data_1RD3 # _entry.id 1RD3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RD3 pdb_00001rd3 10.2210/pdb1rd3/pdb RCSB RCSB020660 ? ? WWPDB D_1000020660 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RD3 _pdbx_database_status.recvd_initial_deposition_date 2003-11-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Carter, W.J.' 1 'Myles, T.' 2 'Leung, L.L.' 3 'Huntington, J.A.' 4 # _citation.id primary _citation.title 'Crystal Structure of Anticoagulant Thrombin Variant E217K Provides Insights into Thrombin Allostery' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 26387 _citation.page_last 26394 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15075325 _citation.pdbx_database_id_DOI 10.1074/jbc.M402364200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Carter, W.J.' 1 ? primary 'Myles, T.' 2 ? primary 'Gibbs, C.S.' 3 ? primary 'Leung, L.L.' 4 ? primary 'Huntington, J.A.' 5 ? # _cell.entry_id 1RD3 _cell.length_a 73.230 _cell.length_b 107.620 _cell.length_c 136.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.entry_id 1RD3 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Prothrombin 4096.534 2 3.4.21.5 ? 'Thrombin light chain' ? 2 polymer man Prothrombin 29780.285 2 3.4.21.5 E217K 'Thrombin heavy chain' ? 3 branched man ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 894.823 1 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? 5 non-polymer syn 'PHOSPHATE ION' 94.971 3 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 6 ? ? ? ? 7 water nat water 18.015 44 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR A,C ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGKGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGKGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 LYS n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Cricetinae gen. sp.' 36483 ? ? ? ? ? ? BHK-21 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human Homo F2 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Cricetinae gen. sp.' 36483 ? ? ? ? ? ? BHK-21 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RD3 A 1 H 36 ? P00734 328 ? 363 ? 1 15 2 1 1RD3 C 1 H 36 ? P00734 328 ? 363 ? 1 15 3 2 1RD3 B 1 ? 259 ? P00734 364 ? 622 ? 16 247 4 2 1RD3 D 1 ? 259 ? P00734 364 ? 622 ? 16 247 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 1RD3 LYS B 145 ? UNP P00734 GLU 592 'engineered mutation' 145 1 4 1RD3 LYS D 145 ? UNP P00734 GLU 592 'engineered mutation' 145 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RD3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.89 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.95 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details 'sodium tris, potassium phosphate, glycerol, PEG 8000, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-10-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 1RD3 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 60.54 _reflns.number_all 36976 _reflns.number_obs 36929 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.142 _reflns.pdbx_Rsym_value 0.142 _reflns.pdbx_netI_over_sigmaI 4.7 _reflns.B_iso_Wilson_estimate 45.4 _reflns.pdbx_redundancy 9.2 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.67 _reflns_shell.percent_possible_all 89.3 _reflns_shell.Rmerge_I_obs 0.633 _reflns_shell.pdbx_Rsym_value 0.687 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5856 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1RD3 _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 43.36 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 36862 _refine.ls_number_reflns_obs 36862 _refine.ls_number_reflns_R_free 1894 _refine.ls_percent_reflns_obs 97.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.259 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1DOJ' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 41.6 _refine.aniso_B[1][1] -17.31 _refine.aniso_B[1][2] .00 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][2] 24.46 _refine.aniso_B[2][3] .00 _refine.aniso_B[3][3] -7.15 _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RD3 _refine_analyze.Luzzati_coordinate_error_obs .36 _refine_analyze.Luzzati_sigma_a_obs .62 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free .41 _refine_analyze.Luzzati_sigma_a_free .62 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4635 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 149 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 4828 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 43.36 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.383 _refine_ls_shell.percent_reflns_obs 88.1 _refine_ls_shell.R_factor_R_free 0.392 _refine_ls_shell.R_factor_R_free_error .024 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 272 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1RD3 _struct.title '2.5A Structure of Anticoagulant Thrombin Variant E217K' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RD3 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 5 ? O N N 6 ? P N N 7 ? Q N N 7 ? R N N 7 ? S N N 7 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 5 D CYS A 9 ? GLY A 1 CYS A 1 5 ? 5 HELX_P HELX_P2 2 THR A 24 B SER A 31 I THR A 14 SER A 14 1 ? 8 HELX_P HELX_P3 3 ALA B 41 ? LEU B 45 ? ALA B 55 LEU B 59 1 ? 5 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO B 60 ASP B 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR B 60 ASN B 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP B 125 LEU B 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? THR B 177 ? GLU B 164 THR B 172 1 ? 9 HELX_P HELX_P8 8 CYS B 201 ? SER B 205 ? CYS B 191 SER B 195 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? GLY B 258 ? LEU B 234 GLY B 246 1 ? 13 HELX_P HELX_P10 10 GLY C 5 D CYS C 9 ? GLY C 1 CYS C 1 5 ? 5 HELX_P HELX_P11 11 PHE C 15 ? SER C 19 ? PHE C 7 SER C 11 5 ? 5 HELX_P HELX_P12 12 THR C 24 B ILE C 33 K THR C 14 ILE C 14 1 ? 10 HELX_P HELX_P13 13 ALA D 41 ? CYS D 44 ? ALA D 55 CYS D 58 5 ? 4 HELX_P HELX_P14 14 PRO D 48 B ASP D 51 E PRO D 60 ASP D 60 5 ? 4 HELX_P HELX_P15 15 ASP D 122 ? LEU D 130 ? ASP D 125 LEU D 130 1 ? 9 HELX_P HELX_P16 16 GLU D 169 ? ASP D 175 ? GLU D 164 ASP D 170 1 ? 7 HELX_P HELX_P17 17 CYS D 201 ? SER D 205 ? CYS D 191 SER D 195 5 ? 5 HELX_P HELX_P18 18 LEU D 246 ? GLY D 258 ? LEU D 234 GLY D 246 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? A CYS 1 B CYS 122 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? B CYS 42 B CYS 58 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? B CYS 168 B CYS 182 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? B CYS 191 B CYS 220 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf5 disulf ? ? C CYS 9 SG ? ? ? 1_555 D CYS 119 SG ? ? C CYS 1 D CYS 122 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf6 disulf ? ? D CYS 28 SG ? ? ? 1_555 D CYS 44 SG ? ? D CYS 42 D CYS 58 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf7 disulf ? ? D CYS 173 SG ? ? ? 1_555 D CYS 187 SG ? ? D CYS 168 D CYS 182 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf8 disulf ? ? D CYS 201 SG ? ? ? 1_555 D CYS 231 SG ? ? D CYS 191 D CYS 220 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 E NAG . C1 ? ? B ASN 60 E NAG 1 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale2 covale one ? D ASN 53 ND2 ? G ? 1_555 F NAG . C1 ? ? D ASN 60 F NAG 1 1_555 ? ? ? ? ? ? ? 1.454 ? N-Glycosylation covale3 covale both ? E NAG . O4 ? ? ? 1_555 E NDG . C1 ? ? E NAG 1 E NDG 2 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale4 covale both ? E NAG . O6 ? ? ? 1_555 E FUC . C1 ? ? E NAG 1 E FUC 5 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale5 covale both ? E NDG . O4 ? ? ? 1_555 E BMA . C1 ? ? E NDG 2 E BMA 3 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale6 covale both ? E BMA . O6 ? ? ? 1_555 E MAN . C1 ? ? E BMA 3 E MAN 4 1_555 ? ? ? ? ? ? ? 1.406 ? ? covale7 covale both ? F NAG . O4 ? ? ? 1_555 F NDG . C1 ? ? F NAG 1 F NDG 2 1_555 ? ? ? ? ? ? ? 1.395 ? ? covale8 covale both ? F NAG . O6 ? ? ? 1_555 F FUC . C1 ? ? F NAG 1 F FUC 3 1_555 ? ? ? ? ? ? ? 1.403 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 22 B . A SER 36 B PRO 23 B ? PRO 37 B 1 -0.34 2 SER 22 D . A SER 36 D PRO 23 D ? PRO 37 D 1 -0.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? D ? 7 ? E ? 7 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER B 20 ASP B 21 A 2 GLN B 161 ? VAL B 168 ? GLN B 156 VAL B 163 A 3 MET B 185 ? ALA B 188 ? MET B 180 ALA B 183 A 4 GLY B 238 ? HIS B 242 ? GLY B 226 HIS B 230 A 5 TRP B 219 ? TRP B 227 ? TRP B 207 TRP B 215 A 6 PRO B 208 ? LYS B 212 ? PRO B 198 LYS B 202 A 7 LYS B 135 ? GLY B 140 ? LYS B 135 GLY B 140 A 8 GLN B 161 ? VAL B 168 ? GLN B 156 VAL B 163 B 1 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 B 2 GLU B 25 ? LEU B 32 ? GLU B 39 LEU B 46 B 3 TRP B 37 ? THR B 40 ? TRP B 51 THR B 54 B 4 ALA B 101 ? LEU B 105 ? ALA B 104 LEU B 108 B 5 LYS B 77 ? ILE B 86 ? LYS B 81 ILE B 90 B 6 LEU B 59 ? ILE B 63 ? LEU B 64 ILE B 68 B 7 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 C 1 LEU B 46 ? TYR B 47 A LEU B 60 TYR B 60 C 2 LYS B 52 F ASN B 53 G LYS B 60 ASN B 60 D 1 SER D 5 ? ASP D 6 ? SER D 20 ASP D 21 D 2 GLN D 161 ? PRO D 166 ? GLN D 156 PRO D 161 D 3 LYS D 135 ? GLY D 140 ? LYS D 135 GLY D 140 D 4 PRO D 208 ? LYS D 212 ? PRO D 198 LYS D 202 D 5 TRP D 219 ? TRP D 227 ? TRP D 207 TRP D 215 D 6 GLY D 238 ? HIS D 242 ? GLY D 226 HIS D 230 D 7 MET D 185 ? ALA D 188 ? MET D 180 ALA D 183 E 1 GLN D 15 ? ARG D 20 ? GLN D 30 ARG D 35 E 2 GLU D 25 ? LEU D 32 ? GLU D 39 LEU D 46 E 3 TRP D 37 ? THR D 40 ? TRP D 51 THR D 54 E 4 ALA D 101 ? LEU D 105 ? ALA D 104 LEU D 108 E 5 LYS D 77 ? ILE D 86 ? LYS D 81 ILE D 90 E 6 LEU D 59 ? ILE D 63 ? LEU D 64 ILE D 68 E 7 GLN D 15 ? ARG D 20 ? GLN D 30 ARG D 35 F 1 LEU D 46 ? TYR D 47 A LEU D 60 TYR D 60 F 2 LYS D 52 F ASN D 53 G LYS D 60 ASN D 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER B 20 O VAL B 162 ? O VAL B 157 A 2 3 N VAL B 168 ? N VAL B 163 O CYS B 187 ? O CYS B 182 A 3 4 N PHE B 186 ? N PHE B 181 O TYR B 240 ? O TYR B 228 A 4 5 O THR B 241 ? O THR B 229 N ILE B 224 ? N ILE B 212 A 5 6 O TYR B 220 ? O TYR B 208 N MET B 211 ? N MET B 201 A 6 7 O VAL B 210 ? O VAL B 200 N ARG B 137 ? N ARG B 137 A 7 8 N GLY B 136 ? N GLY B 136 O LEU B 165 ? O LEU B 160 B 1 2 N LEU B 18 ? N LEU B 33 O LEU B 27 ? O LEU B 41 B 2 3 N SER B 31 ? N SER B 45 O LEU B 39 ? O LEU B 53 B 3 4 N VAL B 38 ? N VAL B 52 O MET B 103 ? O MET B 106 B 4 5 O LEU B 102 ? O LEU B 105 N TYR B 85 ? N TYR B 89 B 5 6 O SER B 79 ? O SER B 83 N VAL B 61 ? N VAL B 66 B 6 7 O LEU B 60 ? O LEU B 65 N PHE B 19 ? N PHE B 34 C 1 2 N TYR B 47 A N TYR B 60 O LYS B 52 F O LYS B 60 D 1 2 N SER D 5 ? N SER D 20 O VAL D 162 ? O VAL D 157 D 2 3 O VAL D 163 ? O VAL D 158 N VAL D 138 ? N VAL D 138 D 3 4 N ARG D 137 ? N ARG D 137 O VAL D 210 ? O VAL D 200 D 4 5 N MET D 211 ? N MET D 201 O TYR D 220 ? O TYR D 208 D 5 6 N TRP D 227 ? N TRP D 215 O PHE D 239 ? O PHE D 227 D 6 7 O TYR D 240 ? O TYR D 228 N PHE D 186 ? N PHE D 181 E 1 2 N LEU D 18 ? N LEU D 33 O LEU D 27 ? O LEU D 41 E 2 3 N SER D 31 ? N SER D 45 O LEU D 39 ? O LEU D 53 E 3 4 N THR D 40 ? N THR D 54 O ALA D 101 ? O ALA D 104 E 4 5 O LEU D 102 ? O LEU D 105 N TYR D 85 ? N TYR D 89 E 5 6 O LYS D 77 ? O LYS D 81 N ILE D 63 ? N ILE D 68 E 6 7 O LEU D 60 ? O LEU D 65 N PHE D 19 ? N PHE D 34 F 1 2 N TYR D 47 A N TYR D 60 O LYS D 52 F O LYS D 60 # _database_PDB_matrix.entry_id 1RD3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RD3 _atom_sites.fract_transf_matrix[1][1] 0.013656 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009292 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007351 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.text 'NAG E 1 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A H n A 1 2 PHE 2 1 1 PHE PHE A G n A 1 3 GLY 3 1 1 GLY GLY A F n A 1 4 SER 4 1 1 SER SER A E n A 1 5 GLY 5 1 1 GLY GLY A D n A 1 6 GLU 6 1 1 GLU GLU A C n A 1 7 ALA 7 1 1 ALA ALA A B n A 1 8 ASP 8 1 1 ASP ASP A A n A 1 9 CYS 9 1 1 CYS CYS A . n A 1 10 GLY 10 2 2 GLY GLY A . n A 1 11 LEU 11 3 3 LEU LEU A . n A 1 12 ARG 12 4 4 ARG ARG A . n A 1 13 PRO 13 5 5 PRO PRO A . n A 1 14 LEU 14 6 6 LEU LEU A . n A 1 15 PHE 15 7 7 PHE PHE A . n A 1 16 GLU 16 8 8 GLU GLU A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 LYS 18 10 10 LYS LYS A . n A 1 19 SER 19 11 11 SER SER A . n A 1 20 LEU 20 12 12 LEU LEU A . n A 1 21 GLU 21 13 13 GLU GLU A . n A 1 22 ASP 22 14 14 ASP ASP A . n A 1 23 LYS 23 14 14 LYS LYS A A n A 1 24 THR 24 14 14 THR THR A B n A 1 25 GLU 25 14 14 GLU GLU A C n A 1 26 ARG 26 14 14 ARG ARG A D n A 1 27 GLU 27 14 14 GLU GLU A E n A 1 28 LEU 28 14 14 LEU LEU A F n A 1 29 LEU 29 14 14 LEU LEU A G n A 1 30 GLU 30 14 14 GLU GLU A H n A 1 31 SER 31 14 14 SER SER A I n A 1 32 TYR 32 14 14 TYR TYR A J n A 1 33 ILE 33 14 14 ILE ILE A K n A 1 34 ASP 34 14 ? ? ? A L n A 1 35 GLY 35 14 ? ? ? A M n A 1 36 ARG 36 15 ? ? ? A . n B 2 1 ILE 1 16 16 ILE ILE B . n B 2 2 VAL 2 17 17 VAL VAL B . n B 2 3 GLU 3 18 18 GLU GLU B . n B 2 4 GLY 4 19 19 GLY GLY B . n B 2 5 SER 5 20 20 SER SER B . n B 2 6 ASP 6 21 21 ASP ASP B . n B 2 7 ALA 7 22 22 ALA ALA B . n B 2 8 GLU 8 23 23 GLU GLU B . n B 2 9 ILE 9 24 24 ILE ILE B . n B 2 10 GLY 10 25 25 GLY GLY B . n B 2 11 MET 11 26 26 MET MET B . n B 2 12 SER 12 27 27 SER SER B . n B 2 13 PRO 13 28 28 PRO PRO B . n B 2 14 TRP 14 29 29 TRP TRP B . n B 2 15 GLN 15 30 30 GLN GLN B . n B 2 16 VAL 16 31 31 VAL VAL B . n B 2 17 MET 17 32 32 MET MET B . n B 2 18 LEU 18 33 33 LEU LEU B . n B 2 19 PHE 19 34 34 PHE PHE B . n B 2 20 ARG 20 35 35 ARG ARG B . n B 2 21 LYS 21 36 36 LYS LYS B . n B 2 22 SER 22 36 36 SER SER B A n B 2 23 PRO 23 37 37 PRO PRO B . n B 2 24 GLN 24 38 38 GLN GLN B . n B 2 25 GLU 25 39 39 GLU GLU B . n B 2 26 LEU 26 40 40 LEU LEU B . n B 2 27 LEU 27 41 41 LEU LEU B . n B 2 28 CYS 28 42 42 CYS CYS B . n B 2 29 GLY 29 43 43 GLY GLY B . n B 2 30 ALA 30 44 44 ALA ALA B . n B 2 31 SER 31 45 45 SER SER B . n B 2 32 LEU 32 46 46 LEU LEU B . n B 2 33 ILE 33 47 47 ILE ILE B . n B 2 34 SER 34 48 48 SER SER B . n B 2 35 ASP 35 49 49 ASP ASP B . n B 2 36 ARG 36 50 50 ARG ARG B . n B 2 37 TRP 37 51 51 TRP TRP B . n B 2 38 VAL 38 52 52 VAL VAL B . n B 2 39 LEU 39 53 53 LEU LEU B . n B 2 40 THR 40 54 54 THR THR B . n B 2 41 ALA 41 55 55 ALA ALA B . n B 2 42 ALA 42 56 56 ALA ALA B . n B 2 43 HIS 43 57 57 HIS HIS B . n B 2 44 CYS 44 58 58 CYS CYS B . n B 2 45 LEU 45 59 59 LEU LEU B . n B 2 46 LEU 46 60 60 LEU LEU B . n B 2 47 TYR 47 60 60 TYR TYR B A n B 2 48 PRO 48 60 60 PRO PRO B B n B 2 49 PRO 49 60 60 PRO PRO B C n B 2 50 TRP 50 60 60 TRP TRP B D n B 2 51 ASP 51 60 60 ASP ASP B E n B 2 52 LYS 52 60 60 LYS LYS B F n B 2 53 ASN 53 60 60 ASN ASN B G n B 2 54 PHE 54 60 60 PHE PHE B H n B 2 55 THR 55 60 60 THR THR B I n B 2 56 GLU 56 61 61 GLU GLU B . n B 2 57 ASN 57 62 62 ASN ASN B . n B 2 58 ASP 58 63 63 ASP ASP B . n B 2 59 LEU 59 64 64 LEU LEU B . n B 2 60 LEU 60 65 65 LEU LEU B . n B 2 61 VAL 61 66 66 VAL VAL B . n B 2 62 ARG 62 67 67 ARG ARG B . n B 2 63 ILE 63 68 68 ILE ILE B . n B 2 64 GLY 64 69 69 GLY GLY B . n B 2 65 LYS 65 70 70 LYS LYS B . n B 2 66 HIS 66 71 71 HIS HIS B . n B 2 67 SER 67 72 72 SER SER B . n B 2 68 ARG 68 73 73 ARG ARG B . n B 2 69 THR 69 74 74 THR THR B . n B 2 70 ARG 70 75 75 ARG ARG B . n B 2 71 TYR 71 76 76 TYR TYR B . n B 2 72 GLU 72 77 77 GLU GLU B . n B 2 73 ARG 73 77 77 ARG ARG B A n B 2 74 ASN 74 78 78 ASN ASN B . n B 2 75 ILE 75 79 79 ILE ILE B . n B 2 76 GLU 76 80 80 GLU GLU B . n B 2 77 LYS 77 81 81 LYS LYS B . n B 2 78 ILE 78 82 82 ILE ILE B . n B 2 79 SER 79 83 83 SER SER B . n B 2 80 MET 80 84 84 MET MET B . n B 2 81 LEU 81 85 85 LEU LEU B . n B 2 82 GLU 82 86 86 GLU GLU B . n B 2 83 LYS 83 87 87 LYS LYS B . n B 2 84 ILE 84 88 88 ILE ILE B . n B 2 85 TYR 85 89 89 TYR TYR B . n B 2 86 ILE 86 90 90 ILE ILE B . n B 2 87 HIS 87 91 91 HIS HIS B . n B 2 88 PRO 88 92 92 PRO PRO B . n B 2 89 ARG 89 93 93 ARG ARG B . n B 2 90 TYR 90 94 94 TYR TYR B . n B 2 91 ASN 91 95 95 ASN ASN B . n B 2 92 TRP 92 96 96 TRP TRP B . n B 2 93 ARG 93 97 97 ARG ARG B . n B 2 94 GLU 94 97 97 GLU GLU B A n B 2 95 ASN 95 98 98 ASN ASN B . n B 2 96 LEU 96 99 99 LEU LEU B . n B 2 97 ASP 97 100 100 ASP ASP B . n B 2 98 ARG 98 101 101 ARG ARG B . n B 2 99 ASP 99 102 102 ASP ASP B . n B 2 100 ILE 100 103 103 ILE ILE B . n B 2 101 ALA 101 104 104 ALA ALA B . n B 2 102 LEU 102 105 105 LEU LEU B . n B 2 103 MET 103 106 106 MET MET B . n B 2 104 LYS 104 107 107 LYS LYS B . n B 2 105 LEU 105 108 108 LEU LEU B . n B 2 106 LYS 106 109 109 LYS LYS B . n B 2 107 LYS 107 110 110 LYS LYS B . n B 2 108 PRO 108 111 111 PRO PRO B . n B 2 109 VAL 109 112 112 VAL VAL B . n B 2 110 ALA 110 113 113 ALA ALA B . n B 2 111 PHE 111 114 114 PHE PHE B . n B 2 112 SER 112 115 115 SER SER B . n B 2 113 ASP 113 116 116 ASP ASP B . n B 2 114 TYR 114 117 117 TYR TYR B . n B 2 115 ILE 115 118 118 ILE ILE B . n B 2 116 HIS 116 119 119 HIS HIS B . n B 2 117 PRO 117 120 120 PRO PRO B . n B 2 118 VAL 118 121 121 VAL VAL B . n B 2 119 CYS 119 122 122 CYS CYS B . n B 2 120 LEU 120 123 123 LEU LEU B . n B 2 121 PRO 121 124 124 PRO PRO B . n B 2 122 ASP 122 125 125 ASP ASP B . n B 2 123 ARG 123 126 126 ARG ARG B . n B 2 124 GLU 124 127 127 GLU GLU B . n B 2 125 THR 125 128 128 THR THR B . n B 2 126 ALA 126 129 129 ALA ALA B . n B 2 127 ALA 127 129 129 ALA ALA B A n B 2 128 SER 128 129 129 SER SER B B n B 2 129 LEU 129 129 129 LEU LEU B C n B 2 130 LEU 130 130 130 LEU LEU B . n B 2 131 GLN 131 131 131 GLN GLN B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 GLY 133 133 133 GLY GLY B . n B 2 134 TYR 134 134 134 TYR TYR B . n B 2 135 LYS 135 135 135 LYS LYS B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 ARG 137 137 137 ARG ARG B . n B 2 138 VAL 138 138 138 VAL VAL B . n B 2 139 THR 139 139 139 THR THR B . n B 2 140 GLY 140 140 140 GLY GLY B . n B 2 141 TRP 141 141 141 TRP TRP B . n B 2 142 GLY 142 142 142 GLY GLY B . n B 2 143 ASN 143 143 143 ASN ASN B . n B 2 144 LEU 144 144 144 LEU LEU B . n B 2 145 LYS 145 145 145 LYS LYS B . n B 2 146 GLU 146 146 146 GLU GLU B . n B 2 147 THR 147 147 147 THR THR B . n B 2 148 TRP 148 147 147 TRP TRP B A n B 2 149 THR 149 147 147 THR THR B B n B 2 150 ALA 150 147 147 ALA ALA B C n B 2 151 ASN 151 147 147 ASN ASN B D n B 2 152 VAL 152 147 147 VAL VAL B E n B 2 153 GLY 153 148 148 GLY GLY B . n B 2 154 LYS 154 149 149 LYS LYS B . n B 2 155 GLY 155 150 150 GLY GLY B . n B 2 156 GLN 156 151 151 GLN GLN B . n B 2 157 PRO 157 152 152 PRO PRO B . n B 2 158 SER 158 153 153 SER SER B . n B 2 159 VAL 159 154 154 VAL VAL B . n B 2 160 LEU 160 155 155 LEU LEU B . n B 2 161 GLN 161 156 156 GLN GLN B . n B 2 162 VAL 162 157 157 VAL VAL B . n B 2 163 VAL 163 158 158 VAL VAL B . n B 2 164 ASN 164 159 159 ASN ASN B . n B 2 165 LEU 165 160 160 LEU LEU B . n B 2 166 PRO 166 161 161 PRO PRO B . n B 2 167 ILE 167 162 162 ILE ILE B . n B 2 168 VAL 168 163 163 VAL VAL B . n B 2 169 GLU 169 164 164 GLU GLU B . n B 2 170 ARG 170 165 165 ARG ARG B . n B 2 171 PRO 171 166 166 PRO PRO B . n B 2 172 VAL 172 167 167 VAL VAL B . n B 2 173 CYS 173 168 168 CYS CYS B . n B 2 174 LYS 174 169 169 LYS LYS B . n B 2 175 ASP 175 170 170 ASP ASP B . n B 2 176 SER 176 171 171 SER SER B . n B 2 177 THR 177 172 172 THR THR B . n B 2 178 ARG 178 173 173 ARG ARG B . n B 2 179 ILE 179 174 174 ILE ILE B . n B 2 180 ARG 180 175 175 ARG ARG B . n B 2 181 ILE 181 176 176 ILE ILE B . n B 2 182 THR 182 177 177 THR THR B . n B 2 183 ASP 183 178 178 ASP ASP B . n B 2 184 ASN 184 179 179 ASN ASN B . n B 2 185 MET 185 180 180 MET MET B . n B 2 186 PHE 186 181 181 PHE PHE B . n B 2 187 CYS 187 182 182 CYS CYS B . n B 2 188 ALA 188 183 183 ALA ALA B . n B 2 189 GLY 189 184 184 GLY GLY B . n B 2 190 TYR 190 184 184 TYR TYR B A n B 2 191 LYS 191 185 185 LYS LYS B . n B 2 192 PRO 192 186 186 PRO PRO B . n B 2 193 ASP 193 186 186 ASP ASP B A n B 2 194 GLU 194 186 186 GLU GLU B B n B 2 195 GLY 195 186 186 GLY GLY B C n B 2 196 LYS 196 186 186 LYS LYS B D n B 2 197 ARG 197 187 187 ARG ARG B . n B 2 198 GLY 198 188 188 GLY GLY B . n B 2 199 ASP 199 189 189 ASP ASP B . n B 2 200 ALA 200 190 190 ALA ALA B . n B 2 201 CYS 201 191 191 CYS CYS B . n B 2 202 GLU 202 192 192 GLU GLU B . n B 2 203 GLY 203 193 193 GLY GLY B . n B 2 204 ASP 204 194 194 ASP ASP B . n B 2 205 SER 205 195 195 SER SER B . n B 2 206 GLY 206 196 196 GLY GLY B . n B 2 207 GLY 207 197 197 GLY GLY B . n B 2 208 PRO 208 198 198 PRO PRO B . n B 2 209 PHE 209 199 199 PHE PHE B . n B 2 210 VAL 210 200 200 VAL VAL B . n B 2 211 MET 211 201 201 MET MET B . n B 2 212 LYS 212 202 202 LYS LYS B . n B 2 213 SER 213 203 203 SER SER B . n B 2 214 PRO 214 204 204 PRO PRO B . n B 2 215 PHE 215 204 204 PHE PHE B A n B 2 216 ASN 216 204 204 ASN ASN B B n B 2 217 ASN 217 205 205 ASN ASN B . n B 2 218 ARG 218 206 206 ARG ARG B . n B 2 219 TRP 219 207 207 TRP TRP B . n B 2 220 TYR 220 208 208 TYR TYR B . n B 2 221 GLN 221 209 209 GLN GLN B . n B 2 222 MET 222 210 210 MET MET B . n B 2 223 GLY 223 211 211 GLY GLY B . n B 2 224 ILE 224 212 212 ILE ILE B . n B 2 225 VAL 225 213 213 VAL VAL B . n B 2 226 SER 226 214 214 SER SER B . n B 2 227 TRP 227 215 215 TRP TRP B . n B 2 228 GLY 228 216 216 GLY GLY B . n B 2 229 LYS 229 217 217 LYS LYS B . n B 2 230 GLY 230 219 219 GLY GLY B . n B 2 231 CYS 231 220 220 CYS CYS B . n B 2 232 ASP 232 221 221 ASP ASP B . n B 2 233 ARG 233 221 221 ARG ARG B A n B 2 234 ASP 234 222 222 ASP ASP B . n B 2 235 GLY 235 223 223 GLY GLY B . n B 2 236 LYS 236 224 224 LYS LYS B . n B 2 237 TYR 237 225 225 TYR TYR B . n B 2 238 GLY 238 226 226 GLY GLY B . n B 2 239 PHE 239 227 227 PHE PHE B . n B 2 240 TYR 240 228 228 TYR TYR B . n B 2 241 THR 241 229 229 THR THR B . n B 2 242 HIS 242 230 230 HIS HIS B . n B 2 243 VAL 243 231 231 VAL VAL B . n B 2 244 PHE 244 232 232 PHE PHE B . n B 2 245 ARG 245 233 233 ARG ARG B . n B 2 246 LEU 246 234 234 LEU LEU B . n B 2 247 LYS 247 235 235 LYS LYS B . n B 2 248 LYS 248 236 236 LYS LYS B . n B 2 249 TRP 249 237 237 TRP TRP B . n B 2 250 ILE 250 238 238 ILE ILE B . n B 2 251 GLN 251 239 239 GLN GLN B . n B 2 252 LYS 252 240 240 LYS LYS B . n B 2 253 VAL 253 241 241 VAL VAL B . n B 2 254 ILE 254 242 242 ILE ILE B . n B 2 255 ASP 255 243 243 ASP ASP B . n B 2 256 GLN 256 244 244 GLN GLN B . n B 2 257 PHE 257 245 245 PHE PHE B . n B 2 258 GLY 258 246 246 GLY GLY B . n B 2 259 GLU 259 247 247 GLU GLU B . n C 1 1 THR 1 1 ? ? ? C H n C 1 2 PHE 2 1 ? ? ? C G n C 1 3 GLY 3 1 ? ? ? C F n C 1 4 SER 4 1 1 SER SER C E n C 1 5 GLY 5 1 1 GLY GLY C D n C 1 6 GLU 6 1 1 GLU GLU C C n C 1 7 ALA 7 1 1 ALA ALA C B n C 1 8 ASP 8 1 1 ASP ASP C A n C 1 9 CYS 9 1 1 CYS CYS C . n C 1 10 GLY 10 2 2 GLY GLY C . n C 1 11 LEU 11 3 3 LEU LEU C . n C 1 12 ARG 12 4 4 ARG ARG C . n C 1 13 PRO 13 5 5 PRO PRO C . n C 1 14 LEU 14 6 6 LEU LEU C . n C 1 15 PHE 15 7 7 PHE PHE C . n C 1 16 GLU 16 8 8 GLU GLU C . n C 1 17 LYS 17 9 9 LYS LYS C . n C 1 18 LYS 18 10 10 LYS LYS C . n C 1 19 SER 19 11 11 SER SER C . n C 1 20 LEU 20 12 12 LEU LEU C . n C 1 21 GLU 21 13 13 GLU GLU C . n C 1 22 ASP 22 14 14 ASP ASP C . n C 1 23 LYS 23 14 14 LYS LYS C A n C 1 24 THR 24 14 14 THR THR C B n C 1 25 GLU 25 14 14 GLU GLU C C n C 1 26 ARG 26 14 14 ARG ARG C D n C 1 27 GLU 27 14 14 GLU GLU C E n C 1 28 LEU 28 14 14 LEU LEU C F n C 1 29 LEU 29 14 14 LEU LEU C G n C 1 30 GLU 30 14 14 GLU GLU C H n C 1 31 SER 31 14 14 SER SER C I n C 1 32 TYR 32 14 14 TYR TYR C J n C 1 33 ILE 33 14 14 ILE ILE C K n C 1 34 ASP 34 14 14 ASP ASP C L n C 1 35 GLY 35 14 ? ? ? C M n C 1 36 ARG 36 15 ? ? ? C . n D 2 1 ILE 1 16 16 ILE ILE D . n D 2 2 VAL 2 17 17 VAL VAL D . n D 2 3 GLU 3 18 18 GLU GLU D . n D 2 4 GLY 4 19 19 GLY GLY D . n D 2 5 SER 5 20 20 SER SER D . n D 2 6 ASP 6 21 21 ASP ASP D . n D 2 7 ALA 7 22 22 ALA ALA D . n D 2 8 GLU 8 23 23 GLU GLU D . n D 2 9 ILE 9 24 24 ILE ILE D . n D 2 10 GLY 10 25 25 GLY GLY D . n D 2 11 MET 11 26 26 MET MET D . n D 2 12 SER 12 27 27 SER SER D . n D 2 13 PRO 13 28 28 PRO PRO D . n D 2 14 TRP 14 29 29 TRP TRP D . n D 2 15 GLN 15 30 30 GLN GLN D . n D 2 16 VAL 16 31 31 VAL VAL D . n D 2 17 MET 17 32 32 MET MET D . n D 2 18 LEU 18 33 33 LEU LEU D . n D 2 19 PHE 19 34 34 PHE PHE D . n D 2 20 ARG 20 35 35 ARG ARG D . n D 2 21 LYS 21 36 36 LYS LYS D . n D 2 22 SER 22 36 36 SER SER D A n D 2 23 PRO 23 37 37 PRO PRO D . n D 2 24 GLN 24 38 38 GLN GLN D . n D 2 25 GLU 25 39 39 GLU GLU D . n D 2 26 LEU 26 40 40 LEU LEU D . n D 2 27 LEU 27 41 41 LEU LEU D . n D 2 28 CYS 28 42 42 CYS CYS D . n D 2 29 GLY 29 43 43 GLY GLY D . n D 2 30 ALA 30 44 44 ALA ALA D . n D 2 31 SER 31 45 45 SER SER D . n D 2 32 LEU 32 46 46 LEU LEU D . n D 2 33 ILE 33 47 47 ILE ILE D . n D 2 34 SER 34 48 48 SER SER D . n D 2 35 ASP 35 49 49 ASP ASP D . n D 2 36 ARG 36 50 50 ARG ARG D . n D 2 37 TRP 37 51 51 TRP TRP D . n D 2 38 VAL 38 52 52 VAL VAL D . n D 2 39 LEU 39 53 53 LEU LEU D . n D 2 40 THR 40 54 54 THR THR D . n D 2 41 ALA 41 55 55 ALA ALA D . n D 2 42 ALA 42 56 56 ALA ALA D . n D 2 43 HIS 43 57 57 HIS HIS D . n D 2 44 CYS 44 58 58 CYS CYS D . n D 2 45 LEU 45 59 59 LEU LEU D . n D 2 46 LEU 46 60 60 LEU LEU D . n D 2 47 TYR 47 60 60 TYR TYR D A n D 2 48 PRO 48 60 60 PRO PRO D B n D 2 49 PRO 49 60 60 PRO PRO D C n D 2 50 TRP 50 60 60 TRP TRP D D n D 2 51 ASP 51 60 60 ASP ASP D E n D 2 52 LYS 52 60 60 LYS LYS D F n D 2 53 ASN 53 60 60 ASN ASN D G n D 2 54 PHE 54 60 60 PHE PHE D H n D 2 55 THR 55 60 60 THR THR D I n D 2 56 GLU 56 61 61 GLU GLU D . n D 2 57 ASN 57 62 62 ASN ASN D . n D 2 58 ASP 58 63 63 ASP ASP D . n D 2 59 LEU 59 64 64 LEU LEU D . n D 2 60 LEU 60 65 65 LEU LEU D . n D 2 61 VAL 61 66 66 VAL VAL D . n D 2 62 ARG 62 67 67 ARG ARG D . n D 2 63 ILE 63 68 68 ILE ILE D . n D 2 64 GLY 64 69 69 GLY GLY D . n D 2 65 LYS 65 70 70 LYS LYS D . n D 2 66 HIS 66 71 71 HIS HIS D . n D 2 67 SER 67 72 72 SER SER D . n D 2 68 ARG 68 73 73 ARG ARG D . n D 2 69 THR 69 74 74 THR THR D . n D 2 70 ARG 70 75 75 ARG ARG D . n D 2 71 TYR 71 76 76 TYR TYR D . n D 2 72 GLU 72 77 77 GLU GLU D . n D 2 73 ARG 73 77 77 ARG ARG D A n D 2 74 ASN 74 78 78 ASN ASN D . n D 2 75 ILE 75 79 79 ILE ILE D . n D 2 76 GLU 76 80 80 GLU GLU D . n D 2 77 LYS 77 81 81 LYS LYS D . n D 2 78 ILE 78 82 82 ILE ILE D . n D 2 79 SER 79 83 83 SER SER D . n D 2 80 MET 80 84 84 MET MET D . n D 2 81 LEU 81 85 85 LEU LEU D . n D 2 82 GLU 82 86 86 GLU GLU D . n D 2 83 LYS 83 87 87 LYS LYS D . n D 2 84 ILE 84 88 88 ILE ILE D . n D 2 85 TYR 85 89 89 TYR TYR D . n D 2 86 ILE 86 90 90 ILE ILE D . n D 2 87 HIS 87 91 91 HIS HIS D . n D 2 88 PRO 88 92 92 PRO PRO D . n D 2 89 ARG 89 93 93 ARG ARG D . n D 2 90 TYR 90 94 94 TYR TYR D . n D 2 91 ASN 91 95 95 ASN ASN D . n D 2 92 TRP 92 96 96 TRP TRP D . n D 2 93 ARG 93 97 97 ARG ARG D . n D 2 94 GLU 94 97 97 GLU GLU D A n D 2 95 ASN 95 98 98 ASN ASN D . n D 2 96 LEU 96 99 99 LEU LEU D . n D 2 97 ASP 97 100 100 ASP ASP D . n D 2 98 ARG 98 101 101 ARG ARG D . n D 2 99 ASP 99 102 102 ASP ASP D . n D 2 100 ILE 100 103 103 ILE ILE D . n D 2 101 ALA 101 104 104 ALA ALA D . n D 2 102 LEU 102 105 105 LEU LEU D . n D 2 103 MET 103 106 106 MET MET D . n D 2 104 LYS 104 107 107 LYS LYS D . n D 2 105 LEU 105 108 108 LEU LEU D . n D 2 106 LYS 106 109 109 LYS LYS D . n D 2 107 LYS 107 110 110 LYS LYS D . n D 2 108 PRO 108 111 111 PRO PRO D . n D 2 109 VAL 109 112 112 VAL VAL D . n D 2 110 ALA 110 113 113 ALA ALA D . n D 2 111 PHE 111 114 114 PHE PHE D . n D 2 112 SER 112 115 115 SER SER D . n D 2 113 ASP 113 116 116 ASP ASP D . n D 2 114 TYR 114 117 117 TYR TYR D . n D 2 115 ILE 115 118 118 ILE ILE D . n D 2 116 HIS 116 119 119 HIS HIS D . n D 2 117 PRO 117 120 120 PRO PRO D . n D 2 118 VAL 118 121 121 VAL VAL D . n D 2 119 CYS 119 122 122 CYS CYS D . n D 2 120 LEU 120 123 123 LEU LEU D . n D 2 121 PRO 121 124 124 PRO PRO D . n D 2 122 ASP 122 125 125 ASP ASP D . n D 2 123 ARG 123 126 126 ARG ARG D . n D 2 124 GLU 124 127 127 GLU GLU D . n D 2 125 THR 125 128 128 THR THR D . n D 2 126 ALA 126 129 129 ALA ALA D . n D 2 127 ALA 127 129 129 ALA ALA D A n D 2 128 SER 128 129 129 SER SER D B n D 2 129 LEU 129 129 129 LEU LEU D C n D 2 130 LEU 130 130 130 LEU LEU D . n D 2 131 GLN 131 131 131 GLN GLN D . n D 2 132 ALA 132 132 132 ALA ALA D . n D 2 133 GLY 133 133 133 GLY GLY D . n D 2 134 TYR 134 134 134 TYR TYR D . n D 2 135 LYS 135 135 135 LYS LYS D . n D 2 136 GLY 136 136 136 GLY GLY D . n D 2 137 ARG 137 137 137 ARG ARG D . n D 2 138 VAL 138 138 138 VAL VAL D . n D 2 139 THR 139 139 139 THR THR D . n D 2 140 GLY 140 140 140 GLY GLY D . n D 2 141 TRP 141 141 141 TRP TRP D . n D 2 142 GLY 142 142 142 GLY GLY D . n D 2 143 ASN 143 143 143 ASN ASN D . n D 2 144 LEU 144 144 144 LEU LEU D . n D 2 145 LYS 145 145 145 LYS LYS D . n D 2 146 GLU 146 146 146 GLU GLU D . n D 2 147 THR 147 147 147 THR THR D . n D 2 148 TRP 148 147 147 TRP TRP D A n D 2 149 THR 149 147 147 THR THR D B n D 2 150 ALA 150 147 147 ALA ALA D C n D 2 151 ASN 151 147 147 ASN ASN D D n D 2 152 VAL 152 147 147 VAL VAL D E n D 2 153 GLY 153 148 148 GLY GLY D . n D 2 154 LYS 154 149 149 LYS LYS D . n D 2 155 GLY 155 150 150 GLY GLY D . n D 2 156 GLN 156 151 151 GLN GLN D . n D 2 157 PRO 157 152 152 PRO PRO D . n D 2 158 SER 158 153 153 SER SER D . n D 2 159 VAL 159 154 154 VAL VAL D . n D 2 160 LEU 160 155 155 LEU LEU D . n D 2 161 GLN 161 156 156 GLN GLN D . n D 2 162 VAL 162 157 157 VAL VAL D . n D 2 163 VAL 163 158 158 VAL VAL D . n D 2 164 ASN 164 159 159 ASN ASN D . n D 2 165 LEU 165 160 160 LEU LEU D . n D 2 166 PRO 166 161 161 PRO PRO D . n D 2 167 ILE 167 162 162 ILE ILE D . n D 2 168 VAL 168 163 163 VAL VAL D . n D 2 169 GLU 169 164 164 GLU GLU D . n D 2 170 ARG 170 165 165 ARG ARG D . n D 2 171 PRO 171 166 166 PRO PRO D . n D 2 172 VAL 172 167 167 VAL VAL D . n D 2 173 CYS 173 168 168 CYS CYS D . n D 2 174 LYS 174 169 169 LYS LYS D . n D 2 175 ASP 175 170 170 ASP ASP D . n D 2 176 SER 176 171 171 SER SER D . n D 2 177 THR 177 172 172 THR THR D . n D 2 178 ARG 178 173 173 ARG ARG D . n D 2 179 ILE 179 174 174 ILE ILE D . n D 2 180 ARG 180 175 175 ARG ARG D . n D 2 181 ILE 181 176 176 ILE ILE D . n D 2 182 THR 182 177 177 THR THR D . n D 2 183 ASP 183 178 178 ASP ASP D . n D 2 184 ASN 184 179 179 ASN ASN D . n D 2 185 MET 185 180 180 MET MET D . n D 2 186 PHE 186 181 181 PHE PHE D . n D 2 187 CYS 187 182 182 CYS CYS D . n D 2 188 ALA 188 183 183 ALA ALA D . n D 2 189 GLY 189 184 184 GLY GLY D . n D 2 190 TYR 190 184 184 TYR TYR D A n D 2 191 LYS 191 185 185 LYS LYS D . n D 2 192 PRO 192 186 186 PRO PRO D . n D 2 193 ASP 193 186 186 ASP ASP D A n D 2 194 GLU 194 186 186 GLU GLU D B n D 2 195 GLY 195 186 186 GLY GLY D C n D 2 196 LYS 196 186 186 LYS LYS D D n D 2 197 ARG 197 187 187 ARG ARG D . n D 2 198 GLY 198 188 188 GLY GLY D . n D 2 199 ASP 199 189 189 ASP ASP D . n D 2 200 ALA 200 190 190 ALA ALA D . n D 2 201 CYS 201 191 191 CYS CYS D . n D 2 202 GLU 202 192 192 GLU GLU D . n D 2 203 GLY 203 193 193 GLY GLY D . n D 2 204 ASP 204 194 194 ASP ASP D . n D 2 205 SER 205 195 195 SER SER D . n D 2 206 GLY 206 196 196 GLY GLY D . n D 2 207 GLY 207 197 197 GLY GLY D . n D 2 208 PRO 208 198 198 PRO PRO D . n D 2 209 PHE 209 199 199 PHE PHE D . n D 2 210 VAL 210 200 200 VAL VAL D . n D 2 211 MET 211 201 201 MET MET D . n D 2 212 LYS 212 202 202 LYS LYS D . n D 2 213 SER 213 203 203 SER SER D . n D 2 214 PRO 214 204 204 PRO PRO D . n D 2 215 PHE 215 204 204 PHE PHE D A n D 2 216 ASN 216 204 204 ASN ASN D B n D 2 217 ASN 217 205 205 ASN ASN D . n D 2 218 ARG 218 206 206 ARG ARG D . n D 2 219 TRP 219 207 207 TRP TRP D . n D 2 220 TYR 220 208 208 TYR TYR D . n D 2 221 GLN 221 209 209 GLN GLN D . n D 2 222 MET 222 210 210 MET MET D . n D 2 223 GLY 223 211 211 GLY GLY D . n D 2 224 ILE 224 212 212 ILE ILE D . n D 2 225 VAL 225 213 213 VAL VAL D . n D 2 226 SER 226 214 214 SER SER D . n D 2 227 TRP 227 215 215 TRP TRP D . n D 2 228 GLY 228 216 216 GLY GLY D . n D 2 229 LYS 229 217 217 LYS LYS D . n D 2 230 GLY 230 219 219 GLY GLY D . n D 2 231 CYS 231 220 220 CYS CYS D . n D 2 232 ASP 232 221 221 ASP ASP D . n D 2 233 ARG 233 221 221 ARG ARG D A n D 2 234 ASP 234 222 222 ASP ASP D . n D 2 235 GLY 235 223 223 GLY GLY D . n D 2 236 LYS 236 224 224 LYS LYS D . n D 2 237 TYR 237 225 225 TYR TYR D . n D 2 238 GLY 238 226 226 GLY GLY D . n D 2 239 PHE 239 227 227 PHE PHE D . n D 2 240 TYR 240 228 228 TYR TYR D . n D 2 241 THR 241 229 229 THR THR D . n D 2 242 HIS 242 230 230 HIS HIS D . n D 2 243 VAL 243 231 231 VAL VAL D . n D 2 244 PHE 244 232 232 PHE PHE D . n D 2 245 ARG 245 233 233 ARG ARG D . n D 2 246 LEU 246 234 234 LEU LEU D . n D 2 247 LYS 247 235 235 LYS LYS D . n D 2 248 LYS 248 236 236 LYS LYS D . n D 2 249 TRP 249 237 237 TRP TRP D . n D 2 250 ILE 250 238 238 ILE ILE D . n D 2 251 GLN 251 239 239 GLN GLN D . n D 2 252 LYS 252 240 240 LYS LYS D . n D 2 253 VAL 253 241 241 VAL VAL D . n D 2 254 ILE 254 242 242 ILE ILE D . n D 2 255 ASP 255 243 243 ASP ASP D . n D 2 256 GLN 256 244 244 GLN GLN D . n D 2 257 PHE 257 245 245 PHE PHE D . n D 2 258 GLY 258 246 246 GLY GLY D . n D 2 259 GLU 259 247 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 PO4 1 248 1 PO4 PO4 B . H 5 PO4 1 249 3 PO4 PO4 B . I 6 GOL 1 250 1 GOL GOL B . J 6 GOL 1 251 2 GOL GOL B . K 6 GOL 1 252 3 GOL GOL B . L 6 GOL 1 253 4 GOL GOL B . M 6 GOL 1 254 6 GOL GOL B . N 5 PO4 1 248 2 PO4 PO4 D . O 6 GOL 1 249 5 GOL GOL D . P 7 HOH 1 18 2 HOH HOH A . P 7 HOH 2 19 3 HOH HOH A . Q 7 HOH 1 255 1 HOH HOH B . Q 7 HOH 2 256 4 HOH HOH B . Q 7 HOH 3 257 5 HOH HOH B . Q 7 HOH 4 258 6 HOH HOH B . Q 7 HOH 5 259 7 HOH HOH B . Q 7 HOH 6 260 8 HOH HOH B . Q 7 HOH 7 261 12 HOH HOH B . Q 7 HOH 8 262 14 HOH HOH B . Q 7 HOH 9 263 15 HOH HOH B . Q 7 HOH 10 264 16 HOH HOH B . Q 7 HOH 11 265 18 HOH HOH B . Q 7 HOH 12 266 19 HOH HOH B . Q 7 HOH 13 267 20 HOH HOH B . Q 7 HOH 14 268 21 HOH HOH B . Q 7 HOH 15 269 30 HOH HOH B . Q 7 HOH 16 270 31 HOH HOH B . Q 7 HOH 17 271 32 HOH HOH B . Q 7 HOH 18 272 33 HOH HOH B . Q 7 HOH 19 273 34 HOH HOH B . Q 7 HOH 20 274 35 HOH HOH B . Q 7 HOH 21 275 36 HOH HOH B . Q 7 HOH 22 276 37 HOH HOH B . Q 7 HOH 23 277 38 HOH HOH B . R 7 HOH 1 17 10 HOH HOH C . R 7 HOH 2 18 22 HOH HOH C . S 7 HOH 1 250 9 HOH HOH D . S 7 HOH 2 251 11 HOH HOH D . S 7 HOH 3 252 13 HOH HOH D . S 7 HOH 4 253 17 HOH HOH D . S 7 HOH 5 254 23 HOH HOH D . S 7 HOH 6 255 24 HOH HOH D . S 7 HOH 7 256 25 HOH HOH D . S 7 HOH 8 257 26 HOH HOH D . S 7 HOH 9 258 27 HOH HOH D . S 7 HOH 10 259 28 HOH HOH D . S 7 HOH 11 260 29 HOH HOH D . S 7 HOH 12 261 39 HOH HOH D . S 7 HOH 13 262 40 HOH HOH D . S 7 HOH 14 263 41 HOH HOH D . S 7 HOH 15 264 42 HOH HOH D . S 7 HOH 16 265 43 HOH HOH D . S 7 HOH 17 266 44 HOH HOH D . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 53 B ASN 60 G ASN 'GLYCOSYLATION SITE' 2 D ASN 53 D ASN 60 G ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 software_defined_assembly PISA,PQS dimeric 2 3 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 2 1 A,B,E,G,H,I,J,K,L,M,P,Q 3 1 C,D,F,N,O,R,S # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 4870 ? 2 MORE -3 ? 2 'SSA (A^2)' 13650 ? 3 'ABSA (A^2)' 3470 ? 3 MORE -8 ? 3 'SSA (A^2)' 13410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-04 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-10-27 6 'Structure model' 2 2 2023-08-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_validate_chiral 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' database_2 21 5 'Structure model' struct_ref_seq_dif 22 6 'Structure model' chem_comp_atom 23 6 'Structure model' chem_comp_bond 24 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.name' 15 4 'Structure model' '_chem_comp.type' 16 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.pdbx_role' 19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 5 'Structure model' '_chem_comp.pdbx_synonyms' 30 5 'Structure model' '_database_2.pdbx_DOI' 31 5 'Structure model' '_database_2.pdbx_database_accession' 32 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 MOLREP phasing . ? 3 CNS refinement 1.0 ? 4 CCP4 'data scaling' '(SCALA)' ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A GLY 1 F ? CA A GLY 1 F ? C A GLY 1 F ? 97.31 113.10 -15.79 2.50 N 2 1 N B GLY 186 C ? CA B GLY 186 C ? C B GLY 186 C ? 96.35 113.10 -16.75 2.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 1 E ? -0.85 -126.40 2 1 PHE A 7 ? ? -139.47 -90.92 3 1 TYR B 60 A ? -158.25 83.99 4 1 ASN B 60 G ? -157.45 84.17 5 1 THR B 74 ? ? -79.86 -72.88 6 1 ARG B 77 A ? -36.03 125.59 7 1 ASN B 78 ? ? 51.94 14.34 8 1 ASN B 98 ? ? -142.74 13.99 9 1 SER B 115 ? ? -169.13 -166.31 10 1 GLU B 146 ? ? -28.83 126.31 11 1 ASN B 147 D ? 71.93 140.35 12 1 ASP B 186 A ? -76.74 40.71 13 1 PHE C 7 ? ? -132.85 -82.54 14 1 GLN D 38 ? ? -60.48 92.11 15 1 SER D 48 ? ? 172.50 177.44 16 1 TYR D 60 A ? -156.99 84.28 17 1 GLU D 61 ? ? -36.48 -31.40 18 1 THR D 74 ? ? -86.03 -86.33 19 1 ARG D 75 ? ? -39.28 132.32 20 1 ILE D 79 ? ? -132.92 -53.20 21 1 GLU D 97 A ? -112.05 -71.07 22 1 SER D 115 ? ? -170.46 -166.63 23 1 GLU D 146 ? ? -27.65 132.14 24 1 THR D 147 B ? -86.58 -154.51 25 1 ASN D 147 D ? 79.69 136.53 26 1 ASP D 186 A ? -59.93 -85.83 27 1 GLU D 186 B ? -23.87 130.55 28 1 GLN D 244 ? ? -174.70 -30.34 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id E _pdbx_validate_chiral.auth_comp_id NAG _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 1 E OG ? A SER 4 OG 2 1 Y 1 B ARG 75 ? CD ? B ARG 70 CD 3 1 Y 1 B ARG 75 ? NE ? B ARG 70 NE 4 1 Y 1 B ARG 75 ? CZ ? B ARG 70 CZ 5 1 Y 1 B ARG 75 ? NH1 ? B ARG 70 NH1 6 1 Y 1 B ARG 75 ? NH2 ? B ARG 70 NH2 7 1 Y 1 B LYS 149 ? CG ? B LYS 154 CG 8 1 Y 1 B LYS 149 ? CD ? B LYS 154 CD 9 1 Y 1 B LYS 149 ? CE ? B LYS 154 CE 10 1 Y 1 B LYS 149 ? NZ ? B LYS 154 NZ 11 1 Y 1 B ARG 175 ? CZ ? B ARG 180 CZ 12 1 Y 1 B ARG 175 ? NH1 ? B ARG 180 NH1 13 1 Y 1 B ARG 175 ? NH2 ? B ARG 180 NH2 14 1 Y 1 B GLU 186 B CG ? B GLU 194 CG 15 1 Y 1 B GLU 186 B CD ? B GLU 194 CD 16 1 Y 1 B GLU 186 B OE1 ? B GLU 194 OE1 17 1 Y 1 B GLU 186 B OE2 ? B GLU 194 OE2 18 1 Y 1 B ARG 187 ? CD ? B ARG 197 CD 19 1 Y 1 B ARG 187 ? NE ? B ARG 197 NE 20 1 Y 1 B ARG 187 ? CZ ? B ARG 197 CZ 21 1 Y 1 B ARG 187 ? NH1 ? B ARG 197 NH1 22 1 Y 1 B ARG 187 ? NH2 ? B ARG 197 NH2 23 1 Y 1 B LYS 236 ? CD ? B LYS 248 CD 24 1 Y 1 B LYS 236 ? CE ? B LYS 248 CE 25 1 Y 1 B LYS 236 ? NZ ? B LYS 248 NZ 26 1 Y 1 B LYS 240 ? CE ? B LYS 252 CE 27 1 Y 1 B LYS 240 ? NZ ? B LYS 252 NZ 28 1 Y 1 C ARG 14 D NE ? C ARG 26 NE 29 1 Y 1 C ARG 14 D CZ ? C ARG 26 CZ 30 1 Y 1 C ARG 14 D NH1 ? C ARG 26 NH1 31 1 Y 1 C ARG 14 D NH2 ? C ARG 26 NH2 32 1 Y 1 D ARG 50 ? CG ? D ARG 36 CG 33 1 Y 1 D ARG 50 ? CD ? D ARG 36 CD 34 1 Y 1 D ARG 50 ? NE ? D ARG 36 NE 35 1 Y 1 D ARG 50 ? CZ ? D ARG 36 CZ 36 1 Y 1 D ARG 50 ? NH1 ? D ARG 36 NH1 37 1 Y 1 D ARG 50 ? NH2 ? D ARG 36 NH2 38 1 Y 1 D LYS 110 ? CG ? D LYS 107 CG 39 1 Y 1 D LYS 110 ? CD ? D LYS 107 CD 40 1 Y 1 D LYS 110 ? CE ? D LYS 107 CE 41 1 Y 1 D LYS 110 ? NZ ? D LYS 107 NZ 42 1 Y 1 D LYS 149 ? CG ? D LYS 154 CG 43 1 Y 1 D LYS 149 ? CD ? D LYS 154 CD 44 1 Y 1 D LYS 149 ? CE ? D LYS 154 CE 45 1 Y 1 D LYS 149 ? NZ ? D LYS 154 NZ 46 1 Y 1 D ARG 187 ? CD ? D ARG 197 CD 47 1 Y 1 D ARG 187 ? NE ? D ARG 197 NE 48 1 Y 1 D ARG 187 ? CZ ? D ARG 197 CZ 49 1 Y 1 D ARG 187 ? NH1 ? D ARG 197 NH1 50 1 Y 1 D ARG 187 ? NH2 ? D ARG 197 NH2 51 1 Y 1 D LYS 236 ? CD ? D LYS 248 CD 52 1 Y 1 D LYS 236 ? CE ? D LYS 248 CE 53 1 Y 1 D LYS 236 ? NZ ? D LYS 248 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 14 L A ASP 34 2 1 Y 1 A GLY 14 M A GLY 35 3 1 Y 1 A ARG 15 ? A ARG 36 4 1 Y 1 C THR 1 H C THR 1 5 1 Y 1 C PHE 1 G C PHE 2 6 1 Y 1 C GLY 1 F C GLY 3 7 1 Y 1 C GLY 14 M C GLY 35 8 1 Y 1 C ARG 15 ? C ARG 36 9 1 Y 1 D GLU 247 ? D GLU 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 GOL C1 C N N 184 GOL O1 O N N 185 GOL C2 C N N 186 GOL O2 O N N 187 GOL C3 C N N 188 GOL O3 O N N 189 GOL H11 H N N 190 GOL H12 H N N 191 GOL HO1 H N N 192 GOL H2 H N N 193 GOL HO2 H N N 194 GOL H31 H N N 195 GOL H32 H N N 196 GOL HO3 H N N 197 HIS N N N N 198 HIS CA C N S 199 HIS C C N N 200 HIS O O N N 201 HIS CB C N N 202 HIS CG C Y N 203 HIS ND1 N Y N 204 HIS CD2 C Y N 205 HIS CE1 C Y N 206 HIS NE2 N Y N 207 HIS OXT O N N 208 HIS H H N N 209 HIS H2 H N N 210 HIS HA H N N 211 HIS HB2 H N N 212 HIS HB3 H N N 213 HIS HD1 H N N 214 HIS HD2 H N N 215 HIS HE1 H N N 216 HIS HE2 H N N 217 HIS HXT H N N 218 HOH O O N N 219 HOH H1 H N N 220 HOH H2 H N N 221 ILE N N N N 222 ILE CA C N S 223 ILE C C N N 224 ILE O O N N 225 ILE CB C N S 226 ILE CG1 C N N 227 ILE CG2 C N N 228 ILE CD1 C N N 229 ILE OXT O N N 230 ILE H H N N 231 ILE H2 H N N 232 ILE HA H N N 233 ILE HB H N N 234 ILE HG12 H N N 235 ILE HG13 H N N 236 ILE HG21 H N N 237 ILE HG22 H N N 238 ILE HG23 H N N 239 ILE HD11 H N N 240 ILE HD12 H N N 241 ILE HD13 H N N 242 ILE HXT H N N 243 LEU N N N N 244 LEU CA C N S 245 LEU C C N N 246 LEU O O N N 247 LEU CB C N N 248 LEU CG C N N 249 LEU CD1 C N N 250 LEU CD2 C N N 251 LEU OXT O N N 252 LEU H H N N 253 LEU H2 H N N 254 LEU HA H N N 255 LEU HB2 H N N 256 LEU HB3 H N N 257 LEU HG H N N 258 LEU HD11 H N N 259 LEU HD12 H N N 260 LEU HD13 H N N 261 LEU HD21 H N N 262 LEU HD22 H N N 263 LEU HD23 H N N 264 LEU HXT H N N 265 LYS N N N N 266 LYS CA C N S 267 LYS C C N N 268 LYS O O N N 269 LYS CB C N N 270 LYS CG C N N 271 LYS CD C N N 272 LYS CE C N N 273 LYS NZ N N N 274 LYS OXT O N N 275 LYS H H N N 276 LYS H2 H N N 277 LYS HA H N N 278 LYS HB2 H N N 279 LYS HB3 H N N 280 LYS HG2 H N N 281 LYS HG3 H N N 282 LYS HD2 H N N 283 LYS HD3 H N N 284 LYS HE2 H N N 285 LYS HE3 H N N 286 LYS HZ1 H N N 287 LYS HZ2 H N N 288 LYS HZ3 H N N 289 LYS HXT H N N 290 MAN C1 C N S 291 MAN C2 C N S 292 MAN C3 C N S 293 MAN C4 C N S 294 MAN C5 C N R 295 MAN C6 C N N 296 MAN O1 O N N 297 MAN O2 O N N 298 MAN O3 O N N 299 MAN O4 O N N 300 MAN O5 O N N 301 MAN O6 O N N 302 MAN H1 H N N 303 MAN H2 H N N 304 MAN H3 H N N 305 MAN H4 H N N 306 MAN H5 H N N 307 MAN H61 H N N 308 MAN H62 H N N 309 MAN HO1 H N N 310 MAN HO2 H N N 311 MAN HO3 H N N 312 MAN HO4 H N N 313 MAN HO6 H N N 314 MET N N N N 315 MET CA C N S 316 MET C C N N 317 MET O O N N 318 MET CB C N N 319 MET CG C N N 320 MET SD S N N 321 MET CE C N N 322 MET OXT O N N 323 MET H H N N 324 MET H2 H N N 325 MET HA H N N 326 MET HB2 H N N 327 MET HB3 H N N 328 MET HG2 H N N 329 MET HG3 H N N 330 MET HE1 H N N 331 MET HE2 H N N 332 MET HE3 H N N 333 MET HXT H N N 334 NAG C1 C N R 335 NAG C2 C N R 336 NAG C3 C N R 337 NAG C4 C N S 338 NAG C5 C N R 339 NAG C6 C N N 340 NAG C7 C N N 341 NAG C8 C N N 342 NAG N2 N N N 343 NAG O1 O N N 344 NAG O3 O N N 345 NAG O4 O N N 346 NAG O5 O N N 347 NAG O6 O N N 348 NAG O7 O N N 349 NAG H1 H N N 350 NAG H2 H N N 351 NAG H3 H N N 352 NAG H4 H N N 353 NAG H5 H N N 354 NAG H61 H N N 355 NAG H62 H N N 356 NAG H81 H N N 357 NAG H82 H N N 358 NAG H83 H N N 359 NAG HN2 H N N 360 NAG HO1 H N N 361 NAG HO3 H N N 362 NAG HO4 H N N 363 NAG HO6 H N N 364 NDG C1 C N S 365 NDG C2 C N R 366 NDG C3 C N R 367 NDG C4 C N S 368 NDG C5 C N R 369 NDG C6 C N N 370 NDG C7 C N N 371 NDG C8 C N N 372 NDG O5 O N N 373 NDG O3 O N N 374 NDG O4 O N N 375 NDG O6 O N N 376 NDG O7 O N N 377 NDG N2 N N N 378 NDG O1 O N N 379 NDG H1 H N N 380 NDG H2 H N N 381 NDG H3 H N N 382 NDG H4 H N N 383 NDG H5 H N N 384 NDG H61 H N N 385 NDG H62 H N N 386 NDG H81 H N N 387 NDG H82 H N N 388 NDG H83 H N N 389 NDG HO3 H N N 390 NDG HO4 H N N 391 NDG HO6 H N N 392 NDG HN2 H N N 393 NDG HO1 H N N 394 PHE N N N N 395 PHE CA C N S 396 PHE C C N N 397 PHE O O N N 398 PHE CB C N N 399 PHE CG C Y N 400 PHE CD1 C Y N 401 PHE CD2 C Y N 402 PHE CE1 C Y N 403 PHE CE2 C Y N 404 PHE CZ C Y N 405 PHE OXT O N N 406 PHE H H N N 407 PHE H2 H N N 408 PHE HA H N N 409 PHE HB2 H N N 410 PHE HB3 H N N 411 PHE HD1 H N N 412 PHE HD2 H N N 413 PHE HE1 H N N 414 PHE HE2 H N N 415 PHE HZ H N N 416 PHE HXT H N N 417 PO4 P P N N 418 PO4 O1 O N N 419 PO4 O2 O N N 420 PO4 O3 O N N 421 PO4 O4 O N N 422 PRO N N N N 423 PRO CA C N S 424 PRO C C N N 425 PRO O O N N 426 PRO CB C N N 427 PRO CG C N N 428 PRO CD C N N 429 PRO OXT O N N 430 PRO H H N N 431 PRO HA H N N 432 PRO HB2 H N N 433 PRO HB3 H N N 434 PRO HG2 H N N 435 PRO HG3 H N N 436 PRO HD2 H N N 437 PRO HD3 H N N 438 PRO HXT H N N 439 SER N N N N 440 SER CA C N S 441 SER C C N N 442 SER O O N N 443 SER CB C N N 444 SER OG O N N 445 SER OXT O N N 446 SER H H N N 447 SER H2 H N N 448 SER HA H N N 449 SER HB2 H N N 450 SER HB3 H N N 451 SER HG H N N 452 SER HXT H N N 453 THR N N N N 454 THR CA C N S 455 THR C C N N 456 THR O O N N 457 THR CB C N R 458 THR OG1 O N N 459 THR CG2 C N N 460 THR OXT O N N 461 THR H H N N 462 THR H2 H N N 463 THR HA H N N 464 THR HB H N N 465 THR HG1 H N N 466 THR HG21 H N N 467 THR HG22 H N N 468 THR HG23 H N N 469 THR HXT H N N 470 TRP N N N N 471 TRP CA C N S 472 TRP C C N N 473 TRP O O N N 474 TRP CB C N N 475 TRP CG C Y N 476 TRP CD1 C Y N 477 TRP CD2 C Y N 478 TRP NE1 N Y N 479 TRP CE2 C Y N 480 TRP CE3 C Y N 481 TRP CZ2 C Y N 482 TRP CZ3 C Y N 483 TRP CH2 C Y N 484 TRP OXT O N N 485 TRP H H N N 486 TRP H2 H N N 487 TRP HA H N N 488 TRP HB2 H N N 489 TRP HB3 H N N 490 TRP HD1 H N N 491 TRP HE1 H N N 492 TRP HE3 H N N 493 TRP HZ2 H N N 494 TRP HZ3 H N N 495 TRP HH2 H N N 496 TRP HXT H N N 497 TYR N N N N 498 TYR CA C N S 499 TYR C C N N 500 TYR O O N N 501 TYR CB C N N 502 TYR CG C Y N 503 TYR CD1 C Y N 504 TYR CD2 C Y N 505 TYR CE1 C Y N 506 TYR CE2 C Y N 507 TYR CZ C Y N 508 TYR OH O N N 509 TYR OXT O N N 510 TYR H H N N 511 TYR H2 H N N 512 TYR HA H N N 513 TYR HB2 H N N 514 TYR HB3 H N N 515 TYR HD1 H N N 516 TYR HD2 H N N 517 TYR HE1 H N N 518 TYR HE2 H N N 519 TYR HH H N N 520 TYR HXT H N N 521 VAL N N N N 522 VAL CA C N S 523 VAL C C N N 524 VAL O O N N 525 VAL CB C N N 526 VAL CG1 C N N 527 VAL CG2 C N N 528 VAL OXT O N N 529 VAL H H N N 530 VAL H2 H N N 531 VAL HA H N N 532 VAL HB H N N 533 VAL HG11 H N N 534 VAL HG12 H N N 535 VAL HG13 H N N 536 VAL HG21 H N N 537 VAL HG22 H N N 538 VAL HG23 H N N 539 VAL HXT H N N 540 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 GOL C1 O1 sing N N 176 GOL C1 C2 sing N N 177 GOL C1 H11 sing N N 178 GOL C1 H12 sing N N 179 GOL O1 HO1 sing N N 180 GOL C2 O2 sing N N 181 GOL C2 C3 sing N N 182 GOL C2 H2 sing N N 183 GOL O2 HO2 sing N N 184 GOL C3 O3 sing N N 185 GOL C3 H31 sing N N 186 GOL C3 H32 sing N N 187 GOL O3 HO3 sing N N 188 HIS N CA sing N N 189 HIS N H sing N N 190 HIS N H2 sing N N 191 HIS CA C sing N N 192 HIS CA CB sing N N 193 HIS CA HA sing N N 194 HIS C O doub N N 195 HIS C OXT sing N N 196 HIS CB CG sing N N 197 HIS CB HB2 sing N N 198 HIS CB HB3 sing N N 199 HIS CG ND1 sing Y N 200 HIS CG CD2 doub Y N 201 HIS ND1 CE1 doub Y N 202 HIS ND1 HD1 sing N N 203 HIS CD2 NE2 sing Y N 204 HIS CD2 HD2 sing N N 205 HIS CE1 NE2 sing Y N 206 HIS CE1 HE1 sing N N 207 HIS NE2 HE2 sing N N 208 HIS OXT HXT sing N N 209 HOH O H1 sing N N 210 HOH O H2 sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MAN C1 C2 sing N N 278 MAN C1 O1 sing N N 279 MAN C1 O5 sing N N 280 MAN C1 H1 sing N N 281 MAN C2 C3 sing N N 282 MAN C2 O2 sing N N 283 MAN C2 H2 sing N N 284 MAN C3 C4 sing N N 285 MAN C3 O3 sing N N 286 MAN C3 H3 sing N N 287 MAN C4 C5 sing N N 288 MAN C4 O4 sing N N 289 MAN C4 H4 sing N N 290 MAN C5 C6 sing N N 291 MAN C5 O5 sing N N 292 MAN C5 H5 sing N N 293 MAN C6 O6 sing N N 294 MAN C6 H61 sing N N 295 MAN C6 H62 sing N N 296 MAN O1 HO1 sing N N 297 MAN O2 HO2 sing N N 298 MAN O3 HO3 sing N N 299 MAN O4 HO4 sing N N 300 MAN O6 HO6 sing N N 301 MET N CA sing N N 302 MET N H sing N N 303 MET N H2 sing N N 304 MET CA C sing N N 305 MET CA CB sing N N 306 MET CA HA sing N N 307 MET C O doub N N 308 MET C OXT sing N N 309 MET CB CG sing N N 310 MET CB HB2 sing N N 311 MET CB HB3 sing N N 312 MET CG SD sing N N 313 MET CG HG2 sing N N 314 MET CG HG3 sing N N 315 MET SD CE sing N N 316 MET CE HE1 sing N N 317 MET CE HE2 sing N N 318 MET CE HE3 sing N N 319 MET OXT HXT sing N N 320 NAG C1 C2 sing N N 321 NAG C1 O1 sing N N 322 NAG C1 O5 sing N N 323 NAG C1 H1 sing N N 324 NAG C2 C3 sing N N 325 NAG C2 N2 sing N N 326 NAG C2 H2 sing N N 327 NAG C3 C4 sing N N 328 NAG C3 O3 sing N N 329 NAG C3 H3 sing N N 330 NAG C4 C5 sing N N 331 NAG C4 O4 sing N N 332 NAG C4 H4 sing N N 333 NAG C5 C6 sing N N 334 NAG C5 O5 sing N N 335 NAG C5 H5 sing N N 336 NAG C6 O6 sing N N 337 NAG C6 H61 sing N N 338 NAG C6 H62 sing N N 339 NAG C7 C8 sing N N 340 NAG C7 N2 sing N N 341 NAG C7 O7 doub N N 342 NAG C8 H81 sing N N 343 NAG C8 H82 sing N N 344 NAG C8 H83 sing N N 345 NAG N2 HN2 sing N N 346 NAG O1 HO1 sing N N 347 NAG O3 HO3 sing N N 348 NAG O4 HO4 sing N N 349 NAG O6 HO6 sing N N 350 NDG C1 C2 sing N N 351 NDG C1 O5 sing N N 352 NDG C1 O1 sing N N 353 NDG C1 H1 sing N N 354 NDG C2 C3 sing N N 355 NDG C2 N2 sing N N 356 NDG C2 H2 sing N N 357 NDG C3 C4 sing N N 358 NDG C3 O3 sing N N 359 NDG C3 H3 sing N N 360 NDG C4 C5 sing N N 361 NDG C4 O4 sing N N 362 NDG C4 H4 sing N N 363 NDG C5 C6 sing N N 364 NDG C5 O5 sing N N 365 NDG C5 H5 sing N N 366 NDG C6 O6 sing N N 367 NDG C6 H61 sing N N 368 NDG C6 H62 sing N N 369 NDG C7 C8 sing N N 370 NDG C7 O7 doub N N 371 NDG C7 N2 sing N N 372 NDG C8 H81 sing N N 373 NDG C8 H82 sing N N 374 NDG C8 H83 sing N N 375 NDG O3 HO3 sing N N 376 NDG O4 HO4 sing N N 377 NDG O6 HO6 sing N N 378 NDG N2 HN2 sing N N 379 NDG O1 HO1 sing N N 380 PHE N CA sing N N 381 PHE N H sing N N 382 PHE N H2 sing N N 383 PHE CA C sing N N 384 PHE CA CB sing N N 385 PHE CA HA sing N N 386 PHE C O doub N N 387 PHE C OXT sing N N 388 PHE CB CG sing N N 389 PHE CB HB2 sing N N 390 PHE CB HB3 sing N N 391 PHE CG CD1 doub Y N 392 PHE CG CD2 sing Y N 393 PHE CD1 CE1 sing Y N 394 PHE CD1 HD1 sing N N 395 PHE CD2 CE2 doub Y N 396 PHE CD2 HD2 sing N N 397 PHE CE1 CZ doub Y N 398 PHE CE1 HE1 sing N N 399 PHE CE2 CZ sing Y N 400 PHE CE2 HE2 sing N N 401 PHE CZ HZ sing N N 402 PHE OXT HXT sing N N 403 PO4 P O1 doub N N 404 PO4 P O2 sing N N 405 PO4 P O3 sing N N 406 PO4 P O4 sing N N 407 PRO N CA sing N N 408 PRO N CD sing N N 409 PRO N H sing N N 410 PRO CA C sing N N 411 PRO CA CB sing N N 412 PRO CA HA sing N N 413 PRO C O doub N N 414 PRO C OXT sing N N 415 PRO CB CG sing N N 416 PRO CB HB2 sing N N 417 PRO CB HB3 sing N N 418 PRO CG CD sing N N 419 PRO CG HG2 sing N N 420 PRO CG HG3 sing N N 421 PRO CD HD2 sing N N 422 PRO CD HD3 sing N N 423 PRO OXT HXT sing N N 424 SER N CA sing N N 425 SER N H sing N N 426 SER N H2 sing N N 427 SER CA C sing N N 428 SER CA CB sing N N 429 SER CA HA sing N N 430 SER C O doub N N 431 SER C OXT sing N N 432 SER CB OG sing N N 433 SER CB HB2 sing N N 434 SER CB HB3 sing N N 435 SER OG HG sing N N 436 SER OXT HXT sing N N 437 THR N CA sing N N 438 THR N H sing N N 439 THR N H2 sing N N 440 THR CA C sing N N 441 THR CA CB sing N N 442 THR CA HA sing N N 443 THR C O doub N N 444 THR C OXT sing N N 445 THR CB OG1 sing N N 446 THR CB CG2 sing N N 447 THR CB HB sing N N 448 THR OG1 HG1 sing N N 449 THR CG2 HG21 sing N N 450 THR CG2 HG22 sing N N 451 THR CG2 HG23 sing N N 452 THR OXT HXT sing N N 453 TRP N CA sing N N 454 TRP N H sing N N 455 TRP N H2 sing N N 456 TRP CA C sing N N 457 TRP CA CB sing N N 458 TRP CA HA sing N N 459 TRP C O doub N N 460 TRP C OXT sing N N 461 TRP CB CG sing N N 462 TRP CB HB2 sing N N 463 TRP CB HB3 sing N N 464 TRP CG CD1 doub Y N 465 TRP CG CD2 sing Y N 466 TRP CD1 NE1 sing Y N 467 TRP CD1 HD1 sing N N 468 TRP CD2 CE2 doub Y N 469 TRP CD2 CE3 sing Y N 470 TRP NE1 CE2 sing Y N 471 TRP NE1 HE1 sing N N 472 TRP CE2 CZ2 sing Y N 473 TRP CE3 CZ3 doub Y N 474 TRP CE3 HE3 sing N N 475 TRP CZ2 CH2 doub Y N 476 TRP CZ2 HZ2 sing N N 477 TRP CZ3 CH2 sing Y N 478 TRP CZ3 HZ3 sing N N 479 TRP CH2 HH2 sing N N 480 TRP OXT HXT sing N N 481 TYR N CA sing N N 482 TYR N H sing N N 483 TYR N H2 sing N N 484 TYR CA C sing N N 485 TYR CA CB sing N N 486 TYR CA HA sing N N 487 TYR C O doub N N 488 TYR C OXT sing N N 489 TYR CB CG sing N N 490 TYR CB HB2 sing N N 491 TYR CB HB3 sing N N 492 TYR CG CD1 doub Y N 493 TYR CG CD2 sing Y N 494 TYR CD1 CE1 sing Y N 495 TYR CD1 HD1 sing N N 496 TYR CD2 CE2 doub Y N 497 TYR CD2 HD2 sing N N 498 TYR CE1 CZ doub Y N 499 TYR CE1 HE1 sing N N 500 TYR CE2 CZ sing Y N 501 TYR CE2 HE2 sing N N 502 TYR CZ OH sing N N 503 TYR OH HH sing N N 504 TYR OXT HXT sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 3 NAG 1 E NAG 1 X NAG 1 n E 3 NDG 2 E NDG 2 X NAG 3 n E 3 BMA 3 E BMA 3 X MAN 4 n E 3 MAN 4 E MAN 4 X MAN 5 n E 3 FUC 5 E FUC 5 X FUC 2 n F 4 NAG 1 F NAG 1 Z NAG 1 n F 4 NDG 2 F NDG 2 Z NAG 3 n F 4 FUC 3 F FUC 3 Z FUC 2 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'DManpa1-6DManpb1-4DGlcpNAca1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 3 ;WURCS=2.0/5,5,4/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-2-3-4-5/a4-b1_a6-e1_b4-c1_c6-d1 ; WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 4 'DGlcpNAca1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/3,3,2/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-3/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NDG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NDG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O6 HO6 sing ? 4 3 5 FUC C1 O1 1 NAG O6 HO6 sing ? 5 4 2 NDG C1 O1 1 NAG O4 HO4 sing ? 6 4 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NDG 2 n 3 BMA 3 n 3 MAN 4 n 3 FUC 5 n 4 NAG 1 n 4 NDG 2 n 4 FUC 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'PHOSPHATE ION' PO4 6 GLYCEROL GOL 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DOJ _pdbx_initial_refinement_model.details 'PDB ENTRY 1DOJ' #