data_1RV5 # _entry.id 1RV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RV5 pdb_00001rv5 10.2210/pdb1rv5/pdb RCSB PD0013 ? ? WWPDB D_1000176239 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RV5 _pdbx_database_status.recvd_initial_deposition_date 1998-06-01 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Horton, N.C.' 1 'Perona, J.J.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Role of protein-induced bending in the specificity of DNA recognition: crystal structure of EcoRV endonuclease complexed with d(AAAGAT) + d(ATCTT). ; J.Mol.Biol. 277 779 783 1998 JMOBAK UK 0022-2836 0070 ? 9545372 10.1006/jmbi.1998.1655 1 'The Crystal Structure of EcoRV Endonuclease and of its Complexes with Cognate and Non-Cognate DNA Fragments' 'Embo J.' 12 1781 ? 1993 EMJODG UK 0261-4189 0897 ? ? ? 2 'Structure and Function of Restriction Endonucleases' Curr.Opin.Struct.Biol. 2 93 ? 1992 COSBEF UK 0959-440X 0801 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horton, N.C.' 1 ? primary 'Perona, J.J.' 2 ? 1 'Winkler, F.K.' 3 ? 1 'Banner, D.W.' 4 ? 1 'Oefner, C.' 5 ? 1 'Tsernoglou, D.' 6 ? 1 'Brown, R.S.' 7 ? 1 'Heathman, S.P.' 8 ? 1 'Bryan, R.K.' 9 ? 1 'Martin, P.D.' 10 ? 1 'Petratos, K.' 11 ? 1 'Wilson, K.S.' 12 ? 2 'Winkler, F.K.' 13 ? # _cell.entry_id 1RV5 _cell.length_a 49.600 _cell.length_b 50.400 _cell.length_c 63.900 _cell.angle_alpha 96.40 _cell.angle_beta 109.20 _cell.angle_gamma 108.50 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RV5 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting triclinic _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*AP*AP*GP*AP*T*AP*TP*CP*TP*T)-3'" 3356.235 2 ? ? ? ? 2 polymer nat 'ECORV ENDONUCLEASE' 28559.158 2 3.1.21.4 ? ? ? 3 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'COGNATE SEQUENCE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DG)(DA)(DT)(DA)(DT)(DC)(DT)(DT)' AAAGATATCTT C,D ? 2 'polypeptide(L)' no no ;SLRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPS EPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPK PYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIY RGRK ; ;SLRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPS EPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPK PYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIY RGRK ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DA n 1 4 DG n 1 5 DA n 1 6 DT n 1 7 DA n 1 8 DT n 1 9 DC n 1 10 DT n 1 11 DT n 2 1 SER n 2 2 LEU n 2 3 ARG n 2 4 SER n 2 5 ASP n 2 6 LEU n 2 7 ILE n 2 8 ASN n 2 9 ALA n 2 10 LEU n 2 11 TYR n 2 12 ASP n 2 13 GLU n 2 14 ASN n 2 15 GLN n 2 16 LYS n 2 17 TYR n 2 18 ASP n 2 19 VAL n 2 20 CYS n 2 21 GLY n 2 22 ILE n 2 23 ILE n 2 24 SER n 2 25 ALA n 2 26 GLU n 2 27 GLY n 2 28 LYS n 2 29 ILE n 2 30 TYR n 2 31 PRO n 2 32 LEU n 2 33 GLY n 2 34 SER n 2 35 ASP n 2 36 THR n 2 37 LYS n 2 38 VAL n 2 39 LEU n 2 40 SER n 2 41 THR n 2 42 ILE n 2 43 PHE n 2 44 GLU n 2 45 LEU n 2 46 PHE n 2 47 SER n 2 48 ARG n 2 49 PRO n 2 50 ILE n 2 51 ILE n 2 52 ASN n 2 53 LYS n 2 54 ILE n 2 55 ALA n 2 56 GLU n 2 57 LYS n 2 58 HIS n 2 59 GLY n 2 60 TYR n 2 61 ILE n 2 62 VAL n 2 63 GLU n 2 64 GLU n 2 65 PRO n 2 66 LYS n 2 67 GLN n 2 68 GLN n 2 69 ASN n 2 70 HIS n 2 71 TYR n 2 72 PRO n 2 73 ASP n 2 74 PHE n 2 75 THR n 2 76 LEU n 2 77 TYR n 2 78 LYS n 2 79 PRO n 2 80 SER n 2 81 GLU n 2 82 PRO n 2 83 ASN n 2 84 LYS n 2 85 LYS n 2 86 ILE n 2 87 ALA n 2 88 ILE n 2 89 ASP n 2 90 ILE n 2 91 LYS n 2 92 THR n 2 93 THR n 2 94 TYR n 2 95 THR n 2 96 ASN n 2 97 LYS n 2 98 GLU n 2 99 ASN n 2 100 GLU n 2 101 LYS n 2 102 ILE n 2 103 LYS n 2 104 PHE n 2 105 THR n 2 106 LEU n 2 107 GLY n 2 108 GLY n 2 109 TYR n 2 110 THR n 2 111 SER n 2 112 PHE n 2 113 ILE n 2 114 ARG n 2 115 ASN n 2 116 ASN n 2 117 THR n 2 118 LYS n 2 119 ASN n 2 120 ILE n 2 121 VAL n 2 122 TYR n 2 123 PRO n 2 124 PHE n 2 125 ASP n 2 126 GLN n 2 127 TYR n 2 128 ILE n 2 129 ALA n 2 130 HIS n 2 131 TRP n 2 132 ILE n 2 133 ILE n 2 134 GLY n 2 135 TYR n 2 136 VAL n 2 137 TYR n 2 138 THR n 2 139 ARG n 2 140 VAL n 2 141 ALA n 2 142 THR n 2 143 ARG n 2 144 LYS n 2 145 SER n 2 146 SER n 2 147 LEU n 2 148 LYS n 2 149 THR n 2 150 TYR n 2 151 ASN n 2 152 ILE n 2 153 ASN n 2 154 GLU n 2 155 LEU n 2 156 ASN n 2 157 GLU n 2 158 ILE n 2 159 PRO n 2 160 LYS n 2 161 PRO n 2 162 TYR n 2 163 LYS n 2 164 GLY n 2 165 VAL n 2 166 LYS n 2 167 VAL n 2 168 PHE n 2 169 LEU n 2 170 GLN n 2 171 ASP n 2 172 LYS n 2 173 TRP n 2 174 VAL n 2 175 ILE n 2 176 ALA n 2 177 GLY n 2 178 ASP n 2 179 LEU n 2 180 ALA n 2 181 GLY n 2 182 SER n 2 183 GLY n 2 184 ASN n 2 185 THR n 2 186 THR n 2 187 ASN n 2 188 ILE n 2 189 GLY n 2 190 SER n 2 191 ILE n 2 192 HIS n 2 193 ALA n 2 194 HIS n 2 195 TYR n 2 196 LYS n 2 197 ASP n 2 198 PHE n 2 199 VAL n 2 200 GLU n 2 201 GLY n 2 202 LYS n 2 203 GLY n 2 204 ILE n 2 205 PHE n 2 206 ASP n 2 207 SER n 2 208 GLU n 2 209 ASP n 2 210 GLU n 2 211 PHE n 2 212 LEU n 2 213 ASP n 2 214 TYR n 2 215 TRP n 2 216 ARG n 2 217 ASN n 2 218 TYR n 2 219 GLU n 2 220 ARG n 2 221 THR n 2 222 SER n 2 223 GLN n 2 224 LEU n 2 225 ARG n 2 226 ASN n 2 227 ASP n 2 228 LYS n 2 229 TYR n 2 230 ASN n 2 231 ASN n 2 232 ILE n 2 233 SER n 2 234 GLU n 2 235 TYR n 2 236 ARG n 2 237 ASN n 2 238 TRP n 2 239 ILE n 2 240 TYR n 2 241 ARG n 2 242 GLY n 2 243 ARG n 2 244 LYS n # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP T2E5_ECOLI 2 ? ? P04390 ? 2 PDB 1RV5 1 ? ? 1RV5 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RV5 A 1 ? 244 ? P04390 1 ? 244 ? 2 245 2 1 1RV5 B 1 ? 244 ? P04390 1 ? 244 ? 2 245 3 2 1RV5 C 1 ? 11 ? 1RV5 1 ? 11 ? 1 11 4 2 1RV5 D 1 ? 11 ? 1RV5 1 ? 11 ? 1 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RV5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.45 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'pH 7.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-04-15 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1RV5 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.1 _reflns.number_obs 29460 _reflns.number_all ? _reflns.percent_possible_obs 80 _reflns.pdbx_Rmerge_I_obs 0.0780000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 29.4 _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1RV5 _refine.ls_number_reflns_obs 27705 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF 10000 _refine.pdbx_data_cutoff_low_absF 0.1 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.1 _refine.ls_percent_reflns_obs 80 _refine.ls_R_factor_obs 0.1930000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1930000 _refine.ls_R_factor_R_free 0.2720000 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 2 _refine.ls_number_reflns_R_free 488 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1RVA _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RV5 _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4649 _refine_hist.pdbx_number_atoms_nucleic_acid 478 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 492 _refine_hist.number_atoms_total 5619 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.62 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.62 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.483 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.1 _refine_ls_shell.d_res_low 2.19 _refine_ls_shell.number_reflns_R_work 2007 _refine_ls_shell.R_factor_R_work 0.3040000 _refine_ls_shell.percent_reflns_obs 58. _refine_ls_shell.R_factor_R_free 0.2720000 _refine_ls_shell.R_factor_R_free_error 0.043 _refine_ls_shell.percent_reflns_R_free 1.55 _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PR0 TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARNDBX.DNA0 TOPNDBX.DNA 'X-RAY DIFFRACTION' # _struct.entry_id 1RV5 _struct.title 'COMPLEX OF ECORV ENDONUCLEASE WITH D(AAAGAT)/D(ATCTT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RV5 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'ENDONUCLEASE ECORV-DNA COMPLEX, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU C 2 ? LYS C 16 ? LEU A 3 LYS A 17 1 ? 15 HELX_P HELX_P2 2 THR C 36 ? HIS C 58 ? THR A 37 HIS A 59 1 ? 23 HELX_P HELX_P3 3 PRO C 79 ? GLU C 81 ? PRO A 80 GLU A 82 5 ? 3 HELX_P HELX_P4 4 PHE C 124 ? GLN C 126 ? PHE A 125 GLN A 127 5 ? 3 HELX_P HELX_P5 5 ILE C 152 ? GLU C 157 ? ILE A 153 GLU A 158 5 ? 6 HELX_P HELX_P6 6 LYS C 172 ? ILE C 175 ? LYS A 173 ILE A 176 1 ? 4 HELX_P HELX_P7 7 TYR C 195 ? GLU C 200 ? TYR A 196 GLU A 201 1 ? 6 HELX_P HELX_P8 8 GLU C 208 ? ARG C 216 ? GLU A 209 ARG A 217 1 ? 9 HELX_P HELX_P9 9 SER C 222 ? ARG C 225 ? SER A 223 ARG A 226 1 ? 4 HELX_P HELX_P10 10 ILE C 232 ? TYR C 240 ? ILE A 233 TYR A 241 1 ? 9 HELX_P HELX_P11 12 THR D 36 ? HIS D 58 ? THR B 37 HIS B 59 1 ? 23 HELX_P HELX_P12 13 PHE D 124 ? GLN D 126 ? PHE B 125 GLN B 127 5 ? 3 HELX_P HELX_P13 14 LEU D 155 ? GLU D 157 ? LEU B 156 GLU B 158 5 ? 3 HELX_P HELX_P14 15 LYS D 172 ? ILE D 175 ? LYS B 173 ILE B 176 1 ? 4 HELX_P HELX_P15 16 TYR D 195 ? GLU D 200 ? TYR B 196 GLU B 201 1 ? 6 HELX_P HELX_P16 17 GLU D 208 ? ASN D 217 ? GLU B 209 ASN B 218 1 ? 10 HELX_P HELX_P17 18 SER D 222 ? ASP D 227 ? SER B 223 ASP B 228 1 ? 6 HELX_P HELX_P18 19 ILE D 232 ? TYR D 240 ? ILE B 233 TYR B 241 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 11 N3 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 11 O4 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 10 N3 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 10 O4 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 5 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 7 N1 ? ? C DT 6 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 7 N6 ? ? C DT 6 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 6 N3 ? ? C DA 7 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 6 O4 ? ? C DA 7 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 8 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 10 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 10 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 71 C . ? TYR 72 A PRO 72 C ? PRO 73 A 1 -0.51 2 TYR 71 D . ? TYR 72 B PRO 72 D ? PRO 73 B 1 -0.89 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY C 21 ? ILE C 23 ? GLY A 22 ILE A 24 A 2 ILE C 29 ? PRO C 31 ? ILE A 30 PRO A 32 B 1 ILE C 61 ? GLU C 63 ? ILE A 62 GLU A 64 B 2 PHE C 74 ? TYR C 77 ? PHE A 75 TYR A 78 B 3 LYS C 85 ? THR C 95 ? LYS A 86 THR A 96 B 4 TYR C 127 ? THR C 138 ? TYR A 128 THR A 139 B 5 VAL C 165 ? ASP C 171 ? VAL A 166 ASP A 172 C 1 GLY D 21 ? ILE D 23 ? GLY B 22 ILE B 24 C 2 LYS D 28 ? PRO D 31 ? LYS B 29 PRO B 32 C 3 THR D 149 ? ASN D 151 ? THR B 150 ASN B 152 D 1 ILE D 61 ? GLU D 63 ? ILE B 62 GLU B 64 D 2 PHE D 74 ? TYR D 77 ? PHE B 75 TYR B 78 D 3 LYS D 85 ? THR D 95 ? LYS B 86 THR B 96 D 4 TYR D 127 ? ARG D 139 ? TYR B 128 ARG B 140 D 5 TYR D 162 ? ASP D 171 ? TYR B 163 ASP B 172 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 22 ? O ILE A 23 N TYR C 30 ? N TYR A 31 B 1 2 O ILE C 61 ? O ILE A 62 N TYR C 77 ? N TYR A 78 B 2 3 O PHE C 74 ? O PHE A 75 N ILE C 88 ? N ILE A 89 B 3 4 O LYS C 85 ? O LYS A 86 N ILE C 128 ? N ILE A 129 B 4 5 O ILE C 132 ? O ILE A 133 N GLN C 170 ? N GLN A 171 C 1 2 O ILE D 22 ? O ILE B 23 N TYR D 30 ? N TYR B 31 C 2 3 O ILE D 29 ? O ILE B 30 N TYR D 150 ? N TYR B 151 D 1 2 O ILE D 61 ? O ILE B 62 N TYR D 77 ? N TYR B 78 D 2 3 O PHE D 74 ? O PHE B 75 N ILE D 88 ? N ILE B 89 D 3 4 O LYS D 85 ? O LYS B 86 N ILE D 128 ? N ILE B 129 D 4 5 O ILE D 132 ? O ILE B 133 N GLN D 170 ? N GLN B 171 # _database_PDB_matrix.entry_id 1RV5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RV5 _atom_sites.fract_transf_matrix[1][1] 0.020161 _atom_sites.fract_transf_matrix[1][2] 0.006746 _atom_sites.fract_transf_matrix[1][3] 0.008909 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020922 _atom_sites.fract_transf_matrix[2][3] 0.005195 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017074 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A C . n A 1 2 DA 2 2 2 DA A C . n A 1 3 DA 3 3 3 DA A C . n A 1 4 DG 4 4 4 DG G C . n A 1 5 DA 5 5 5 DA A C . n A 1 6 DT 6 6 6 DT T C . n A 1 7 DA 7 7 7 DA A C . n A 1 8 DT 8 8 8 DT T C . n A 1 9 DC 9 9 9 DC C C . n A 1 10 DT 10 10 10 DT T C . n A 1 11 DT 11 11 11 DT T C . n B 1 1 DA 1 1 1 DA A D . n B 1 2 DA 2 2 2 DA A D . n B 1 3 DA 3 3 3 DA A D . n B 1 4 DG 4 4 4 DG G D . n B 1 5 DA 5 5 5 DA A D . n B 1 6 DT 6 6 6 DT T D . n B 1 7 DA 7 7 7 DA A D . n B 1 8 DT 8 8 8 DT T D . n B 1 9 DC 9 9 9 DC C D . n B 1 10 DT 10 10 10 DT T D . n B 1 11 DT 11 11 11 DT T D . n C 2 1 SER 1 2 2 SER SER A . n C 2 2 LEU 2 3 3 LEU LEU A . n C 2 3 ARG 3 4 4 ARG ARG A . n C 2 4 SER 4 5 5 SER SER A . n C 2 5 ASP 5 6 6 ASP ASP A . n C 2 6 LEU 6 7 7 LEU LEU A . n C 2 7 ILE 7 8 8 ILE ILE A . n C 2 8 ASN 8 9 9 ASN ASN A . n C 2 9 ALA 9 10 10 ALA ALA A . n C 2 10 LEU 10 11 11 LEU LEU A . n C 2 11 TYR 11 12 12 TYR TYR A . n C 2 12 ASP 12 13 13 ASP ASP A . n C 2 13 GLU 13 14 14 GLU GLU A . n C 2 14 ASN 14 15 15 ASN ASN A . n C 2 15 GLN 15 16 16 GLN GLN A . n C 2 16 LYS 16 17 17 LYS LYS A . n C 2 17 TYR 17 18 18 TYR TYR A . n C 2 18 ASP 18 19 19 ASP ASP A . n C 2 19 VAL 19 20 20 VAL VAL A . n C 2 20 CYS 20 21 21 CYS CYS A . n C 2 21 GLY 21 22 22 GLY GLY A . n C 2 22 ILE 22 23 23 ILE ILE A . n C 2 23 ILE 23 24 24 ILE ILE A . n C 2 24 SER 24 25 25 SER SER A . n C 2 25 ALA 25 26 26 ALA ALA A . n C 2 26 GLU 26 27 27 GLU GLU A . n C 2 27 GLY 27 28 28 GLY GLY A . n C 2 28 LYS 28 29 29 LYS LYS A . n C 2 29 ILE 29 30 30 ILE ILE A . n C 2 30 TYR 30 31 31 TYR TYR A . n C 2 31 PRO 31 32 32 PRO PRO A . n C 2 32 LEU 32 33 33 LEU LEU A . n C 2 33 GLY 33 34 34 GLY GLY A . n C 2 34 SER 34 35 35 SER SER A . n C 2 35 ASP 35 36 36 ASP ASP A . n C 2 36 THR 36 37 37 THR THR A . n C 2 37 LYS 37 38 38 LYS LYS A . n C 2 38 VAL 38 39 39 VAL VAL A . n C 2 39 LEU 39 40 40 LEU LEU A . n C 2 40 SER 40 41 41 SER SER A . n C 2 41 THR 41 42 42 THR THR A . n C 2 42 ILE 42 43 43 ILE ILE A . n C 2 43 PHE 43 44 44 PHE PHE A . n C 2 44 GLU 44 45 45 GLU GLU A . n C 2 45 LEU 45 46 46 LEU LEU A . n C 2 46 PHE 46 47 47 PHE PHE A . n C 2 47 SER 47 48 48 SER SER A . n C 2 48 ARG 48 49 49 ARG ARG A . n C 2 49 PRO 49 50 50 PRO PRO A . n C 2 50 ILE 50 51 51 ILE ILE A . n C 2 51 ILE 51 52 52 ILE ILE A . n C 2 52 ASN 52 53 53 ASN ASN A . n C 2 53 LYS 53 54 54 LYS LYS A . n C 2 54 ILE 54 55 55 ILE ILE A . n C 2 55 ALA 55 56 56 ALA ALA A . n C 2 56 GLU 56 57 57 GLU GLU A . n C 2 57 LYS 57 58 58 LYS LYS A . n C 2 58 HIS 58 59 59 HIS HIS A . n C 2 59 GLY 59 60 60 GLY GLY A . n C 2 60 TYR 60 61 61 TYR TYR A . n C 2 61 ILE 61 62 62 ILE ILE A . n C 2 62 VAL 62 63 63 VAL VAL A . n C 2 63 GLU 63 64 64 GLU GLU A . n C 2 64 GLU 64 65 65 GLU GLU A . n C 2 65 PRO 65 66 66 PRO PRO A . n C 2 66 LYS 66 67 67 LYS LYS A . n C 2 67 GLN 67 68 68 GLN GLN A . n C 2 68 GLN 68 69 69 GLN GLN A . n C 2 69 ASN 69 70 70 ASN ASN A . n C 2 70 HIS 70 71 71 HIS HIS A . n C 2 71 TYR 71 72 72 TYR TYR A . n C 2 72 PRO 72 73 73 PRO PRO A . n C 2 73 ASP 73 74 74 ASP ASP A . n C 2 74 PHE 74 75 75 PHE PHE A . n C 2 75 THR 75 76 76 THR THR A . n C 2 76 LEU 76 77 77 LEU LEU A . n C 2 77 TYR 77 78 78 TYR TYR A . n C 2 78 LYS 78 79 79 LYS LYS A . n C 2 79 PRO 79 80 80 PRO PRO A . n C 2 80 SER 80 81 81 SER SER A . n C 2 81 GLU 81 82 82 GLU GLU A . n C 2 82 PRO 82 83 83 PRO PRO A . n C 2 83 ASN 83 84 84 ASN ASN A . n C 2 84 LYS 84 85 85 LYS LYS A . n C 2 85 LYS 85 86 86 LYS LYS A . n C 2 86 ILE 86 87 87 ILE ILE A . n C 2 87 ALA 87 88 88 ALA ALA A . n C 2 88 ILE 88 89 89 ILE ILE A . n C 2 89 ASP 89 90 90 ASP ASP A . n C 2 90 ILE 90 91 91 ILE ILE A . n C 2 91 LYS 91 92 92 LYS LYS A . n C 2 92 THR 92 93 93 THR THR A . n C 2 93 THR 93 94 94 THR THR A . n C 2 94 TYR 94 95 95 TYR TYR A . n C 2 95 THR 95 96 96 THR THR A . n C 2 96 ASN 96 97 97 ASN ASN A . n C 2 97 LYS 97 98 98 LYS LYS A . n C 2 98 GLU 98 99 99 GLU GLU A . n C 2 99 ASN 99 100 100 ASN ASN A . n C 2 100 GLU 100 101 101 GLU GLU A . n C 2 101 LYS 101 102 102 LYS LYS A . n C 2 102 ILE 102 103 103 ILE ILE A . n C 2 103 LYS 103 104 104 LYS LYS A . n C 2 104 PHE 104 105 105 PHE PHE A . n C 2 105 THR 105 106 106 THR THR A . n C 2 106 LEU 106 107 107 LEU LEU A . n C 2 107 GLY 107 108 108 GLY GLY A . n C 2 108 GLY 108 109 109 GLY GLY A . n C 2 109 TYR 109 110 110 TYR TYR A . n C 2 110 THR 110 111 111 THR THR A . n C 2 111 SER 111 112 112 SER SER A . n C 2 112 PHE 112 113 113 PHE PHE A . n C 2 113 ILE 113 114 114 ILE ILE A . n C 2 114 ARG 114 115 115 ARG ARG A . n C 2 115 ASN 115 116 116 ASN ASN A . n C 2 116 ASN 116 117 117 ASN ASN A . n C 2 117 THR 117 118 118 THR THR A . n C 2 118 LYS 118 119 119 LYS LYS A . n C 2 119 ASN 119 120 120 ASN ASN A . n C 2 120 ILE 120 121 121 ILE ILE A . n C 2 121 VAL 121 122 122 VAL VAL A . n C 2 122 TYR 122 123 123 TYR TYR A . n C 2 123 PRO 123 124 124 PRO PRO A . n C 2 124 PHE 124 125 125 PHE PHE A . n C 2 125 ASP 125 126 126 ASP ASP A . n C 2 126 GLN 126 127 127 GLN GLN A . n C 2 127 TYR 127 128 128 TYR TYR A . n C 2 128 ILE 128 129 129 ILE ILE A . n C 2 129 ALA 129 130 130 ALA ALA A . n C 2 130 HIS 130 131 131 HIS HIS A . n C 2 131 TRP 131 132 132 TRP TRP A . n C 2 132 ILE 132 133 133 ILE ILE A . n C 2 133 ILE 133 134 134 ILE ILE A . n C 2 134 GLY 134 135 135 GLY GLY A . n C 2 135 TYR 135 136 136 TYR TYR A . n C 2 136 VAL 136 137 137 VAL VAL A . n C 2 137 TYR 137 138 138 TYR TYR A . n C 2 138 THR 138 139 139 THR THR A . n C 2 139 ARG 139 140 140 ARG ARG A . n C 2 140 VAL 140 141 141 VAL VAL A . n C 2 141 ALA 141 142 ? ? ? A . n C 2 142 THR 142 143 ? ? ? A . n C 2 143 ARG 143 144 ? ? ? A . n C 2 144 LYS 144 145 ? ? ? A . n C 2 145 SER 145 146 146 SER SER A . n C 2 146 SER 146 147 147 SER SER A . n C 2 147 LEU 147 148 148 LEU LEU A . n C 2 148 LYS 148 149 149 LYS LYS A . n C 2 149 THR 149 150 150 THR THR A . n C 2 150 TYR 150 151 151 TYR TYR A . n C 2 151 ASN 151 152 152 ASN ASN A . n C 2 152 ILE 152 153 153 ILE ILE A . n C 2 153 ASN 153 154 154 ASN ASN A . n C 2 154 GLU 154 155 155 GLU GLU A . n C 2 155 LEU 155 156 156 LEU LEU A . n C 2 156 ASN 156 157 157 ASN ASN A . n C 2 157 GLU 157 158 158 GLU GLU A . n C 2 158 ILE 158 159 159 ILE ILE A . n C 2 159 PRO 159 160 160 PRO PRO A . n C 2 160 LYS 160 161 161 LYS LYS A . n C 2 161 PRO 161 162 162 PRO PRO A . n C 2 162 TYR 162 163 163 TYR TYR A . n C 2 163 LYS 163 164 164 LYS LYS A . n C 2 164 GLY 164 165 165 GLY GLY A . n C 2 165 VAL 165 166 166 VAL VAL A . n C 2 166 LYS 166 167 167 LYS LYS A . n C 2 167 VAL 167 168 168 VAL VAL A . n C 2 168 PHE 168 169 169 PHE PHE A . n C 2 169 LEU 169 170 170 LEU LEU A . n C 2 170 GLN 170 171 171 GLN GLN A . n C 2 171 ASP 171 172 172 ASP ASP A . n C 2 172 LYS 172 173 173 LYS LYS A . n C 2 173 TRP 173 174 174 TRP TRP A . n C 2 174 VAL 174 175 175 VAL VAL A . n C 2 175 ILE 175 176 176 ILE ILE A . n C 2 176 ALA 176 177 177 ALA ALA A . n C 2 177 GLY 177 178 178 GLY GLY A . n C 2 178 ASP 178 179 179 ASP ASP A . n C 2 179 LEU 179 180 180 LEU LEU A . n C 2 180 ALA 180 181 181 ALA ALA A . n C 2 181 GLY 181 182 182 GLY GLY A . n C 2 182 SER 182 183 183 SER SER A . n C 2 183 GLY 183 184 184 GLY GLY A . n C 2 184 ASN 184 185 185 ASN ASN A . n C 2 185 THR 185 186 186 THR THR A . n C 2 186 THR 186 187 187 THR THR A . n C 2 187 ASN 187 188 188 ASN ASN A . n C 2 188 ILE 188 189 189 ILE ILE A . n C 2 189 GLY 189 190 190 GLY GLY A . n C 2 190 SER 190 191 191 SER SER A . n C 2 191 ILE 191 192 192 ILE ILE A . n C 2 192 HIS 192 193 193 HIS HIS A . n C 2 193 ALA 193 194 194 ALA ALA A . n C 2 194 HIS 194 195 195 HIS HIS A . n C 2 195 TYR 195 196 196 TYR TYR A . n C 2 196 LYS 196 197 197 LYS LYS A . n C 2 197 ASP 197 198 198 ASP ASP A . n C 2 198 PHE 198 199 199 PHE PHE A . n C 2 199 VAL 199 200 200 VAL VAL A . n C 2 200 GLU 200 201 201 GLU GLU A . n C 2 201 GLY 201 202 202 GLY GLY A . n C 2 202 LYS 202 203 203 LYS LYS A . n C 2 203 GLY 203 204 204 GLY GLY A . n C 2 204 ILE 204 205 205 ILE ILE A . n C 2 205 PHE 205 206 206 PHE PHE A . n C 2 206 ASP 206 207 207 ASP ASP A . n C 2 207 SER 207 208 208 SER SER A . n C 2 208 GLU 208 209 209 GLU GLU A . n C 2 209 ASP 209 210 210 ASP ASP A . n C 2 210 GLU 210 211 211 GLU GLU A . n C 2 211 PHE 211 212 212 PHE PHE A . n C 2 212 LEU 212 213 213 LEU LEU A . n C 2 213 ASP 213 214 214 ASP ASP A . n C 2 214 TYR 214 215 215 TYR TYR A . n C 2 215 TRP 215 216 216 TRP TRP A . n C 2 216 ARG 216 217 217 ARG ARG A . n C 2 217 ASN 217 218 218 ASN ASN A . n C 2 218 TYR 218 219 219 TYR TYR A . n C 2 219 GLU 219 220 220 GLU GLU A . n C 2 220 ARG 220 221 221 ARG ARG A . n C 2 221 THR 221 222 222 THR THR A . n C 2 222 SER 222 223 223 SER SER A . n C 2 223 GLN 223 224 224 GLN GLN A . n C 2 224 LEU 224 225 225 LEU LEU A . n C 2 225 ARG 225 226 226 ARG ARG A . n C 2 226 ASN 226 227 227 ASN ASN A . n C 2 227 ASP 227 228 228 ASP ASP A . n C 2 228 LYS 228 229 229 LYS LYS A . n C 2 229 TYR 229 230 230 TYR TYR A . n C 2 230 ASN 230 231 231 ASN ASN A . n C 2 231 ASN 231 232 232 ASN ASN A . n C 2 232 ILE 232 233 233 ILE ILE A . n C 2 233 SER 233 234 234 SER SER A . n C 2 234 GLU 234 235 235 GLU GLU A . n C 2 235 TYR 235 236 236 TYR TYR A . n C 2 236 ARG 236 237 237 ARG ARG A . n C 2 237 ASN 237 238 238 ASN ASN A . n C 2 238 TRP 238 239 239 TRP TRP A . n C 2 239 ILE 239 240 240 ILE ILE A . n C 2 240 TYR 240 241 241 TYR TYR A . n C 2 241 ARG 241 242 242 ARG ARG A . n C 2 242 GLY 242 243 243 GLY GLY A . n C 2 243 ARG 243 244 244 ARG ARG A . n C 2 244 LYS 244 245 245 LYS LYS A . n D 2 1 SER 1 2 2 SER SER B . n D 2 2 LEU 2 3 3 LEU LEU B . n D 2 3 ARG 3 4 4 ARG ARG B . n D 2 4 SER 4 5 5 SER SER B . n D 2 5 ASP 5 6 6 ASP ASP B . n D 2 6 LEU 6 7 7 LEU LEU B . n D 2 7 ILE 7 8 8 ILE ILE B . n D 2 8 ASN 8 9 9 ASN ASN B . n D 2 9 ALA 9 10 10 ALA ALA B . n D 2 10 LEU 10 11 11 LEU LEU B . n D 2 11 TYR 11 12 ? ? ? B . n D 2 12 ASP 12 13 ? ? ? B . n D 2 13 GLU 13 14 ? ? ? B . n D 2 14 ASN 14 15 ? ? ? B . n D 2 15 GLN 15 16 ? ? ? B . n D 2 16 LYS 16 17 ? ? ? B . n D 2 17 TYR 17 18 ? ? ? B . n D 2 18 ASP 18 19 19 ASP ASP B . n D 2 19 VAL 19 20 20 VAL VAL B . n D 2 20 CYS 20 21 21 CYS CYS B . n D 2 21 GLY 21 22 22 GLY GLY B . n D 2 22 ILE 22 23 23 ILE ILE B . n D 2 23 ILE 23 24 24 ILE ILE B . n D 2 24 SER 24 25 25 SER SER B . n D 2 25 ALA 25 26 26 ALA ALA B . n D 2 26 GLU 26 27 27 GLU GLU B . n D 2 27 GLY 27 28 28 GLY GLY B . n D 2 28 LYS 28 29 29 LYS LYS B . n D 2 29 ILE 29 30 30 ILE ILE B . n D 2 30 TYR 30 31 31 TYR TYR B . n D 2 31 PRO 31 32 32 PRO PRO B . n D 2 32 LEU 32 33 33 LEU LEU B . n D 2 33 GLY 33 34 34 GLY GLY B . n D 2 34 SER 34 35 35 SER SER B . n D 2 35 ASP 35 36 36 ASP ASP B . n D 2 36 THR 36 37 37 THR THR B . n D 2 37 LYS 37 38 38 LYS LYS B . n D 2 38 VAL 38 39 39 VAL VAL B . n D 2 39 LEU 39 40 40 LEU LEU B . n D 2 40 SER 40 41 41 SER SER B . n D 2 41 THR 41 42 42 THR THR B . n D 2 42 ILE 42 43 43 ILE ILE B . n D 2 43 PHE 43 44 44 PHE PHE B . n D 2 44 GLU 44 45 45 GLU GLU B . n D 2 45 LEU 45 46 46 LEU LEU B . n D 2 46 PHE 46 47 47 PHE PHE B . n D 2 47 SER 47 48 48 SER SER B . n D 2 48 ARG 48 49 49 ARG ARG B . n D 2 49 PRO 49 50 50 PRO PRO B . n D 2 50 ILE 50 51 51 ILE ILE B . n D 2 51 ILE 51 52 52 ILE ILE B . n D 2 52 ASN 52 53 53 ASN ASN B . n D 2 53 LYS 53 54 54 LYS LYS B . n D 2 54 ILE 54 55 55 ILE ILE B . n D 2 55 ALA 55 56 56 ALA ALA B . n D 2 56 GLU 56 57 57 GLU GLU B . n D 2 57 LYS 57 58 58 LYS LYS B . n D 2 58 HIS 58 59 59 HIS HIS B . n D 2 59 GLY 59 60 60 GLY GLY B . n D 2 60 TYR 60 61 61 TYR TYR B . n D 2 61 ILE 61 62 62 ILE ILE B . n D 2 62 VAL 62 63 63 VAL VAL B . n D 2 63 GLU 63 64 64 GLU GLU B . n D 2 64 GLU 64 65 65 GLU GLU B . n D 2 65 PRO 65 66 66 PRO PRO B . n D 2 66 LYS 66 67 67 LYS LYS B . n D 2 67 GLN 67 68 68 GLN GLN B . n D 2 68 GLN 68 69 69 GLN GLN B . n D 2 69 ASN 69 70 70 ASN ASN B . n D 2 70 HIS 70 71 71 HIS HIS B . n D 2 71 TYR 71 72 72 TYR TYR B . n D 2 72 PRO 72 73 73 PRO PRO B . n D 2 73 ASP 73 74 74 ASP ASP B . n D 2 74 PHE 74 75 75 PHE PHE B . n D 2 75 THR 75 76 76 THR THR B . n D 2 76 LEU 76 77 77 LEU LEU B . n D 2 77 TYR 77 78 78 TYR TYR B . n D 2 78 LYS 78 79 79 LYS LYS B . n D 2 79 PRO 79 80 80 PRO PRO B . n D 2 80 SER 80 81 81 SER SER B . n D 2 81 GLU 81 82 82 GLU GLU B . n D 2 82 PRO 82 83 83 PRO PRO B . n D 2 83 ASN 83 84 84 ASN ASN B . n D 2 84 LYS 84 85 85 LYS LYS B . n D 2 85 LYS 85 86 86 LYS LYS B . n D 2 86 ILE 86 87 87 ILE ILE B . n D 2 87 ALA 87 88 88 ALA ALA B . n D 2 88 ILE 88 89 89 ILE ILE B . n D 2 89 ASP 89 90 90 ASP ASP B . n D 2 90 ILE 90 91 91 ILE ILE B . n D 2 91 LYS 91 92 92 LYS LYS B . n D 2 92 THR 92 93 93 THR THR B . n D 2 93 THR 93 94 94 THR THR B . n D 2 94 TYR 94 95 95 TYR TYR B . n D 2 95 THR 95 96 96 THR THR B . n D 2 96 ASN 96 97 97 ASN ASN B . n D 2 97 LYS 97 98 ? ? ? B . n D 2 98 GLU 98 99 ? ? ? B . n D 2 99 ASN 99 100 ? ? ? B . n D 2 100 GLU 100 101 ? ? ? B . n D 2 101 LYS 101 102 102 LYS LYS B . n D 2 102 ILE 102 103 103 ILE ILE B . n D 2 103 LYS 103 104 104 LYS LYS B . n D 2 104 PHE 104 105 105 PHE PHE B . n D 2 105 THR 105 106 106 THR THR B . n D 2 106 LEU 106 107 107 LEU LEU B . n D 2 107 GLY 107 108 108 GLY GLY B . n D 2 108 GLY 108 109 109 GLY GLY B . n D 2 109 TYR 109 110 110 TYR TYR B . n D 2 110 THR 110 111 111 THR THR B . n D 2 111 SER 111 112 112 SER SER B . n D 2 112 PHE 112 113 113 PHE PHE B . n D 2 113 ILE 113 114 114 ILE ILE B . n D 2 114 ARG 114 115 115 ARG ARG B . n D 2 115 ASN 115 116 116 ASN ASN B . n D 2 116 ASN 116 117 117 ASN ASN B . n D 2 117 THR 117 118 118 THR THR B . n D 2 118 LYS 118 119 119 LYS LYS B . n D 2 119 ASN 119 120 120 ASN ASN B . n D 2 120 ILE 120 121 121 ILE ILE B . n D 2 121 VAL 121 122 122 VAL VAL B . n D 2 122 TYR 122 123 123 TYR TYR B . n D 2 123 PRO 123 124 124 PRO PRO B . n D 2 124 PHE 124 125 125 PHE PHE B . n D 2 125 ASP 125 126 126 ASP ASP B . n D 2 126 GLN 126 127 127 GLN GLN B . n D 2 127 TYR 127 128 128 TYR TYR B . n D 2 128 ILE 128 129 129 ILE ILE B . n D 2 129 ALA 129 130 130 ALA ALA B . n D 2 130 HIS 130 131 131 HIS HIS B . n D 2 131 TRP 131 132 132 TRP TRP B . n D 2 132 ILE 132 133 133 ILE ILE B . n D 2 133 ILE 133 134 134 ILE ILE B . n D 2 134 GLY 134 135 135 GLY GLY B . n D 2 135 TYR 135 136 136 TYR TYR B . n D 2 136 VAL 136 137 137 VAL VAL B . n D 2 137 TYR 137 138 138 TYR TYR B . n D 2 138 THR 138 139 139 THR THR B . n D 2 139 ARG 139 140 140 ARG ARG B . n D 2 140 VAL 140 141 141 VAL VAL B . n D 2 141 ALA 141 142 ? ? ? B . n D 2 142 THR 142 143 ? ? ? B . n D 2 143 ARG 143 144 ? ? ? B . n D 2 144 LYS 144 145 ? ? ? B . n D 2 145 SER 145 146 ? ? ? B . n D 2 146 SER 146 147 ? ? ? B . n D 2 147 LEU 147 148 148 LEU LEU B . n D 2 148 LYS 148 149 149 LYS LYS B . n D 2 149 THR 149 150 150 THR THR B . n D 2 150 TYR 150 151 151 TYR TYR B . n D 2 151 ASN 151 152 152 ASN ASN B . n D 2 152 ILE 152 153 153 ILE ILE B . n D 2 153 ASN 153 154 154 ASN ASN B . n D 2 154 GLU 154 155 155 GLU GLU B . n D 2 155 LEU 155 156 156 LEU LEU B . n D 2 156 ASN 156 157 157 ASN ASN B . n D 2 157 GLU 157 158 158 GLU GLU B . n D 2 158 ILE 158 159 159 ILE ILE B . n D 2 159 PRO 159 160 160 PRO PRO B . n D 2 160 LYS 160 161 161 LYS LYS B . n D 2 161 PRO 161 162 162 PRO PRO B . n D 2 162 TYR 162 163 163 TYR TYR B . n D 2 163 LYS 163 164 164 LYS LYS B . n D 2 164 GLY 164 165 165 GLY GLY B . n D 2 165 VAL 165 166 166 VAL VAL B . n D 2 166 LYS 166 167 167 LYS LYS B . n D 2 167 VAL 167 168 168 VAL VAL B . n D 2 168 PHE 168 169 169 PHE PHE B . n D 2 169 LEU 169 170 170 LEU LEU B . n D 2 170 GLN 170 171 171 GLN GLN B . n D 2 171 ASP 171 172 172 ASP ASP B . n D 2 172 LYS 172 173 173 LYS LYS B . n D 2 173 TRP 173 174 174 TRP TRP B . n D 2 174 VAL 174 175 175 VAL VAL B . n D 2 175 ILE 175 176 176 ILE ILE B . n D 2 176 ALA 176 177 177 ALA ALA B . n D 2 177 GLY 177 178 178 GLY GLY B . n D 2 178 ASP 178 179 179 ASP ASP B . n D 2 179 LEU 179 180 180 LEU LEU B . n D 2 180 ALA 180 181 181 ALA ALA B . n D 2 181 GLY 181 182 182 GLY GLY B . n D 2 182 SER 182 183 183 SER SER B . n D 2 183 GLY 183 184 184 GLY GLY B . n D 2 184 ASN 184 185 185 ASN ASN B . n D 2 185 THR 185 186 186 THR THR B . n D 2 186 THR 186 187 187 THR THR B . n D 2 187 ASN 187 188 188 ASN ASN B . n D 2 188 ILE 188 189 189 ILE ILE B . n D 2 189 GLY 189 190 190 GLY GLY B . n D 2 190 SER 190 191 191 SER SER B . n D 2 191 ILE 191 192 192 ILE ILE B . n D 2 192 HIS 192 193 193 HIS HIS B . n D 2 193 ALA 193 194 194 ALA ALA B . n D 2 194 HIS 194 195 195 HIS HIS B . n D 2 195 TYR 195 196 196 TYR TYR B . n D 2 196 LYS 196 197 197 LYS LYS B . n D 2 197 ASP 197 198 198 ASP ASP B . n D 2 198 PHE 198 199 199 PHE PHE B . n D 2 199 VAL 199 200 200 VAL VAL B . n D 2 200 GLU 200 201 201 GLU GLU B . n D 2 201 GLY 201 202 202 GLY GLY B . n D 2 202 LYS 202 203 203 LYS LYS B . n D 2 203 GLY 203 204 204 GLY GLY B . n D 2 204 ILE 204 205 205 ILE ILE B . n D 2 205 PHE 205 206 206 PHE PHE B . n D 2 206 ASP 206 207 207 ASP ASP B . n D 2 207 SER 207 208 208 SER SER B . n D 2 208 GLU 208 209 209 GLU GLU B . n D 2 209 ASP 209 210 210 ASP ASP B . n D 2 210 GLU 210 211 211 GLU GLU B . n D 2 211 PHE 211 212 212 PHE PHE B . n D 2 212 LEU 212 213 213 LEU LEU B . n D 2 213 ASP 213 214 214 ASP ASP B . n D 2 214 TYR 214 215 215 TYR TYR B . n D 2 215 TRP 215 216 216 TRP TRP B . n D 2 216 ARG 216 217 217 ARG ARG B . n D 2 217 ASN 217 218 218 ASN ASN B . n D 2 218 TYR 218 219 219 TYR TYR B . n D 2 219 GLU 219 220 220 GLU GLU B . n D 2 220 ARG 220 221 221 ARG ARG B . n D 2 221 THR 221 222 222 THR THR B . n D 2 222 SER 222 223 223 SER SER B . n D 2 223 GLN 223 224 224 GLN GLN B . n D 2 224 LEU 224 225 225 LEU LEU B . n D 2 225 ARG 225 226 226 ARG ARG B . n D 2 226 ASN 226 227 227 ASN ASN B . n D 2 227 ASP 227 228 228 ASP ASP B . n D 2 228 LYS 228 229 229 LYS LYS B . n D 2 229 TYR 229 230 230 TYR TYR B . n D 2 230 ASN 230 231 231 ASN ASN B . n D 2 231 ASN 231 232 232 ASN ASN B . n D 2 232 ILE 232 233 233 ILE ILE B . n D 2 233 SER 233 234 234 SER SER B . n D 2 234 GLU 234 235 235 GLU GLU B . n D 2 235 TYR 235 236 236 TYR TYR B . n D 2 236 ARG 236 237 237 ARG ARG B . n D 2 237 ASN 237 238 238 ASN ASN B . n D 2 238 TRP 238 239 239 TRP TRP B . n D 2 239 ILE 239 240 240 ILE ILE B . n D 2 240 TYR 240 241 241 TYR TYR B . n D 2 241 ARG 241 242 242 ARG ARG B . n D 2 242 GLY 242 243 243 GLY GLY B . n D 2 243 ARG 243 244 244 ARG ARG B . n D 2 244 LYS 244 245 245 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 13 13 HOH HOH C . E 3 HOH 2 16 16 HOH HOH C . E 3 HOH 3 19 19 HOH HOH C . E 3 HOH 4 21 21 HOH HOH C . E 3 HOH 5 49 49 HOH HOH C . E 3 HOH 6 79 79 HOH HOH C . E 3 HOH 7 91 91 HOH HOH C . E 3 HOH 8 94 94 HOH HOH C . E 3 HOH 9 135 135 HOH HOH C . E 3 HOH 10 140 140 HOH HOH C . E 3 HOH 11 141 141 HOH HOH C . E 3 HOH 12 149 149 HOH HOH C . F 3 HOH 1 40 40 HOH HOH D . F 3 HOH 2 57 57 HOH HOH D . F 3 HOH 3 59 59 HOH HOH D . F 3 HOH 4 101 101 HOH HOH D . F 3 HOH 5 108 108 HOH HOH D . F 3 HOH 6 114 114 HOH HOH D . F 3 HOH 7 125 125 HOH HOH D . F 3 HOH 8 128 128 HOH HOH D . F 3 HOH 9 136 136 HOH HOH D . F 3 HOH 10 137 137 HOH HOH D . F 3 HOH 11 138 138 HOH HOH D . F 3 HOH 12 142 142 HOH HOH D . F 3 HOH 13 178 178 HOH HOH D . G 3 HOH 1 246 1 HOH HOH A . G 3 HOH 2 247 3 HOH HOH A . G 3 HOH 3 248 7 HOH HOH A . G 3 HOH 4 249 8 HOH HOH A . G 3 HOH 5 250 10 HOH HOH A . G 3 HOH 6 251 11 HOH HOH A . G 3 HOH 7 252 12 HOH HOH A . G 3 HOH 8 253 14 HOH HOH A . G 3 HOH 9 254 15 HOH HOH A . G 3 HOH 10 255 17 HOH HOH A . G 3 HOH 11 256 20 HOH HOH A . G 3 HOH 12 257 22 HOH HOH A . G 3 HOH 13 258 23 HOH HOH A . G 3 HOH 14 259 25 HOH HOH A . G 3 HOH 15 260 26 HOH HOH A . G 3 HOH 16 261 27 HOH HOH A . G 3 HOH 17 262 28 HOH HOH A . G 3 HOH 18 263 29 HOH HOH A . G 3 HOH 19 264 30 HOH HOH A . G 3 HOH 20 265 31 HOH HOH A . G 3 HOH 21 266 32 HOH HOH A . G 3 HOH 22 267 33 HOH HOH A . G 3 HOH 23 268 34 HOH HOH A . G 3 HOH 24 269 35 HOH HOH A . G 3 HOH 25 270 36 HOH HOH A . G 3 HOH 26 271 37 HOH HOH A . G 3 HOH 27 272 38 HOH HOH A . G 3 HOH 28 273 39 HOH HOH A . G 3 HOH 29 274 41 HOH HOH A . G 3 HOH 30 275 60 HOH HOH A . G 3 HOH 31 276 87 HOH HOH A . G 3 HOH 32 277 93 HOH HOH A . G 3 HOH 33 278 98 HOH HOH A . G 3 HOH 34 279 99 HOH HOH A . G 3 HOH 35 280 102 HOH HOH A . G 3 HOH 36 281 103 HOH HOH A . G 3 HOH 37 282 104 HOH HOH A . G 3 HOH 38 283 105 HOH HOH A . G 3 HOH 39 284 106 HOH HOH A . G 3 HOH 40 285 107 HOH HOH A . G 3 HOH 41 286 109 HOH HOH A . G 3 HOH 42 287 110 HOH HOH A . G 3 HOH 43 288 111 HOH HOH A . G 3 HOH 44 289 112 HOH HOH A . G 3 HOH 45 290 113 HOH HOH A . G 3 HOH 46 291 115 HOH HOH A . G 3 HOH 47 292 116 HOH HOH A . G 3 HOH 48 293 117 HOH HOH A . G 3 HOH 49 294 118 HOH HOH A . G 3 HOH 50 295 119 HOH HOH A . G 3 HOH 51 296 120 HOH HOH A . G 3 HOH 52 297 133 HOH HOH A . G 3 HOH 53 298 143 HOH HOH A . G 3 HOH 54 299 144 HOH HOH A . G 3 HOH 55 300 145 HOH HOH A . G 3 HOH 56 301 146 HOH HOH A . G 3 HOH 57 302 147 HOH HOH A . G 3 HOH 58 303 148 HOH HOH A . G 3 HOH 59 304 150 HOH HOH A . G 3 HOH 60 305 151 HOH HOH A . G 3 HOH 61 306 154 HOH HOH A . G 3 HOH 62 307 155 HOH HOH A . G 3 HOH 63 308 156 HOH HOH A . G 3 HOH 64 309 157 HOH HOH A . G 3 HOH 65 310 158 HOH HOH A . G 3 HOH 66 311 159 HOH HOH A . G 3 HOH 67 312 160 HOH HOH A . G 3 HOH 68 313 161 HOH HOH A . G 3 HOH 69 314 162 HOH HOH A . G 3 HOH 70 315 163 HOH HOH A . G 3 HOH 71 316 164 HOH HOH A . G 3 HOH 72 317 165 HOH HOH A . G 3 HOH 73 318 166 HOH HOH A . G 3 HOH 74 319 167 HOH HOH A . G 3 HOH 75 320 168 HOH HOH A . G 3 HOH 76 321 169 HOH HOH A . G 3 HOH 77 322 170 HOH HOH A . H 3 HOH 1 246 4 HOH HOH B . H 3 HOH 2 247 6 HOH HOH B . H 3 HOH 3 248 9 HOH HOH B . H 3 HOH 4 249 24 HOH HOH B . H 3 HOH 5 250 43 HOH HOH B . H 3 HOH 6 251 44 HOH HOH B . H 3 HOH 7 252 45 HOH HOH B . H 3 HOH 8 253 46 HOH HOH B . H 3 HOH 9 254 47 HOH HOH B . H 3 HOH 10 255 48 HOH HOH B . H 3 HOH 11 256 50 HOH HOH B . H 3 HOH 12 257 51 HOH HOH B . H 3 HOH 13 258 52 HOH HOH B . H 3 HOH 14 259 53 HOH HOH B . H 3 HOH 15 260 54 HOH HOH B . H 3 HOH 16 261 56 HOH HOH B . H 3 HOH 17 262 58 HOH HOH B . H 3 HOH 18 263 61 HOH HOH B . H 3 HOH 19 264 62 HOH HOH B . H 3 HOH 20 265 63 HOH HOH B . H 3 HOH 21 266 64 HOH HOH B . H 3 HOH 22 267 65 HOH HOH B . H 3 HOH 23 268 66 HOH HOH B . H 3 HOH 24 269 67 HOH HOH B . H 3 HOH 25 270 68 HOH HOH B . H 3 HOH 26 271 69 HOH HOH B . H 3 HOH 27 272 70 HOH HOH B . H 3 HOH 28 273 71 HOH HOH B . H 3 HOH 29 274 72 HOH HOH B . H 3 HOH 30 275 73 HOH HOH B . H 3 HOH 31 276 74 HOH HOH B . H 3 HOH 32 277 75 HOH HOH B . H 3 HOH 33 278 76 HOH HOH B . H 3 HOH 34 279 77 HOH HOH B . H 3 HOH 35 280 78 HOH HOH B . H 3 HOH 36 281 80 HOH HOH B . H 3 HOH 37 282 82 HOH HOH B . H 3 HOH 38 283 83 HOH HOH B . H 3 HOH 39 284 84 HOH HOH B . H 3 HOH 40 285 86 HOH HOH B . H 3 HOH 41 286 88 HOH HOH B . H 3 HOH 42 287 89 HOH HOH B . H 3 HOH 43 288 90 HOH HOH B . H 3 HOH 44 289 122 HOH HOH B . H 3 HOH 45 290 123 HOH HOH B . H 3 HOH 46 291 124 HOH HOH B . H 3 HOH 47 292 126 HOH HOH B . H 3 HOH 48 293 127 HOH HOH B . H 3 HOH 49 294 129 HOH HOH B . H 3 HOH 50 295 130 HOH HOH B . H 3 HOH 51 296 131 HOH HOH B . H 3 HOH 52 297 132 HOH HOH B . H 3 HOH 53 298 139 HOH HOH B . H 3 HOH 54 299 152 HOH HOH B . H 3 HOH 55 300 153 HOH HOH B . H 3 HOH 56 301 171 HOH HOH B . H 3 HOH 57 302 172 HOH HOH B . H 3 HOH 58 303 173 HOH HOH B . H 3 HOH 59 304 174 HOH HOH B . H 3 HOH 60 305 175 HOH HOH B . H 3 HOH 61 306 176 HOH HOH B . H 3 HOH 62 307 177 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-11-11 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ1 B LYS 173 ? ? H1 B HOH 274 ? ? 1.21 2 1 HZ2 B LYS 86 ? ? H1 B HOH 258 ? ? 1.28 3 1 H3 C DT 11 ? ? N1 D DA 2 ? ? 1.42 4 1 OP2 D DT 6 ? ? H2 D HOH 59 ? ? 1.48 5 1 OP2 C DT 11 ? ? H1 C HOH 135 ? ? 1.52 6 1 "O3'" D DT 6 ? ? H1 D HOH 138 ? ? 1.55 7 1 "O4'" C DC 9 ? ? H1 C HOH 49 ? ? 1.55 8 1 OP2 C DG 4 ? ? H1 C HOH 79 ? ? 1.55 9 1 O4 C DT 11 ? ? H62 D DA 2 ? ? 1.57 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 110.97 108.30 2.67 0.30 N 2 1 "O4'" D DT 8 ? ? "C1'" D DT 8 ? ? N1 D DT 8 ? ? 110.17 108.30 1.87 0.30 N 3 1 "O4'" D DC 9 ? ? "C1'" D DC 9 ? ? N1 D DC 9 ? ? 110.40 108.30 2.10 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 35 ? ? -108.56 41.07 2 1 ASN A 70 ? ? 101.00 23.66 3 1 ASN A 84 ? ? -67.67 13.20 4 1 ASN A 100 ? ? 90.90 -46.44 5 1 SER A 112 ? ? -103.65 -112.56 6 1 ASN A 117 ? ? -44.33 -19.44 7 1 SER A 147 ? ? -67.96 3.94 8 1 ASN A 154 ? ? -67.29 0.10 9 1 THR A 187 ? ? 31.76 62.93 10 1 ALA A 194 ? ? -165.02 -169.68 11 1 LYS A 229 ? ? -118.87 -104.46 12 1 SER B 112 ? ? -95.34 -122.89 13 1 ASN B 117 ? ? -27.88 -32.53 14 1 THR B 187 ? ? 26.32 74.27 15 1 LYS B 229 ? ? -112.07 -89.22 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA C 2 ? ? 0.055 'SIDE CHAIN' 2 1 DA C 5 ? ? 0.066 'SIDE CHAIN' 3 1 DA C 7 ? ? 0.067 'SIDE CHAIN' 4 1 TYR B 95 ? ? 0.113 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DA 7 ? P ? A DA 7 P 2 1 Y 1 C DA 7 ? OP1 ? A DA 7 OP1 3 1 Y 1 C DA 7 ? OP2 ? A DA 7 OP2 4 1 Y 1 D DA 7 ? P ? B DA 7 P 5 1 Y 1 D DA 7 ? OP1 ? B DA 7 OP1 6 1 Y 1 D DA 7 ? OP2 ? B DA 7 OP2 7 1 Y 1 A LYS 17 ? CG ? C LYS 16 CG 8 1 Y 1 A LYS 17 ? CD ? C LYS 16 CD 9 1 Y 1 A LYS 17 ? CE ? C LYS 16 CE 10 1 Y 1 A LYS 17 ? NZ ? C LYS 16 NZ 11 1 Y 1 A LYS 29 ? CD ? C LYS 28 CD 12 1 Y 1 A LYS 29 ? CE ? C LYS 28 CE 13 1 Y 1 A LYS 29 ? NZ ? C LYS 28 NZ 14 1 Y 1 A LYS 38 ? CG ? C LYS 37 CG 15 1 Y 1 A LYS 38 ? CD ? C LYS 37 CD 16 1 Y 1 A LYS 38 ? CE ? C LYS 37 CE 17 1 Y 1 A LYS 38 ? NZ ? C LYS 37 NZ 18 1 Y 1 A LYS 54 ? CG ? C LYS 53 CG 19 1 Y 1 A LYS 54 ? CD ? C LYS 53 CD 20 1 Y 1 A LYS 54 ? CE ? C LYS 53 CE 21 1 Y 1 A LYS 54 ? NZ ? C LYS 53 NZ 22 1 Y 1 A LYS 67 ? CG ? C LYS 66 CG 23 1 Y 1 A LYS 67 ? CD ? C LYS 66 CD 24 1 Y 1 A LYS 67 ? CE ? C LYS 66 CE 25 1 Y 1 A LYS 67 ? NZ ? C LYS 66 NZ 26 1 Y 1 A ASN 70 ? CG ? C ASN 69 CG 27 1 Y 1 A ASN 70 ? OD1 ? C ASN 69 OD1 28 1 Y 1 A ASN 70 ? ND2 ? C ASN 69 ND2 29 1 Y 1 A GLU 82 ? CG ? C GLU 81 CG 30 1 Y 1 A GLU 82 ? CD ? C GLU 81 CD 31 1 Y 1 A GLU 82 ? OE1 ? C GLU 81 OE1 32 1 Y 1 A GLU 82 ? OE2 ? C GLU 81 OE2 33 1 Y 1 A LYS 85 ? CD ? C LYS 84 CD 34 1 Y 1 A LYS 85 ? CE ? C LYS 84 CE 35 1 Y 1 A LYS 85 ? NZ ? C LYS 84 NZ 36 1 Y 1 A LYS 98 ? CG ? C LYS 97 CG 37 1 Y 1 A LYS 98 ? CD ? C LYS 97 CD 38 1 Y 1 A LYS 98 ? CE ? C LYS 97 CE 39 1 Y 1 A LYS 98 ? NZ ? C LYS 97 NZ 40 1 Y 1 A GLU 99 ? CG ? C GLU 98 CG 41 1 Y 1 A GLU 99 ? CD ? C GLU 98 CD 42 1 Y 1 A GLU 99 ? OE1 ? C GLU 98 OE1 43 1 Y 1 A GLU 99 ? OE2 ? C GLU 98 OE2 44 1 Y 1 A ASN 100 ? CG ? C ASN 99 CG 45 1 Y 1 A ASN 100 ? OD1 ? C ASN 99 OD1 46 1 Y 1 A ASN 100 ? ND2 ? C ASN 99 ND2 47 1 Y 1 A LEU 148 ? CG ? C LEU 147 CG 48 1 Y 1 A LEU 148 ? CD1 ? C LEU 147 CD1 49 1 Y 1 A LEU 148 ? CD2 ? C LEU 147 CD2 50 1 Y 1 A LYS 149 ? CD ? C LYS 148 CD 51 1 Y 1 A LYS 149 ? CE ? C LYS 148 CE 52 1 Y 1 A LYS 149 ? NZ ? C LYS 148 NZ 53 1 Y 1 A LYS 197 ? CG ? C LYS 196 CG 54 1 Y 1 A LYS 197 ? CD ? C LYS 196 CD 55 1 Y 1 A LYS 197 ? CE ? C LYS 196 CE 56 1 Y 1 A LYS 197 ? NZ ? C LYS 196 NZ 57 1 Y 1 B LYS 38 ? CG ? D LYS 37 CG 58 1 Y 1 B LYS 38 ? CD ? D LYS 37 CD 59 1 Y 1 B LYS 38 ? CE ? D LYS 37 CE 60 1 Y 1 B LYS 38 ? NZ ? D LYS 37 NZ 61 1 Y 1 B GLU 57 ? CG ? D GLU 56 CG 62 1 Y 1 B GLU 57 ? CD ? D GLU 56 CD 63 1 Y 1 B GLU 57 ? OE1 ? D GLU 56 OE1 64 1 Y 1 B GLU 57 ? OE2 ? D GLU 56 OE2 65 1 Y 1 B LYS 119 ? CG ? D LYS 118 CG 66 1 Y 1 B LYS 119 ? CD ? D LYS 118 CD 67 1 Y 1 B LYS 119 ? CE ? D LYS 118 CE 68 1 Y 1 B LYS 119 ? NZ ? D LYS 118 NZ 69 1 Y 1 B ARG 140 ? CG ? D ARG 139 CG 70 1 Y 1 B ARG 140 ? CD ? D ARG 139 CD 71 1 Y 1 B ARG 140 ? NE ? D ARG 139 NE 72 1 Y 1 B ARG 140 ? CZ ? D ARG 139 CZ 73 1 Y 1 B ARG 140 ? NH1 ? D ARG 139 NH1 74 1 Y 1 B ARG 140 ? NH2 ? D ARG 139 NH2 75 1 Y 1 B LYS 203 ? CG ? D LYS 202 CG 76 1 Y 1 B LYS 203 ? CD ? D LYS 202 CD 77 1 Y 1 B LYS 203 ? CE ? D LYS 202 CE 78 1 Y 1 B LYS 203 ? NZ ? D LYS 202 NZ 79 1 Y 1 B LYS 245 ? CG ? D LYS 244 CG 80 1 Y 1 B LYS 245 ? CD ? D LYS 244 CD 81 1 Y 1 B LYS 245 ? CE ? D LYS 244 CE 82 1 Y 1 B LYS 245 ? NZ ? D LYS 244 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 142 ? C ALA 141 2 1 Y 1 A THR 143 ? C THR 142 3 1 Y 1 A ARG 144 ? C ARG 143 4 1 Y 1 A LYS 145 ? C LYS 144 5 1 Y 1 B TYR 12 ? D TYR 11 6 1 Y 1 B ASP 13 ? D ASP 12 7 1 Y 1 B GLU 14 ? D GLU 13 8 1 Y 1 B ASN 15 ? D ASN 14 9 1 Y 1 B GLN 16 ? D GLN 15 10 1 Y 1 B LYS 17 ? D LYS 16 11 1 Y 1 B TYR 18 ? D TYR 17 12 1 Y 1 B LYS 98 ? D LYS 97 13 1 Y 1 B GLU 99 ? D GLU 98 14 1 Y 1 B ASN 100 ? D ASN 99 15 1 Y 1 B GLU 101 ? D GLU 100 16 1 Y 1 B ALA 142 ? D ALA 141 17 1 Y 1 B THR 143 ? D THR 142 18 1 Y 1 B ARG 144 ? D ARG 143 19 1 Y 1 B LYS 145 ? D LYS 144 20 1 Y 1 B SER 146 ? D SER 145 21 1 Y 1 B SER 147 ? D SER 146 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RV5 'double helix' 1RV5 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 11 1_555 -0.716 -0.560 -0.285 -12.381 -9.121 6.653 1 C_DA2:DT11_D C 2 ? D 11 ? 20 1 1 A DA 3 1_555 B DT 10 1_555 0.344 -0.123 0.373 4.246 -11.534 7.252 2 C_DA3:DT10_D C 3 ? D 10 ? 20 1 1 A DG 4 1_555 B DC 9 1_555 0.191 -0.090 0.994 21.472 -7.599 0.936 3 C_DG4:DC9_D C 4 ? D 9 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 -0.146 -0.012 0.640 8.418 3.920 1.533 4 C_DA5:DT8_D C 5 ? D 8 ? 20 1 1 A DT 6 1_555 B DA 7 1_555 -1.470 -0.167 -0.452 14.912 -13.846 7.227 5 C_DT6:DA7_D C 6 ? D 7 ? 20 1 1 A DA 7 1_555 B DT 6 1_555 1.006 -0.427 -0.267 -6.052 -7.574 -2.870 6 C_DA7:DT6_D C 7 ? D 6 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 0.018 0.046 0.034 -2.295 -2.454 2.482 7 C_DT8:DA5_D C 8 ? D 5 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 -0.177 -0.235 -0.046 -6.635 -14.415 2.317 8 C_DC9:DG4_D C 9 ? D 4 ? 19 1 1 A DT 10 1_555 B DA 3 1_555 -0.325 -0.106 -0.148 4.256 -13.176 6.792 9 C_DT10:DA3_D C 10 ? D 3 ? 20 1 1 A DT 11 1_555 B DA 2 1_555 -0.227 -0.509 -0.219 12.041 -3.805 1.706 10 C_DT11:DA2_D C 11 ? D 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 11 1_555 A DA 3 1_555 B DT 10 1_555 0.227 0.630 2.927 -2.929 -4.682 34.558 1.669 -0.767 2.792 -7.819 4.891 34.984 1 CC_DA2DA3:DT10DT11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 A DA 3 1_555 B DT 10 1_555 A DG 4 1_555 B DC 9 1_555 0.555 -0.265 3.058 -5.443 -0.385 31.862 -0.414 -1.885 2.929 -0.695 9.824 32.314 2 CC_DA3DG4:DC9DT10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 -0.435 -0.983 3.646 0.304 -10.728 34.566 0.172 0.751 3.771 -17.539 -0.498 36.145 3 CC_DG4DA5:DT8DC9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 A DA 5 1_555 B DT 8 1_555 A DT 6 1_555 B DA 7 1_555 -0.698 -1.468 3.548 -0.696 16.372 22.539 -6.788 1.294 2.050 36.350 1.545 27.804 4 CC_DA5DT6:DA7DT8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 A DT 6 1_555 B DA 7 1_555 A DA 7 1_555 B DT 6 1_555 -0.164 -2.263 3.935 -1.410 20.083 35.485 -5.574 0.074 2.376 30.147 2.117 40.637 5 CC_DT6DA7:DT6DA7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 A DA 7 1_555 B DT 6 1_555 A DT 8 1_555 B DA 5 1_555 0.833 -1.162 3.729 0.871 14.576 27.723 -5.091 -1.370 2.807 28.087 -1.679 31.267 6 CC_DA7DT8:DA5DT6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 0.274 -0.538 3.586 4.428 -8.075 38.622 0.261 0.174 3.631 -12.002 -6.581 39.664 7 CC_DT8DC9:DG4DA5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 A DC 9 1_555 B DG 4 1_555 A DT 10 1_555 B DA 3 1_555 -0.355 0.113 3.199 0.818 5.449 27.199 -1.053 0.933 3.149 11.437 -1.718 27.741 8 CC_DC9DT10:DA3DG4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 A DT 10 1_555 B DA 3 1_555 A DT 11 1_555 B DA 2 1_555 -0.484 0.682 3.259 -2.307 7.695 25.986 -0.548 0.430 3.348 16.614 4.981 27.178 9 CC_DT10DT11:DA2DA3_DD C 10 ? D 3 ? C 11 ? D 2 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1RVA _pdbx_initial_refinement_model.details ? #