data_1RDS # _entry.id 1RDS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1RDS WWPDB D_1000176042 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RDS _pdbx_database_status.recvd_initial_deposition_date 1993-05-14 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nonaka, T.' 1 'Nakamura, K.T.' 2 'Mitsui, Y.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue. ; Biochemistry 32 11825 11837 1993 BICHAW US 0006-2960 0033 ? 8218254 10.1021/bi00095a011 1 ;Three-Dimensional Structure of Ribonuclease Ms(Asterisk)3'-Guanylic Acid Complex at 2.5 Angstroms Resolution ; 'FEBS Lett.' 283 207 ? 1991 FEBLAL NE 0014-5793 0165 ? ? ? 2 'Histidine-40 of Ribonuclease T1 Acts as Base Catalyst When the True Catalytic Base, Glutamic Acid-58,is Replaced by Alanine' Biochemistry 29 9064 ? 1990 BICHAW US 0006-2960 0033 ? ? ? 3 ;Crystallization of a Complex between Ribonuclease Ms and 3'-Guanylic Acid ; J.Mol.Biol. 207 853 ? 1989 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nonaka, T.' 1 primary 'Nakamura, K.T.' 2 primary 'Uesugi, S.' 3 primary 'Ikehara, M.' 4 primary 'Irie, M.' 5 primary 'Mitsui, Y.' 6 1 'Nonaka, T.' 7 1 'Mitsui, Y.' 8 1 'Irie, M.' 9 1 'Nakamura, K.T.' 10 2 'Steyaert, J.' 11 2 'Hallenga, K.' 12 2 'Syns, L.' 13 2 'Stanssens, P.' 14 3 'Nonaka, T.' 15 3 'Mitsui, Y.' 16 3 'Nakamura, K.T.' 17 3 'Watanabe, H.' 18 3 'Ohgi, K.' 19 3 'Irie, M.' 20 # _cell.entry_id 1RDS _cell.length_a 46.520 _cell.length_b 60.570 _cell.length_c 34.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RDS _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RIBONUCLEASE MS' 11409.980 1 3.1.27.3 ? ? ? 2 non-polymer syn "2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE" 590.413 1 ? ? ? ? 3 water nat water 18.015 31 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ESCEYTCGSTCYWSSDVSAAKAKGYSLYESGDTIDDYPHEYHDYEGFDFPVSGTYYEYPIMSDYDVYTGGSPGADRVIFN GDDELAGVITHTGASGDDFVACSSS ; _entity_poly.pdbx_seq_one_letter_code_can ;ESCEYTCGSTCYWSSDVSAAKAKGYSLYESGDTIDDYPHEYHDYEGFDFPVSGTYYEYPIMSDYDVYTGGSPGADRVIFN GDDELAGVITHTGASGDDFVACSSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 SER n 1 3 CYS n 1 4 GLU n 1 5 TYR n 1 6 THR n 1 7 CYS n 1 8 GLY n 1 9 SER n 1 10 THR n 1 11 CYS n 1 12 TYR n 1 13 TRP n 1 14 SER n 1 15 SER n 1 16 ASP n 1 17 VAL n 1 18 SER n 1 19 ALA n 1 20 ALA n 1 21 LYS n 1 22 ALA n 1 23 LYS n 1 24 GLY n 1 25 TYR n 1 26 SER n 1 27 LEU n 1 28 TYR n 1 29 GLU n 1 30 SER n 1 31 GLY n 1 32 ASP n 1 33 THR n 1 34 ILE n 1 35 ASP n 1 36 ASP n 1 37 TYR n 1 38 PRO n 1 39 HIS n 1 40 GLU n 1 41 TYR n 1 42 HIS n 1 43 ASP n 1 44 TYR n 1 45 GLU n 1 46 GLY n 1 47 PHE n 1 48 ASP n 1 49 PHE n 1 50 PRO n 1 51 VAL n 1 52 SER n 1 53 GLY n 1 54 THR n 1 55 TYR n 1 56 TYR n 1 57 GLU n 1 58 TYR n 1 59 PRO n 1 60 ILE n 1 61 MET n 1 62 SER n 1 63 ASP n 1 64 TYR n 1 65 ASP n 1 66 VAL n 1 67 TYR n 1 68 THR n 1 69 GLY n 1 70 GLY n 1 71 SER n 1 72 PRO n 1 73 GLY n 1 74 ALA n 1 75 ASP n 1 76 ARG n 1 77 VAL n 1 78 ILE n 1 79 PHE n 1 80 ASN n 1 81 GLY n 1 82 ASP n 1 83 ASP n 1 84 GLU n 1 85 LEU n 1 86 ALA n 1 87 GLY n 1 88 VAL n 1 89 ILE n 1 90 THR n 1 91 HIS n 1 92 THR n 1 93 GLY n 1 94 ALA n 1 95 SER n 1 96 GLY n 1 97 ASP n 1 98 ASP n 1 99 PHE n 1 100 VAL n 1 101 ALA n 1 102 CYS n 1 103 SER n 1 104 SER n 1 105 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aspergillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aspergillus phoenicis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5063 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNMS_ASPSA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00653 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;ESCEYTCGSTCYWSSDVSAAKAKGYSLYESGDTIDDYPHGYHDYEGFDFPVSGTYYEYPIMSDYDVYTGGSPGADRVIFN GDDELAGVITHTGASGDDFVACSSS ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1RDS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00653 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 105 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 105 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1RDS _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 40 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00653 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 40 _struct_ref_seq_dif.details CONFLICT _struct_ref_seq_dif.pdbx_auth_seq_num 40 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GPC non-polymer . "2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE" ? 'C19 H24 F N8 O11 P' 590.413 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RDS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 42.98 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1RDS _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE FOLLOWING CRITERIA WERE ADOPTED FOR ASSIGNING MAIN-CHAIN HYDROGEN BONDS: THE MAXIMUM DISTANCE BETWEEN AN AMIDE HYDROGEN AND A CARBONYL OXYGEN IS 2.60 ANGSTROMS. THE MAXIMUM DISTANCE BETWEEN AN AMIDE NITROGEN AND A CARBONYL OXYGEN IS 3.35.ANGSTROMS. THE MINIMUM NHO ANGLE IS 100 DEGREES. THE MINIMUM COH ANGLE IS 100 DEGREES. THE MINIMUM CON ANGLE IS 100 DEGREES. THE ASSIGNMENT OF BETA-TURN TYPES IS BASED ON WILMOT AND THORNTON (C.M.WILMOT AND J.M.THORNTON, PROTEIN ENGINEERING, 3, 479-493, 1990). PHI, PSI ANGLES ARE ALLOWED TO DEVIATE BY 30 DEGREES FROM THEIR IDEAL VALUES. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 894 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.016 0.015 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.040 0.030 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.056 0.045 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 2.80 2.500 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 3.84 3.500 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 4.48 3.500 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 5.76 4.500 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.012 0.015 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.192 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.131 0.120 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.130 0.120 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.119 0.120 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.4 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 16.0 25.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 27.8 30.0 ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1RDS _struct.title ;CRYSTAL STRUCTURE OF RIBONUCLEASE MS (AS RIBONUCLEASE T1 HOMOLOGUE) COMPLEXED WITH A GUANYLYL-3',5'-CYTIDINE ANALOGUE ; _struct.pdbx_descriptor ;RIBONUCLEASE MS (E.C.3.1.27.3) COMPLEX WITH 2'-DEOXY-2'-FLUOROGUANYLYL-(3'-5')-CYTIDINE (A 2'-FLUORO ANALOGUE OF GUANYLYL-3',5'-CYTIDINE) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RDS _struct_keywords.pdbx_keywords 'HYDROLASE(ENDORIBONUCLEASE)' _struct_keywords.text 'HYDROLASE(ENDORIBONUCLEASE)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id A _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 14 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 30 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 14 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 30 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 11 SG ? ? A CYS 3 A CYS 11 1_555 ? ? ? ? ? ? ? 2.036 ? disulf2 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 102 SG ? ? A CYS 7 A CYS 102 1_555 ? ? ? ? ? ? ? 2.085 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 37 A . ? TYR 37 A PRO 38 A ? PRO 38 A 1 4.06 2 GLY 53 A . ? GLY 53 A THR 54 A ? THR 54 A 1 -0.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 2 ? S2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense S1 1 2 ? anti-parallel S2 1 2 ? anti-parallel S2 2 3 ? anti-parallel S2 3 4 ? anti-parallel S2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 GLU A 4 ? CYS A 7 ? GLU A 4 CYS A 7 S1 2 THR A 10 ? TYR A 12 ? THR A 10 TYR A 12 S2 1 HIS A 39 ? TYR A 41 ? HIS A 39 TYR A 41 S2 2 TYR A 55 ? ILE A 60 ? TYR A 55 ILE A 60 S2 3 ASP A 75 ? ASN A 80 ? ASP A 75 ASN A 80 S2 4 ASP A 83 ? THR A 90 ? ASP A 83 THR A 90 S2 5 VAL A 100 ? SER A 103 ? VAL A 100 SER A 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id S1 1 2 O TYR A 5 ? O TYR A 5 N TYR A 12 ? N TYR A 12 S2 1 2 O HIS A 39 ? O HIS A 39 N GLU A 57 ? N GLU A 57 S2 2 3 O TYR A 58 ? O TYR A 58 N VAL A 77 ? N VAL A 77 S2 3 4 O ILE A 78 ? O ILE A 78 N GLY A 87 ? N GLY A 87 S2 4 5 O VAL A 88 ? O VAL A 88 N CYS A 102 ? N CYS A 102 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 21 _struct_site.details 'BINDING SITE FOR RESIDUE GPC A 106' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 GLU A 1 ? GLU A 1 . ? 3_646 ? 2 AC1 21 TRP A 13 ? TRP A 13 . ? 3_646 ? 3 AC1 21 TYR A 37 ? TYR A 37 . ? 1_555 ? 4 AC1 21 HIS A 39 ? HIS A 39 . ? 1_555 ? 5 AC1 21 GLU A 40 ? GLU A 40 . ? 1_555 ? 6 AC1 21 TYR A 41 ? TYR A 41 . ? 1_555 ? 7 AC1 21 HIS A 42 ? HIS A 42 . ? 1_555 ? 8 AC1 21 ASP A 43 ? ASP A 43 . ? 1_555 ? 9 AC1 21 TYR A 44 ? TYR A 44 . ? 1_555 ? 10 AC1 21 GLU A 45 ? GLU A 45 . ? 1_555 ? 11 AC1 21 GLU A 57 ? GLU A 57 . ? 1_555 ? 12 AC1 21 PRO A 72 ? PRO A 72 . ? 1_555 ? 13 AC1 21 GLY A 73 ? GLY A 73 . ? 1_555 ? 14 AC1 21 ALA A 74 ? ALA A 74 . ? 1_555 ? 15 AC1 21 ARG A 76 ? ARG A 76 . ? 1_555 ? 16 AC1 21 HIS A 91 ? HIS A 91 . ? 1_555 ? 17 AC1 21 GLY A 96 ? GLY A 96 . ? 1_555 ? 18 AC1 21 ASP A 97 ? ASP A 97 . ? 1_555 ? 19 AC1 21 PHE A 99 ? PHE A 99 . ? 1_555 ? 20 AC1 21 CYS A 102 ? CYS A 102 . ? 4_567 ? 21 AC1 21 HOH C . ? HOH A 135 . ? 1_555 ? # _database_PDB_matrix.entry_id 1RDS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RDS _atom_sites.fract_transf_matrix[1][1] 0.021496 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016510 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028612 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'RESIDUE 38 IS A CIS PROLINE.' 2 'THE PEPTIDE LINKAGE GLY 53 - THR 54 IS IN THE CIS CONFORMATION.' # loop_ _atom_type.symbol C F N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 CYS 102 102 102 CYS CYS A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 SER 105 105 105 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GPC 1 106 106 GPC GPC A . C 3 HOH 1 107 107 HOH HOH A . C 3 HOH 2 108 108 HOH HOH A . C 3 HOH 3 109 109 HOH HOH A . C 3 HOH 4 110 110 HOH HOH A . C 3 HOH 5 111 111 HOH HOH A . C 3 HOH 6 112 112 HOH HOH A . C 3 HOH 7 113 113 HOH HOH A . C 3 HOH 8 114 114 HOH HOH A . C 3 HOH 9 115 115 HOH HOH A . C 3 HOH 10 116 116 HOH HOH A . C 3 HOH 11 117 117 HOH HOH A . C 3 HOH 12 118 118 HOH HOH A . C 3 HOH 13 119 119 HOH HOH A . C 3 HOH 14 120 120 HOH HOH A . C 3 HOH 15 121 121 HOH HOH A . C 3 HOH 16 122 122 HOH HOH A . C 3 HOH 17 123 123 HOH HOH A . C 3 HOH 18 124 124 HOH HOH A . C 3 HOH 19 125 125 HOH HOH A . C 3 HOH 20 126 126 HOH HOH A . C 3 HOH 21 127 127 HOH HOH A . C 3 HOH 22 128 128 HOH HOH A . C 3 HOH 23 129 129 HOH HOH A . C 3 HOH 24 130 130 HOH HOH A . C 3 HOH 25 131 131 HOH HOH A . C 3 HOH 26 132 132 HOH HOH A . C 3 HOH 27 133 133 HOH HOH A . C 3 HOH 28 134 134 HOH HOH A . C 3 HOH 29 135 135 HOH HOH A . C 3 HOH 30 136 136 HOH HOH A . C 3 HOH 31 137 137 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET ALA 86 (POSITION 1), GLY 87 (POSITION 2) AND ILE 78 (POSITION X) FORM A "CLASSIC TYPE" BETA BULGE. ALA 86 AND ILE 78 ALSO OCCUPY POSITIONS 3 AND X+1 OF A "WIDE TYPE" BETA BULGE (SEE REMARK 9). GLU 4 (POSITION 1), TYR 5 (POSITION 2) AND TYR 12 (POSITION X) FORM A "CLASSIC TYPE" BETA BULGE. GLU 84 (POSITION 0), LEU 85 (POSITION 1) ALA 86 (POSITION 3) ILE 78 (POSITION X-1), PHE 79 (POSITION X) AND ASN 80 (POSITION X+1) FORM A "WIDE TYPE" BETA BULGE. ; # _pdbx_entry_details.entry_id 1RDS _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;SEQUENCE ADVISORY NOTICE: DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE. SWISS-PROT ENTRY NAME: RNMS_ASPSA SWISS-PROT RESIDUE PDB SEQRES NAME NUMBER NAME CHAIN SEQ/INSERT CODE GLY 40 GLU 40 ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 12 ? ? CG A TYR 12 ? ? CD2 A TYR 12 ? ? 125.88 121.00 4.88 0.60 N 2 1 CB A TYR 12 ? ? CG A TYR 12 ? ? CD1 A TYR 12 ? ? 115.10 121.00 -5.90 0.60 N 3 1 OD1 A ASP 16 ? ? CG A ASP 16 ? ? OD2 A ASP 16 ? ? 137.67 123.30 14.37 1.90 N 4 1 CB A ASP 16 ? ? CG A ASP 16 ? ? OD2 A ASP 16 ? ? 107.76 118.30 -10.54 0.90 N 5 1 CB A TYR 28 ? ? CG A TYR 28 ? ? CD1 A TYR 28 ? ? 116.06 121.00 -4.94 0.60 N 6 1 CB A ASP 48 ? ? CA A ASP 48 ? ? C A ASP 48 ? ? 125.67 110.40 15.27 2.00 N 7 1 CB A TYR 55 ? ? CG A TYR 55 ? ? CD2 A TYR 55 ? ? 117.21 121.00 -3.79 0.60 N 8 1 NE A ARG 76 ? ? CZ A ARG 76 ? ? NH2 A ARG 76 ? ? 115.85 120.30 -4.45 0.50 N 9 1 CA A VAL 77 ? ? CB A VAL 77 ? ? CG1 A VAL 77 ? ? 121.16 110.90 10.26 1.50 N 10 1 CB A ASP 82 ? ? CG A ASP 82 ? ? OD1 A ASP 82 ? ? 111.69 118.30 -6.61 0.90 N 11 1 OE1 A GLU 84 ? ? CD A GLU 84 ? ? OE2 A GLU 84 ? ? 132.72 123.30 9.42 1.20 N 12 1 CA A CYS 102 ? ? CB A CYS 102 ? ? SG A CYS 102 ? ? 102.82 114.00 -11.18 1.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 43 ? ? 77.08 35.24 2 1 THR A 68 ? ? -143.66 27.16 3 1 ASP A 83 ? ? 71.31 30.02 4 1 SER A 104 ? ? -70.19 -86.08 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE" GPC 3 water HOH #