HEADER TRANSFERASE 28-OCT-03 1R9C TITLE CRYSTAL STRUCTURE OF FOSFOMYCIN RESISTANCE PROTEIN FOSX FROM TITLE 2 MESORHIZOBIUM LOTI COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.5.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MESORHIZOBIUM LOTI; SOURCE 3 ORGANISM_TAXID: 381; SOURCE 4 GENE: FOSFOMYCIN RESISTANCE PROTEIN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET20-B(+) KEYWDS FOSFOMYCIN RESISTANCE PROTEIN, MN BINDING, ANTIBIOTIC RESISTANCE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.FILLGROVE,S.PAKHOMOVA,M.E.NEWCOMER,R.N.ARMSTRONG REVDAT 4 23-AUG-23 1R9C 1 REMARK LINK REVDAT 3 13-JUL-11 1R9C 1 VERSN REVDAT 2 24-FEB-09 1R9C 1 VERSN REVDAT 1 10-FEB-04 1R9C 0 JRNL AUTH K.L.FILLGROVE,S.PAKHOMOVA,M.E.NEWCOMER,R.N.ARMSTRONG JRNL TITL MECHANISTIC DIVERSITY OF FOSFOMYCIN RESISTANCE IN PATHOGENIC JRNL TITL 2 MICROORGANISMS. JRNL REF J.AM.CHEM.SOC. V. 125 15730 2003 JRNL REFN ISSN 0002-7863 JRNL PMID 14677948 JRNL DOI 10.1021/JA039307Z REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 3 NUMBER OF REFLECTIONS : 18860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1391 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 702 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1950 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.94000 REMARK 3 B22 (A**2) : 3.23000 REMARK 3 B33 (A**2) : -1.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.175 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.676 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1999 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2682 ; 1.363 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 238 ; 6.293 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1552 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 767 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 145 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.233 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.108 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1203 ; 0.788 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1908 ; 1.426 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 796 ; 2.537 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 774 ; 3.769 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2369 14.9884 45.0010 REMARK 3 T TENSOR REMARK 3 T11: 0.0406 T22: 0.0030 REMARK 3 T33: 0.0329 T12: -0.0005 REMARK 3 T13: 0.0241 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.6192 L22: 1.5795 REMARK 3 L33: 2.8172 L12: -0.0229 REMARK 3 L13: 0.7185 L23: 0.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: -0.0182 S13: -0.1043 REMARK 3 S21: -0.0339 S22: 0.0915 S23: -0.0991 REMARK 3 S31: 0.0400 S32: 0.1373 S33: -0.0926 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 129 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3419 20.0727 53.8260 REMARK 3 T TENSOR REMARK 3 T11: 0.0500 T22: 0.0247 REMARK 3 T33: 0.0511 T12: 0.0350 REMARK 3 T13: -0.0021 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.5141 L22: 1.4795 REMARK 3 L33: 3.4345 L12: 0.0571 REMARK 3 L13: -0.3972 L23: -0.2000 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: -0.2123 S13: 0.1720 REMARK 3 S21: 0.0948 S22: -0.0277 S23: 0.0578 REMARK 3 S31: -0.1243 S32: -0.1580 S33: -0.0193 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1R9C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21017 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 55.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41400 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1LQP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, TRIS, LI2SO4, MNCL2, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 22.51700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.01200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.51700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.01200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 99 REMARK 465 VAL A 100 REMARK 465 GLU A 101 REMARK 465 GLY A 102 REMARK 465 GLU A 103 REMARK 465 LYS A 131 REMARK 465 ALA A 132 REMARK 465 LYS A 133 REMARK 465 GLY A 134 REMARK 465 LEU A 135 REMARK 465 GLU A 136 REMARK 465 ALA A 137 REMARK 465 ALA A 138 REMARK 465 GLN A 139 REMARK 465 SER B 34 REMARK 465 ASP B 35 REMARK 465 THR B 36 REMARK 465 GLU B 37 REMARK 465 GLN B 38 REMARK 465 PHE B 39 REMARK 465 SER B 40 REMARK 465 LEU B 41 REMARK 465 VAL B 100 REMARK 465 GLU B 101 REMARK 465 GLY B 102 REMARK 465 ARG B 130 REMARK 465 LYS B 131 REMARK 465 ALA B 132 REMARK 465 LYS B 133 REMARK 465 GLY B 134 REMARK 465 LEU B 135 REMARK 465 GLU B 136 REMARK 465 ALA B 137 REMARK 465 ALA B 138 REMARK 465 GLN B 139 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 38 CG CD OE1 NE2 REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 PRO A 98 CG CD REMARK 470 ARG A 130 CG CD NE CZ NH1 NH2 REMARK 470 SER B 42 OG REMARK 470 ARG B 43 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 ARG B 81 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 ARG B 97 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 99 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 51 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 76 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 39 55.34 31.10 REMARK 500 ASP A 111 -154.63 -81.89 REMARK 500 ARG B 43 -164.45 171.19 REMARK 500 PRO B 98 96.21 -52.25 REMARK 500 ASP B 111 -153.07 -82.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 7 NE2 REMARK 620 2 HOH A2002 O 90.5 REMARK 620 3 HIS B 69 NE2 105.3 88.0 REMARK 620 4 GLU B 118 OE1 91.8 171.1 83.1 REMARK 620 5 HOH B1017 O 91.9 98.4 161.7 90.1 REMARK 620 6 HOH B1035 O 162.7 80.5 89.3 99.4 75.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A2001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 GLU A 118 OE1 88.6 REMARK 620 3 HOH A2054 O 161.3 83.4 REMARK 620 4 HIS B 7 NE2 111.8 91.2 85.4 REMARK 620 5 HOH B1002 O 90.3 174.7 96.2 94.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 2001 DBREF 1R9C A 1 139 UNP Q98GG1 FOSX_RHILO 1 139 DBREF 1R9C B 1 139 UNP Q98GG1 FOSX_RHILO 1 139 SEQRES 1 A 139 MET ILE GLU GLY LEU SER HIS MET THR PHE ILE VAL ARG SEQRES 2 A 139 ASP LEU GLU ARG MET THR ARG ILE LEU GLU GLY VAL PHE SEQRES 3 A 139 ASP ALA ARG GLU VAL TYR ALA SER ASP THR GLU GLN PHE SEQRES 4 A 139 SER LEU SER ARG GLU LYS PHE PHE LEU ILE GLY ASP ILE SEQRES 5 A 139 TRP VAL ALA ILE MET GLN GLY GLU LYS LEU ALA GLU ARG SEQRES 6 A 139 SER TYR ASN HIS ILE ALA PHE LYS ILE ASP ASP ALA ASP SEQRES 7 A 139 PHE ASP ARG TYR ALA GLU ARG VAL GLY LYS LEU GLY LEU SEQRES 8 A 139 ASP MET ARG PRO PRO ARG PRO ARG VAL GLU GLY GLU GLY SEQRES 9 A 139 ARG SER ILE TYR PHE TYR ASP ASP ASP ASN HIS MET PHE SEQRES 10 A 139 GLU LEU HIS THR GLY THR LEU THR GLU ARG LEU ALA ARG SEQRES 11 A 139 LYS ALA LYS GLY LEU GLU ALA ALA GLN SEQRES 1 B 139 MET ILE GLU GLY LEU SER HIS MET THR PHE ILE VAL ARG SEQRES 2 B 139 ASP LEU GLU ARG MET THR ARG ILE LEU GLU GLY VAL PHE SEQRES 3 B 139 ASP ALA ARG GLU VAL TYR ALA SER ASP THR GLU GLN PHE SEQRES 4 B 139 SER LEU SER ARG GLU LYS PHE PHE LEU ILE GLY ASP ILE SEQRES 5 B 139 TRP VAL ALA ILE MET GLN GLY GLU LYS LEU ALA GLU ARG SEQRES 6 B 139 SER TYR ASN HIS ILE ALA PHE LYS ILE ASP ASP ALA ASP SEQRES 7 B 139 PHE ASP ARG TYR ALA GLU ARG VAL GLY LYS LEU GLY LEU SEQRES 8 B 139 ASP MET ARG PRO PRO ARG PRO ARG VAL GLU GLY GLU GLY SEQRES 9 B 139 ARG SER ILE TYR PHE TYR ASP ASP ASP ASN HIS MET PHE SEQRES 10 B 139 GLU LEU HIS THR GLY THR LEU THR GLU ARG LEU ALA ARG SEQRES 11 B 139 LYS ALA LYS GLY LEU GLU ALA ALA GLN HET MN A2001 1 HET MN B1001 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *121(H2 O) HELIX 1 1 ASP A 14 ASP A 27 1 14 HELIX 2 2 ASP A 35 GLU A 37 5 3 HELIX 3 3 ASP A 75 ALA A 77 5 3 HELIX 4 4 ASP A 78 GLY A 90 1 13 HELIX 5 5 THR A 123 ARG A 130 1 8 HELIX 6 6 ASP B 14 ASP B 27 1 14 HELIX 7 7 ASP B 78 LEU B 89 1 12 HELIX 8 8 THR B 123 LEU B 128 1 6 SHEET 1 A 7 ARG A 29 ALA A 33 0 SHEET 2 A 7 GLU A 44 ILE A 49 -1 O LEU A 48 N ARG A 29 SHEET 3 A 7 ILE A 52 GLN A 58 -1 O VAL A 54 N PHE A 47 SHEET 4 A 7 ILE A 2 VAL A 12 1 N MET A 8 O ALA A 55 SHEET 5 A 7 HIS B 69 ILE B 74 -1 O LYS B 73 N GLY A 4 SHEET 6 A 7 MET B 116 HIS B 120 1 O HIS B 120 N PHE B 72 SHEET 7 A 7 SER B 106 TYR B 110 -1 N PHE B 109 O PHE B 117 SHEET 1 B 7 SER A 106 TYR A 110 0 SHEET 2 B 7 MET A 116 HIS A 120 -1 O PHE A 117 N PHE A 109 SHEET 3 B 7 HIS A 69 LYS A 73 1 N PHE A 72 O GLU A 118 SHEET 4 B 7 GLY B 4 VAL B 12 -1 O GLY B 4 N LYS A 73 SHEET 5 B 7 ILE B 52 GLN B 58 1 O MET B 57 N VAL B 12 SHEET 6 B 7 GLU B 44 ILE B 49 -1 N PHE B 47 O VAL B 54 SHEET 7 B 7 ARG B 29 TYR B 32 -1 N ARG B 29 O LEU B 48 LINK NE2 HIS A 7 MN MN B1001 1555 1555 2.06 LINK NE2 HIS A 69 MN MN A2001 1555 1555 2.06 LINK OE1 GLU A 118 MN MN A2001 1555 1555 1.93 LINK MN MN A2001 O HOH A2054 1555 1555 2.64 LINK MN MN A2001 NE2 HIS B 7 1555 1555 2.05 LINK MN MN A2001 O HOH B1002 1555 1555 2.22 LINK O HOH A2002 MN MN B1001 1555 1555 2.32 LINK NE2 HIS B 69 MN MN B1001 1555 1555 2.06 LINK OE1 GLU B 118 MN MN B1001 1555 1555 1.92 LINK MN MN B1001 O HOH B1017 1555 1555 2.38 LINK MN MN B1001 O HOH B1035 1555 1555 2.49 SITE 1 AC1 6 HIS A 7 HOH A2002 HIS B 69 GLU B 118 SITE 2 AC1 6 HOH B1017 HOH B1035 SITE 1 AC2 6 HIS A 69 GLU A 118 HOH A2054 HOH A2058 SITE 2 AC2 6 HIS B 7 HOH B1002 CRYST1 45.034 84.024 66.861 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014956 0.00000