HEADER OXYGEN STORAGE/TRANSPORT 22-JAN-04 1S5Y TITLE THE CRYSTAL STRUCTURE OF TREMATOMUS BERNACCHII HEMOGLOBIN OXIDIZED BY TITLE 2 FERRICYANIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN ALPHA CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: HEMOGLOBIN BETA CHAIN; COMPND 6 CHAIN: B, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREMATOMUS BERNACCHII; SOURCE 3 ORGANISM_COMMON: EMERALD ROCKCOD; SOURCE 4 ORGANISM_TAXID: 40690; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: TREMATOMUS BERNACCHII; SOURCE 7 ORGANISM_COMMON: EMERALD ROCKCOD; SOURCE 8 ORGANISM_TAXID: 40690 KEYWDS HEMICHROME, BIS-HISTIDINE, OXIDATION, OXYGEN STORAGE-TRANSPORT KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.VITAGLIANO,G.BONOMI,A.RICCIO,G.DI PRISCO,G.SMULEVICH,L.MAZZARELLA REVDAT 4 20-NOV-24 1S5Y 1 REMARK LINK REVDAT 3 11-OCT-17 1S5Y 1 REMARK REVDAT 2 24-FEB-09 1S5Y 1 VERSN REVDAT 1 04-MAY-04 1S5Y 0 JRNL AUTH L.VITAGLIANO,G.BONOMI,A.RICCIO,G.DI PRISCO,G.SMULEVICH, JRNL AUTH 2 L.MAZZARELLA JRNL TITL THE OXIDATION PROCESS OF ANTARCTIC FISH HEMOGLOBINS JRNL REF EUR.J.BIOCHEM. V. 271 1651 2004 JRNL REFN ISSN 0014-2956 JRNL PMID 15096204 JRNL DOI 10.1111/J.1432-1033.2004.04054.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.RICCIO,L.VITAGLIANO,G.DI PRISCO,A.ZAGARI,L.MAZZARELLA REMARK 1 TITL THE CRYSTAL STRUCTURE OF A TETRAMERIC HEMOGLOBIN IN A REMARK 1 TITL 2 PARTIAL HEMICHROME STATE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 99 9801 2002 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 12093902 REMARK 1 DOI 10.1073/PNAS.132182099 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 20326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1717 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4308 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 172 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 17.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.940 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, XPRESS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23515 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPEG 5000, TRIS, PH 7.6, LIQUID REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE TETRAMER CONTAINED IN THE REMARK 300 ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE B 45 REMARK 465 GLY B 46 REMARK 465 ASN B 47 REMARK 465 LEU B 48 REMARK 465 TYR B 49 REMARK 465 ASN B 50 REMARK 465 ALA B 51 REMARK 465 GLU B 52 REMARK 465 TYR B 145 REMARK 465 HIS B 146 REMARK 465 PHE D 45 REMARK 465 GLY D 46 REMARK 465 ASN D 47 REMARK 465 LEU D 48 REMARK 465 TYR D 49 REMARK 465 ASN D 50 REMARK 465 ALA D 51 REMARK 465 GLU D 52 REMARK 465 TYR D 145 REMARK 465 HIS D 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 142 C ARG A 142 OXT -0.725 REMARK 500 ARG C 142 C ARG C 142 OXT 0.131 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 36 C - N - CA ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 53 144.62 -25.65 REMARK 500 ASP A 76 87.47 -153.81 REMARK 500 PRO B 36 -37.49 -35.62 REMARK 500 ASN B 80 48.34 -155.15 REMARK 500 SER B 93 -60.29 -94.32 REMARK 500 VAL C 49 64.04 -102.26 REMARK 500 SER C 53 133.18 0.46 REMARK 500 ASP C 76 84.84 -151.82 REMARK 500 PRO D 36 -32.87 -36.68 REMARK 500 PHE D 42 55.53 -142.90 REMARK 500 SER D 43 32.80 -64.49 REMARK 500 MET D 78 -18.63 -47.98 REMARK 500 SER D 93 -81.40 -68.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 NE2 REMARK 620 2 HEM A 200 NA 92.5 REMARK 620 3 HEM A 200 NB 92.1 90.0 REMARK 620 4 HEM A 200 NC 91.3 176.2 90.1 REMARK 620 5 HEM A 200 ND 92.3 88.4 175.3 91.2 REMARK 620 6 HOH A 850 O 164.3 103.0 90.2 73.1 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 400 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 63 NE2 REMARK 620 2 HEM B 400 NA 84.6 REMARK 620 3 HEM B 400 NB 102.8 88.8 REMARK 620 4 HEM B 400 NC 96.1 177.7 88.8 REMARK 620 5 HEM B 400 ND 76.7 92.8 178.2 89.5 REMARK 620 6 HIS B 92 NE2 165.9 88.7 89.4 91.1 91.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 600 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 88 NE2 REMARK 620 2 HEM C 600 NA 98.2 REMARK 620 3 HEM C 600 NB 97.4 89.1 REMARK 620 4 HEM C 600 NC 85.9 175.7 89.2 REMARK 620 5 HEM C 600 ND 87.4 90.7 175.2 90.6 REMARK 620 6 HOH C 900 O 167.8 93.6 85.7 82.3 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 800 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 63 NE2 REMARK 620 2 HEM D 800 NA 84.5 REMARK 620 3 HEM D 800 NB 109.8 87.2 REMARK 620 4 HEM D 800 NC 97.7 174.8 87.7 REMARK 620 5 HEM D 800 ND 74.1 92.2 175.9 92.9 REMARK 620 6 HIS D 92 NE2 160.6 92.3 89.1 87.2 86.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 800 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LA6 RELATED DB: PDB REMARK 900 RELATED ID: 1S5X RELATED DB: PDB REMARK 900 THE SAME PROTEIN OXIDIZED BY AIR DBREF 1S5Y A 1 142 UNP P80043 HBA_PAGBE 1 142 DBREF 1S5Y B 1 146 UNP P80044 HBB_PAGBE 1 146 DBREF 1S5Y C 1 142 UNP P80043 HBA_PAGBE 1 142 DBREF 1S5Y D 1 146 UNP P80044 HBB_PAGBE 1 146 SEQRES 1 A 143 ACE SER LEU SER ASP LYS ASP LYS ALA ALA VAL ARG ALA SEQRES 2 A 143 LEU TRP SER LYS ILE GLY LYS SER ALA ASP ALA ILE GLY SEQRES 3 A 143 ASN ASP ALA LEU SER ARG MET ILE VAL VAL TYR PRO GLN SEQRES 4 A 143 THR LYS THR TYR PHE SER HIS TRP PRO ASP VAL THR PRO SEQRES 5 A 143 GLY SER PRO HIS ILE LYS ALA HIS GLY LYS LYS VAL MET SEQRES 6 A 143 GLY GLY ILE ALA LEU ALA VAL SER LYS ILE ASP ASP LEU SEQRES 7 A 143 LYS THR GLY LEU MET GLU LEU SER GLU GLN HIS ALA TYR SEQRES 8 A 143 LYS LEU ARG VAL ASP PRO ALA ASN PHE LYS ILE LEU ASN SEQRES 9 A 143 HIS CYS ILE LEU VAL VAL ILE SER THR MET PHE PRO LYS SEQRES 10 A 143 GLU PHE THR PRO GLU ALA HIS VAL SER LEU ASP LYS PHE SEQRES 11 A 143 LEU SER GLY VAL ALA LEU ALA LEU ALA GLU ARG TYR ARG SEQRES 1 B 146 VAL GLU TRP THR ASP LYS GLU ARG SER ILE ILE SER ASP SEQRES 2 B 146 ILE PHE SER HIS MET ASP TYR ASP ASP ILE GLY PRO LYS SEQRES 3 B 146 ALA LEU SER ARG CYS LEU ILE VAL TYR PRO TRP THR GLN SEQRES 4 B 146 ARG HIS PHE SER GLY PHE GLY ASN LEU TYR ASN ALA GLU SEQRES 5 B 146 ALA ILE ILE GLY ASN ALA ASN VAL ALA ALA HIS GLY ILE SEQRES 6 B 146 LYS VAL LEU HIS GLY LEU ASP ARG GLY VAL LYS ASN MET SEQRES 7 B 146 ASP ASN ILE ALA ALA THR TYR ALA ASP LEU SER THR LEU SEQRES 8 B 146 HIS SER GLU LYS LEU HIS VAL ASP PRO ASP ASN PHE LYS SEQRES 9 B 146 LEU LEU SER ASP CYS ILE THR ILE VAL LEU ALA ALA LYS SEQRES 10 B 146 MET GLY HIS ALA PHE THR ALA GLU THR GLN GLY ALA PHE SEQRES 11 B 146 GLN LYS PHE LEU ALA VAL VAL VAL SER ALA LEU GLY LYS SEQRES 12 B 146 GLN TYR HIS SEQRES 1 C 143 ACE SER LEU SER ASP LYS ASP LYS ALA ALA VAL ARG ALA SEQRES 2 C 143 LEU TRP SER LYS ILE GLY LYS SER ALA ASP ALA ILE GLY SEQRES 3 C 143 ASN ASP ALA LEU SER ARG MET ILE VAL VAL TYR PRO GLN SEQRES 4 C 143 THR LYS THR TYR PHE SER HIS TRP PRO ASP VAL THR PRO SEQRES 5 C 143 GLY SER PRO HIS ILE LYS ALA HIS GLY LYS LYS VAL MET SEQRES 6 C 143 GLY GLY ILE ALA LEU ALA VAL SER LYS ILE ASP ASP LEU SEQRES 7 C 143 LYS THR GLY LEU MET GLU LEU SER GLU GLN HIS ALA TYR SEQRES 8 C 143 LYS LEU ARG VAL ASP PRO ALA ASN PHE LYS ILE LEU ASN SEQRES 9 C 143 HIS CYS ILE LEU VAL VAL ILE SER THR MET PHE PRO LYS SEQRES 10 C 143 GLU PHE THR PRO GLU ALA HIS VAL SER LEU ASP LYS PHE SEQRES 11 C 143 LEU SER GLY VAL ALA LEU ALA LEU ALA GLU ARG TYR ARG SEQRES 1 D 146 VAL GLU TRP THR ASP LYS GLU ARG SER ILE ILE SER ASP SEQRES 2 D 146 ILE PHE SER HIS MET ASP TYR ASP ASP ILE GLY PRO LYS SEQRES 3 D 146 ALA LEU SER ARG CYS LEU ILE VAL TYR PRO TRP THR GLN SEQRES 4 D 146 ARG HIS PHE SER GLY PHE GLY ASN LEU TYR ASN ALA GLU SEQRES 5 D 146 ALA ILE ILE GLY ASN ALA ASN VAL ALA ALA HIS GLY ILE SEQRES 6 D 146 LYS VAL LEU HIS GLY LEU ASP ARG GLY VAL LYS ASN MET SEQRES 7 D 146 ASP ASN ILE ALA ALA THR TYR ALA ASP LEU SER THR LEU SEQRES 8 D 146 HIS SER GLU LYS LEU HIS VAL ASP PRO ASP ASN PHE LYS SEQRES 9 D 146 LEU LEU SER ASP CYS ILE THR ILE VAL LEU ALA ALA LYS SEQRES 10 D 146 MET GLY HIS ALA PHE THR ALA GLU THR GLN GLY ALA PHE SEQRES 11 D 146 GLN LYS PHE LEU ALA VAL VAL VAL SER ALA LEU GLY LYS SEQRES 12 D 146 GLN TYR HIS HET ACE A 0 3 HET ACE C 0 3 HET HEM A 200 43 HET HEM B 400 43 HET HEM C 600 43 HET HEM D 800 43 HETNAM ACE ACETYL GROUP HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 1 ACE 2(C2 H4 O) FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 9 HOH *82(H2 O) HELIX 1 1 SER A 3 GLY A 18 1 16 HELIX 2 2 SER A 20 TYR A 36 1 17 HELIX 3 3 PRO A 37 SER A 44 5 8 HELIX 4 4 SER A 53 LYS A 73 1 21 HELIX 5 5 ASP A 76 LEU A 81 1 6 HELIX 6 6 LEU A 81 LYS A 91 1 11 HELIX 7 7 ALA A 97 PHE A 114 1 18 HELIX 8 8 THR A 119 ALA A 138 1 20 HELIX 9 9 GLU A 139 TYR A 141 5 3 HELIX 10 10 THR B 4 MET B 18 1 15 HELIX 11 11 ASP B 19 TYR B 35 1 17 HELIX 12 12 PRO B 36 PHE B 42 5 7 HELIX 13 13 ASN B 57 LYS B 76 1 20 HELIX 14 14 ASN B 80 TYR B 85 1 6 HELIX 15 15 TYR B 85 LYS B 95 1 11 HELIX 16 16 PRO B 100 GLY B 119 1 20 HELIX 17 17 HIS B 120 PHE B 122 5 3 HELIX 18 18 THR B 123 GLY B 142 1 20 HELIX 19 19 SER C 3 GLY C 18 1 16 HELIX 20 20 SER C 20 TYR C 36 1 17 HELIX 21 21 PRO C 37 SER C 44 5 8 HELIX 22 22 SER C 53 LYS C 73 1 21 HELIX 23 23 ASP C 76 LEU C 81 1 6 HELIX 24 24 LEU C 81 TYR C 90 1 10 HELIX 25 25 ALA C 97 PHE C 114 1 18 HELIX 26 26 THR C 119 GLU C 139 1 21 HELIX 27 27 ARG C 140 ARG C 142 5 3 HELIX 28 28 THR D 4 MET D 18 1 15 HELIX 29 29 ASP D 19 TYR D 35 1 17 HELIX 30 30 PRO D 36 PHE D 42 5 7 HELIX 31 31 ASN D 57 ASN D 77 1 21 HELIX 32 32 ASN D 80 LYS D 95 1 16 HELIX 33 33 PRO D 100 GLY D 119 1 20 HELIX 34 34 HIS D 120 PHE D 122 5 3 HELIX 35 35 THR D 123 GLY D 142 1 20 LINK C ACE A 0 N SER A 1 1555 1555 1.33 LINK C ACE C 0 N SER C 1 1555 1555 1.33 LINK NE2 HIS A 88 FE HEM A 200 1555 1555 2.02 LINK FE HEM A 200 O HOH A 850 1555 1555 2.07 LINK NE2 HIS B 63 FE HEM B 400 1555 1555 2.11 LINK NE2 HIS B 92 FE HEM B 400 1555 1555 2.00 LINK NE2 HIS C 88 FE HEM C 600 1555 1555 2.09 LINK FE HEM C 600 O HOH C 900 1555 1555 2.09 LINK NE2 HIS D 63 FE HEM D 800 1555 1555 2.11 LINK NE2 HIS D 92 FE HEM D 800 1555 1555 2.02 SITE 1 AC1 14 TYR A 42 PHE A 43 HIS A 45 HIS A 59 SITE 2 AC1 14 LYS A 62 LEU A 84 GLN A 87 HIS A 88 SITE 3 AC1 14 LEU A 92 VAL A 94 ASN A 98 PHE A 99 SITE 4 AC1 14 LEU A 137 HOH A 850 SITE 1 AC2 13 HIS B 41 PHE B 42 HIS B 63 LYS B 66 SITE 2 AC2 13 LEU B 88 LEU B 91 HIS B 92 LEU B 96 SITE 3 AC2 13 VAL B 98 ASN B 102 PHE B 103 LEU B 106 SITE 4 AC2 13 LEU B 141 SITE 1 AC3 13 TYR C 42 HIS C 45 HIS C 59 LYS C 62 SITE 2 AC3 13 VAL C 63 GLN C 87 HIS C 88 LEU C 92 SITE 3 AC3 13 VAL C 94 ASN C 98 LEU C 102 LEU C 137 SITE 4 AC3 13 HOH C 900 SITE 1 AC4 13 HIS D 41 PHE D 42 HIS D 63 LYS D 66 SITE 2 AC4 13 VAL D 67 LEU D 88 LEU D 91 HIS D 92 SITE 3 AC4 13 LEU D 96 ASN D 102 PHE D 103 LEU D 106 SITE 4 AC4 13 LEU D 141 CRYST1 55.993 62.980 63.502 77.06 69.79 84.17 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017860 -0.001820 -0.006340 0.00000 SCALE2 0.000000 0.015960 -0.003300 0.00000 SCALE3 0.000000 0.000000 0.017130 0.00000 HETATM 1 C ACE A 0 -5.365 -13.953 7.993 1.00 36.97 C HETATM 2 O ACE A 0 -4.710 -14.524 7.116 1.00 38.74 O HETATM 3 CH3 ACE A 0 -5.989 -12.585 7.738 1.00 36.72 C