HEADER TRANSFERASE 19-NOV-03 1RJE TITLE STRUCTURE OF PPM1, A LEUCINE CARBOXY METHYLTRANSFERASE INVOLVED IN THE TITLE 2 REGULATION OF PROTEIN PHOSPHATASE 2A ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXY METHYL TRANSFERASE FOR PROTEIN PHOSPHATASE 2A COMPND 3 CATALYTIC SUBUNIT; COMPND 4 CHAIN: A, B, C; COMPND 5 SYNONYM: PPM1P; COMPND 6 EC: 2.1.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: PPM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: XL-10 GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9 KEYWDS SAM DEPENDENT METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.LEULLIOT,S.QUEVILLON-CHERUEL,I.SOREL,I.L.DE LA SIERRA-GALLAY, AUTHOR 2 B.COLLINET,M.GRAILLE,K.BLONDEAU,N.BETTACHE,A.POUPON,J.JANIN,H.VAN AUTHOR 3 TILBEURGH REVDAT 4 14-FEB-24 1RJE 1 REMARK SEQADV REVDAT 3 24-FEB-09 1RJE 1 VERSN REVDAT 2 21-DEC-04 1RJE 1 JRNL REVDAT 1 02-DEC-03 1RJE 0 JRNL AUTH N.LEULLIOT,S.QUEVILLON-CHERUEL,I.SOREL, JRNL AUTH 2 I.L.DE LA SIERRA-GALLAY,B.COLLINET,M.GRAILLE,K.BLONDEAU, JRNL AUTH 3 N.BETTACHE,A.POUPON,J.JANIN,H.VAN TILBEURGH JRNL TITL STRUCTURE OF PROTEIN PHOSPHATASE METHYLTRANSFERASE 1 (PPM1), JRNL TITL 2 A LEUCINE CARBOXYL METHYLTRANSFERASE INVOLVED IN THE JRNL TITL 3 REGULATION OF PROTEIN PHOSPHATASE 2A ACTIVITY. JRNL REF J.BIOL.CHEM. V. 279 8351 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14660564 JRNL DOI 10.1074/JBC.M311484200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 72598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3851 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4794 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 224 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7992 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.18000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.163 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.885 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8273 ; 0.005 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 7554 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11183 ; 0.790 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17632 ; 0.857 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 988 ; 4.369 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1255 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8928 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1623 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1909 ; 0.255 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 8876 ; 0.245 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 4736 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 805 ; 0.195 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 76 ; 0.342 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 45 ; 0.213 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4961 ; 0.843 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8028 ; 1.577 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3312 ; 2.516 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3136 ; 4.128 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1RJE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76511 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 24.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 8000, 0.2M AMMONIUM SULFATE, REMARK 280 0.1M MES, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.40867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.20433 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.80650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.60217 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 138.01083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 330 REMARK 465 HIS A 331 REMARK 465 HIS A 332 REMARK 465 HIS A 333 REMARK 465 HIS A 334 REMARK 465 MET B 1 REMARK 465 HIS B 331 REMARK 465 HIS B 332 REMARK 465 HIS B 333 REMARK 465 HIS B 334 REMARK 465 MET C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 201 CD GLU A 201 OE2 0.074 REMARK 500 GLU B 201 CD GLU B 201 OE2 0.075 REMARK 500 GLU C 201 CD GLU C 201 OE2 0.075 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 160 -106.77 65.24 REMARK 500 SER A 200 69.94 -117.48 REMARK 500 TYR A 265 73.25 -103.08 REMARK 500 TRP A 275 40.26 -102.47 REMARK 500 TYR B 129 153.72 -48.42 REMARK 500 SER B 160 -112.31 -44.22 REMARK 500 ASP B 165 63.06 -150.70 REMARK 500 LEU B 227 113.42 -162.38 REMARK 500 ASN B 240 -13.37 85.10 REMARK 500 TYR B 265 66.18 -103.75 REMARK 500 SER C 160 -133.07 43.72 REMARK 500 ASP C 165 77.33 -152.16 REMARK 500 LEU C 227 114.75 -161.34 REMARK 500 ASN C 240 -22.17 86.76 REMARK 500 TYR C 265 64.97 -100.64 REMARK 500 TRP C 275 41.23 -102.76 REMARK 500 HIS C 329 71.88 -157.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH C 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME C 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME C 1009 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RJD RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH S-ADENOSYLMETHIONINE REMARK 900 RELATED ID: 1RJF RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH GOL REMARK 900 RELATED ID: 1RJG RELATED DB: PDB REMARK 900 SAME PROTEIN, SPACEGROUP P 21 21 21 DBREF 1RJE A 1 328 UNP Q04081 Q04081_YEAST 1 328 DBREF 1RJE B 1 328 UNP Q04081 Q04081_YEAST 1 328 DBREF 1RJE C 1 328 UNP Q04081 Q04081_YEAST 1 328 SEQADV 1RJE HIS A 329 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS A 330 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS A 331 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS A 332 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS A 333 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS A 334 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 329 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 330 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 331 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 332 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 333 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS B 334 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 329 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 330 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 331 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 332 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 333 UNP Q04081 EXPRESSION TAG SEQADV 1RJE HIS C 334 UNP Q04081 EXPRESSION TAG SEQRES 1 A 334 MET GLU ARG ILE ILE GLN GLN THR ASP TYR ASP ALA LEU SEQRES 2 A 334 SER CYS LYS LEU ALA ALA ILE SER VAL GLY TYR LEU PRO SEQRES 3 A 334 SER SER GLY LEU GLN ARG LEU SER VAL ASP LEU SER LYS SEQRES 4 A 334 LYS TYR THR GLU TRP HIS ARG SER TYR LEU ILE THR LEU SEQRES 5 A 334 LYS LYS PHE SER ARG ARG ALA PHE GLY LYS VAL ASP LYS SEQRES 6 A 334 ALA MET ARG SER SER PHE PRO VAL MET ASN TYR GLY THR SEQRES 7 A 334 TYR LEU ARG THR VAL GLY ILE ASP ALA ALA ILE LEU GLU SEQRES 8 A 334 PHE LEU VAL ALA ASN GLU LYS VAL GLN VAL VAL ASN LEU SEQRES 9 A 334 GLY CYS GLY SER ASP LEU ARG MET LEU PRO LEU LEU GLN SEQRES 10 A 334 MET PHE PRO HIS LEU ALA TYR VAL ASP ILE ASP TYR ASN SEQRES 11 A 334 GLU SER VAL GLU LEU LYS ASN SER ILE LEU ARG GLU SER SEQRES 12 A 334 GLU ILE LEU ARG ILE SER LEU GLY LEU SER LYS GLU ASP SEQRES 13 A 334 THR ALA LYS SER PRO PHE LEU ILE ASP GLN GLY ARG TYR SEQRES 14 A 334 LYS LEU ALA ALA CYS ASP LEU ASN ASP ILE THR GLU THR SEQRES 15 A 334 THR ARG LEU LEU ASP VAL CYS THR LYS ARG GLU ILE PRO SEQRES 16 A 334 THR ILE VAL ILE SER GLU CYS LEU LEU CYS TYR MET HIS SEQRES 17 A 334 ASN ASN GLU SER GLN LEU LEU ILE ASN THR ILE MET SER SEQRES 18 A 334 LYS PHE SER HIS GLY LEU TRP ILE SER TYR ASP PRO ILE SEQRES 19 A 334 GLY GLY SER GLN PRO ASN ASP ARG PHE GLY ALA ILE MET SEQRES 20 A 334 GLN SER ASN LEU LYS GLU SER ARG ASN LEU GLU MET PRO SEQRES 21 A 334 THR LEU MET THR TYR ASN SER LYS GLU LYS TYR ALA SER SEQRES 22 A 334 ARG TRP SER ALA ALA PRO ASN VAL ILE VAL ASN ASP MET SEQRES 23 A 334 TRP GLU ILE PHE ASN ALA GLN ILE PRO GLU SER GLU ARG SEQRES 24 A 334 LYS ARG LEU ARG SER LEU GLN PHE LEU ASP GLU LEU GLU SEQRES 25 A 334 GLU LEU LYS VAL MET GLN THR HIS TYR ILE LEU MET LYS SEQRES 26 A 334 ALA GLN TRP HIS HIS HIS HIS HIS HIS SEQRES 1 B 334 MET GLU ARG ILE ILE GLN GLN THR ASP TYR ASP ALA LEU SEQRES 2 B 334 SER CYS LYS LEU ALA ALA ILE SER VAL GLY TYR LEU PRO SEQRES 3 B 334 SER SER GLY LEU GLN ARG LEU SER VAL ASP LEU SER LYS SEQRES 4 B 334 LYS TYR THR GLU TRP HIS ARG SER TYR LEU ILE THR LEU SEQRES 5 B 334 LYS LYS PHE SER ARG ARG ALA PHE GLY LYS VAL ASP LYS SEQRES 6 B 334 ALA MET ARG SER SER PHE PRO VAL MET ASN TYR GLY THR SEQRES 7 B 334 TYR LEU ARG THR VAL GLY ILE ASP ALA ALA ILE LEU GLU SEQRES 8 B 334 PHE LEU VAL ALA ASN GLU LYS VAL GLN VAL VAL ASN LEU SEQRES 9 B 334 GLY CYS GLY SER ASP LEU ARG MET LEU PRO LEU LEU GLN SEQRES 10 B 334 MET PHE PRO HIS LEU ALA TYR VAL ASP ILE ASP TYR ASN SEQRES 11 B 334 GLU SER VAL GLU LEU LYS ASN SER ILE LEU ARG GLU SER SEQRES 12 B 334 GLU ILE LEU ARG ILE SER LEU GLY LEU SER LYS GLU ASP SEQRES 13 B 334 THR ALA LYS SER PRO PHE LEU ILE ASP GLN GLY ARG TYR SEQRES 14 B 334 LYS LEU ALA ALA CYS ASP LEU ASN ASP ILE THR GLU THR SEQRES 15 B 334 THR ARG LEU LEU ASP VAL CYS THR LYS ARG GLU ILE PRO SEQRES 16 B 334 THR ILE VAL ILE SER GLU CYS LEU LEU CYS TYR MET HIS SEQRES 17 B 334 ASN ASN GLU SER GLN LEU LEU ILE ASN THR ILE MET SER SEQRES 18 B 334 LYS PHE SER HIS GLY LEU TRP ILE SER TYR ASP PRO ILE SEQRES 19 B 334 GLY GLY SER GLN PRO ASN ASP ARG PHE GLY ALA ILE MET SEQRES 20 B 334 GLN SER ASN LEU LYS GLU SER ARG ASN LEU GLU MET PRO SEQRES 21 B 334 THR LEU MET THR TYR ASN SER LYS GLU LYS TYR ALA SER SEQRES 22 B 334 ARG TRP SER ALA ALA PRO ASN VAL ILE VAL ASN ASP MET SEQRES 23 B 334 TRP GLU ILE PHE ASN ALA GLN ILE PRO GLU SER GLU ARG SEQRES 24 B 334 LYS ARG LEU ARG SER LEU GLN PHE LEU ASP GLU LEU GLU SEQRES 25 B 334 GLU LEU LYS VAL MET GLN THR HIS TYR ILE LEU MET LYS SEQRES 26 B 334 ALA GLN TRP HIS HIS HIS HIS HIS HIS SEQRES 1 C 334 MET GLU ARG ILE ILE GLN GLN THR ASP TYR ASP ALA LEU SEQRES 2 C 334 SER CYS LYS LEU ALA ALA ILE SER VAL GLY TYR LEU PRO SEQRES 3 C 334 SER SER GLY LEU GLN ARG LEU SER VAL ASP LEU SER LYS SEQRES 4 C 334 LYS TYR THR GLU TRP HIS ARG SER TYR LEU ILE THR LEU SEQRES 5 C 334 LYS LYS PHE SER ARG ARG ALA PHE GLY LYS VAL ASP LYS SEQRES 6 C 334 ALA MET ARG SER SER PHE PRO VAL MET ASN TYR GLY THR SEQRES 7 C 334 TYR LEU ARG THR VAL GLY ILE ASP ALA ALA ILE LEU GLU SEQRES 8 C 334 PHE LEU VAL ALA ASN GLU LYS VAL GLN VAL VAL ASN LEU SEQRES 9 C 334 GLY CYS GLY SER ASP LEU ARG MET LEU PRO LEU LEU GLN SEQRES 10 C 334 MET PHE PRO HIS LEU ALA TYR VAL ASP ILE ASP TYR ASN SEQRES 11 C 334 GLU SER VAL GLU LEU LYS ASN SER ILE LEU ARG GLU SER SEQRES 12 C 334 GLU ILE LEU ARG ILE SER LEU GLY LEU SER LYS GLU ASP SEQRES 13 C 334 THR ALA LYS SER PRO PHE LEU ILE ASP GLN GLY ARG TYR SEQRES 14 C 334 LYS LEU ALA ALA CYS ASP LEU ASN ASP ILE THR GLU THR SEQRES 15 C 334 THR ARG LEU LEU ASP VAL CYS THR LYS ARG GLU ILE PRO SEQRES 16 C 334 THR ILE VAL ILE SER GLU CYS LEU LEU CYS TYR MET HIS SEQRES 17 C 334 ASN ASN GLU SER GLN LEU LEU ILE ASN THR ILE MET SER SEQRES 18 C 334 LYS PHE SER HIS GLY LEU TRP ILE SER TYR ASP PRO ILE SEQRES 19 C 334 GLY GLY SER GLN PRO ASN ASP ARG PHE GLY ALA ILE MET SEQRES 20 C 334 GLN SER ASN LEU LYS GLU SER ARG ASN LEU GLU MET PRO SEQRES 21 C 334 THR LEU MET THR TYR ASN SER LYS GLU LYS TYR ALA SER SEQRES 22 C 334 ARG TRP SER ALA ALA PRO ASN VAL ILE VAL ASN ASP MET SEQRES 23 C 334 TRP GLU ILE PHE ASN ALA GLN ILE PRO GLU SER GLU ARG SEQRES 24 C 334 LYS ARG LEU ARG SER LEU GLN PHE LEU ASP GLU LEU GLU SEQRES 25 C 334 GLU LEU LYS VAL MET GLN THR HIS TYR ILE LEU MET LYS SEQRES 26 C 334 ALA GLN TRP HIS HIS HIS HIS HIS HIS HET SO4 A1001 5 HET SAH A2001 26 HET BME A1004 4 HET BME A1007 4 HET SO4 B1002 5 HET SAH B2002 26 HET BME B1005 4 HET BME B1008 4 HET SAH C2003 26 HET BME C1006 4 HET BME C1009 4 HETNAM SO4 SULFATE ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM BME BETA-MERCAPTOETHANOL FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 SAH 3(C14 H20 N6 O5 S) FORMUL 6 BME 6(C2 H6 O S) FORMUL 15 HOH *990(H2 O) HELIX 1 1 GLU A 2 GLN A 7 1 6 HELIX 2 2 THR A 8 GLY A 23 1 16 HELIX 3 3 SER A 34 SER A 56 1 23 HELIX 4 4 SER A 56 SER A 69 1 14 HELIX 5 5 PHE A 71 ASN A 96 1 26 HELIX 6 6 ARG A 111 PHE A 119 1 9 HELIX 7 7 TYR A 129 SER A 143 1 15 HELIX 8 8 SER A 143 GLY A 151 1 9 HELIX 9 9 ASP A 178 THR A 190 1 13 HELIX 10 10 HIS A 208 PHE A 223 1 16 HELIX 11 11 ARG A 242 ARG A 255 1 14 HELIX 12 12 SER A 267 SER A 273 1 7 HELIX 13 13 ARG A 274 SER A 276 5 3 HELIX 14 14 MET A 286 GLN A 293 1 8 HELIX 15 15 PRO A 295 GLN A 306 1 12 HELIX 16 16 GLU A 310 THR A 319 1 10 HELIX 17 17 GLU B 2 GLN B 7 1 6 HELIX 18 18 THR B 8 VAL B 22 1 15 HELIX 19 19 SER B 34 SER B 56 1 23 HELIX 20 20 SER B 56 SER B 69 1 14 HELIX 21 21 PHE B 71 ASN B 96 1 26 HELIX 22 22 ARG B 111 PHE B 119 1 9 HELIX 23 23 TYR B 129 SER B 143 1 15 HELIX 24 24 SER B 143 GLY B 151 1 9 HELIX 25 25 ASP B 178 THR B 190 1 13 HELIX 26 26 HIS B 208 PHE B 223 1 16 HELIX 27 27 ARG B 242 ARG B 255 1 14 HELIX 28 28 SER B 267 SER B 273 1 7 HELIX 29 29 ARG B 274 SER B 276 5 3 HELIX 30 30 MET B 286 GLN B 293 1 8 HELIX 31 31 PRO B 295 GLN B 306 1 12 HELIX 32 32 GLU B 310 THR B 319 1 10 HELIX 33 33 GLU C 2 GLN C 7 1 6 HELIX 34 34 THR C 8 GLY C 23 1 16 HELIX 35 35 SER C 34 SER C 56 1 23 HELIX 36 36 SER C 56 SER C 69 1 14 HELIX 37 37 PHE C 71 ASN C 96 1 26 HELIX 38 38 ARG C 111 PHE C 119 1 9 HELIX 39 39 TYR C 129 SER C 143 1 15 HELIX 40 40 SER C 143 GLY C 151 1 9 HELIX 41 41 ASP C 178 THR C 190 1 13 HELIX 42 42 HIS C 208 PHE C 223 1 16 HELIX 43 43 ARG C 242 ARG C 255 1 14 HELIX 44 44 SER C 267 SER C 273 1 7 HELIX 45 45 ARG C 274 SER C 276 5 3 HELIX 46 46 MET C 286 ALA C 292 1 7 HELIX 47 47 PRO C 295 GLN C 306 1 12 HELIX 48 48 GLU C 310 THR C 319 1 10 SHEET 1 A 8 PHE A 162 GLN A 166 0 SHEET 2 A 8 TYR A 169 ALA A 173 -1 O LEU A 171 N ILE A 164 SHEET 3 A 8 LEU A 122 ASP A 128 1 N ASP A 126 O LYS A 170 SHEET 4 A 8 VAL A 99 LEU A 104 1 N VAL A 99 O ALA A 123 SHEET 5 A 8 THR A 196 GLU A 201 1 O ILE A 197 N VAL A 102 SHEET 6 A 8 GLY A 226 PRO A 233 1 O ILE A 229 N VAL A 198 SHEET 7 A 8 TYR A 321 TRP A 328 -1 O MET A 324 N SER A 230 SHEET 8 A 8 ASN A 280 ASP A 285 -1 N ASN A 280 O GLN A 327 SHEET 1 B 8 PHE B 162 GLN B 166 0 SHEET 2 B 8 TYR B 169 ALA B 173 -1 O LEU B 171 N ILE B 164 SHEET 3 B 8 LEU B 122 ASP B 128 1 N ASP B 126 O ALA B 172 SHEET 4 B 8 VAL B 99 LEU B 104 1 N VAL B 99 O ALA B 123 SHEET 5 B 8 THR B 196 ILE B 199 1 O ILE B 197 N VAL B 102 SHEET 6 B 8 HIS B 225 PRO B 233 1 O LEU B 227 N THR B 196 SHEET 7 B 8 TYR B 321 HIS B 329 -1 O ILE B 322 N ASP B 232 SHEET 8 B 8 ASN B 280 ASP B 285 -1 N ASN B 280 O GLN B 327 SHEET 1 C 8 PHE C 162 GLN C 166 0 SHEET 2 C 8 TYR C 169 ALA C 173 -1 O LEU C 171 N ILE C 164 SHEET 3 C 8 LEU C 122 ASP C 128 1 N ASP C 126 O LYS C 170 SHEET 4 C 8 VAL C 99 LEU C 104 1 N VAL C 99 O ALA C 123 SHEET 5 C 8 THR C 196 GLU C 201 1 O ILE C 197 N VAL C 102 SHEET 6 C 8 HIS C 225 PRO C 233 1 O ILE C 229 N VAL C 198 SHEET 7 C 8 TYR C 321 HIS C 329 -1 O MET C 324 N SER C 230 SHEET 8 C 8 ASN C 280 ASP C 285 -1 N ILE C 282 O LYS C 325 CISPEP 1 LEU A 25 PRO A 26 0 -1.91 CISPEP 2 LEU B 25 PRO B 26 0 -2.12 CISPEP 3 LEU C 25 PRO C 26 0 -2.11 SITE 1 AC1 6 GLN A 166 GLY A 167 HOH A2117 HOH A2200 SITE 2 AC1 6 HIS C 330 HIS C 332 SITE 1 AC2 7 PHE B 71 PRO B 72 VAL B 73 LEU B 308 SITE 2 AC2 7 ASP B 309 GLU B 310 HOH B2081 SITE 1 AC3 24 ILE A 5 GLN A 6 THR A 8 ASP A 9 SITE 2 AC3 24 ALA A 12 ARG A 81 GLY A 105 CYS A 106 SITE 3 AC3 24 ASP A 128 TYR A 129 CYS A 174 ASP A 175 SITE 4 AC3 24 LEU A 176 ASN A 177 GLU A 201 CYS A 202 SITE 5 AC3 24 LEU A 203 HOH A2006 HOH A2010 HOH A2034 SITE 6 AC3 24 HOH A2059 HOH A2109 HOH A2205 HOH A2314 SITE 1 AC4 24 ILE B 5 THR B 8 ASP B 9 ALA B 12 SITE 2 AC4 24 ARG B 81 GLY B 105 CYS B 106 ASP B 128 SITE 3 AC4 24 TYR B 129 CYS B 174 ASP B 175 LEU B 176 SITE 4 AC4 24 ASN B 177 GLU B 201 CYS B 202 LEU B 203 SITE 5 AC4 24 HOH B2003 HOH B2005 HOH B2017 HOH B2040 SITE 6 AC4 24 HOH B2054 HOH B2069 HOH B2248 HOH B2251 SITE 1 AC5 22 ILE C 5 THR C 8 ASP C 9 ALA C 12 SITE 2 AC5 22 ARG C 81 GLY C 105 CYS C 106 ASP C 128 SITE 3 AC5 22 TYR C 129 CYS C 174 ASP C 175 LEU C 176 SITE 4 AC5 22 ASN C 177 GLU C 201 CYS C 202 LEU C 203 SITE 5 AC5 22 HOH C2018 HOH C2020 HOH C2038 HOH C2060 SITE 6 AC5 22 HOH C2102 HOH C2137 SITE 1 AC6 4 CYS A 202 PRO A 233 TYR A 321 HOH A2328 SITE 1 AC7 3 CYS B 202 PRO B 233 TYR B 321 SITE 1 AC8 4 CYS C 202 TYR C 206 MET C 259 HOH C2226 SITE 1 AC9 6 SER A 14 CYS A 15 ALA A 66 SER A 70 SITE 2 AC9 6 MET A 74 HOH A2154 SITE 1 BC1 7 SER B 14 CYS B 15 ALA B 66 SER B 70 SITE 2 BC1 7 MET B 74 HOH B2256 HOH B2265 SITE 1 BC2 5 ASP C 11 CYS C 15 ALA C 66 SER C 70 SITE 2 BC2 5 MET C 74 CRYST1 110.747 110.747 165.613 90.00 90.00 120.00 P 65 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009030 0.005213 0.000000 0.00000 SCALE2 0.000000 0.010426 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006038 0.00000