HEADER LYASE 05-JAN-04 1S0Y TITLE THE STRUCTURE OF TRANS-3-CHLOROACRYLIC ACID DEHALOGENASE, COVALENTLY TITLE 2 INACTIVATED BY THE MECHANISM-BASED INHIBITOR 3-BROMOPROPIOLATE AT 2.3 TITLE 3 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-SUBUNIT OF TRANS-3-CHLOROACRYLIC ACID DEHALOGENASE; COMPND 3 CHAIN: A, C, E, G, I, K; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-SUBUNIT OF TRANS-3-CHLOROACRYLIC ACID DEHALOGENASE; COMPND 7 CHAIN: B, D, F, H, J, L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PAVONACEAE; SOURCE 3 ORGANISM_TAXID: 47881; SOURCE 4 STRAIN: 170; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: PSEUDOMONAS PAVONACEAE; SOURCE 9 ORGANISM_TAXID: 47881; SOURCE 10 STRAIN: 170; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEHALOGENASE, TAUTOMERASE FAMILY, COVALENT MODIFICATION, INHIBITION, KEYWDS 2 MICHAEL ADDITION, DEHALOGENATION MECHANISM, MALONYL INHIBITOR, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR R.M.DE JONG,W.BRUGMAN,G.J.POELARENDS,C.P.WHITMAN,B.W.DIJKSTRA REVDAT 5 23-AUG-23 1S0Y 1 REMARK LINK REVDAT 4 29-APR-15 1S0Y 1 HETSYN VERSN REVDAT 3 24-FEB-09 1S0Y 1 VERSN REVDAT 2 06-APR-04 1S0Y 1 JRNL REVDAT 1 24-FEB-04 1S0Y 0 JRNL AUTH R.M.DE JONG,W.BRUGMAN,G.J.POELARENDS,C.P.WHITMAN, JRNL AUTH 2 B.W.DIJKSTRA JRNL TITL THE X-RAY STRUCTURE OF TRANS-3-CHLOROACRYLIC ACID JRNL TITL 2 DEHALOGENASE REVEALS A NOVEL HYDRATION MECHANISM IN THE JRNL TITL 3 TAUTOMERASE SUPERFAMILY JRNL REF J.BIOL.CHEM. V. 279 11546 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14701869 JRNL DOI 10.1074/JBC.M311966200 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1420461.840 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 33258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1700 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 34958 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5092 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 244 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5324 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 171 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.04000 REMARK 3 B22 (A**2) : -3.26000 REMARK 3 B33 (A**2) : -8.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.230 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.930 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.990 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.740 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 31.74 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : INH.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : INH.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OTHER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.57 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34262 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.27700 REMARK 200 R SYM FOR SHELL (I) : 0.27500 REMARK 200 FOR SHELL : 2.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1OTF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (W/V) PEG 4000, 100MM SODIUM REMARK 280 ACETATE, 0.15 AMMONIUM ACETATE, PH 4.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.31850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 64 REMARK 465 ASN A 65 REMARK 465 ALA A 66 REMARK 465 ASN A 67 REMARK 465 ASP A 68 REMARK 465 LYS A 69 REMARK 465 ALA A 70 REMARK 465 LEU A 71 REMARK 465 ILE A 72 REMARK 465 ALA A 73 REMARK 465 LYS A 74 REMARK 465 LEU A 75 REMARK 465 LYS A 76 REMARK 465 MET B 1 REMARK 465 ILE B 57 REMARK 465 HIS B 58 REMARK 465 GLY B 59 REMARK 465 GLU B 60 REMARK 465 ALA B 61 REMARK 465 ALA B 62 REMARK 465 SER B 63 REMARK 465 THR B 64 REMARK 465 GLU B 65 REMARK 465 ARG B 66 REMARK 465 THR B 67 REMARK 465 PRO B 68 REMARK 465 ALA B 69 REMARK 465 VAL B 70 REMARK 465 SER B 71 REMARK 465 MET C 1 REMARK 465 VAL C 62 REMARK 465 PRO C 63 REMARK 465 GLY C 64 REMARK 465 ASN C 65 REMARK 465 ALA C 66 REMARK 465 ASN C 67 REMARK 465 ASP C 68 REMARK 465 LYS C 69 REMARK 465 ALA C 70 REMARK 465 LEU C 71 REMARK 465 ILE C 72 REMARK 465 ALA C 73 REMARK 465 LYS C 74 REMARK 465 LEU C 75 REMARK 465 LYS C 76 REMARK 465 MET D 1 REMARK 465 HIS D 58 REMARK 465 GLY D 59 REMARK 465 GLU D 60 REMARK 465 ALA D 61 REMARK 465 ALA D 62 REMARK 465 SER D 63 REMARK 465 THR D 64 REMARK 465 GLU D 65 REMARK 465 ARG D 66 REMARK 465 THR D 67 REMARK 465 PRO D 68 REMARK 465 ALA D 69 REMARK 465 VAL D 70 REMARK 465 SER D 71 REMARK 465 MET E 1 REMARK 465 PRO E 63 REMARK 465 GLY E 64 REMARK 465 ASN E 65 REMARK 465 ALA E 66 REMARK 465 ASN E 67 REMARK 465 ASP E 68 REMARK 465 LYS E 69 REMARK 465 ALA E 70 REMARK 465 LEU E 71 REMARK 465 ILE E 72 REMARK 465 ALA E 73 REMARK 465 LYS E 74 REMARK 465 LEU E 75 REMARK 465 LYS E 76 REMARK 465 MET F 1 REMARK 465 GLY F 59 REMARK 465 GLU F 60 REMARK 465 ALA F 61 REMARK 465 ALA F 62 REMARK 465 SER F 63 REMARK 465 THR F 64 REMARK 465 GLU F 65 REMARK 465 ARG F 66 REMARK 465 THR F 67 REMARK 465 PRO F 68 REMARK 465 ALA F 69 REMARK 465 VAL F 70 REMARK 465 SER F 71 REMARK 465 MET G 1 REMARK 465 GLY G 64 REMARK 465 ASN G 65 REMARK 465 ALA G 66 REMARK 465 ASN G 67 REMARK 465 ASP G 68 REMARK 465 LYS G 69 REMARK 465 ALA G 70 REMARK 465 LEU G 71 REMARK 465 ILE G 72 REMARK 465 ALA G 73 REMARK 465 LYS G 74 REMARK 465 LEU G 75 REMARK 465 LYS G 76 REMARK 465 MET H 1 REMARK 465 HIS H 58 REMARK 465 GLY H 59 REMARK 465 GLU H 60 REMARK 465 ALA H 61 REMARK 465 ALA H 62 REMARK 465 SER H 63 REMARK 465 THR H 64 REMARK 465 GLU H 65 REMARK 465 ARG H 66 REMARK 465 THR H 67 REMARK 465 PRO H 68 REMARK 465 ALA H 69 REMARK 465 VAL H 70 REMARK 465 SER H 71 REMARK 465 MET I 1 REMARK 465 GLY I 64 REMARK 465 ASN I 65 REMARK 465 ALA I 66 REMARK 465 ASN I 67 REMARK 465 ASP I 68 REMARK 465 LYS I 69 REMARK 465 ALA I 70 REMARK 465 LEU I 71 REMARK 465 ILE I 72 REMARK 465 ALA I 73 REMARK 465 LYS I 74 REMARK 465 LEU I 75 REMARK 465 LYS I 76 REMARK 465 MET J 1 REMARK 465 ILE J 57 REMARK 465 HIS J 58 REMARK 465 GLY J 59 REMARK 465 GLU J 60 REMARK 465 ALA J 61 REMARK 465 ALA J 62 REMARK 465 SER J 63 REMARK 465 THR J 64 REMARK 465 GLU J 65 REMARK 465 ARG J 66 REMARK 465 THR J 67 REMARK 465 PRO J 68 REMARK 465 ALA J 69 REMARK 465 VAL J 70 REMARK 465 SER J 71 REMARK 465 MET K 1 REMARK 465 PRO K 63 REMARK 465 GLY K 64 REMARK 465 ASN K 65 REMARK 465 ALA K 66 REMARK 465 ASN K 67 REMARK 465 ASP K 68 REMARK 465 LYS K 69 REMARK 465 ALA K 70 REMARK 465 LEU K 71 REMARK 465 ILE K 72 REMARK 465 ALA K 73 REMARK 465 LYS K 74 REMARK 465 LEU K 75 REMARK 465 LYS K 76 REMARK 465 MET L 1 REMARK 465 ILE L 57 REMARK 465 HIS L 58 REMARK 465 GLY L 59 REMARK 465 GLU L 60 REMARK 465 ALA L 61 REMARK 465 ALA L 62 REMARK 465 SER L 63 REMARK 465 THR L 64 REMARK 465 GLU L 65 REMARK 465 ARG L 66 REMARK 465 THR L 67 REMARK 465 PRO L 68 REMARK 465 ALA L 69 REMARK 465 VAL L 70 REMARK 465 SER L 71 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 ASN A 38 CG OD1 ND2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLU C 15 CG CD OE1 OE2 REMARK 470 GLU C 37 CG CD OE1 OE2 REMARK 470 GLU C 56 CG CD OE1 OE2 REMARK 470 ARG D 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 30 CG CD CE NZ REMARK 470 LYS D 37 CG CD CE NZ REMARK 470 GLU E 15 CG CD OE1 OE2 REMARK 470 ARG E 36 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 37 CG CD OE1 OE2 REMARK 470 LYS F 30 CG CD CE NZ REMARK 470 LYS F 37 CG CD CE NZ REMARK 470 GLU G 37 CG CD OE1 OE2 REMARK 470 ASN G 38 CG OD1 ND2 REMARK 470 GLU G 56 CG CD OE1 OE2 REMARK 470 ARG H 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS H 30 CG CD CE NZ REMARK 470 GLU I 15 CG CD OE1 OE2 REMARK 470 ARG I 26 CG CD NE CZ NH1 NH2 REMARK 470 GLU I 37 CG CD OE1 OE2 REMARK 470 GLU I 56 CG CD OE1 OE2 REMARK 470 LEU J 12 CG CD1 CD2 REMARK 470 ARG J 16 CG CD NE CZ NH1 NH2 REMARK 470 LYS J 30 CG CD CE NZ REMARK 470 LYS J 37 CG CD CE NZ REMARK 470 GLU K 15 CG CD OE1 OE2 REMARK 470 ARG K 36 CG CD NE CZ NH1 NH2 REMARK 470 ASN L 29 CG OD1 ND2 REMARK 470 LYS L 30 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 54 17.75 51.93 REMARK 500 ASP I 60 151.32 -49.87 REMARK 500 PRO L 36 -17.52 -49.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA F 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA H 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA J 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA L 106 DBREF 1S0Y A 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y B 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 DBREF 1S0Y C 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y D 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 DBREF 1S0Y E 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y F 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 DBREF 1S0Y G 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y H 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 DBREF 1S0Y I 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y J 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 DBREF 1S0Y K 1 76 UNP Q9EV85 Q9EV85_PSEPV 1 76 DBREF 1S0Y L 1 71 UNP Q9EV84 Q9EV84_PSEPV 1 71 SEQRES 1 A 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 A 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 A 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 A 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 A 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 A 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 B 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 B 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 B 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 B 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 B 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 B 71 ARG THR PRO ALA VAL SER SEQRES 1 C 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 C 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 C 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 C 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 C 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 C 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 D 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 D 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 D 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 D 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 D 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 D 71 ARG THR PRO ALA VAL SER SEQRES 1 E 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 E 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 E 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 E 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 E 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 E 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 F 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 F 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 F 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 F 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 F 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 F 71 ARG THR PRO ALA VAL SER SEQRES 1 G 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 G 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 G 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 G 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 G 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 G 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 H 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 H 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 H 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 H 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 H 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 H 71 ARG THR PRO ALA VAL SER SEQRES 1 I 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 I 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 I 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 I 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 I 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 I 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 J 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 J 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 J 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 J 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 J 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 J 71 ARG THR PRO ALA VAL SER SEQRES 1 K 76 MET PRO MET ILE SER CYS ASP MET ARG TYR GLY ARG THR SEQRES 2 K 76 ASP GLU GLN LYS ARG ALA LEU SER ALA GLY LEU LEU ARG SEQRES 3 K 76 VAL ILE SER GLU ALA THR GLY GLU PRO ARG GLU ASN ILE SEQRES 4 K 76 PHE PHE VAL ILE ARG GLU GLY SER GLY ILE ASN PHE VAL SEQRES 5 K 76 GLU HIS GLY GLU HIS LEU PRO ASP TYR VAL PRO GLY ASN SEQRES 6 K 76 ALA ASN ASP LYS ALA LEU ILE ALA LYS LEU LYS SEQRES 1 L 71 MET PRO PHE ILE GLU CYS HIS ILE ALA THR GLY LEU SER SEQRES 2 L 71 VAL ALA ARG LYS GLN GLN LEU ILE ARG ASP VAL ILE ASP SEQRES 3 L 71 VAL THR ASN LYS SER ILE GLY SER ASP PRO LYS ILE ILE SEQRES 4 L 71 ASN VAL LEU LEU VAL GLU HIS ALA GLU ALA ASN MET SER SEQRES 5 L 71 ILE SER GLY ARG ILE HIS GLY GLU ALA ALA SER THR GLU SEQRES 6 L 71 ARG THR PRO ALA VAL SER HET MLA B 101 6 HET MLA D 102 6 HET MLA F 103 6 HET MLA H 104 6 HET MLA J 105 6 HET MLA L 106 6 HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 13 MLA 6(C3 H4 O4) FORMUL 19 HOH *171(H2 O) HELIX 1 1 THR A 13 GLY A 33 1 21 HELIX 2 2 PRO A 35 ASN A 38 5 4 HELIX 3 3 SER A 47 ILE A 49 5 3 HELIX 4 4 SER B 13 GLY B 33 1 21 HELIX 5 5 ASP B 35 ILE B 39 5 5 HELIX 6 6 ALA B 47 ALA B 49 5 3 HELIX 7 7 THR C 13 GLY C 33 1 21 HELIX 8 8 PRO C 35 ILE C 39 5 5 HELIX 9 9 SER C 47 ILE C 49 5 3 HELIX 10 10 SER D 13 GLY D 33 1 21 HELIX 11 11 ASP D 35 ILE D 39 5 5 HELIX 12 12 ALA D 47 ALA D 49 5 3 HELIX 13 13 THR E 13 GLY E 33 1 21 HELIX 14 14 PRO E 35 ILE E 39 5 5 HELIX 15 15 SER E 47 ILE E 49 5 3 HELIX 16 16 SER F 13 ILE F 32 1 20 HELIX 17 17 ASP F 35 ILE F 39 5 5 HELIX 18 18 ALA F 47 ALA F 49 5 3 HELIX 19 19 THR G 13 GLY G 33 1 21 HELIX 20 20 PRO G 35 ASN G 38 5 4 HELIX 21 21 SER G 47 ILE G 49 5 3 HELIX 22 22 SER H 13 GLY H 33 1 21 HELIX 23 23 ASP H 35 ILE H 39 5 5 HELIX 24 24 ALA H 47 ALA H 49 5 3 HELIX 25 25 THR I 13 GLY I 33 1 21 HELIX 26 26 PRO I 35 ILE I 39 5 5 HELIX 27 27 SER I 47 ILE I 49 5 3 HELIX 28 28 SER J 13 GLY J 33 1 21 HELIX 29 29 ASP J 35 ILE J 39 5 5 HELIX 30 30 ALA J 47 ALA J 49 5 3 HELIX 31 31 THR K 13 GLY K 33 1 21 HELIX 32 32 PRO K 35 ASN K 38 5 4 HELIX 33 33 SER K 47 ILE K 49 5 3 HELIX 34 34 SER L 13 GLY L 33 1 21 HELIX 35 35 ASP L 35 ILE L 39 5 5 HELIX 36 36 ALA L 47 ALA L 49 5 3 SHEET 1 A 7 MET B 51 SER B 52 0 SHEET 2 A 7 ASN D 40 HIS D 46 -1 O VAL D 41 N SER B 52 SHEET 3 A 7 PHE D 3 ALA D 9 1 N CYS D 6 O LEU D 42 SHEET 4 A 7 MET A 3 ARG A 9 -1 N MET A 3 O HIS D 7 SHEET 5 A 7 PHE A 40 GLY A 46 1 O PHE A 40 N ILE A 4 SHEET 6 A 7 PHE C 51 GLU C 53 -1 O VAL C 52 N PHE A 41 SHEET 7 A 7 GLU C 56 HIS C 57 -1 O GLU C 56 N GLU C 53 SHEET 1 B 7 GLU A 56 HIS A 57 0 SHEET 2 B 7 PHE A 51 GLU A 53 -1 N GLU A 53 O GLU A 56 SHEET 3 B 7 PHE E 40 GLY E 46 -1 O PHE E 41 N VAL A 52 SHEET 4 B 7 MET E 3 ARG E 9 1 N ILE E 4 O PHE E 40 SHEET 5 B 7 PHE B 3 ALA B 9 -1 N HIS B 7 O MET E 3 SHEET 6 B 7 ASN B 40 HIS B 46 1 O VAL B 44 N CYS B 6 SHEET 7 B 7 MET F 51 SER F 52 -1 O SER F 52 N VAL B 41 SHEET 1 C 7 MET D 51 SER D 52 0 SHEET 2 C 7 ASN F 40 HIS F 46 -1 O VAL F 41 N SER D 52 SHEET 3 C 7 PHE F 3 ALA F 9 1 N ILE F 4 O ASN F 40 SHEET 4 C 7 MET C 3 ARG C 9 -1 N MET C 3 O HIS F 7 SHEET 5 C 7 PHE C 40 GLY C 46 1 O ARG C 44 N CYS C 6 SHEET 6 C 7 PHE E 51 GLU E 53 -1 O VAL E 52 N PHE C 41 SHEET 7 C 7 GLU E 56 HIS E 57 -1 O GLU E 56 N GLU E 53 SHEET 1 D 7 MET H 51 SER H 52 0 SHEET 2 D 7 ASN J 40 HIS J 46 -1 O VAL J 41 N SER H 52 SHEET 3 D 7 PHE J 3 ALA J 9 1 N ILE J 4 O ASN J 40 SHEET 4 D 7 MET G 3 ARG G 9 -1 N MET G 3 O HIS J 7 SHEET 5 D 7 PHE G 40 GLY G 46 1 O ARG G 44 N MET G 8 SHEET 6 D 7 PHE I 51 GLU I 53 -1 O VAL I 52 N PHE G 41 SHEET 7 D 7 GLU I 56 HIS I 57 -1 O GLU I 56 N GLU I 53 SHEET 1 E 7 GLU G 56 HIS G 57 0 SHEET 2 E 7 PHE G 51 GLU G 53 -1 N GLU G 53 O GLU G 56 SHEET 3 E 7 PHE K 40 GLY K 46 -1 O PHE K 41 N VAL G 52 SHEET 4 E 7 MET K 3 ARG K 9 1 N ILE K 4 O PHE K 40 SHEET 5 E 7 PHE H 3 ALA H 9 -1 N HIS H 7 O MET K 3 SHEET 6 E 7 ASN H 40 HIS H 46 1 O ASN H 40 N ILE H 4 SHEET 7 E 7 MET L 51 SER L 52 -1 O SER L 52 N VAL H 41 SHEET 1 F 7 MET J 51 SER J 52 0 SHEET 2 F 7 ASN L 40 HIS L 46 -1 O VAL L 41 N SER J 52 SHEET 3 F 7 PHE L 3 ALA L 9 1 N CYS L 6 O LEU L 42 SHEET 4 F 7 MET I 3 ARG I 9 -1 N MET I 3 O HIS L 7 SHEET 5 F 7 PHE I 40 GLY I 46 1 O ARG I 44 N CYS I 6 SHEET 6 F 7 PHE K 51 GLU K 53 -1 O VAL K 52 N PHE I 41 SHEET 7 F 7 GLU K 56 HIS K 57 -1 O GLU K 56 N GLU K 53 LINK N PRO B 2 C3 MLA B 101 1555 1555 1.38 LINK N PRO D 2 C3 MLA D 102 1555 1555 1.38 LINK N PRO F 2 C3 MLA F 103 1555 1555 1.37 LINK N PRO H 2 C3 MLA H 104 1555 1555 1.37 LINK N PRO J 2 C3 MLA J 105 1555 1555 1.37 LINK N PRO L 2 C3 MLA L 106 1555 1555 1.38 SITE 1 AC1 9 PRO B 2 PHE B 3 ILE B 38 ASP E 7 SITE 2 AC1 9 MET E 8 ARG E 9 ARG E 12 GLU E 53 SITE 3 AC1 9 LEU E 58 SITE 1 AC2 10 ASP A 7 MET A 8 ARG A 9 ARG A 12 SITE 2 AC2 10 PHE A 51 GLU A 53 HOH A 89 PRO D 2 SITE 3 AC2 10 PHE D 3 ILE D 38 SITE 1 AC3 8 ASP C 7 ARG C 9 ARG C 12 PHE C 51 SITE 2 AC3 8 GLU C 53 PRO F 2 PHE F 3 ILE F 38 SITE 1 AC4 8 PRO H 2 PHE H 3 ASP K 7 MET K 8 SITE 2 AC4 8 ARG K 9 ARG K 12 PHE K 51 GLU K 53 SITE 1 AC5 9 ASP G 7 MET G 8 ARG G 9 ARG G 12 SITE 2 AC5 9 PHE G 51 HOH G 91 PRO J 2 PHE J 3 SITE 3 AC5 9 ILE J 38 SITE 1 AC6 7 ASP I 7 ARG I 9 ARG I 12 PHE I 51 SITE 2 AC6 7 PRO L 2 PHE L 3 ILE L 38 CRYST1 55.379 100.637 69.850 90.00 98.87 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018057 0.000000 0.002818 0.00000 SCALE2 0.000000 0.009937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014490 0.00000