B 153 SHEET 10 B12 ALA B 260 ALA B 263 1 O VAL B 261 N ALA B 161 SHEET 11 B12 ARG B 202 CYS B 206 1 N LEU B 204 O LEU B 262 SHEET 12 B12 LYS B 239 LEU B 244 1 O ASN B 241 N ILE B 203 LINK C ALA A 48 N MSE A 49 1555 1555 1.33 LINK C MSE A 49 N LEU A 50 1555 1555 1.33 LINK C VAL A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N MSE A 152 1555 1555 1.33 LINK C MSE A 152 N LEU A 153 1555 1555 1.33 LINK C HIS A 217 N MSE A 218 1555 1555 1.33 LINK C MSE A 218 N GLY A 219 1555 1555 1.33 LINK C GLY A 237 N MSE A 238 1555 1555 1.33 LINK C MSE A 238 N LYS A 239 1555 1555 1.33 LINK C ALA A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N TYR A 265 1555 1555 1.32 LINK C LYS A 323 N MSE A 324 1555 1555 1.33 LINK C MSE A 324 N ILE A 325 1555 1555 1.33 LINK C ALA B 48 N MSE B 49 1555 1555 1.33 LINK C MSE B 49 N LEU B 50 1555 1555 1.33 LINK C VAL B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N MSE B 152 1555 1555 1.33 LINK C MSE B 152 N LEU B 153 1555 1555 1.33 LINK C HIS B 217 N MSE B 218 1555 1555 1.33 LINK C MSE B 218 N GLY B 219 1555 1555 1.33 LINK C GLY B 237 N MSE B 238 1555 1555 1.33 LINK C MSE B 238 N LYS B 239 1555 1555 1.32 LINK C ALA B 263 N MSE B 264 1555 1555 1.33 LINK C MSE B 264 N TYR B 265 1555 1555 1.33 LINK C LYS B 323 N MSE B 324 1555 1555 1.33 LINK C MSE B 324 N ILE B 325 1555 1555 1.33 LINK NE2 HIS A 166 CO CO A 902 1555 1555 2.27 LINK NE2 HIS A 211 CO CO B 901 1555 1555 2.15 LINK NE2 HIS A 266 CO CO A 902 1555 1555 2.23 LINK CO CO A 902 O HOH A 995 1555 1555 2.11 LINK CO CO A 902 O HOH A1015 1555 1555 2.27 LINK CO CO A 902 NE2 HIS B 211 1555 1555 2.25 LINK CO CO A 902 O HOH B1006 1555 1555 2.25 LINK O HOH A1003 CO CO B 901 1555 1555 2.30 LINK NE2 HIS B 166 CO CO B 901 1555 1555 2.34 LINK NE2 HIS B 266 CO CO B 901 1555 1555 2.43 LINK CO CO B 901 O HOH B 999 1555 1555 2.28 LINK CO CO B 901 O HOH B1008 1555 1555 2.47 CISPEP 1 GLY A 242 PRO A 243 0 -0.37 CISPEP 2 GLY B 242 PRO B 243 0 -0.89 SITE 1 AC1 6 HIS A 211 HOH A1003 HIS B 166 HIS B 266 SITE 2 AC1 6 HOH B 999 HOH B1008 SITE 1 AC2 6 HIS A 166 HIS A 266 HOH A 995 HOH A1015 SITE 2 AC2 6 HIS B 211 HOH B1006 SITE 1 AC3 1 ARG A 143 SITE 1 AC4 8 HIS A 136 THR A 137 MSE A 151 HIS A 166 SITE 2 AC4 8 ASN A 283 ARG A 292 HOH A 994 HOH A1076 SITE 1 AC5 9 GLY B 135 HIS B 136 THR B 137 MSE B 151 SITE 2 AC5 9 HIS B 166 ASN B 283 ARG B 292 HOH B 997 SITE 3 AC5 9 HOH B1071 SITE 1 AC6 5 HIS A 189 HIS A 190 ARG A 193 HOH A1144 SITE 2 AC6 5 HOH B1064 CRYST1 119.954 119.954 55.541 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008337 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018005 0.00000