data_1RGO # _entry.id 1RGO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RGO pdb_00001rgo 10.2210/pdb1rgo/pdb RCSB RCSB020729 ? ? WWPDB D_1000020729 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-02 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' pdbx_struct_oper_list 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.value' 10 4 'Structure model' '_struct_conn.pdbx_dist_value' 11 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RGO _pdbx_database_status.recvd_initial_deposition_date 2003-11-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hudson, B.P.' 1 'Martinez-Yamout, M.A.' 2 'Dyson, H.J.' 3 'Wright, P.E.' 4 # _citation.id primary _citation.title 'Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d.' _citation.journal_abbrev NAT.STRUCT.MOL.BIOL. _citation.journal_volume 11 _citation.page_first 257 _citation.page_last 264 _citation.year 2004 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14981510 _citation.pdbx_database_id_DOI 10.1038/nsmb738 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hudson, B.P.' 1 ? primary 'Martinez-Yamout, M.A.' 2 ? primary 'Dyson, H.J.' 3 ? primary 'Wright, P.E.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*UP*UP*AP*UP*UP*UP*AP*UP*U)-3') ; 2756.615 1 ? ? ? ? 2 polymer man 'Butyrate response factor 2' 8315.448 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'TIS11D protein, EGF-response factor 2, ERF-2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no UUAUUUAUU UUAUUUAUU D ? 2 'polypeptide(L)' no no STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADE STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADE A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 U n 1 3 A n 1 4 U n 1 5 U n 1 6 U n 1 7 A n 1 8 U n 1 9 U n 2 1 SER n 2 2 THR n 2 3 ARG n 2 4 TYR n 2 5 LYS n 2 6 THR n 2 7 GLU n 2 8 LEU n 2 9 CYS n 2 10 ARG n 2 11 PRO n 2 12 PHE n 2 13 GLU n 2 14 GLU n 2 15 SER n 2 16 GLY n 2 17 THR n 2 18 CYS n 2 19 LYS n 2 20 TYR n 2 21 GLY n 2 22 GLU n 2 23 LYS n 2 24 CYS n 2 25 GLN n 2 26 PHE n 2 27 ALA n 2 28 HIS n 2 29 GLY n 2 30 PHE n 2 31 HIS n 2 32 GLU n 2 33 LEU n 2 34 ARG n 2 35 SER n 2 36 LEU n 2 37 THR n 2 38 ARG n 2 39 HIS n 2 40 PRO n 2 41 LYS n 2 42 TYR n 2 43 LYS n 2 44 THR n 2 45 GLU n 2 46 LEU n 2 47 CYS n 2 48 ARG n 2 49 THR n 2 50 PHE n 2 51 HIS n 2 52 THR n 2 53 ILE n 2 54 GLY n 2 55 PHE n 2 56 CYS n 2 57 PRO n 2 58 TYR n 2 59 GLY n 2 60 PRO n 2 61 ARG n 2 62 CYS n 2 63 HIS n 2 64 PHE n 2 65 ILE n 2 66 HIS n 2 67 ASN n 2 68 ALA n 2 69 ASP n 2 70 GLU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ZFP36L2, BRF2, TIS11D, ERF2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details Synthetic # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U D . n A 1 2 U 2 2 2 U U D . n A 1 3 A 3 3 3 A A D . n A 1 4 U 4 4 4 U U D . n A 1 5 U 5 5 5 U U D . n A 1 6 U 6 6 6 U U D . n A 1 7 A 7 7 7 A A D . n A 1 8 U 8 8 8 U U D . n A 1 9 U 9 9 9 U U D . n B 2 1 SER 1 151 151 SER SER A . n B 2 2 THR 2 152 152 THR THR A . n B 2 3 ARG 3 153 153 ARG ARG A . n B 2 4 TYR 4 154 154 TYR TYR A . n B 2 5 LYS 5 155 155 LYS LYS A . n B 2 6 THR 6 156 156 THR THR A . n B 2 7 GLU 7 157 157 GLU GLU A . n B 2 8 LEU 8 158 158 LEU LEU A . n B 2 9 CYS 9 159 159 CYS CYS A . n B 2 10 ARG 10 160 160 ARG ARG A . n B 2 11 PRO 11 161 161 PRO PRO A . n B 2 12 PHE 12 162 162 PHE PHE A . n B 2 13 GLU 13 163 163 GLU GLU A . n B 2 14 GLU 14 164 164 GLU GLU A . n B 2 15 SER 15 165 165 SER SER A . n B 2 16 GLY 16 166 166 GLY GLY A . n B 2 17 THR 17 167 167 THR THR A . n B 2 18 CYS 18 168 168 CYS CYS A . n B 2 19 LYS 19 169 169 LYS LYS A . n B 2 20 TYR 20 170 170 TYR TYR A . n B 2 21 GLY 21 171 171 GLY GLY A . n B 2 22 GLU 22 172 172 GLU GLU A . n B 2 23 LYS 23 173 173 LYS LYS A . n B 2 24 CYS 24 174 174 CYS CYS A . n B 2 25 GLN 25 175 175 GLN GLN A . n B 2 26 PHE 26 176 176 PHE PHE A . n B 2 27 ALA 27 177 177 ALA ALA A . n B 2 28 HIS 28 178 178 HIS HIS A . n B 2 29 GLY 29 179 179 GLY GLY A . n B 2 30 PHE 30 180 180 PHE PHE A . n B 2 31 HIS 31 181 181 HIS HIS A . n B 2 32 GLU 32 182 182 GLU GLU A . n B 2 33 LEU 33 183 183 LEU LEU A . n B 2 34 ARG 34 184 184 ARG ARG A . n B 2 35 SER 35 185 185 SER SER A . n B 2 36 LEU 36 186 186 LEU LEU A . n B 2 37 THR 37 187 187 THR THR A . n B 2 38 ARG 38 188 188 ARG ARG A . n B 2 39 HIS 39 189 189 HIS HIS A . n B 2 40 PRO 40 190 190 PRO PRO A . n B 2 41 LYS 41 191 191 LYS LYS A . n B 2 42 TYR 42 192 192 TYR TYR A . n B 2 43 LYS 43 193 193 LYS LYS A . n B 2 44 THR 44 194 194 THR THR A . n B 2 45 GLU 45 195 195 GLU GLU A . n B 2 46 LEU 46 196 196 LEU LEU A . n B 2 47 CYS 47 197 197 CYS CYS A . n B 2 48 ARG 48 198 198 ARG ARG A . n B 2 49 THR 49 199 199 THR THR A . n B 2 50 PHE 50 200 200 PHE PHE A . n B 2 51 HIS 51 201 201 HIS HIS A . n B 2 52 THR 52 202 202 THR THR A . n B 2 53 ILE 53 203 203 ILE ILE A . n B 2 54 GLY 54 204 204 GLY GLY A . n B 2 55 PHE 55 205 205 PHE PHE A . n B 2 56 CYS 56 206 206 CYS CYS A . n B 2 57 PRO 57 207 207 PRO PRO A . n B 2 58 TYR 58 208 208 TYR TYR A . n B 2 59 GLY 59 209 209 GLY GLY A . n B 2 60 PRO 60 210 210 PRO PRO A . n B 2 61 ARG 61 211 211 ARG ARG A . n B 2 62 CYS 62 212 212 CYS CYS A . n B 2 63 HIS 63 213 213 HIS HIS A . n B 2 64 PHE 64 214 214 PHE PHE A . n B 2 65 ILE 65 215 215 ILE ILE A . n B 2 66 HIS 66 216 216 HIS HIS A . n B 2 67 ASN 67 217 217 ASN ASN A . n B 2 68 ALA 68 218 218 ALA ALA A . n B 2 69 ASP 69 219 219 ASP ASP A . n B 2 70 GLU 70 220 220 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 221 1 ZN ZN A . D 3 ZN 1 222 1 ZN ZN A . # _exptl.entry_id 1RGO _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.density_Matthews ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1RGO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RGO _struct.title 'Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RGO _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;TIS11 TTP tristetraprolin butyrate response factor ERF Nup475 ZFP Zn zinc finger RNA ss single-stranded ARE UTR tandem intercalation intercalate specific, RNA BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TISD_HUMAN P47974 2 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADE 151 ? 2 PDB 1RGO 1RGO 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RGO A 1 ? 70 ? P47974 151 ? 220 ? 151 220 2 2 1RGO D 1 ? 9 ? 1RGO 1 ? 9 ? 1 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS B 9 ? GLY B 16 ? CYS A 159 GLY A 166 1 ? 8 HELX_P HELX_P2 2 TYR B 20 ? CYS B 24 ? TYR A 170 CYS A 174 5 ? 5 HELX_P HELX_P3 3 GLY B 29 ? LEU B 33 ? GLY A 179 LEU A 183 5 ? 5 HELX_P HELX_P4 4 CYS B 47 ? GLY B 54 ? CYS A 197 GLY A 204 1 ? 8 HELX_P HELX_P5 5 TYR B 58 ? CYS B 62 ? TYR A 208 CYS A 212 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B CYS 9 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 159 A ZN 221 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc2 metalc ? ? B CYS 18 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 168 A ZN 221 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc3 metalc ? ? B CYS 24 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 174 A ZN 221 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc4 metalc ? ? B HIS 28 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 178 A ZN 221 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc5 metalc ? ? B CYS 47 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 197 A ZN 222 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc6 metalc ? ? B CYS 56 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 206 A ZN 222 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc7 metalc ? ? B CYS 62 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 212 A ZN 222 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc8 metalc ? ? B HIS 66 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 216 A ZN 222 1_555 ? ? ? ? ? ? ? 2.080 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 9 ? A CYS 159 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 SG ? B CYS 18 ? A CYS 168 ? 1_555 112.1 ? 2 SG ? B CYS 9 ? A CYS 159 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 SG ? B CYS 24 ? A CYS 174 ? 1_555 108.5 ? 3 SG ? B CYS 18 ? A CYS 168 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 SG ? B CYS 24 ? A CYS 174 ? 1_555 108.1 ? 4 SG ? B CYS 9 ? A CYS 159 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 NE2 ? B HIS 28 ? A HIS 178 ? 1_555 112.2 ? 5 SG ? B CYS 18 ? A CYS 168 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 NE2 ? B HIS 28 ? A HIS 178 ? 1_555 107.3 ? 6 SG ? B CYS 24 ? A CYS 174 ? 1_555 ZN ? C ZN . ? A ZN 221 ? 1_555 NE2 ? B HIS 28 ? A HIS 178 ? 1_555 108.5 ? 7 SG ? B CYS 47 ? A CYS 197 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 SG ? B CYS 56 ? A CYS 206 ? 1_555 111.1 ? 8 SG ? B CYS 47 ? A CYS 197 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 SG ? B CYS 62 ? A CYS 212 ? 1_555 109.6 ? 9 SG ? B CYS 56 ? A CYS 206 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 SG ? B CYS 62 ? A CYS 212 ? 1_555 110.4 ? 10 SG ? B CYS 47 ? A CYS 197 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 NE2 ? B HIS 66 ? A HIS 216 ? 1_555 111.8 ? 11 SG ? B CYS 56 ? A CYS 206 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 NE2 ? B HIS 66 ? A HIS 216 ? 1_555 107.2 ? 12 SG ? B CYS 62 ? A CYS 212 ? 1_555 ZN ? D ZN . ? A ZN 222 ? 1_555 NE2 ? B HIS 66 ? A HIS 216 ? 1_555 106.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 221 ? 4 'BINDING SITE FOR RESIDUE ZN A 221' AC2 Software A ZN 222 ? 4 'BINDING SITE FOR RESIDUE ZN A 222' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS B 9 ? CYS A 159 . ? 1_555 ? 2 AC1 4 CYS B 18 ? CYS A 168 . ? 1_555 ? 3 AC1 4 CYS B 24 ? CYS A 174 . ? 1_555 ? 4 AC1 4 HIS B 28 ? HIS A 178 . ? 1_555 ? 5 AC2 4 CYS B 47 ? CYS A 197 . ? 1_555 ? 6 AC2 4 CYS B 56 ? CYS A 206 . ? 1_555 ? 7 AC2 4 CYS B 62 ? CYS A 212 . ? 1_555 ? 8 AC2 4 HIS B 66 ? HIS A 216 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.98 117.00 -3.02 0.50 N 2 1 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.31 117.70 3.61 0.50 N 3 1 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.42 118.60 -5.18 0.60 N 4 1 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.91 117.00 -3.09 0.50 N 5 1 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.61 117.70 3.91 0.50 N 6 1 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.44 118.60 -4.16 0.60 N 7 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 123.45 120.30 3.15 0.50 N 8 2 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.36 117.70 3.66 0.50 N 9 2 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.76 118.60 -4.84 0.60 N 10 2 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.85 117.00 -3.15 0.50 N 11 2 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.64 117.70 3.94 0.50 N 12 2 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.29 118.60 -4.31 0.60 N 13 3 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.87 117.00 -3.13 0.50 N 14 3 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.26 117.70 3.56 0.50 N 15 3 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.28 118.60 -5.32 0.60 N 16 3 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.91 117.00 -3.09 0.50 N 17 3 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.69 117.70 3.99 0.50 N 18 3 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.30 118.60 -4.30 0.60 N 19 3 "O4'" D U 8 ? ? "C1'" D U 8 ? ? N1 D U 8 ? ? 112.81 108.50 4.31 0.70 N 20 3 NE A ARG 188 ? ? CZ A ARG 188 ? ? NH1 A ARG 188 ? ? 123.44 120.30 3.14 0.50 N 21 3 NE A ARG 198 ? ? CZ A ARG 198 ? ? NH1 A ARG 198 ? ? 123.51 120.30 3.21 0.50 N 22 4 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.70 117.00 -3.30 0.50 N 23 4 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.17 117.70 3.47 0.50 N 24 4 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.23 118.60 -5.37 0.60 N 25 4 "O4'" D U 4 ? ? "C1'" D U 4 ? ? N1 D U 4 ? ? 113.35 108.50 4.85 0.70 N 26 4 "C1'" D U 6 ? ? "O4'" D U 6 ? ? "C4'" D U 6 ? ? 105.41 109.70 -4.29 0.70 N 27 4 "O4'" D U 6 ? ? "C1'" D U 6 ? ? N1 D U 6 ? ? 113.93 108.50 5.43 0.70 N 28 4 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.59 117.70 3.89 0.50 N 29 4 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.24 118.60 -4.36 0.60 N 30 4 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH1 A ARG 153 ? ? 123.39 120.30 3.09 0.50 N 31 5 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.82 117.00 -3.18 0.50 N 32 5 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.23 117.70 3.53 0.50 N 33 5 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.12 118.60 -5.48 0.60 N 34 5 "O4'" D U 6 ? ? "C1'" D U 6 ? ? N1 D U 6 ? ? 112.73 108.50 4.23 0.70 N 35 5 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.98 117.00 -3.02 0.50 N 36 5 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.43 117.70 3.73 0.50 N 37 5 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.31 118.60 -4.29 0.60 N 38 5 "O4'" D U 8 ? ? "C1'" D U 8 ? ? N1 D U 8 ? ? 113.10 108.50 4.60 0.70 N 39 6 "C1'" D U 2 ? ? "O4'" D U 2 ? ? "C4'" D U 2 ? ? 104.74 109.70 -4.96 0.70 N 40 6 "O4'" D U 2 ? ? "C1'" D U 2 ? ? N1 D U 2 ? ? 113.89 108.50 5.39 0.70 N 41 6 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.92 117.00 -3.08 0.50 N 42 6 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.36 117.70 3.66 0.50 N 43 6 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.53 118.60 -5.07 0.60 N 44 6 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.52 117.70 3.82 0.50 N 45 6 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.21 118.60 -4.39 0.60 N 46 6 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 123.70 120.30 3.40 0.50 N 47 6 NE A ARG 198 ? ? CZ A ARG 198 ? ? NH1 A ARG 198 ? ? 123.73 120.30 3.43 0.50 N 48 7 "O4'" D U 2 ? ? "C1'" D U 2 ? ? N1 D U 2 ? ? 112.85 108.50 4.35 0.70 N 49 7 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.12 117.70 3.42 0.50 N 50 7 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.45 118.60 -5.15 0.60 N 51 7 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.43 117.70 3.73 0.50 N 52 7 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.87 118.60 -4.73 0.60 N 53 7 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH1 A ARG 153 ? ? 123.51 120.30 3.21 0.50 N 54 7 NE A ARG 211 ? ? CZ A ARG 211 ? ? NH1 A ARG 211 ? ? 123.59 120.30 3.29 0.50 N 55 8 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.07 117.70 3.37 0.50 N 56 8 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.87 118.60 -4.73 0.60 N 57 8 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.92 117.00 -3.08 0.50 N 58 8 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.45 117.70 3.75 0.50 N 59 8 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.64 118.60 -4.96 0.60 N 60 8 NE A ARG 188 ? ? CZ A ARG 188 ? ? NH1 A ARG 188 ? ? 123.71 120.30 3.41 0.50 N 61 8 NE A ARG 211 ? ? CZ A ARG 211 ? ? NH1 A ARG 211 ? ? 123.87 120.30 3.57 0.50 N 62 9 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.95 117.00 -3.05 0.50 N 63 9 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.41 117.70 3.71 0.50 N 64 9 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.25 118.60 -5.35 0.60 N 65 9 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.33 117.70 3.63 0.50 N 66 9 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.38 118.60 -4.22 0.60 N 67 9 NE A ARG 198 ? ? CZ A ARG 198 ? ? NH1 A ARG 198 ? ? 124.34 120.30 4.04 0.50 N 68 10 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.38 117.70 3.68 0.50 N 69 10 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.67 118.60 -4.93 0.60 N 70 10 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.89 117.00 -3.11 0.50 N 71 10 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.55 117.70 3.85 0.50 N 72 10 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.96 118.60 -4.64 0.60 N 73 11 "O4'" D U 2 ? ? "C1'" D U 2 ? ? N1 D U 2 ? ? 113.23 108.50 4.73 0.70 N 74 11 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.96 117.00 -3.04 0.50 N 75 11 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.27 117.70 3.57 0.50 N 76 11 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.80 118.60 -4.80 0.60 N 77 11 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.59 117.70 3.89 0.50 N 78 11 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.26 118.60 -4.34 0.60 N 79 11 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH1 A ARG 153 ? ? 123.86 120.30 3.56 0.50 N 80 12 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.92 117.00 -3.08 0.50 N 81 12 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.24 117.70 3.54 0.50 N 82 12 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 114.15 118.60 -4.45 0.60 N 83 12 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.55 117.70 3.85 0.50 N 84 12 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.06 118.60 -4.54 0.60 N 85 12 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 123.91 120.30 3.61 0.50 N 86 12 NE A ARG 211 ? ? CZ A ARG 211 ? ? NH1 A ARG 211 ? ? 124.04 120.30 3.74 0.50 N 87 13 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.83 117.00 -3.17 0.50 N 88 13 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.25 117.70 3.55 0.50 N 89 13 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.54 118.60 -5.06 0.60 N 90 13 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.78 117.00 -3.22 0.50 N 91 13 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.78 117.70 4.08 0.50 N 92 13 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.82 118.60 -4.78 0.60 N 93 13 NE A ARG 160 ? ? CZ A ARG 160 ? ? NH1 A ARG 160 ? ? 123.31 120.30 3.01 0.50 N 94 13 NE A ARG 188 ? ? CZ A ARG 188 ? ? NH1 A ARG 188 ? ? 123.30 120.30 3.00 0.50 N 95 14 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.82 117.00 -3.18 0.50 N 96 14 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.40 117.70 3.70 0.50 N 97 14 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.40 118.60 -5.20 0.60 N 98 14 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.40 117.70 3.70 0.50 N 99 14 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.59 118.60 -5.01 0.60 N 100 14 "O4'" D U 8 ? ? "C1'" D U 8 ? ? N1 D U 8 ? ? 112.73 108.50 4.23 0.70 N 101 14 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 123.35 120.30 3.05 0.50 N 102 15 "O4'" D U 2 ? ? "C1'" D U 2 ? ? N1 D U 2 ? ? 115.05 108.50 6.55 0.70 N 103 15 N3 D U 2 ? ? C2 D U 2 ? ? O2 D U 2 ? ? 117.57 122.20 -4.63 0.70 N 104 15 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.82 117.00 -3.18 0.50 N 105 15 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.17 117.70 3.47 0.50 N 106 15 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 112.81 118.60 -5.79 0.60 N 107 15 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.96 117.00 -3.04 0.50 N 108 15 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.52 117.70 3.82 0.50 N 109 15 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.03 118.60 -4.57 0.60 N 110 16 "O4'" D U 2 ? ? "C1'" D U 2 ? ? N1 D U 2 ? ? 113.44 108.50 4.94 0.70 N 111 16 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.87 117.00 -3.13 0.50 N 112 16 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.31 117.70 3.61 0.50 N 113 16 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.41 118.60 -5.19 0.60 N 114 16 C4 D A 7 ? ? C5 D A 7 ? ? C6 D A 7 ? ? 113.89 117.00 -3.11 0.50 N 115 16 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.66 117.70 3.96 0.50 N 116 16 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.14 118.60 -4.46 0.60 N 117 17 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.94 117.00 -3.06 0.50 N 118 17 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.32 117.70 3.62 0.50 N 119 17 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.51 118.60 -5.09 0.60 N 120 17 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.55 117.70 3.85 0.50 N 121 17 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.23 118.60 -4.37 0.60 N 122 18 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.77 117.00 -3.23 0.50 N 123 18 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.12 117.70 3.42 0.50 N 124 18 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.32 118.60 -5.28 0.60 N 125 18 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.36 117.70 3.66 0.50 N 126 18 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 113.88 118.60 -4.72 0.60 N 127 18 "O4'" D U 8 ? ? "C1'" D U 8 ? ? N1 D U 8 ? ? 113.13 108.50 4.63 0.70 N 128 18 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH1 A ARG 153 ? ? 124.03 120.30 3.73 0.50 N 129 18 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 123.53 120.30 3.23 0.50 N 130 19 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.77 117.00 -3.23 0.50 N 131 19 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.28 117.70 3.58 0.50 N 132 19 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.33 118.60 -5.27 0.60 N 133 19 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.40 117.70 3.70 0.50 N 134 19 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.08 118.60 -4.52 0.60 N 135 19 NE A ARG 188 ? ? CZ A ARG 188 ? ? NH1 A ARG 188 ? ? 123.37 120.30 3.07 0.50 N 136 20 C4 D A 3 ? ? C5 D A 3 ? ? C6 D A 3 ? ? 113.87 117.00 -3.13 0.50 N 137 20 C5 D A 3 ? ? C6 D A 3 ? ? N1 D A 3 ? ? 121.10 117.70 3.40 0.50 N 138 20 N1 D A 3 ? ? C6 D A 3 ? ? N6 D A 3 ? ? 113.01 118.60 -5.59 0.60 N 139 20 C5 D A 7 ? ? C6 D A 7 ? ? N1 D A 7 ? ? 121.48 117.70 3.78 0.50 N 140 20 N1 D A 7 ? ? C6 D A 7 ? ? N6 D A 7 ? ? 114.58 118.60 -4.02 0.60 N 141 20 "O4'" D U 8 ? ? "C1'" D U 8 ? ? N1 D U 8 ? ? 112.87 108.50 4.37 0.70 N 142 20 NE A ARG 188 ? ? CZ A ARG 188 ? ? NH1 A ARG 188 ? ? 123.56 120.30 3.26 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 216 ? ? -88.59 -94.09 2 2 HIS A 216 ? ? -86.65 -95.01 3 3 HIS A 216 ? ? -89.64 -95.75 4 4 HIS A 216 ? ? -91.70 -95.62 5 5 HIS A 216 ? ? -85.98 -90.23 6 6 HIS A 216 ? ? -93.46 -93.96 7 7 HIS A 216 ? ? -96.00 -97.28 8 8 HIS A 216 ? ? -89.38 -95.26 9 9 HIS A 216 ? ? -83.77 -97.29 10 10 HIS A 216 ? ? -87.19 -98.46 11 11 HIS A 216 ? ? -90.71 -95.26 12 12 HIS A 216 ? ? -82.79 -92.57 13 12 ALA A 218 ? ? -69.33 97.24 14 13 HIS A 216 ? ? -89.72 -94.61 15 14 HIS A 216 ? ? -87.24 -97.53 16 15 HIS A 216 ? ? -90.72 -94.50 17 16 HIS A 216 ? ? -89.80 -94.50 18 17 ARG A 153 ? ? -82.20 42.08 19 17 HIS A 216 ? ? -88.52 -89.17 20 18 HIS A 216 ? ? -89.54 -87.30 21 18 ALA A 218 ? ? -92.35 -94.51 22 19 HIS A 216 ? ? -82.79 -89.78 23 20 ARG A 153 ? ? -81.10 41.66 24 20 HIS A 216 ? ? -91.74 -87.72 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 A D 7 ? ? 0.096 'SIDE CHAIN' 2 2 U D 5 ? ? 0.072 'SIDE CHAIN' 3 2 A D 7 ? ? 0.074 'SIDE CHAIN' 4 4 U D 4 ? ? 0.079 'SIDE CHAIN' 5 4 U D 5 ? ? 0.057 'SIDE CHAIN' 6 4 A D 7 ? ? 0.077 'SIDE CHAIN' 7 6 A D 3 ? ? 0.057 'SIDE CHAIN' 8 6 A D 7 ? ? 0.062 'SIDE CHAIN' 9 7 U D 5 ? ? 0.079 'SIDE CHAIN' 10 7 A D 7 ? ? 0.113 'SIDE CHAIN' 11 8 A D 3 ? ? 0.082 'SIDE CHAIN' 12 8 U D 6 ? ? 0.071 'SIDE CHAIN' 13 8 A D 7 ? ? 0.077 'SIDE CHAIN' 14 9 A D 7 ? ? 0.084 'SIDE CHAIN' 15 10 U D 2 ? ? 0.069 'SIDE CHAIN' 16 10 U D 6 ? ? 0.062 'SIDE CHAIN' 17 10 A D 7 ? ? 0.070 'SIDE CHAIN' 18 11 U D 2 ? ? 0.072 'SIDE CHAIN' 19 11 A D 3 ? ? 0.061 'SIDE CHAIN' 20 11 U D 6 ? ? 0.097 'SIDE CHAIN' 21 11 A D 7 ? ? 0.066 'SIDE CHAIN' 22 12 A D 3 ? ? 0.092 'SIDE CHAIN' 23 12 U D 6 ? ? 0.075 'SIDE CHAIN' 24 12 A D 7 ? ? 0.064 'SIDE CHAIN' 25 13 U D 6 ? ? 0.066 'SIDE CHAIN' 26 13 TYR A 170 ? ? 0.077 'SIDE CHAIN' 27 14 U D 2 ? ? 0.071 'SIDE CHAIN' 28 14 U D 6 ? ? 0.079 'SIDE CHAIN' 29 14 A D 7 ? ? 0.100 'SIDE CHAIN' 30 15 U D 2 ? ? 0.149 'SIDE CHAIN' 31 15 A D 7 ? ? 0.069 'SIDE CHAIN' 32 16 U D 2 ? ? 0.076 'SIDE CHAIN' 33 16 A D 7 ? ? 0.058 'SIDE CHAIN' 34 17 U D 6 ? ? 0.078 'SIDE CHAIN' 35 17 A D 7 ? ? 0.081 'SIDE CHAIN' 36 18 U D 6 ? ? 0.058 'SIDE CHAIN' 37 18 A D 7 ? ? 0.071 'SIDE CHAIN' 38 19 U D 6 ? ? 0.080 'SIDE CHAIN' 39 19 A D 7 ? ? 0.070 'SIDE CHAIN' 40 20 A D 3 ? ? 0.084 'SIDE CHAIN' 41 20 U D 6 ? ? 0.079 'SIDE CHAIN' 42 20 A D 7 ? ? 0.074 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 1RGO _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1RGO _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 ;0.5 mM 15N-TIS11d TZF; 0.5 mM 5'-UUAUUUAUU-3'; 10 mM Tris pH 6.2; 20 mM KCl; 2.5 mM DTT; 25 uM ZnSO4 ; '95% H2O, 5% D20' 2 ;0.5 mM 15N,13C-TIS11d TZF; 0.5 mM 5'-UUAUUUAUU-3'; 10 mM Tris pH 6.2; 20 mM KCl; 2.5 mM DTT; 25 uM ZnSO4 ; '95% H2O/5% D2O' 3 ;0.5 mM 15N,13C-TIS11d TZF; 0.5 mM 5'-UUAUUUAUU-3'; 10 mM Tris-d11 pD 6.2; 20 mM KCl; 2.5 mM DTT-d10; 25 uM ZnSO4 ; '100% D2O' 4 ;0.5 mM 15N,13C-TIS11d TZF; 0.5 mM 5'-UUAUUUAUU-3'; 10 mM Tris pH 6.2; 20 mM KCl; 2.5 mM DTT; 25 uM ZnSO4; 12 mg/mL Pf1 bacteriophage ; '95% H2O/5% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.2 _pdbx_nmr_exptl_sample_conditions.ionic_strength '20 mM KCl' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 3 1 3D_13C-separated_NOESY 3 3 1 '3D 13C F1-edited, F3-filtered NOESY' 4 3 1 '2D 13C double-half-filtered NOESY' 5 1 1 HNHA 6 1 1 HNHB 7 3 1 'HACAHB COSY' 8 3 1 '13C-{13CO} spin-echo difference CT-HSQC' 9 3 1 '13C-{15N} spin-echo difference CT-HSQC' 10 4 1 'IPAP-[1H-15N]-HSQC' # _pdbx_nmr_refine.entry_id 1RGO _pdbx_nmr_refine.method ;Individual zinc finger domains were created in DYANA and docked to UAUU (finger I) and UUAUU (finger II) using five rounds of simulated annealing in AMBER using distance and torsional restraints. Finger I/UAUU and Finger II/UUAUU complexes were connected to form TZF/UUAUUUAUU complexes and refined in AMBER with residual dipolar coupling restraints added. Calculations were then switched from in vacuo to Generalized Born continuum solvent model and one additional round of simulated annealing was performed. ; _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR various collection Bruker 1 NMRPipe ? processing 'Delaglio, F.; Grzesiek, S.; Vuister, G. W.; Zhu, G.; Pfeifer J.; Bax, A.' 2 NMRView 5.0 'data analysis' 'Johnson, B. A. & Blevins, R. A.' 3 SANE ? 'data analysis' 'Duggan, B. M.' 4 DYANA 1.5 'structure solution' 'Guntert, P.; Mumenthaler, C.; Wuthrich, K.' 5 Amber 8 'structure solution' 'Case, D. A., et al.' 6 Amber 8 refinement 'Case, D. A., et al.' 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LEU N N N N 217 LEU CA C N S 218 LEU C C N N 219 LEU O O N N 220 LEU CB C N N 221 LEU CG C N N 222 LEU CD1 C N N 223 LEU CD2 C N N 224 LEU OXT O N N 225 LEU H H N N 226 LEU H2 H N N 227 LEU HA H N N 228 LEU HB2 H N N 229 LEU HB3 H N N 230 LEU HG H N N 231 LEU HD11 H N N 232 LEU HD12 H N N 233 LEU HD13 H N N 234 LEU HD21 H N N 235 LEU HD22 H N N 236 LEU HD23 H N N 237 LEU HXT H N N 238 LYS N N N N 239 LYS CA C N S 240 LYS C C N N 241 LYS O O N N 242 LYS CB C N N 243 LYS CG C N N 244 LYS CD C N N 245 LYS CE C N N 246 LYS NZ N N N 247 LYS OXT O N N 248 LYS H H N N 249 LYS H2 H N N 250 LYS HA H N N 251 LYS HB2 H N N 252 LYS HB3 H N N 253 LYS HG2 H N N 254 LYS HG3 H N N 255 LYS HD2 H N N 256 LYS HD3 H N N 257 LYS HE2 H N N 258 LYS HE3 H N N 259 LYS HZ1 H N N 260 LYS HZ2 H N N 261 LYS HZ3 H N N 262 LYS HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 U OP3 O N N 359 U P P N N 360 U OP1 O N N 361 U OP2 O N N 362 U "O5'" O N N 363 U "C5'" C N N 364 U "C4'" C N R 365 U "O4'" O N N 366 U "C3'" C N S 367 U "O3'" O N N 368 U "C2'" C N R 369 U "O2'" O N N 370 U "C1'" C N R 371 U N1 N N N 372 U C2 C N N 373 U O2 O N N 374 U N3 N N N 375 U C4 C N N 376 U O4 O N N 377 U C5 C N N 378 U C6 C N N 379 U HOP3 H N N 380 U HOP2 H N N 381 U "H5'" H N N 382 U "H5''" H N N 383 U "H4'" H N N 384 U "H3'" H N N 385 U "HO3'" H N N 386 U "H2'" H N N 387 U "HO2'" H N N 388 U "H1'" H N N 389 U H3 H N N 390 U H5 H N N 391 U H6 H N N 392 ZN ZN ZN N N 393 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 PHE N CA sing N N 255 PHE N H sing N N 256 PHE N H2 sing N N 257 PHE CA C sing N N 258 PHE CA CB sing N N 259 PHE CA HA sing N N 260 PHE C O doub N N 261 PHE C OXT sing N N 262 PHE CB CG sing N N 263 PHE CB HB2 sing N N 264 PHE CB HB3 sing N N 265 PHE CG CD1 doub Y N 266 PHE CG CD2 sing Y N 267 PHE CD1 CE1 sing Y N 268 PHE CD1 HD1 sing N N 269 PHE CD2 CE2 doub Y N 270 PHE CD2 HD2 sing N N 271 PHE CE1 CZ doub Y N 272 PHE CE1 HE1 sing N N 273 PHE CE2 CZ sing Y N 274 PHE CE2 HE2 sing N N 275 PHE CZ HZ sing N N 276 PHE OXT HXT sing N N 277 PRO N CA sing N N 278 PRO N CD sing N N 279 PRO N H sing N N 280 PRO CA C sing N N 281 PRO CA CB sing N N 282 PRO CA HA sing N N 283 PRO C O doub N N 284 PRO C OXT sing N N 285 PRO CB CG sing N N 286 PRO CB HB2 sing N N 287 PRO CB HB3 sing N N 288 PRO CG CD sing N N 289 PRO CG HG2 sing N N 290 PRO CG HG3 sing N N 291 PRO CD HD2 sing N N 292 PRO CD HD3 sing N N 293 PRO OXT HXT sing N N 294 SER N CA sing N N 295 SER N H sing N N 296 SER N H2 sing N N 297 SER CA C sing N N 298 SER CA CB sing N N 299 SER CA HA sing N N 300 SER C O doub N N 301 SER C OXT sing N N 302 SER CB OG sing N N 303 SER CB HB2 sing N N 304 SER CB HB3 sing N N 305 SER OG HG sing N N 306 SER OXT HXT sing N N 307 THR N CA sing N N 308 THR N H sing N N 309 THR N H2 sing N N 310 THR CA C sing N N 311 THR CA CB sing N N 312 THR CA HA sing N N 313 THR C O doub N N 314 THR C OXT sing N N 315 THR CB OG1 sing N N 316 THR CB CG2 sing N N 317 THR CB HB sing N N 318 THR OG1 HG1 sing N N 319 THR CG2 HG21 sing N N 320 THR CG2 HG22 sing N N 321 THR CG2 HG23 sing N N 322 THR OXT HXT sing N N 323 TYR N CA sing N N 324 TYR N H sing N N 325 TYR N H2 sing N N 326 TYR CA C sing N N 327 TYR CA CB sing N N 328 TYR CA HA sing N N 329 TYR C O doub N N 330 TYR C OXT sing N N 331 TYR CB CG sing N N 332 TYR CB HB2 sing N N 333 TYR CB HB3 sing N N 334 TYR CG CD1 doub Y N 335 TYR CG CD2 sing Y N 336 TYR CD1 CE1 sing Y N 337 TYR CD1 HD1 sing N N 338 TYR CD2 CE2 doub Y N 339 TYR CD2 HD2 sing N N 340 TYR CE1 CZ doub Y N 341 TYR CE1 HE1 sing N N 342 TYR CE2 CZ sing Y N 343 TYR CE2 HE2 sing N N 344 TYR CZ OH sing N N 345 TYR OH HH sing N N 346 TYR OXT HXT sing N N 347 U OP3 P sing N N 348 U OP3 HOP3 sing N N 349 U P OP1 doub N N 350 U P OP2 sing N N 351 U P "O5'" sing N N 352 U OP2 HOP2 sing N N 353 U "O5'" "C5'" sing N N 354 U "C5'" "C4'" sing N N 355 U "C5'" "H5'" sing N N 356 U "C5'" "H5''" sing N N 357 U "C4'" "O4'" sing N N 358 U "C4'" "C3'" sing N N 359 U "C4'" "H4'" sing N N 360 U "O4'" "C1'" sing N N 361 U "C3'" "O3'" sing N N 362 U "C3'" "C2'" sing N N 363 U "C3'" "H3'" sing N N 364 U "O3'" "HO3'" sing N N 365 U "C2'" "O2'" sing N N 366 U "C2'" "C1'" sing N N 367 U "C2'" "H2'" sing N N 368 U "O2'" "HO2'" sing N N 369 U "C1'" N1 sing N N 370 U "C1'" "H1'" sing N N 371 U N1 C2 sing N N 372 U N1 C6 sing N N 373 U C2 O2 doub N N 374 U C2 N3 sing N N 375 U N3 C4 sing N N 376 U N3 H3 sing N N 377 U C4 O4 doub N N 378 U C4 C5 sing N N 379 U C5 C6 doub N N 380 U C5 H5 sing N N 381 U C6 H6 sing N N 382 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker AVANCE 600 2 ? Bruker DMX 750 3 ? Bruker AVANCE 900 # _atom_sites.entry_id 1RGO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_