data_1RJH # _entry.id 1RJH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RJH pdb_00001rjh 10.2210/pdb1rjh/pdb RCSB RCSB020803 ? ? WWPDB D_1000020803 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1tn3 'Xray structure of the C-Type Lectin-like Domain of human tetranectin (TN3) with two calcium ions bound.' unspecified PDB 1htn 'Xray structure of full length tetranectin (TN) with two calcium ions bound in the C-type Lectin-like domain.' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RJH _pdbx_database_status.recvd_initial_deposition_date 2003-11-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nielbo, S.' 1 'Thomsen, J.K.' 2 'Graversen, J.H.' 3 'Etzerodt, M.' 4 'Poulsen, F.M.' 5 'Thoegersen, H.C.' 6 # _citation.id primary _citation.title 'Structure of the Plasminogen Kringle 4 Binding Calcium-Free Form of the C-Type Lectin-Like Domain of Tetranectin.' _citation.journal_abbrev Biochemistry _citation.journal_volume 43 _citation.page_first 8636 _citation.page_last 8643 _citation.year 2004 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15236571 _citation.pdbx_database_id_DOI 10.1021/bi049570s # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nielbo, S.' 1 ? primary 'Thomsen, J.K.' 2 ? primary 'Graversen, J.H.' 3 ? primary 'Jensen, P.H.' 4 ? primary 'Etzerodt, M.' 5 ? primary 'Poulsen, F.M.' 6 ? primary 'Thoegersen, H.C.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Tetranectin _entity.formula_weight 13059.368 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TN, Plasminogen-kringle 4 binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;FTQTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQ PDGGKTENCAVLSGAANGKWFDKRCRDQLPYICQFGIV ; _entity_poly.pdbx_seq_one_letter_code_can ;FTQTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQ PDGGKTENCAVLSGAANGKWFDKRCRDQLPYICQFGIV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 THR n 1 3 GLN n 1 4 THR n 1 5 LYS n 1 6 THR n 1 7 PHE n 1 8 HIS n 1 9 GLU n 1 10 ALA n 1 11 SER n 1 12 GLU n 1 13 ASP n 1 14 CYS n 1 15 ILE n 1 16 SER n 1 17 ARG n 1 18 GLY n 1 19 GLY n 1 20 THR n 1 21 LEU n 1 22 SER n 1 23 THR n 1 24 PRO n 1 25 GLN n 1 26 THR n 1 27 GLY n 1 28 SER n 1 29 GLU n 1 30 ASN n 1 31 ASP n 1 32 ALA n 1 33 LEU n 1 34 TYR n 1 35 GLU n 1 36 TYR n 1 37 LEU n 1 38 ARG n 1 39 GLN n 1 40 SER n 1 41 VAL n 1 42 GLY n 1 43 ASN n 1 44 GLU n 1 45 ALA n 1 46 GLU n 1 47 ILE n 1 48 TRP n 1 49 LEU n 1 50 GLY n 1 51 LEU n 1 52 ASN n 1 53 ASP n 1 54 MET n 1 55 ALA n 1 56 ALA n 1 57 GLU n 1 58 GLY n 1 59 THR n 1 60 TRP n 1 61 VAL n 1 62 ASP n 1 63 MET n 1 64 THR n 1 65 GLY n 1 66 ALA n 1 67 ARG n 1 68 ILE n 1 69 ALA n 1 70 TYR n 1 71 LYS n 1 72 ASN n 1 73 TRP n 1 74 GLU n 1 75 THR n 1 76 GLU n 1 77 ILE n 1 78 THR n 1 79 ALA n 1 80 GLN n 1 81 PRO n 1 82 ASP n 1 83 GLY n 1 84 GLY n 1 85 LYS n 1 86 THR n 1 87 GLU n 1 88 ASN n 1 89 CYS n 1 90 ALA n 1 91 VAL n 1 92 LEU n 1 93 SER n 1 94 GLY n 1 95 ALA n 1 96 ALA n 1 97 ASN n 1 98 GLY n 1 99 LYS n 1 100 TRP n 1 101 PHE n 1 102 ASP n 1 103 LYS n 1 104 ARG n 1 105 CYS n 1 106 ARG n 1 107 ASP n 1 108 GLN n 1 109 LEU n 1 110 PRO n 1 111 TYR n 1 112 ILE n 1 113 CYS n 1 114 GLN n 1 115 PHE n 1 116 GLY n 1 117 ILE n 1 118 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TNA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pT7H6FXaTN3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TETN_HUMAN _struct_ref.pdbx_db_accession P05452 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FTQTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQ PDGGKTENCAVLSGAANGKWFDKRCRDQLPYICQFGIV ; _struct_ref.pdbx_align_begin 85 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1RJH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P05452 _struct_ref_seq.db_align_beg 85 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 202 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 181 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 1 1 3D_13C-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength '1 mM NaN3, 2 mM EDTA' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.6 mM U-15N-13C;' _pdbx_nmr_sample_details.solvent_system '90% H20, 10% D20, 1 mM NaN3, 2 mM EDTA, pH 6.7' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model UNITY _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1RJH _pdbx_nmr_refine.method 'simulated annealing protocol with an explicit layer of water' _pdbx_nmr_refine.details 'The structure is based on 1552 NOE-derived distance restraints and 194 Dihedral angle restraints.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1RJH _pdbx_nmr_details.text 'The structure was determined using standard spectra from the Varian Protein NMR pack.' # _pdbx_nmr_ensemble.entry_id 1RJH _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1RJH _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1 collection Varian 1 NMRPipe 1 processing Delaglio 2 Pronto 20020313 'data analysis' Kjaer 3 X-PLOR 98.1 'data analysis' Brunger 4 CYANA 1.0.6 'structure solution' Guentert 5 CNS 1.1 'structure solution' Brunger 6 CNS 1.1 refinement Brunger 7 # _exptl.entry_id 1RJH _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.density_Matthews ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1RJH _struct.title 'Structure of the Calcium Free Form of the C-type Lectin-like Domain of Tetranectin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RJH _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Apo, Calcium Free, CTLD, C-type Lectin-like Domain, Plasminogen kringle 4 binding, Tetranectin, Trans Proline, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 6 ? ARG A 17 ? THR A 69 ARG A 80 1 ? 12 HELX_P HELX_P2 2 THR A 26 ? GLN A 39 ? THR A 89 GLN A 102 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 77 A CYS 176 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 89 SG ? ? ? 1_555 A CYS 105 SG ? ? A CYS 152 A CYS 168 1_555 ? ? ? ? ? ? ? 2.030 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 19 ? LEU A 21 ? GLY A 82 LEU A 84 A 2 CYS A 113 ? PHE A 115 ? CYS A 176 PHE A 178 B 1 GLU A 46 ? TRP A 48 ? GLU A 109 TRP A 111 B 2 ALA A 90 ? SER A 93 ? ALA A 153 SER A 156 B 3 TRP A 100 ? ASP A 102 ? TRP A 163 ASP A 165 C 1 LEU A 51 ? ASN A 52 ? LEU A 114 ASN A 115 C 2 VAL A 61 ? ASP A 62 ? VAL A 124 ASP A 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 20 ? N THR A 83 O GLN A 114 ? O GLN A 177 B 1 2 N ILE A 47 ? N ILE A 110 O LEU A 92 ? O LEU A 155 B 2 3 N VAL A 91 ? N VAL A 154 O PHE A 101 ? O PHE A 164 C 1 2 N ASN A 52 ? N ASN A 115 O VAL A 61 ? O VAL A 124 # _database_PDB_matrix.entry_id 1RJH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RJH _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 64 64 PHE PHE A . n A 1 2 THR 2 65 65 THR THR A . n A 1 3 GLN 3 66 66 GLN GLN A . n A 1 4 THR 4 67 67 THR THR A . n A 1 5 LYS 5 68 68 LYS LYS A . n A 1 6 THR 6 69 69 THR THR A . n A 1 7 PHE 7 70 70 PHE PHE A . n A 1 8 HIS 8 71 71 HIS HIS A . n A 1 9 GLU 9 72 72 GLU GLU A . n A 1 10 ALA 10 73 73 ALA ALA A . n A 1 11 SER 11 74 74 SER SER A . n A 1 12 GLU 12 75 75 GLU GLU A . n A 1 13 ASP 13 76 76 ASP ASP A . n A 1 14 CYS 14 77 77 CYS CYS A . n A 1 15 ILE 15 78 78 ILE ILE A . n A 1 16 SER 16 79 79 SER SER A . n A 1 17 ARG 17 80 80 ARG ARG A . n A 1 18 GLY 18 81 81 GLY GLY A . n A 1 19 GLY 19 82 82 GLY GLY A . n A 1 20 THR 20 83 83 THR THR A . n A 1 21 LEU 21 84 84 LEU LEU A . n A 1 22 SER 22 85 85 SER SER A . n A 1 23 THR 23 86 86 THR THR A . n A 1 24 PRO 24 87 87 PRO PRO A . n A 1 25 GLN 25 88 88 GLN GLN A . n A 1 26 THR 26 89 89 THR THR A . n A 1 27 GLY 27 90 90 GLY GLY A . n A 1 28 SER 28 91 91 SER SER A . n A 1 29 GLU 29 92 92 GLU GLU A . n A 1 30 ASN 30 93 93 ASN ASN A . n A 1 31 ASP 31 94 94 ASP ASP A . n A 1 32 ALA 32 95 95 ALA ALA A . n A 1 33 LEU 33 96 96 LEU LEU A . n A 1 34 TYR 34 97 97 TYR TYR A . n A 1 35 GLU 35 98 98 GLU GLU A . n A 1 36 TYR 36 99 99 TYR TYR A . n A 1 37 LEU 37 100 100 LEU LEU A . n A 1 38 ARG 38 101 101 ARG ARG A . n A 1 39 GLN 39 102 102 GLN GLN A . n A 1 40 SER 40 103 103 SER SER A . n A 1 41 VAL 41 104 104 VAL VAL A . n A 1 42 GLY 42 105 105 GLY GLY A . n A 1 43 ASN 43 106 106 ASN ASN A . n A 1 44 GLU 44 107 107 GLU GLU A . n A 1 45 ALA 45 108 108 ALA ALA A . n A 1 46 GLU 46 109 109 GLU GLU A . n A 1 47 ILE 47 110 110 ILE ILE A . n A 1 48 TRP 48 111 111 TRP TRP A . n A 1 49 LEU 49 112 112 LEU LEU A . n A 1 50 GLY 50 113 113 GLY GLY A . n A 1 51 LEU 51 114 114 LEU LEU A . n A 1 52 ASN 52 115 115 ASN ASN A . n A 1 53 ASP 53 116 116 ASP ASP A . n A 1 54 MET 54 117 117 MET MET A . n A 1 55 ALA 55 118 118 ALA ALA A . n A 1 56 ALA 56 119 119 ALA ALA A . n A 1 57 GLU 57 120 120 GLU GLU A . n A 1 58 GLY 58 121 121 GLY GLY A . n A 1 59 THR 59 122 122 THR THR A . n A 1 60 TRP 60 123 123 TRP TRP A . n A 1 61 VAL 61 124 124 VAL VAL A . n A 1 62 ASP 62 125 125 ASP ASP A . n A 1 63 MET 63 126 126 MET MET A . n A 1 64 THR 64 127 127 THR THR A . n A 1 65 GLY 65 128 128 GLY GLY A . n A 1 66 ALA 66 129 129 ALA ALA A . n A 1 67 ARG 67 130 130 ARG ARG A . n A 1 68 ILE 68 131 131 ILE ILE A . n A 1 69 ALA 69 132 132 ALA ALA A . n A 1 70 TYR 70 133 133 TYR TYR A . n A 1 71 LYS 71 134 134 LYS LYS A . n A 1 72 ASN 72 135 135 ASN ASN A . n A 1 73 TRP 73 136 136 TRP TRP A . n A 1 74 GLU 74 137 137 GLU GLU A . n A 1 75 THR 75 138 138 THR THR A . n A 1 76 GLU 76 139 139 GLU GLU A . n A 1 77 ILE 77 140 140 ILE ILE A . n A 1 78 THR 78 141 141 THR THR A . n A 1 79 ALA 79 142 142 ALA ALA A . n A 1 80 GLN 80 143 143 GLN GLN A . n A 1 81 PRO 81 144 144 PRO PRO A . n A 1 82 ASP 82 145 145 ASP ASP A . n A 1 83 GLY 83 146 146 GLY GLY A . n A 1 84 GLY 84 147 147 GLY GLY A . n A 1 85 LYS 85 148 148 LYS LYS A . n A 1 86 THR 86 149 149 THR THR A . n A 1 87 GLU 87 150 150 GLU GLU A . n A 1 88 ASN 88 151 151 ASN ASN A . n A 1 89 CYS 89 152 152 CYS CYS A . n A 1 90 ALA 90 153 153 ALA ALA A . n A 1 91 VAL 91 154 154 VAL VAL A . n A 1 92 LEU 92 155 155 LEU LEU A . n A 1 93 SER 93 156 156 SER SER A . n A 1 94 GLY 94 157 157 GLY GLY A . n A 1 95 ALA 95 158 158 ALA ALA A . n A 1 96 ALA 96 159 159 ALA ALA A . n A 1 97 ASN 97 160 160 ASN ASN A . n A 1 98 GLY 98 161 161 GLY GLY A . n A 1 99 LYS 99 162 162 LYS LYS A . n A 1 100 TRP 100 163 163 TRP TRP A . n A 1 101 PHE 101 164 164 PHE PHE A . n A 1 102 ASP 102 165 165 ASP ASP A . n A 1 103 LYS 103 166 166 LYS LYS A . n A 1 104 ARG 104 167 167 ARG ARG A . n A 1 105 CYS 105 168 168 CYS CYS A . n A 1 106 ARG 106 169 169 ARG ARG A . n A 1 107 ASP 107 170 170 ASP ASP A . n A 1 108 GLN 108 171 171 GLN GLN A . n A 1 109 LEU 109 172 172 LEU LEU A . n A 1 110 PRO 110 173 173 PRO PRO A . n A 1 111 TYR 111 174 174 TYR TYR A . n A 1 112 ILE 112 175 175 ILE ILE A . n A 1 113 CYS 113 176 176 CYS CYS A . n A 1 114 GLN 114 177 177 GLN GLN A . n A 1 115 PHE 115 178 178 PHE PHE A . n A 1 116 GLY 116 179 179 GLY GLY A . n A 1 117 ILE 117 180 180 ILE ILE A . n A 1 118 VAL 118 181 181 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-20 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 109 ? ? HZ2 A LYS 166 ? ? 1.57 2 3 OD1 A ASP 125 ? ? HG1 A THR 127 ? ? 1.60 3 5 OE1 A GLU 109 ? ? HZ1 A LYS 166 ? ? 1.54 4 6 OE1 A GLU 98 ? ? HH21 A ARG 101 ? ? 1.59 5 7 H A GLN 88 ? ? OE1 A GLU 92 ? ? 1.59 6 9 HB2 A TRP 136 ? ? HB2 A GLU 139 ? ? 1.29 7 12 HG2 A GLU 137 ? ? HD22 A ASN 160 ? ? 1.30 8 12 OE1 A GLU 109 ? ? HZ1 A LYS 166 ? ? 1.59 9 13 HB1 A ALA 118 ? ? HB A THR 122 ? ? 1.29 10 15 HB2 A TRP 136 ? ? HB2 A GLU 139 ? ? 1.25 11 16 HB2 A GLN 66 ? ? HE1 A TYR 174 ? ? 1.30 12 18 HZ1 A LYS 68 ? ? HB3 A TYR 174 ? ? 1.26 13 18 OE1 A GLU 109 ? ? HZ1 A LYS 166 ? ? 1.57 14 18 OD2 A ASP 125 ? ? HG1 A THR 127 ? ? 1.57 15 19 OD2 A ASP 125 ? ? HG1 A THR 127 ? ? 1.56 16 20 HB2 A TRP 136 ? ? HB2 A GLU 139 ? ? 1.27 17 20 HG1 A THR 89 ? ? OE1 A GLU 92 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 103 ? ? -153.95 -55.78 2 1 GLU A 107 ? ? -94.77 36.95 3 1 ASP A 116 ? ? -87.52 39.54 4 1 MET A 117 ? ? -77.95 -135.84 5 1 ALA A 118 ? ? -81.61 43.84 6 1 ASN A 160 ? ? -176.65 -41.56 7 1 ILE A 180 ? ? -145.09 -49.06 8 2 SER A 103 ? ? -138.78 -57.54 9 2 THR A 138 ? ? -94.25 34.60 10 2 LYS A 148 ? ? -67.41 98.91 11 2 CYS A 152 ? ? 83.37 143.90 12 2 ASN A 160 ? ? -174.51 -34.35 13 2 PRO A 173 ? ? -62.58 -178.50 14 3 SER A 103 ? ? -151.69 -64.60 15 3 ASN A 106 ? ? 172.98 -62.66 16 3 GLU A 107 ? ? -86.30 37.46 17 3 MET A 117 ? ? -126.18 -162.10 18 3 CYS A 152 ? ? 78.79 110.80 19 3 ALA A 159 ? ? -90.75 -63.99 20 3 ASN A 160 ? ? -177.72 -19.92 21 3 PRO A 173 ? ? -63.11 -177.92 22 4 SER A 103 ? ? -149.42 -46.66 23 4 ASN A 160 ? ? -169.68 -25.76 24 4 LYS A 166 ? ? -153.69 -152.68 25 4 PRO A 173 ? ? -67.01 -177.68 26 4 ILE A 180 ? ? -164.82 111.66 27 5 SER A 85 ? ? -54.09 109.94 28 5 SER A 103 ? ? -153.63 -54.61 29 5 THR A 141 ? ? -110.79 -74.98 30 5 ASP A 145 ? ? -145.62 -56.34 31 5 LYS A 148 ? ? -62.90 99.44 32 5 ASN A 160 ? ? 175.61 -29.35 33 5 PHE A 164 ? ? -127.55 -168.01 34 5 PRO A 173 ? ? -67.26 -178.98 35 5 ILE A 180 ? ? -107.04 -70.89 36 6 SER A 103 ? ? -152.07 -62.98 37 6 ASN A 106 ? ? 173.80 -57.46 38 6 GLU A 107 ? ? -85.81 39.65 39 6 THR A 138 ? ? -84.06 39.56 40 6 CYS A 152 ? ? 70.94 100.13 41 6 ASN A 160 ? ? -177.78 -27.67 42 6 ILE A 180 ? ? 63.15 -24.83 43 7 SER A 103 ? ? -154.87 -58.92 44 7 ALA A 118 ? ? -107.49 -65.23 45 7 ALA A 119 ? ? -166.18 50.71 46 7 ASN A 160 ? ? 178.82 -40.99 47 8 SER A 103 ? ? -153.18 -59.52 48 8 ASN A 106 ? ? 175.29 -54.69 49 8 GLU A 107 ? ? -78.91 36.48 50 8 ALA A 119 ? ? 65.70 63.30 51 8 GLU A 139 ? ? -56.19 104.86 52 8 CYS A 152 ? ? 75.72 141.02 53 8 ASN A 160 ? ? -173.38 -32.89 54 8 PRO A 173 ? ? -68.77 -179.10 55 8 ILE A 180 ? ? 34.80 -96.56 56 9 SER A 103 ? ? -140.16 -50.55 57 9 GLU A 107 ? ? -94.21 47.83 58 9 ALA A 119 ? ? -169.22 62.91 59 9 ALA A 159 ? ? -94.85 -65.27 60 9 ASN A 160 ? ? -167.19 -37.35 61 9 CYS A 168 ? ? -65.14 2.96 62 9 ILE A 180 ? ? 62.20 67.50 63 10 SER A 103 ? ? -146.32 -59.54 64 10 GLU A 107 ? ? -81.69 32.44 65 10 MET A 117 ? ? -69.77 -163.23 66 10 ALA A 118 ? ? -67.38 88.77 67 10 PRO A 144 ? ? -64.84 -72.98 68 10 CYS A 152 ? ? 75.73 119.18 69 10 ASN A 160 ? ? -176.94 -37.72 70 10 PRO A 173 ? ? -67.04 -178.38 71 10 ILE A 180 ? ? -161.61 -68.97 72 11 SER A 103 ? ? -134.47 -61.41 73 11 MET A 117 ? ? -126.27 -55.29 74 11 ALA A 119 ? ? 68.63 -64.84 75 11 THR A 138 ? ? -87.71 39.56 76 11 GLU A 139 ? ? -55.68 107.40 77 11 ASN A 160 ? ? -171.58 -32.94 78 11 PRO A 173 ? ? -69.69 -178.63 79 12 SER A 103 ? ? -153.58 -46.45 80 12 GLU A 107 ? ? -91.85 33.47 81 12 ASP A 145 ? ? -165.83 38.64 82 12 CYS A 152 ? ? 96.56 147.08 83 12 ASN A 160 ? ? -174.67 -30.60 84 12 PRO A 173 ? ? -65.79 -177.10 85 13 LYS A 68 ? ? -171.26 -178.50 86 13 SER A 103 ? ? -139.08 -44.24 87 13 CYS A 152 ? ? -169.97 97.43 88 13 ASN A 160 ? ? 176.91 -24.84 89 13 PHE A 164 ? ? -126.96 -169.03 90 14 SER A 103 ? ? -153.67 -47.35 91 14 MET A 117 ? ? -126.77 -75.53 92 14 THR A 138 ? ? -91.67 40.31 93 14 GLU A 139 ? ? -51.31 107.57 94 14 THR A 141 ? ? -104.26 68.71 95 14 ALA A 142 ? ? -65.74 98.27 96 14 PRO A 144 ? ? -71.44 37.31 97 14 ASP A 145 ? ? -142.40 -6.26 98 14 ASN A 160 ? ? 179.94 -30.89 99 14 PRO A 173 ? ? -57.69 179.59 100 15 SER A 103 ? ? -135.89 -65.31 101 15 ASN A 106 ? ? 173.29 -40.25 102 15 GLU A 120 ? ? -58.54 107.07 103 15 ASN A 160 ? ? -171.35 -27.46 104 15 PRO A 173 ? ? -57.12 174.67 105 15 ILE A 180 ? ? 73.27 -48.55 106 16 SER A 103 ? ? -151.32 -51.85 107 16 MET A 117 ? ? -128.33 -57.71 108 16 ASP A 145 ? ? -155.19 46.96 109 16 ASN A 160 ? ? -171.69 -32.03 110 16 PHE A 164 ? ? -116.52 -168.82 111 16 PRO A 173 ? ? -63.41 -178.40 112 17 SER A 103 ? ? -124.32 -50.20 113 17 ALA A 118 ? ? -110.55 -169.70 114 17 PRO A 144 ? ? -66.35 -82.37 115 17 CYS A 152 ? ? 68.12 105.99 116 17 ASN A 160 ? ? -177.58 -35.66 117 18 ALA A 119 ? ? 158.78 -15.87 118 18 PRO A 144 ? ? -67.63 -73.32 119 18 ASN A 160 ? ? -148.67 -36.84 120 18 CYS A 168 ? ? -66.70 3.07 121 18 PRO A 173 ? ? -59.84 179.70 122 18 ILE A 180 ? ? 72.96 105.94 123 19 SER A 103 ? ? -137.80 -55.32 124 19 ALA A 118 ? ? -99.27 -63.01 125 19 ALA A 119 ? ? -176.42 -30.62 126 19 PRO A 144 ? ? -78.95 -72.31 127 19 ASP A 145 ? ? -100.09 46.06 128 19 ASN A 160 ? ? -170.50 -33.51 129 19 PRO A 173 ? ? -61.44 -179.15 130 19 ILE A 180 ? ? 60.33 87.53 131 20 SER A 103 ? ? -137.83 -52.38 132 20 ASP A 145 ? ? -84.97 45.28 133 20 CYS A 152 ? ? 69.12 106.93 134 20 ASN A 160 ? ? -173.33 -34.68 #