HEADER TRANSFERASE 23-NOV-03 1RKU TITLE CRYSTAL STRUCTURE OF THRH GENE PRODUCT OF PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMOSERINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: THRH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX KEYWDS PHOSPHOSERINE PHOSPHATASE, PHOSPHOSERINE:HOMOSERINE KEYWDS 2 PHOSPHOTRANSFERASE, THRH, PHOSPHOSERINE PHOSPHORYL DONOR, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.SINGH,K.YANG,K.SUBRAMANIAN,S.KARTHIKEYAN,T.HUYNH,X.ZHANG, AUTHOR 2 M.A.PHILLIPS,H.ZHANG REVDAT 4 14-FEB-24 1RKU 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1RKU 1 VERSN REVDAT 2 24-FEB-09 1RKU 1 VERSN REVDAT 1 30-MAR-04 1RKU 0 JRNL AUTH S.K.SINGH,K.YANG,S.KARTHIKEYAN,T.HUYNH,X.ZHANG,M.A.PHILLIPS, JRNL AUTH 2 H.ZHANG JRNL TITL THE THRH GENE PRODUCT OF PSEUDOMONAS AERUGINOSA IS A DUAL JRNL TITL 2 ACTIVITY ENZYME WITH A NOVEL PHOSPHOSERINE:HOMOSERINE JRNL TITL 3 PHOSPHOTRANSFERASE ACTIVITY. JRNL REF J.BIOL.CHEM. V. 279 13166 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14699121 JRNL DOI 10.1074/JBC.M311393200 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.27 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 71055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3742 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3879 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 221 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3336 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 397 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.19000 REMARK 3 B22 (A**2) : 2.16000 REMARK 3 B33 (A**2) : -0.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.338 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3456 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4664 ; 1.528 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 410 ; 5.574 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 524 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2590 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1701 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 267 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.123 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 74 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.239 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2064 ; 1.016 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3349 ; 1.831 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1392 ; 2.826 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1315 ; 4.445 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1RKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020846. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97679 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74797 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 18.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 48.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, SODIUM CACODYLATE, MGCL2, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.88600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.88600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.87450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.61800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.87450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.61800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.88600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.87450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.61800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.88600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.87450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.61800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 603 O HOH A 897 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 750 O HOH A 750 3655 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 7 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 0 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP B 7 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP B 35 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 120 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 186 18.29 -143.24 REMARK 500 LEU B 8 -70.24 -94.08 REMARK 500 THR B 92 -178.57 -69.76 REMARK 500 CYS B 111 -155.33 -147.84 REMARK 500 ASN B 155 4.25 -67.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD2 REMARK 620 2 GLU A 9 O 87.0 REMARK 620 3 ASP A 152 OD1 87.8 89.7 REMARK 620 4 HOH A 719 O 82.4 165.4 79.9 REMARK 620 5 HOH A 814 O 94.8 98.8 171.3 92.2 REMARK 620 6 HOH A 843 O 173.1 89.0 86.5 100.4 91.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 152 OD2 REMARK 620 2 HOH A 725 O 96.6 REMARK 620 3 HOH A 844 O 82.6 95.0 REMARK 620 4 HOH A 845 O 95.1 97.3 167.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 7 OD2 REMARK 620 2 GLU B 9 O 88.1 REMARK 620 3 ASP B 152 OD1 84.9 93.2 REMARK 620 4 HOH B 748 O 171.6 91.8 86.7 REMARK 620 5 HOH B 780 O 84.3 170.7 80.7 94.8 REMARK 620 6 HOH B 846 O 94.5 94.6 172.1 93.8 91.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 152 OD2 REMARK 620 2 HOH B 749 O 95.3 REMARK 620 3 HOH B 813 O 95.8 96.1 REMARK 620 4 HOH B 840 O 174.9 83.6 89.3 REMARK 620 5 HOH B 847 O 91.9 166.2 94.9 88.2 REMARK 620 6 HOH B 872 O 83.2 85.3 178.4 91.7 83.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RKV RELATED DB: PDB REMARK 900 STRUCTURE OF PHOSPHATE COMPLEX OF THRH FROM PSEUDOMONAS AERUGINOSA DBREF 1RKU A 1 205 UNP Q9I2Y2 Q9I2Y2_PSEAE 1 205 DBREF 1RKU B 1 205 UNP Q9I2Y2 Q9I2Y2_PSEAE 1 205 SEQADV 1RKU ASP A 0 UNP Q9I2Y2 CLONING ARTIFACT SEQADV 1RKU ASP B 0 UNP Q9I2Y2 CLONING ARTIFACT SEQRES 1 A 206 ASP MET GLU ILE ALA CYS LEU ASP LEU GLU GLY VAL LEU SEQRES 2 A 206 VAL PRO GLU ILE TRP ILE ALA PHE ALA GLU LYS THR GLY SEQRES 3 A 206 ILE ASP ALA LEU LYS ALA THR THR ARG ASP ILE PRO ASP SEQRES 4 A 206 TYR ASP VAL LEU MET LYS GLN ARG LEU ARG ILE LEU ASP SEQRES 5 A 206 GLU HIS GLY LEU LYS LEU GLY ASP ILE GLN GLU VAL ILE SEQRES 6 A 206 ALA THR LEU LYS PRO LEU GLU GLY ALA VAL GLU PHE VAL SEQRES 7 A 206 ASP TRP LEU ARG GLU ARG PHE GLN VAL VAL ILE LEU SER SEQRES 8 A 206 ASP THR PHE TYR GLU PHE SER GLN PRO LEU MET ARG GLN SEQRES 9 A 206 LEU GLY PHE PRO THR LEU LEU CYS HIS LYS LEU GLU ILE SEQRES 10 A 206 ASP ASP SER ASP ARG VAL VAL GLY TYR GLN LEU ARG GLN SEQRES 11 A 206 LYS ASP PRO LYS ARG GLN SER VAL ILE ALA PHE LYS SER SEQRES 12 A 206 LEU TYR TYR ARG VAL ILE ALA ALA GLY ASP SER TYR ASN SEQRES 13 A 206 ASP THR THR MET LEU SER GLU ALA HIS ALA GLY ILE LEU SEQRES 14 A 206 PHE HIS ALA PRO GLU ASN VAL ILE ARG GLU PHE PRO GLN SEQRES 15 A 206 PHE PRO ALA VAL HIS THR TYR GLU ASP LEU LYS ARG GLU SEQRES 16 A 206 PHE LEU LYS ALA SER SER ARG SER LEU SER LEU SEQRES 1 B 206 ASP MET GLU ILE ALA CYS LEU ASP LEU GLU GLY VAL LEU SEQRES 2 B 206 VAL PRO GLU ILE TRP ILE ALA PHE ALA GLU LYS THR GLY SEQRES 3 B 206 ILE ASP ALA LEU LYS ALA THR THR ARG ASP ILE PRO ASP SEQRES 4 B 206 TYR ASP VAL LEU MET LYS GLN ARG LEU ARG ILE LEU ASP SEQRES 5 B 206 GLU HIS GLY LEU LYS LEU GLY ASP ILE GLN GLU VAL ILE SEQRES 6 B 206 ALA THR LEU LYS PRO LEU GLU GLY ALA VAL GLU PHE VAL SEQRES 7 B 206 ASP TRP LEU ARG GLU ARG PHE GLN VAL VAL ILE LEU SER SEQRES 8 B 206 ASP THR PHE TYR GLU PHE SER GLN PRO LEU MET ARG GLN SEQRES 9 B 206 LEU GLY PHE PRO THR LEU LEU CYS HIS LYS LEU GLU ILE SEQRES 10 B 206 ASP ASP SER ASP ARG VAL VAL GLY TYR GLN LEU ARG GLN SEQRES 11 B 206 LYS ASP PRO LYS ARG GLN SER VAL ILE ALA PHE LYS SER SEQRES 12 B 206 LEU TYR TYR ARG VAL ILE ALA ALA GLY ASP SER TYR ASN SEQRES 13 B 206 ASP THR THR MET LEU SER GLU ALA HIS ALA GLY ILE LEU SEQRES 14 B 206 PHE HIS ALA PRO GLU ASN VAL ILE ARG GLU PHE PRO GLN SEQRES 15 B 206 PHE PRO ALA VAL HIS THR TYR GLU ASP LEU LYS ARG GLU SEQRES 16 B 206 PHE LEU LYS ALA SER SER ARG SER LEU SER LEU HET MG A 301 1 HET MG A 302 1 HET EDO A 401 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 407 4 HET MG B 303 1 HET MG B 304 1 HET EDO B 402 4 HET EDO B 403 4 HET EDO B 406 4 HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG 4(MG 2+) FORMUL 5 EDO 7(C2 H6 O2) FORMUL 14 HOH *397(H2 O) HELIX 1 1 GLU A 15 GLY A 25 1 11 HELIX 2 2 ILE A 26 ALA A 31 5 6 HELIX 3 3 ASP A 38 HIS A 53 1 16 HELIX 4 4 LYS A 56 ALA A 65 1 10 HELIX 5 5 GLY A 72 GLU A 82 1 11 HELIX 6 6 TYR A 94 LEU A 104 1 11 HELIX 7 7 ASP A 131 LEU A 143 1 13 HELIX 8 8 ASP A 156 ALA A 163 1 8 HELIX 9 9 PRO A 172 PHE A 179 1 8 HELIX 10 10 THR A 187 SER A 199 1 13 HELIX 11 11 GLU B 15 GLY B 25 1 11 HELIX 12 12 ILE B 26 ALA B 31 5 6 HELIX 13 13 ASP B 38 HIS B 53 1 16 HELIX 14 14 LYS B 56 ALA B 65 1 10 HELIX 15 15 GLY B 72 GLU B 82 1 11 HELIX 16 16 TYR B 94 LEU B 104 1 11 HELIX 17 17 ASP B 131 LEU B 143 1 13 HELIX 18 18 SER B 153 ASN B 155 5 3 HELIX 19 19 ASP B 156 ALA B 163 1 8 HELIX 20 20 PRO B 172 PHE B 179 1 8 HELIX 21 21 THR B 187 SER B 199 1 13 SHEET 1 A 7 VAL A 122 GLN A 126 0 SHEET 2 A 7 LEU A 109 ILE A 116 -1 N GLU A 115 O GLY A 124 SHEET 3 A 7 GLN A 85 PHE A 93 1 N ILE A 88 O LEU A 110 SHEET 4 A 7 GLU A 2 ASP A 7 1 N LEU A 6 O LEU A 89 SHEET 5 A 7 ARG A 146 GLY A 151 1 O ARG A 146 N ILE A 3 SHEET 6 A 7 ALA A 165 PHE A 169 1 O ALA A 165 N ALA A 149 SHEET 7 A 7 ALA A 184 VAL A 185 1 O VAL A 185 N LEU A 168 SHEET 1 B 7 VAL B 122 GLN B 126 0 SHEET 2 B 7 LEU B 109 ILE B 116 -1 N LYS B 113 O GLN B 126 SHEET 3 B 7 GLN B 85 PHE B 93 1 N ILE B 88 O LEU B 110 SHEET 4 B 7 GLU B 2 LEU B 6 1 N ALA B 4 O GLN B 85 SHEET 5 B 7 ARG B 146 GLY B 151 1 O ILE B 148 N ILE B 3 SHEET 6 B 7 ALA B 165 PHE B 169 1 O ALA B 165 N ALA B 149 SHEET 7 B 7 ALA B 184 VAL B 185 1 O VAL B 185 N LEU B 168 LINK OD2 ASP A 7 MG MG A 301 1555 1555 2.05 LINK O GLU A 9 MG MG A 301 1555 1555 2.12 LINK OD1 ASP A 152 MG MG A 301 1555 1555 2.23 LINK OD2 ASP A 152 MG MG A 302 1555 1555 2.10 LINK MG MG A 301 O HOH A 719 1555 1555 1.99 LINK MG MG A 301 O HOH A 814 1555 1555 1.81 LINK MG MG A 301 O HOH A 843 1555 1555 2.13 LINK MG MG A 302 O HOH A 725 1555 1555 2.30 LINK MG MG A 302 O HOH A 844 1555 1555 2.50 LINK MG MG A 302 O HOH A 845 1555 1555 1.93 LINK OD2 ASP B 7 MG MG B 303 1555 1555 2.05 LINK O GLU B 9 MG MG B 303 1555 1555 2.04 LINK OD1 ASP B 152 MG MG B 303 1555 1555 2.17 LINK OD2 ASP B 152 MG MG B 304 1555 1555 2.05 LINK MG MG B 303 O HOH B 748 1555 1555 2.00 LINK MG MG B 303 O HOH B 780 1555 1555 2.03 LINK MG MG B 303 O HOH B 846 1555 1555 2.07 LINK MG MG B 304 O HOH B 749 1555 1555 2.08 LINK MG MG B 304 O HOH B 813 1555 1555 1.89 LINK MG MG B 304 O HOH B 840 1555 1555 2.05 LINK MG MG B 304 O HOH B 847 1555 1555 2.03 LINK MG MG B 304 O HOH B 872 1555 1555 2.41 SITE 1 AC1 6 ASP A 7 GLU A 9 ASP A 152 HOH A 719 SITE 2 AC1 6 HOH A 814 HOH A 843 SITE 1 AC2 4 ASP A 152 HOH A 725 HOH A 844 HOH A 845 SITE 1 AC3 6 ASP B 7 GLU B 9 ASP B 152 HOH B 748 SITE 2 AC3 6 HOH B 780 HOH B 846 SITE 1 AC4 6 ASP B 152 HOH B 749 HOH B 813 HOH B 840 SITE 2 AC4 6 HOH B 847 HOH B 872 SITE 1 AC5 9 THR A 24 GLY A 25 ILE A 26 ASP A 78 SITE 2 AC5 9 ARG A 81 HOH A 552 HOH A 866 GLY B 105 SITE 3 AC5 9 PHE B 106 SITE 1 AC6 5 ASP A 0 MET A 1 GLU A 2 GLN A 85 SITE 2 AC6 5 ARG A 201 SITE 1 AC7 6 GLN A 129 LYS A 130 HOH A 643 LYS B 130 SITE 2 AC7 6 TYR B 144 HOH B 581 SITE 1 AC8 8 ASP A 91 ASP A 131 PRO A 132 LYS A 133 SITE 2 AC8 8 ARG A 134 THR A 158 HOH A 512 HOH A 727 SITE 1 AC9 10 GLY A 25 ASP A 27 LYS A 30 HOH A 531 SITE 2 AC9 10 VAL B 74 ASP B 78 ARG B 81 GLN B 103 SITE 3 AC9 10 LEU B 104 GLY B 105 SITE 1 BC1 6 ASP B 0 MET B 1 GLU B 2 ARG B 83 SITE 2 BC1 6 GLN B 85 ARG B 201 SITE 1 BC2 4 GLU B 75 ASP B 78 GLU B 82 HOH B 576 CRYST1 71.749 97.236 131.772 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013937 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007589 0.00000