HEADER PROTEIN BINDING 18-NOV-03 1RJ4 TITLE STRUCTURE OF A CELL WALL INVERTASE INHIBITOR FROM TOBACCO IN COMPLEX TITLE 2 WITH CD2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: INVERTASE INHIBITOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 TISSUE: CELL WALL; SOURCE 6 GENE: NTINH1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ORIGAMI(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PETM20 KEYWDS FOUR-HELIX BUNDLE, HELICAL HAIRPIN, CADMIUM COORDINATION, BIS-TRIS KEYWDS 2 BUFFER, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.HOTHORN,I.D'ANGELO,J.A.MARQUEZ,S.GREINER,K.SCHEFFZEK REVDAT 3 23-OCT-24 1RJ4 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1RJ4 1 VERSN REVDAT 1 03-FEB-04 1RJ4 0 JRNL AUTH M.HOTHORN,I.D'ANGELO,J.A.MARQUEZ,S.GREINER,K.SCHEFFZEK JRNL TITL THE INVERTASE INHIBITOR NT-CIF FROM TOBACCO: A HIGHLY JRNL TITL 2 THERMOSTABLE FOUR-HELIX BUNDLE WITH AN UNUSUAL N-TERMINAL JRNL TITL 3 EXTENSION JRNL REF J.MOL.BIOL. V. 335 987 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 14698293 JRNL DOI 10.1016/J.JMB.2003.10.066 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2195351.760 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 49095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2455 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7675 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 404 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4392 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86000 REMARK 3 B22 (A**2) : -6.18000 REMARK 3 B33 (A**2) : 7.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.160 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 49.18 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49162 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 1.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.0M SODIUM FORMATE, 0.1M BIS-TRIS REMARK 280 BUFFER, 0.03 M CDCL2, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.58500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.09550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.81950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.09550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.58500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.81950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 ASN B 1 REMARK 465 GLY C -3 REMARK 465 ALA C -2 REMARK 465 MET C -1 REMARK 465 GLY C 0 REMARK 465 ASN C 1 REMARK 465 GLY D -3 REMARK 465 ALA D -2 REMARK 465 MET D -1 REMARK 465 GLY D 0 REMARK 465 ASN D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 208 O HOH D 223 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 40.70 -92.70 REMARK 500 ASN A 13 80.18 -150.35 REMARK 500 ALA A 83 -67.69 -129.30 REMARK 500 ASN B 10 42.02 -104.27 REMARK 500 ASN B 13 79.81 -153.62 REMARK 500 SER B 60 27.09 -57.38 REMARK 500 ASN B 61 82.85 45.57 REMARK 500 ALA B 83 -59.49 -131.22 REMARK 500 LYS B 94 -58.02 -124.86 REMARK 500 ASN C 10 44.88 -97.90 REMARK 500 ASN C 13 77.10 -150.75 REMARK 500 ASN C 61 71.59 51.40 REMARK 500 ALA C 83 -61.99 -135.26 REMARK 500 LYS C 119 -72.44 -46.90 REMARK 500 SER C 121 168.39 60.25 REMARK 500 ASN D 10 33.56 -97.26 REMARK 500 ASN D 13 81.61 -151.57 REMARK 500 ALA D 83 -57.99 -131.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 148 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 113 OE1 REMARK 620 2 GLU A 113 OE2 54.9 REMARK 620 3 BTB A 156 O3 133.4 109.5 REMARK 620 4 BTB A 156 N 140.2 152.9 75.6 REMARK 620 5 BTB A 156 O6 127.0 79.4 83.0 74.9 REMARK 620 6 BTB A 156 O4 75.4 125.0 86.9 81.1 155.6 REMARK 620 7 BTB A 156 O8 81.0 102.8 142.6 67.1 84.9 89.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 152 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 133 NE2 REMARK 620 2 ASP A 137 OD1 88.6 REMARK 620 3 ASP A 137 OD2 93.5 53.5 REMARK 620 4 HOH A 334 O 97.6 94.7 146.1 REMARK 620 5 HOH B 333 O 97.7 159.3 106.3 103.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 150 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 113 OE1 REMARK 620 2 GLU B 113 OE2 56.2 REMARK 620 3 BTB B 157 O8 91.7 109.2 REMARK 620 4 BTB B 157 O4 76.6 130.4 84.6 REMARK 620 5 BTB B 157 N 145.6 157.1 71.1 72.4 REMARK 620 6 BTB B 157 O3 113.4 102.8 146.9 81.0 76.2 REMARK 620 7 BTB B 157 O6 133.4 80.7 86.3 148.9 76.5 90.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 151 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 133 NE2 REMARK 620 2 ASP B 137 OD1 91.2 REMARK 620 3 ASP B 137 OD2 93.6 52.3 REMARK 620 4 HOH B 190 O 99.6 72.6 123.5 REMARK 620 5 HOH B 280 O 67.2 122.7 160.6 61.0 REMARK 620 6 HOH B 321 O 99.2 160.2 109.8 121.5 77.1 REMARK 620 7 HOH B 384 O 167.6 85.2 74.8 90.6 124.5 81.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C 153 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 113 OE2 REMARK 620 2 GLU C 113 OE1 54.3 REMARK 620 3 BTB C 158 O3 129.5 106.2 REMARK 620 4 BTB C 158 O4 76.7 121.6 79.9 REMARK 620 5 BTB C 158 O8 84.7 106.7 142.7 97.3 REMARK 620 6 BTB C 158 N 143.8 159.8 69.8 77.9 73.3 REMARK 620 7 BTB C 158 O6 134.3 87.5 80.7 148.6 83.7 72.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C 155 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 133 NE2 REMARK 620 2 ASP C 137 OD2 72.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D 149 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 113 OE1 REMARK 620 2 GLU D 113 OE2 55.9 REMARK 620 3 BTB D 159 O6 134.2 82.8 REMARK 620 4 BTB D 159 O8 90.8 110.8 85.9 REMARK 620 5 BTB D 159 O4 78.6 130.0 146.5 87.4 REMARK 620 6 BTB D 159 O3 110.6 96.8 91.5 151.8 79.3 REMARK 620 7 BTB D 159 N 146.1 157.7 75.5 73.3 71.1 78.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D 154 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 133 NE2 REMARK 620 2 ASP D 137 OD2 80.1 REMARK 620 3 HOH D 294 O 102.3 162.6 REMARK 620 4 HOH D 313 O 88.5 83.1 114.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD C 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD C 155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 156 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB B 157 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB C 158 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB D 159 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RJ1 RELATED DB: PDB REMARK 900 CRYSTALS GROWN IN THE ABSENCE OF CDCL2 DBREF 1RJ4 A 1 147 UNP O49908 O49908_TOBAC 20 166 DBREF 1RJ4 B 1 147 UNP O49908 O49908_TOBAC 20 166 DBREF 1RJ4 C 1 147 UNP O49908 O49908_TOBAC 20 166 DBREF 1RJ4 D 1 147 UNP O49908 O49908_TOBAC 20 166 SEQADV 1RJ4 GLY A -3 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 ALA A -2 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 MET A -1 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY A 0 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY B -3 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 ALA B -2 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 MET B -1 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY B 0 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY C -3 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 ALA C -2 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 MET C -1 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY C 0 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY D -3 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 ALA D -2 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 MET D -1 UNP O49908 CLONING ARTIFACT SEQADV 1RJ4 GLY D 0 UNP O49908 CLONING ARTIFACT SEQRES 1 A 151 GLY ALA MET GLY ASN ASN LEU VAL GLU THR THR CYS LYS SEQRES 2 A 151 ASN THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SEQRES 3 A 151 SER ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU SEQRES 4 A 151 ALA LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN SEQRES 5 A 151 GLN ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN SEQRES 6 A 151 PRO PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA SEQRES 7 A 151 PHE SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU SEQRES 8 A 151 ALA ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA SEQRES 9 A 151 GLU ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU SEQRES 10 A 151 CYS GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER SEQRES 11 A 151 ALA LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY SEQRES 12 A 151 ARG ALA ILE VAL ARG ASN LEU LEU SEQRES 1 B 151 GLY ALA MET GLY ASN ASN LEU VAL GLU THR THR CYS LYS SEQRES 2 B 151 ASN THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SEQRES 3 B 151 SER ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU SEQRES 4 B 151 ALA LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN SEQRES 5 B 151 GLN ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN SEQRES 6 B 151 PRO PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA SEQRES 7 B 151 PHE SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU SEQRES 8 B 151 ALA ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA SEQRES 9 B 151 GLU ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU SEQRES 10 B 151 CYS GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER SEQRES 11 B 151 ALA LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY SEQRES 12 B 151 ARG ALA ILE VAL ARG ASN LEU LEU SEQRES 1 C 151 GLY ALA MET GLY ASN ASN LEU VAL GLU THR THR CYS LYS SEQRES 2 C 151 ASN THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SEQRES 3 C 151 SER ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU SEQRES 4 C 151 ALA LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN SEQRES 5 C 151 GLN ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN SEQRES 6 C 151 PRO PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA SEQRES 7 C 151 PHE SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU SEQRES 8 C 151 ALA ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA SEQRES 9 C 151 GLU ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU SEQRES 10 C 151 CYS GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER SEQRES 11 C 151 ALA LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY SEQRES 12 C 151 ARG ALA ILE VAL ARG ASN LEU LEU SEQRES 1 D 151 GLY ALA MET GLY ASN ASN LEU VAL GLU THR THR CYS LYS SEQRES 2 D 151 ASN THR PRO ASN TYR GLN LEU CYS LEU LYS THR LEU LEU SEQRES 3 D 151 SER ASP LYS ARG SER ALA THR GLY ASP ILE THR THR LEU SEQRES 4 D 151 ALA LEU ILE MET VAL ASP ALA ILE LYS ALA LYS ALA ASN SEQRES 5 D 151 GLN ALA ALA VAL THR ILE SER LYS LEU ARG HIS SER ASN SEQRES 6 D 151 PRO PRO ALA ALA TRP LYS GLY PRO LEU LYS ASN CYS ALA SEQRES 7 D 151 PHE SER TYR LYS VAL ILE LEU THR ALA SER LEU PRO GLU SEQRES 8 D 151 ALA ILE GLU ALA LEU THR LYS GLY ASP PRO LYS PHE ALA SEQRES 9 D 151 GLU ASP GLY MET VAL GLY SER SER GLY ASP ALA GLN GLU SEQRES 10 D 151 CYS GLU GLU TYR PHE LYS GLY SER LYS SER PRO PHE SER SEQRES 11 D 151 ALA LEU ASN ILE ALA VAL HIS GLU LEU SER ASP VAL GLY SEQRES 12 D 151 ARG ALA ILE VAL ARG ASN LEU LEU HET CD A 148 1 HET CD A 152 1 HET BTB A 156 14 HET CD B 150 1 HET CD B 151 1 HET BTB B 157 14 HET CD C 153 1 HET CD C 155 1 HET BTB C 158 14 HET CD D 149 1 HET CD D 154 1 HET BTB D 159 14 HETNAM CD CADMIUM ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 5 CD 8(CD 2+) FORMUL 7 BTB 4(C8 H19 N O5) FORMUL 17 HOH *236(H2 O) HELIX 1 1 ASN A 2 ASN A 10 1 9 HELIX 2 2 ASN A 13 SER A 23 1 11 HELIX 3 3 ASP A 31 HIS A 59 1 29 HELIX 4 4 PRO A 63 ALA A 65 5 3 HELIX 5 5 TRP A 66 ALA A 83 1 18 HELIX 6 6 ALA A 83 GLY A 95 1 13 HELIX 7 7 PRO A 97 GLU A 116 1 20 HELIX 8 8 TYR A 117 LYS A 122 5 6 HELIX 9 9 PHE A 125 LEU A 147 1 23 HELIX 10 10 ASN B 2 ASN B 10 1 9 HELIX 11 11 ASN B 13 SER B 23 1 11 HELIX 12 12 ASP B 24 ALA B 28 5 5 HELIX 13 13 ASP B 31 SER B 60 1 30 HELIX 14 14 PRO B 63 ALA B 83 1 21 HELIX 15 15 ALA B 83 LYS B 94 1 12 HELIX 16 16 PRO B 97 PHE B 118 1 22 HELIX 17 17 PHE B 125 ARG B 144 1 20 HELIX 18 18 ASN B 145 LEU B 147 5 3 HELIX 19 19 ASN C 2 LYS C 9 1 8 HELIX 20 20 ASN C 13 LEU C 22 1 10 HELIX 21 21 ASP C 24 ALA C 28 5 5 HELIX 22 22 ASP C 31 HIS C 59 1 29 HELIX 23 23 TRP C 66 ALA C 83 1 18 HELIX 24 24 ALA C 83 GLY C 95 1 13 HELIX 25 25 ASP C 96 PHE C 118 1 23 HELIX 26 26 PHE C 125 ARG C 144 1 20 HELIX 27 27 ASN C 145 LEU C 147 5 3 HELIX 28 28 ASN D 2 ASN D 10 1 9 HELIX 29 29 ASN D 13 SER D 23 1 11 HELIX 30 30 ASP D 24 ALA D 28 5 5 HELIX 31 31 ASP D 31 HIS D 59 1 29 HELIX 32 32 PRO D 63 ALA D 65 5 3 HELIX 33 33 TRP D 66 ALA D 83 1 18 HELIX 34 34 ALA D 83 LYS D 94 1 12 HELIX 35 35 ASP D 96 LYS D 98 5 3 HELIX 36 36 PHE D 99 PHE D 118 1 20 HELIX 37 37 PHE D 125 ASN D 145 1 21 SSBOND 1 CYS A 8 CYS A 17 1555 1555 2.11 SSBOND 2 CYS A 73 CYS A 114 1555 1555 2.08 SSBOND 3 CYS B 8 CYS B 17 1555 1555 2.11 SSBOND 4 CYS B 73 CYS B 114 1555 1555 2.05 SSBOND 5 CYS C 8 CYS C 17 1555 1555 2.07 SSBOND 6 CYS C 73 CYS C 114 1555 1555 2.02 SSBOND 7 CYS D 8 CYS D 17 1555 1555 2.08 SSBOND 8 CYS D 73 CYS D 114 1555 1555 2.07 LINK OE1 GLU A 113 CD CD A 148 1555 1555 2.43 LINK OE2 GLU A 113 CD CD A 148 1555 1555 2.41 LINK NE2 HIS A 133 CD CD A 152 1555 1555 2.40 LINK OD1 ASP A 137 CD CD A 152 1555 1555 2.59 LINK OD2 ASP A 137 CD CD A 152 1555 1555 2.22 LINK CD CD A 148 O3 BTB A 156 1555 1555 2.28 LINK CD CD A 148 N BTB A 156 1555 1555 2.35 LINK CD CD A 148 O6 BTB A 156 1555 1555 2.07 LINK CD CD A 148 O4 BTB A 156 1555 1555 2.34 LINK CD CD A 148 O8 BTB A 156 1555 1555 2.17 LINK CD CD A 152 O HOH A 334 1555 1555 2.54 LINK CD CD A 152 O HOH B 333 1555 1555 2.40 LINK OE1 GLU B 113 CD CD B 150 1555 1555 2.33 LINK OE2 GLU B 113 CD CD B 150 1555 1555 2.31 LINK NE2 HIS B 133 CD CD B 151 1555 1555 2.41 LINK OD1 ASP B 137 CD CD B 151 1555 1555 2.66 LINK OD2 ASP B 137 CD CD B 151 1555 1555 2.28 LINK CD CD B 150 O8 BTB B 157 1555 1555 2.30 LINK CD CD B 150 O4 BTB B 157 1555 1555 2.39 LINK CD CD B 150 N BTB B 157 1555 1555 2.33 LINK CD CD B 150 O3 BTB B 157 1555 1555 2.05 LINK CD CD B 150 O6 BTB B 157 1555 1555 2.08 LINK CD CD B 151 O HOH B 190 1555 1555 2.16 LINK CD CD B 151 O HOH B 280 1555 1555 2.40 LINK CD CD B 151 O HOH B 321 1555 1555 2.34 LINK CD CD B 151 O HOH B 384 1555 1555 2.61 LINK OE2 GLU C 113 CD CD C 153 1555 1555 2.33 LINK OE1 GLU C 113 CD CD C 153 1555 1555 2.50 LINK NE2 HIS C 133 CD CD C 155 1555 1555 2.52 LINK OD2 ASP C 137 CD CD C 155 1555 1555 2.34 LINK CD CD C 153 O3 BTB C 158 1555 1555 2.56 LINK CD CD C 153 O4 BTB C 158 1555 1555 2.50 LINK CD CD C 153 O8 BTB C 158 1555 1555 2.03 LINK CD CD C 153 N BTB C 158 1555 1555 2.34 LINK CD CD C 153 O6 BTB C 158 1555 1555 2.34 LINK OE1 GLU D 113 CD CD D 149 1555 1555 2.37 LINK OE2 GLU D 113 CD CD D 149 1555 1555 2.37 LINK NE2 HIS D 133 CD CD D 154 1555 1555 2.39 LINK OD2 ASP D 137 CD CD D 154 1555 1555 2.42 LINK CD CD D 149 O6 BTB D 159 1555 1555 2.25 LINK CD CD D 149 O8 BTB D 159 1555 1555 2.13 LINK CD CD D 149 O4 BTB D 159 1555 1555 2.44 LINK CD CD D 149 O3 BTB D 159 1555 1555 2.08 LINK CD CD D 149 N BTB D 159 1555 1555 2.29 LINK CD CD D 154 O HOH D 294 1555 1555 2.97 LINK CD CD D 154 O HOH D 313 1555 1555 2.53 SITE 1 AC1 3 ASP A 110 GLU A 113 BTB A 156 SITE 1 AC2 2 GLU D 113 BTB D 159 SITE 1 AC3 2 GLU B 113 BTB B 157 SITE 1 AC4 6 HIS B 133 ASP B 137 HOH B 190 HOH B 280 SITE 2 AC4 6 HOH B 321 HOH B 384 SITE 1 AC5 4 HIS A 133 ASP A 137 HOH A 334 HOH B 333 SITE 1 AC6 2 GLU C 113 BTB C 158 SITE 1 AC7 4 HIS D 133 ASP D 137 HOH D 294 HOH D 313 SITE 1 AC8 2 HIS C 133 ASP C 137 SITE 1 AC9 11 ASP A 110 GLU A 113 TYR A 117 CD A 148 SITE 2 AC9 11 HOH A 161 HOH A 189 HOH A 319 SER C 84 SITE 3 AC9 11 GLU C 87 ASP C 110 BTB C 158 SITE 1 BC1 14 ASP B 110 GLU B 113 TYR B 117 CD B 150 SITE 2 BC1 14 HOH B 177 HOH B 287 HOH B 389 SER D 84 SITE 3 BC1 14 GLU D 87 ASP D 102 ASP D 110 BTB D 159 SITE 4 BC1 14 HOH D 165 HOH D 275 SITE 1 BC2 11 SER A 84 GLU A 87 ASP A 110 BTB A 156 SITE 2 BC2 11 HOH A 226 ASP C 110 GLU C 113 TYR C 117 SITE 3 BC2 11 CD C 153 HOH C 357 HOH C 380 SITE 1 BC3 12 SER B 84 GLU B 87 ASP B 110 BTB B 157 SITE 2 BC3 12 HOH B 160 HOH B 235 ASP D 110 GLU D 113 SITE 3 BC3 12 TYR D 117 CD D 149 HOH D 184 HOH D 267 CRYST1 59.170 95.639 126.191 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007924 0.00000