HEADER INHIBITOR 12-OCT-96 1RHO TITLE STRUCTURE OF RHO GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GDP-DISSOCIATION INHIBITOR 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: RHO GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR, RHOGDI; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HUMAN RHOGDI CDNA LOCUS HUMRH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX2T; SOURCE 9 EXPRESSION_SYSTEM_GENE: HUMAN RHOGDI CDNA, LOCUS HUMRHOGDP M97579 KEYWDS GTPASE ACTIVATION, PHOSPHORYLATION, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR N.H.KEEP,P.C.E.MOODY,G.C.K.ROBERTS REVDAT 4 14-AUG-19 1RHO 1 REMARK REVDAT 3 17-JUL-19 1RHO 1 REMARK LINK REVDAT 2 24-FEB-09 1RHO 1 VERSN REVDAT 1 15-OCT-97 1RHO 0 JRNL AUTH N.H.KEEP,M.BARNES,I.BARSUKOV,R.BADII,L.Y.LIAN,A.W.SEGAL, JRNL AUTH 2 P.C.MOODY,G.C.ROBERTS JRNL TITL A MODULATOR OF RHO FAMILY G PROTEINS, RHOGDI, BINDS THESE G JRNL TITL 2 PROTEINS VIA AN IMMUNOGLOBULIN-LIKE DOMAIN AND A FLEXIBLE JRNL TITL 3 N-TERMINAL ARM. JRNL REF STRUCTURE V. 5 623 1997 JRNL REFN ISSN 0969-2126 JRNL PMID 9195882 JRNL DOI 10.1016/S0969-2126(97)00218-9 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.1000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 19482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SHELLS REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1000 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3099 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE : 0.4010 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 169 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.30 REMARK 3 LOW RESOLUTION CUTOFF (A) : 8.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.940 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.460 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.040 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.990 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : EXTRAPARA.PRO REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : EXTRATOP.PRO REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 SELENOMETHIONINE DATA WAS STRONGER AND THEREFORE USED FOR REMARK 3 REFINEMENT. REMARK 4 REMARK 4 1RHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176090. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20345 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.25400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR WITH ANOMALOUS REMARK 200 SOFTWARE USED: SHELX, X-PLOR 3.843 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M NH4 SO4 0.1 M TRIS PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 78.28500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.19787 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 44.19667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 78.28500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 45.19787 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 44.19667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 78.28500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 45.19787 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 44.19667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 78.28500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 45.19787 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 44.19667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 78.28500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 45.19787 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 44.19667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 78.28500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 45.19787 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 44.19667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 90.39573 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 88.39333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 90.39573 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 88.39333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 90.39573 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 88.39333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 90.39573 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 88.39333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 90.39573 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 88.39333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 90.39573 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 88.39333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8, 9 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 78.28500 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 45.19787 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.19667 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -267.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -272.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 78.28500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 135.59360 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -78.28500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 135.59360 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 -78.28500 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 45.19787 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 44.19667 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 180.79146 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 44.19667 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 78.28500 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 45.19787 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 44.19667 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -78.28500 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 45.19787 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.19667 REMARK 350 REMARK 350 BIOMOLECULE: 9 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL C 59 REMARK 465 ALA C 60 REMARK 465 VAL C 61 REMARK 465 SER C 62 REMARK 465 ALA C 63 REMARK 465 ASP C 64 REMARK 465 PRO C 65 REMARK 465 ASN C 66 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 88 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 86 52.41 -145.87 REMARK 500 LEU A 190 140.80 -174.38 REMARK 500 LEU B 190 137.83 175.87 REMARK 500 PRO C 161 -173.34 -68.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 156 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 909 DBREF 1RHO A 59 203 UNP P52565 GDIR_HUMAN 59 203 DBREF 1RHO B 59 203 UNP P52565 GDIR_HUMAN 59 203 DBREF 1RHO C 59 203 UNP P52565 GDIR_HUMAN 59 203 SEQADV 1RHO MSE A 126 UNP P52565 MET 126 MODIFIED RESIDUE SEQADV 1RHO GLU A 130 UNP P52565 GLN 130 CONFLICT SEQADV 1RHO MSE A 145 UNP P52565 MET 145 MODIFIED RESIDUE SEQADV 1RHO MSE A 169 UNP P52565 MET 169 MODIFIED RESIDUE SEQADV 1RHO MSE B 126 UNP P52565 MET 126 MODIFIED RESIDUE SEQADV 1RHO GLU B 130 UNP P52565 GLN 130 CONFLICT SEQADV 1RHO MSE B 145 UNP P52565 MET 145 MODIFIED RESIDUE SEQADV 1RHO MSE B 169 UNP P52565 MET 169 MODIFIED RESIDUE SEQADV 1RHO MSE C 126 UNP P52565 MET 126 MODIFIED RESIDUE SEQADV 1RHO GLU C 130 UNP P52565 GLN 130 CONFLICT SEQADV 1RHO MSE C 145 UNP P52565 MET 145 MODIFIED RESIDUE SEQADV 1RHO MSE C 169 UNP P52565 MET 169 MODIFIED RESIDUE SEQRES 1 A 145 VAL ALA VAL SER ALA ASP PRO ASN VAL PRO ASN VAL VAL SEQRES 2 A 145 VAL THR GLY LEU THR LEU VAL CYS SER SER ALA PRO GLY SEQRES 3 A 145 PRO LEU GLU LEU ASP LEU THR GLY ASP LEU GLU SER PHE SEQRES 4 A 145 LYS LYS GLN SER PHE VAL LEU LYS GLU GLY VAL GLU TYR SEQRES 5 A 145 ARG ILE LYS ILE SER PHE ARG VAL ASN ARG GLU ILE VAL SEQRES 6 A 145 SER GLY MSE LYS TYR ILE GLU HIS THR TYR ARG LYS GLY SEQRES 7 A 145 VAL LYS ILE ASP LYS THR ASP TYR MSE VAL GLY SER TYR SEQRES 8 A 145 GLY PRO ARG ALA GLU GLU TYR GLU PHE LEU THR PRO VAL SEQRES 9 A 145 GLU GLU ALA PRO LYS GLY MSE LEU ALA ARG GLY SER TYR SEQRES 10 A 145 SER ILE LYS SER ARG PHE THR ASP ASP ASP LYS THR ASP SEQRES 11 A 145 HIS LEU SER TRP GLU TRP ASN LEU THR ILE LYS LYS ASP SEQRES 12 A 145 TRP LYS SEQRES 1 B 145 VAL ALA VAL SER ALA ASP PRO ASN VAL PRO ASN VAL VAL SEQRES 2 B 145 VAL THR GLY LEU THR LEU VAL CYS SER SER ALA PRO GLY SEQRES 3 B 145 PRO LEU GLU LEU ASP LEU THR GLY ASP LEU GLU SER PHE SEQRES 4 B 145 LYS LYS GLN SER PHE VAL LEU LYS GLU GLY VAL GLU TYR SEQRES 5 B 145 ARG ILE LYS ILE SER PHE ARG VAL ASN ARG GLU ILE VAL SEQRES 6 B 145 SER GLY MSE LYS TYR ILE GLU HIS THR TYR ARG LYS GLY SEQRES 7 B 145 VAL LYS ILE ASP LYS THR ASP TYR MSE VAL GLY SER TYR SEQRES 8 B 145 GLY PRO ARG ALA GLU GLU TYR GLU PHE LEU THR PRO VAL SEQRES 9 B 145 GLU GLU ALA PRO LYS GLY MSE LEU ALA ARG GLY SER TYR SEQRES 10 B 145 SER ILE LYS SER ARG PHE THR ASP ASP ASP LYS THR ASP SEQRES 11 B 145 HIS LEU SER TRP GLU TRP ASN LEU THR ILE LYS LYS ASP SEQRES 12 B 145 TRP LYS SEQRES 1 C 145 VAL ALA VAL SER ALA ASP PRO ASN VAL PRO ASN VAL VAL SEQRES 2 C 145 VAL THR GLY LEU THR LEU VAL CYS SER SER ALA PRO GLY SEQRES 3 C 145 PRO LEU GLU LEU ASP LEU THR GLY ASP LEU GLU SER PHE SEQRES 4 C 145 LYS LYS GLN SER PHE VAL LEU LYS GLU GLY VAL GLU TYR SEQRES 5 C 145 ARG ILE LYS ILE SER PHE ARG VAL ASN ARG GLU ILE VAL SEQRES 6 C 145 SER GLY MSE LYS TYR ILE GLU HIS THR TYR ARG LYS GLY SEQRES 7 C 145 VAL LYS ILE ASP LYS THR ASP TYR MSE VAL GLY SER TYR SEQRES 8 C 145 GLY PRO ARG ALA GLU GLU TYR GLU PHE LEU THR PRO VAL SEQRES 9 C 145 GLU GLU ALA PRO LYS GLY MSE LEU ALA ARG GLY SER TYR SEQRES 10 C 145 SER ILE LYS SER ARG PHE THR ASP ASP ASP LYS THR ASP SEQRES 11 C 145 HIS LEU SER TRP GLU TRP ASN LEU THR ILE LYS LYS ASP SEQRES 12 C 145 TRP LYS MODRES 1RHO MSE A 126 MET SELENOMETHIONINE MODRES 1RHO MSE A 145 MET SELENOMETHIONINE MODRES 1RHO MSE A 169 MET SELENOMETHIONINE MODRES 1RHO MSE B 126 MET SELENOMETHIONINE MODRES 1RHO MSE B 145 MET SELENOMETHIONINE MODRES 1RHO MSE B 169 MET SELENOMETHIONINE MODRES 1RHO MSE C 126 MET SELENOMETHIONINE MODRES 1RHO MSE C 145 MET SELENOMETHIONINE MODRES 1RHO MSE C 169 MET SELENOMETHIONINE HET MSE A 126 8 HET MSE A 145 8 HET MSE A 169 8 HET MSE B 126 8 HET MSE B 145 8 HET MSE B 169 8 HET MSE C 126 8 HET MSE C 145 8 HET MSE C 169 8 HET SO4 A 902 5 HET SO4 A 904 5 HET SO4 A 907 5 HET SO4 B 903 5 HET SO4 B 906 5 HET SO4 B 909 5 HET SO4 C 901 5 HET SO4 C 905 5 HET SO4 C 908 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 4 SO4 9(O4 S 2-) FORMUL 13 HOH *191(H2 O) HELIX 1 1 GLU A 95 LYS A 98 5 4 HELIX 2 2 SER B 96 LYS B 99 5 4 HELIX 3 3 SER C 96 LYS C 99 5 4 SHEET 1 A 4 GLU A 87 ASP A 89 0 SHEET 2 A 4 VAL A 70 VAL A 78 -1 N LEU A 75 O LEU A 88 SHEET 3 A 4 ARG A 111 VAL A 118 -1 N ARG A 117 O VAL A 71 SHEET 4 A 4 TYR A 156 LEU A 159 -1 N PHE A 158 O ILE A 114 SHEET 1 B 5 PHE A 102 LYS A 105 0 SHEET 2 B 5 LEU A 190 LYS A 199 1 N THR A 197 O PHE A 102 SHEET 3 B 5 GLY A 173 ASP A 183 -1 N PHE A 181 O LEU A 190 SHEET 4 B 5 GLY A 125 ARG A 134 -1 N TYR A 133 O SER A 176 SHEET 5 B 5 VAL A 137 TYR A 144 -1 N TYR A 144 O TYR A 128 SHEET 1 C 4 GLU B 87 ASP B 89 0 SHEET 2 C 4 VAL B 70 VAL B 78 -1 N LEU B 75 O LEU B 88 SHEET 3 C 4 ARG B 111 VAL B 118 -1 N ARG B 117 O VAL B 71 SHEET 4 C 4 TYR B 156 LEU B 159 -1 N PHE B 158 O ILE B 114 SHEET 1 D 5 PHE B 102 LYS B 105 0 SHEET 2 D 5 LEU B 190 LYS B 199 1 N THR B 197 O PHE B 102 SHEET 3 D 5 GLY B 173 ASP B 183 -1 N PHE B 181 O LEU B 190 SHEET 4 D 5 GLY B 125 ARG B 134 -1 N TYR B 133 O SER B 176 SHEET 5 D 5 VAL B 137 TYR B 144 -1 N TYR B 144 O TYR B 128 SHEET 1 E 4 GLU C 87 ASP C 89 0 SHEET 2 E 4 VAL C 70 VAL C 78 -1 N LEU C 75 O LEU C 88 SHEET 3 E 4 ARG C 111 VAL C 118 -1 N ARG C 117 O VAL C 71 SHEET 4 E 4 TYR C 156 LEU C 159 -1 N PHE C 158 O ILE C 114 SHEET 1 F 5 PHE C 102 LYS C 105 0 SHEET 2 F 5 LEU C 190 LYS C 199 1 N THR C 197 O PHE C 102 SHEET 3 F 5 GLY C 173 ASP C 183 -1 N PHE C 181 O LEU C 190 SHEET 4 F 5 GLY C 125 ARG C 134 -1 N TYR C 133 O SER C 176 SHEET 5 F 5 VAL C 137 TYR C 144 -1 N TYR C 144 O TYR C 128 LINK N MSE A 126 C GLY A 125 1555 1555 1.32 LINK C MSE A 126 N LYS A 127 1555 1555 1.33 LINK N MSE A 145 C TYR A 144 1555 1555 1.33 LINK C MSE A 145 N VAL A 146 1555 1555 1.34 LINK N MSE A 169 C GLY A 168 1555 1555 1.33 LINK C MSE A 169 N LEU A 170 1555 1555 1.32 LINK N MSE B 126 C GLY B 125 1555 1555 1.32 LINK C MSE B 126 N LYS B 127 1555 1555 1.34 LINK N MSE B 145 C TYR B 144 1555 1555 1.32 LINK C MSE B 145 N VAL B 146 1555 1555 1.32 LINK N MSE B 169 C GLY B 168 1555 1555 1.33 LINK C MSE B 169 N LEU B 170 1555 1555 1.33 LINK N MSE C 126 C GLY C 125 1555 1555 1.33 LINK C MSE C 126 N LYS C 127 1555 1555 1.33 LINK N MSE C 145 C TYR C 144 1555 1555 1.33 LINK C MSE C 145 N VAL C 146 1555 1555 1.33 LINK N MSE C 169 C GLY C 168 1555 1555 1.34 LINK C MSE C 169 N LEU C 170 1555 1555 1.33 SITE 1 AC1 3 ARG C 111 PRO C 161 HOH C 639 SITE 1 AC2 2 ARG A 111 PRO C 83 SITE 1 AC3 2 ARG B 111 HOH B 569 SITE 1 AC4 3 GLY A 168 MSE A 169 ARG A 172 SITE 1 AC5 3 MSE C 169 ARG C 172 LYS C 200 SITE 1 AC6 2 MSE B 169 ARG B 172 SITE 1 AC7 5 ARG A 134 LYS A 135 GLY A 173 SER A 174 SITE 2 AC7 5 HOH A 675 SITE 1 AC8 3 LYS C 135 GLY C 173 SER C 174 SITE 1 AC9 4 ARG B 134 LYS B 135 GLY B 173 SER B 174 CRYST1 156.570 156.570 132.590 90.00 90.00 120.00 H 3 2 54 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006387 0.003687 0.000000 0.00000 SCALE2 0.000000 0.007375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007542 0.00000