data_1SP4 # _entry.id 1SP4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SP4 pdb_00001sp4 10.2210/pdb1sp4/pdb RCSB RCSB021890 ? ? WWPDB D_1000021890 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-04 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2014-02-12 6 'Structure model' 1 5 2017-10-11 7 'Structure model' 1 6 2024-03-13 8 'Structure model' 1 7 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' Advisory 11 6 'Structure model' 'Refinement description' 12 7 'Structure model' Advisory 13 7 'Structure model' 'Data collection' 14 7 'Structure model' 'Database references' 15 7 'Structure model' 'Derived calculations' 16 7 'Structure model' 'Source and taxonomy' 17 7 'Structure model' 'Structure summary' 18 8 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 6 'Structure model' pdbx_unobs_or_zero_occ_residues 3 6 'Structure model' software 4 7 'Structure model' chem_comp_atom 5 7 'Structure model' chem_comp_bond 6 7 'Structure model' database_2 7 7 'Structure model' entity 8 7 'Structure model' pdbx_entity_src_syn 9 7 'Structure model' pdbx_unobs_or_zero_occ_atoms 10 7 'Structure model' pdbx_unobs_or_zero_occ_residues 11 7 'Structure model' struct_site 12 8 'Structure model' pdbx_entry_details 13 8 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_software.classification' 2 6 'Structure model' '_software.name' 3 7 'Structure model' '_database_2.pdbx_DOI' 4 7 'Structure model' '_database_2.pdbx_database_accession' 5 7 'Structure model' '_entity.details' 6 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 7 'Structure model' '_struct_site.pdbx_auth_seq_id' 9 8 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SP4 _pdbx_database_status.recvd_initial_deposition_date 2004-03-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stern, I.' 1 'Schaschke, N.' 2 'Moroder, L.' 3 'Turk, D.' 4 # _citation.id primary _citation.title ;Crystal structure of NS-134 in complex with bovine cathepsin B: a two-headed epoxysuccinyl inhibitor extends along the entire active-site cleft. ; _citation.journal_abbrev Biochem.J. _citation.journal_volume 381 _citation.page_first 511 _citation.page_last 517 _citation.year 2004 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15084146 _citation.pdbx_database_id_DOI 10.1042/BJ20040237 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stern, I.' 1 ? primary 'Schaschke, N.' 2 ? primary 'Moroder, L.' 3 ? primary 'Turk, D.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Cathepsin B' 5300.875 1 3.4.22.1 ? 'light chain' ? 2 polymer nat 'Cathepsin B' 22233.732 1 3.4.22.1 ? 'heavy chain' ? 3 non-polymer syn ;methyl N-[(2S)-4-{[(1S)-1-{[(2S)-2-carboxypyrrolidin-1-yl]carbonyl}-3-methylbutyl]amino}-2-hydroxy-4-oxobutanoyl]-L-leucylglycylglycinate ; 583.631 1 ? ? ? 'LEU-GLY-MEU. EPO is linked to the LEU-GLY-MEU as well as LEU-PRO. The inhibitor was chemically synthesized.' 4 water nat water 18.015 176 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNG LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNG A ? 2 'polypeptide(L)' no no ;RVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKC NKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMPCT ; ;RVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKC NKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMPCT ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;methyl N-[(2S)-4-{[(1S)-1-{[(2S)-2-carboxypyrrolidin-1-yl]carbonyl}-3-methylbutyl]amino}-2-hydroxy-4-oxobutanoyl]-L-leucylglycylglycinate ; EP2 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 PRO n 1 3 GLU n 1 4 SER n 1 5 PHE n 1 6 ASP n 1 7 ALA n 1 8 ARG n 1 9 GLU n 1 10 GLN n 1 11 TRP n 1 12 PRO n 1 13 ASN n 1 14 CYS n 1 15 PRO n 1 16 THR n 1 17 ILE n 1 18 LYS n 1 19 GLU n 1 20 ILE n 1 21 ARG n 1 22 ASP n 1 23 GLN n 1 24 GLY n 1 25 SER n 1 26 CYS n 1 27 GLY n 1 28 SER n 1 29 CYS n 1 30 TRP n 1 31 ALA n 1 32 PHE n 1 33 GLY n 1 34 ALA n 1 35 VAL n 1 36 GLU n 1 37 ALA n 1 38 ILE n 1 39 SER n 1 40 ASP n 1 41 ARG n 1 42 ILE n 1 43 CYS n 1 44 ILE n 1 45 HIS n 1 46 SER n 1 47 ASN n 1 48 GLY n 2 1 ARG n 2 2 VAL n 2 3 ASN n 2 4 VAL n 2 5 GLU n 2 6 VAL n 2 7 SER n 2 8 ALA n 2 9 GLU n 2 10 ASP n 2 11 MET n 2 12 LEU n 2 13 THR n 2 14 CYS n 2 15 CYS n 2 16 GLY n 2 17 GLY n 2 18 GLU n 2 19 CYS n 2 20 GLY n 2 21 ASP n 2 22 GLY n 2 23 CYS n 2 24 ASN n 2 25 GLY n 2 26 GLY n 2 27 PHE n 2 28 PRO n 2 29 SER n 2 30 GLY n 2 31 ALA n 2 32 TRP n 2 33 ASN n 2 34 PHE n 2 35 TRP n 2 36 THR n 2 37 LYS n 2 38 LYS n 2 39 GLY n 2 40 LEU n 2 41 VAL n 2 42 SER n 2 43 GLY n 2 44 GLY n 2 45 LEU n 2 46 TYR n 2 47 ASN n 2 48 SER n 2 49 HIS n 2 50 VAL n 2 51 GLY n 2 52 CYS n 2 53 ARG n 2 54 PRO n 2 55 TYR n 2 56 SER n 2 57 ILE n 2 58 PRO n 2 59 PRO n 2 60 CYS n 2 61 GLU n 2 62 HIS n 2 63 HIS n 2 64 VAL n 2 65 ASN n 2 66 GLY n 2 67 SER n 2 68 ARG n 2 69 PRO n 2 70 PRO n 2 71 CYS n 2 72 THR n 2 73 GLY n 2 74 GLU n 2 75 GLY n 2 76 ASP n 2 77 THR n 2 78 PRO n 2 79 LYS n 2 80 CYS n 2 81 ASN n 2 82 LYS n 2 83 THR n 2 84 CYS n 2 85 GLU n 2 86 PRO n 2 87 GLY n 2 88 TYR n 2 89 SER n 2 90 PRO n 2 91 SER n 2 92 TYR n 2 93 LYS n 2 94 GLU n 2 95 ASP n 2 96 LYS n 2 97 HIS n 2 98 PHE n 2 99 GLY n 2 100 CYS n 2 101 SER n 2 102 SER n 2 103 TYR n 2 104 SER n 2 105 VAL n 2 106 ALA n 2 107 ASN n 2 108 ASN n 2 109 GLU n 2 110 LYS n 2 111 GLU n 2 112 ILE n 2 113 MET n 2 114 ALA n 2 115 GLU n 2 116 ILE n 2 117 TYR n 2 118 LYS n 2 119 ASN n 2 120 GLY n 2 121 PRO n 2 122 VAL n 2 123 GLU n 2 124 GLY n 2 125 ALA n 2 126 PHE n 2 127 SER n 2 128 VAL n 2 129 TYR n 2 130 SER n 2 131 ASP n 2 132 PHE n 2 133 LEU n 2 134 LEU n 2 135 TYR n 2 136 LYS n 2 137 SER n 2 138 GLY n 2 139 VAL n 2 140 TYR n 2 141 GLN n 2 142 HIS n 2 143 VAL n 2 144 SER n 2 145 GLY n 2 146 GLU n 2 147 ILE n 2 148 MET n 2 149 GLY n 2 150 GLY n 2 151 HIS n 2 152 ALA n 2 153 ILE n 2 154 ARG n 2 155 ILE n 2 156 LEU n 2 157 GLY n 2 158 TRP n 2 159 GLY n 2 160 VAL n 2 161 GLU n 2 162 ASN n 2 163 GLY n 2 164 THR n 2 165 PRO n 2 166 TYR n 2 167 TRP n 2 168 LEU n 2 169 VAL n 2 170 GLY n 2 171 ASN n 2 172 SER n 2 173 TRP n 2 174 ASN n 2 175 THR n 2 176 ASP n 2 177 TRP n 2 178 GLY n 2 179 ASP n 2 180 ASN n 2 181 GLY n 2 182 PHE n 2 183 PHE n 2 184 LYS n 2 185 ILE n 2 186 LEU n 2 187 ARG n 2 188 GLY n 2 189 GLN n 2 190 ASP n 2 191 HIS n 2 192 CYS n 2 193 GLY n 2 194 ILE n 2 195 GLU n 2 196 SER n 2 197 GLU n 2 198 ILE n 2 199 VAL n 2 200 ALA n 2 201 GLY n 2 202 MET n 2 203 PRO n 2 204 CYS n 2 205 THR n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? cattle 'Bos taurus' 9913 Bos ? ? kidney ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? cattle 'Bos taurus' 9913 Bos ? ? kidney ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EP2 peptide-like . ;methyl N-[(2S)-4-{[(1S)-1-{[(2S)-2-carboxypyrrolidin-1-yl]carbonyl}-3-methylbutyl]amino}-2-hydroxy-4-oxobutanoyl]-L-leucylglycylglycinate ; NS-134 'C26 H41 N5 O10' 583.631 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 GLY 48 48 48 GLY GLY A . n B 2 1 ARG 1 49 49 ARG ARG B . n B 2 2 VAL 2 50 50 VAL VAL B . n B 2 3 ASN 3 51 51 ASN ASN B . n B 2 4 VAL 4 52 52 VAL VAL B . n B 2 5 GLU 5 53 53 GLU GLU B . n B 2 6 VAL 6 54 54 VAL VAL B . n B 2 7 SER 7 55 55 SER SER B . n B 2 8 ALA 8 56 56 ALA ALA B . n B 2 9 GLU 9 57 57 GLU GLU B . n B 2 10 ASP 10 58 58 ASP ASP B . n B 2 11 MET 11 59 59 MET MET B . n B 2 12 LEU 12 60 60 LEU LEU B . n B 2 13 THR 13 61 61 THR THR B . n B 2 14 CYS 14 62 62 CYS CYS B . n B 2 15 CYS 15 63 63 CYS CYS B . n B 2 16 GLY 16 64 64 GLY GLY B . n B 2 17 GLY 17 65 65 GLY GLY B . n B 2 18 GLU 18 66 66 GLU GLU B . n B 2 19 CYS 19 67 67 CYS CYS B . n B 2 20 GLY 20 68 68 GLY GLY B . n B 2 21 ASP 21 69 69 ASP ASP B . n B 2 22 GLY 22 70 70 GLY GLY B . n B 2 23 CYS 23 71 71 CYS CYS B . n B 2 24 ASN 24 72 72 ASN ASN B . n B 2 25 GLY 25 73 73 GLY GLY B . n B 2 26 GLY 26 74 74 GLY GLY B . n B 2 27 PHE 27 75 75 PHE PHE B . n B 2 28 PRO 28 76 76 PRO PRO B . n B 2 29 SER 29 77 77 SER SER B . n B 2 30 GLY 30 78 78 GLY GLY B . n B 2 31 ALA 31 79 79 ALA ALA B . n B 2 32 TRP 32 80 80 TRP TRP B . n B 2 33 ASN 33 81 81 ASN ASN B . n B 2 34 PHE 34 82 82 PHE PHE B . n B 2 35 TRP 35 83 83 TRP TRP B . n B 2 36 THR 36 84 84 THR THR B . n B 2 37 LYS 37 85 85 LYS LYS B . n B 2 38 LYS 38 86 86 LYS LYS B . n B 2 39 GLY 39 87 87 GLY GLY B . n B 2 40 LEU 40 88 88 LEU LEU B . n B 2 41 VAL 41 89 89 VAL VAL B . n B 2 42 SER 42 90 90 SER SER B . n B 2 43 GLY 43 91 91 GLY GLY B . n B 2 44 GLY 44 92 92 GLY GLY B . n B 2 45 LEU 45 93 93 LEU LEU B . n B 2 46 TYR 46 94 94 TYR TYR B . n B 2 47 ASN 47 95 95 ASN ASN B . n B 2 48 SER 48 96 96 SER SER B . n B 2 49 HIS 49 97 97 HIS HIS B . n B 2 50 VAL 50 98 98 VAL VAL B . n B 2 51 GLY 51 99 99 GLY GLY B . n B 2 52 CYS 52 100 100 CYS CYS B . n B 2 53 ARG 53 101 101 ARG ARG B . n B 2 54 PRO 54 102 102 PRO PRO B . n B 2 55 TYR 55 103 103 TYR TYR B . n B 2 56 SER 56 104 104 SER SER B . n B 2 57 ILE 57 105 105 ILE ILE B . n B 2 58 PRO 58 106 106 PRO PRO B . n B 2 59 PRO 59 107 107 PRO PRO B . n B 2 60 CYS 60 108 108 CYS CYS B . n B 2 61 GLU 61 109 109 GLU GLU B . n B 2 62 HIS 62 110 110 HIS HIS B . n B 2 63 HIS 63 111 111 HIS HIS B . n B 2 64 VAL 64 112 112 VAL VAL B . n B 2 65 ASN 65 113 113 ASN ASN B . n B 2 66 GLY 66 114 114 GLY GLY B . n B 2 67 SER 67 115 115 SER SER B . n B 2 68 ARG 68 116 116 ARG ARG B . n B 2 69 PRO 69 117 117 PRO PRO B . n B 2 70 PRO 70 118 118 PRO PRO B . n B 2 71 CYS 71 119 119 CYS CYS B . n B 2 72 THR 72 120 120 THR THR B . n B 2 73 GLY 73 121 121 GLY GLY B . n B 2 74 GLU 74 122 122 GLU GLU B . n B 2 75 GLY 75 123 123 GLY GLY B . n B 2 76 ASP 76 124 124 ASP ASP B . n B 2 77 THR 77 125 125 THR THR B . n B 2 78 PRO 78 126 126 PRO PRO B . n B 2 79 LYS 79 127 127 LYS LYS B . n B 2 80 CYS 80 128 128 CYS CYS B . n B 2 81 ASN 81 129 129 ASN ASN B . n B 2 82 LYS 82 130 130 LYS LYS B . n B 2 83 THR 83 131 131 THR THR B . n B 2 84 CYS 84 132 132 CYS CYS B . n B 2 85 GLU 85 133 133 GLU GLU B . n B 2 86 PRO 86 134 134 PRO PRO B . n B 2 87 GLY 87 135 135 GLY GLY B . n B 2 88 TYR 88 136 136 TYR TYR B . n B 2 89 SER 89 137 137 SER SER B . n B 2 90 PRO 90 138 138 PRO PRO B . n B 2 91 SER 91 139 139 SER SER B . n B 2 92 TYR 92 140 140 TYR TYR B . n B 2 93 LYS 93 141 141 LYS LYS B . n B 2 94 GLU 94 142 142 GLU GLU B . n B 2 95 ASP 95 143 143 ASP ASP B . n B 2 96 LYS 96 144 144 LYS LYS B . n B 2 97 HIS 97 145 145 HIS HIS B . n B 2 98 PHE 98 146 146 PHE PHE B . n B 2 99 GLY 99 147 147 GLY GLY B . n B 2 100 CYS 100 148 148 CYS CYS B . n B 2 101 SER 101 149 149 SER SER B . n B 2 102 SER 102 150 150 SER SER B . n B 2 103 TYR 103 151 151 TYR TYR B . n B 2 104 SER 104 152 152 SER SER B . n B 2 105 VAL 105 153 153 VAL VAL B . n B 2 106 ALA 106 154 154 ALA ALA B . n B 2 107 ASN 107 155 155 ASN ASN B . n B 2 108 ASN 108 156 156 ASN ASN B . n B 2 109 GLU 109 157 157 GLU GLU B . n B 2 110 LYS 110 158 158 LYS LYS B . n B 2 111 GLU 111 159 159 GLU GLU B . n B 2 112 ILE 112 160 160 ILE ILE B . n B 2 113 MET 113 161 161 MET MET B . n B 2 114 ALA 114 162 162 ALA ALA B . n B 2 115 GLU 115 163 163 GLU GLU B . n B 2 116 ILE 116 164 164 ILE ILE B . n B 2 117 TYR 117 165 165 TYR TYR B . n B 2 118 LYS 118 166 166 LYS LYS B . n B 2 119 ASN 119 167 167 ASN ASN B . n B 2 120 GLY 120 168 168 GLY GLY B . n B 2 121 PRO 121 169 169 PRO PRO B . n B 2 122 VAL 122 170 170 VAL VAL B . n B 2 123 GLU 123 171 171 GLU GLU B . n B 2 124 GLY 124 172 172 GLY GLY B . n B 2 125 ALA 125 173 173 ALA ALA B . n B 2 126 PHE 126 174 174 PHE PHE B . n B 2 127 SER 127 175 175 SER SER B . n B 2 128 VAL 128 176 176 VAL VAL B . n B 2 129 TYR 129 177 177 TYR TYR B . n B 2 130 SER 130 178 178 SER SER B . n B 2 131 ASP 131 179 179 ASP ASP B . n B 2 132 PHE 132 180 180 PHE PHE B . n B 2 133 LEU 133 181 181 LEU LEU B . n B 2 134 LEU 134 182 182 LEU LEU B . n B 2 135 TYR 135 183 183 TYR TYR B . n B 2 136 LYS 136 184 184 LYS LYS B . n B 2 137 SER 137 185 185 SER SER B . n B 2 138 GLY 138 186 186 GLY GLY B . n B 2 139 VAL 139 187 187 VAL VAL B . n B 2 140 TYR 140 188 188 TYR TYR B . n B 2 141 GLN 141 189 189 GLN GLN B . n B 2 142 HIS 142 190 190 HIS HIS B . n B 2 143 VAL 143 191 191 VAL VAL B . n B 2 144 SER 144 192 192 SER SER B . n B 2 145 GLY 145 193 193 GLY GLY B . n B 2 146 GLU 146 194 194 GLU GLU B . n B 2 147 ILE 147 195 195 ILE ILE B . n B 2 148 MET 148 196 196 MET MET B . n B 2 149 GLY 149 197 197 GLY GLY B . n B 2 150 GLY 150 198 198 GLY GLY B . n B 2 151 HIS 151 199 199 HIS HIS B . n B 2 152 ALA 152 200 200 ALA ALA B . n B 2 153 ILE 153 201 201 ILE ILE B . n B 2 154 ARG 154 202 202 ARG ARG B . n B 2 155 ILE 155 203 203 ILE ILE B . n B 2 156 LEU 156 204 204 LEU LEU B . n B 2 157 GLY 157 205 205 GLY GLY B . n B 2 158 TRP 158 206 206 TRP TRP B . n B 2 159 GLY 159 207 207 GLY GLY B . n B 2 160 VAL 160 208 208 VAL VAL B . n B 2 161 GLU 161 209 209 GLU GLU B . n B 2 162 ASN 162 210 210 ASN ASN B . n B 2 163 GLY 163 211 211 GLY GLY B . n B 2 164 THR 164 212 212 THR THR B . n B 2 165 PRO 165 213 213 PRO PRO B . n B 2 166 TYR 166 214 214 TYR TYR B . n B 2 167 TRP 167 215 215 TRP TRP B . n B 2 168 LEU 168 216 216 LEU LEU B . n B 2 169 VAL 169 217 217 VAL VAL B . n B 2 170 GLY 170 218 218 GLY GLY B . n B 2 171 ASN 171 219 219 ASN ASN B . n B 2 172 SER 172 220 220 SER SER B . n B 2 173 TRP 173 221 221 TRP TRP B . n B 2 174 ASN 174 222 222 ASN ASN B . n B 2 175 THR 175 223 223 THR THR B . n B 2 176 ASP 176 224 224 ASP ASP B . n B 2 177 TRP 177 225 225 TRP TRP B . n B 2 178 GLY 178 226 226 GLY GLY B . n B 2 179 ASP 179 227 227 ASP ASP B . n B 2 180 ASN 180 228 228 ASN ASN B . n B 2 181 GLY 181 229 229 GLY GLY B . n B 2 182 PHE 182 230 230 PHE PHE B . n B 2 183 PHE 183 231 231 PHE PHE B . n B 2 184 LYS 184 232 232 LYS LYS B . n B 2 185 ILE 185 233 233 ILE ILE B . n B 2 186 LEU 186 234 234 LEU LEU B . n B 2 187 ARG 187 235 235 ARG ARG B . n B 2 188 GLY 188 236 236 GLY GLY B . n B 2 189 GLN 189 237 237 GLN GLN B . n B 2 190 ASP 190 238 238 ASP ASP B . n B 2 191 HIS 191 239 239 HIS HIS B . n B 2 192 CYS 192 240 240 CYS CYS B . n B 2 193 GLY 193 241 241 GLY GLY B . n B 2 194 ILE 194 242 242 ILE ILE B . n B 2 195 GLU 195 243 243 GLU GLU B . n B 2 196 SER 196 244 244 SER SER B . n B 2 197 GLU 197 245 245 GLU GLU B . n B 2 198 ILE 198 246 246 ILE ILE B . n B 2 199 VAL 199 247 247 VAL VAL B . n B 2 200 ALA 200 248 248 ALA ALA B . n B 2 201 GLY 201 249 249 GLY GLY B . n B 2 202 MET 202 250 250 MET MET B . n B 2 203 PRO 203 251 251 PRO PRO B . n B 2 204 CYS 204 252 252 CYS CYS B . n B 2 205 THR 205 253 253 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EP2 1 48 48 EP2 EP2 B . D 4 HOH 1 49 49 HOH HOH A . D 4 HOH 2 50 50 HOH HOH A . D 4 HOH 3 51 51 HOH HOH A . D 4 HOH 4 52 52 HOH HOH A . D 4 HOH 5 53 53 HOH HOH A . D 4 HOH 6 54 54 HOH HOH A . D 4 HOH 7 55 55 HOH HOH A . D 4 HOH 8 56 56 HOH HOH A . D 4 HOH 9 57 57 HOH HOH A . D 4 HOH 10 58 58 HOH HOH A . D 4 HOH 11 59 59 HOH HOH A . D 4 HOH 12 60 60 HOH HOH A . D 4 HOH 13 61 61 HOH HOH A . D 4 HOH 14 62 62 HOH HOH A . D 4 HOH 15 63 63 HOH HOH A . D 4 HOH 16 64 64 HOH HOH A . D 4 HOH 17 65 65 HOH HOH A . D 4 HOH 18 66 66 HOH HOH A . D 4 HOH 19 67 67 HOH HOH A . D 4 HOH 20 68 68 HOH HOH A . D 4 HOH 21 69 69 HOH HOH A . D 4 HOH 22 70 70 HOH HOH A . D 4 HOH 23 71 71 HOH HOH A . E 4 HOH 1 257 257 HOH HOH B . E 4 HOH 2 258 258 HOH HOH B . E 4 HOH 3 259 259 HOH HOH B . E 4 HOH 4 260 260 HOH HOH B . E 4 HOH 5 261 261 HOH HOH B . E 4 HOH 6 262 262 HOH HOH B . E 4 HOH 7 263 263 HOH HOH B . E 4 HOH 8 264 264 HOH HOH B . E 4 HOH 9 265 265 HOH HOH B . E 4 HOH 10 266 266 HOH HOH B . E 4 HOH 11 267 267 HOH HOH B . E 4 HOH 12 268 268 HOH HOH B . E 4 HOH 13 269 269 HOH HOH B . E 4 HOH 14 270 270 HOH HOH B . E 4 HOH 15 271 271 HOH HOH B . E 4 HOH 16 272 272 HOH HOH B . E 4 HOH 17 273 273 HOH HOH B . E 4 HOH 18 274 274 HOH HOH B . E 4 HOH 19 275 275 HOH HOH B . E 4 HOH 20 276 276 HOH HOH B . E 4 HOH 21 277 277 HOH HOH B . E 4 HOH 22 278 278 HOH HOH B . E 4 HOH 23 279 279 HOH HOH B . E 4 HOH 24 280 280 HOH HOH B . E 4 HOH 25 281 281 HOH HOH B . E 4 HOH 26 282 282 HOH HOH B . E 4 HOH 27 283 283 HOH HOH B . E 4 HOH 28 284 284 HOH HOH B . E 4 HOH 29 285 285 HOH HOH B . E 4 HOH 30 286 286 HOH HOH B . E 4 HOH 31 287 287 HOH HOH B . E 4 HOH 32 288 288 HOH HOH B . E 4 HOH 33 289 289 HOH HOH B . E 4 HOH 34 290 290 HOH HOH B . E 4 HOH 35 291 291 HOH HOH B . E 4 HOH 36 292 292 HOH HOH B . E 4 HOH 37 293 293 HOH HOH B . E 4 HOH 38 294 294 HOH HOH B . E 4 HOH 39 295 295 HOH HOH B . E 4 HOH 40 296 296 HOH HOH B . E 4 HOH 41 297 297 HOH HOH B . E 4 HOH 42 298 298 HOH HOH B . E 4 HOH 43 299 299 HOH HOH B . E 4 HOH 44 300 300 HOH HOH B . E 4 HOH 45 301 301 HOH HOH B . E 4 HOH 46 302 302 HOH HOH B . E 4 HOH 47 303 303 HOH HOH B . E 4 HOH 48 304 304 HOH HOH B . E 4 HOH 49 305 305 HOH HOH B . E 4 HOH 50 306 306 HOH HOH B . E 4 HOH 51 307 307 HOH HOH B . E 4 HOH 52 308 308 HOH HOH B . E 4 HOH 53 309 309 HOH HOH B . E 4 HOH 54 310 310 HOH HOH B . E 4 HOH 55 311 311 HOH HOH B . E 4 HOH 56 312 312 HOH HOH B . E 4 HOH 57 313 313 HOH HOH B . E 4 HOH 58 314 314 HOH HOH B . E 4 HOH 59 315 315 HOH HOH B . E 4 HOH 60 316 316 HOH HOH B . E 4 HOH 61 317 317 HOH HOH B . E 4 HOH 62 318 318 HOH HOH B . E 4 HOH 63 319 319 HOH HOH B . E 4 HOH 64 320 320 HOH HOH B . E 4 HOH 65 321 321 HOH HOH B . E 4 HOH 66 322 322 HOH HOH B . E 4 HOH 67 323 323 HOH HOH B . E 4 HOH 68 324 324 HOH HOH B . E 4 HOH 69 325 325 HOH HOH B . E 4 HOH 70 326 326 HOH HOH B . E 4 HOH 71 327 327 HOH HOH B . E 4 HOH 72 328 328 HOH HOH B . E 4 HOH 73 329 329 HOH HOH B . E 4 HOH 74 330 330 HOH HOH B . E 4 HOH 75 331 331 HOH HOH B . E 4 HOH 76 332 332 HOH HOH B . E 4 HOH 77 333 333 HOH HOH B . E 4 HOH 78 334 334 HOH HOH B . E 4 HOH 79 335 335 HOH HOH B . E 4 HOH 80 336 336 HOH HOH B . E 4 HOH 81 337 337 HOH HOH B . E 4 HOH 82 338 338 HOH HOH B . E 4 HOH 83 339 339 HOH HOH B . E 4 HOH 84 340 340 HOH HOH B . E 4 HOH 85 341 341 HOH HOH B . E 4 HOH 86 342 342 HOH HOH B . E 4 HOH 87 343 343 HOH HOH B . E 4 HOH 88 344 344 HOH HOH B . E 4 HOH 89 345 345 HOH HOH B . E 4 HOH 90 346 346 HOH HOH B . E 4 HOH 91 347 347 HOH HOH B . E 4 HOH 92 348 348 HOH HOH B . E 4 HOH 93 349 349 HOH HOH B . E 4 HOH 94 350 350 HOH HOH B . E 4 HOH 95 351 351 HOH HOH B . E 4 HOH 96 352 352 HOH HOH B . E 4 HOH 97 353 353 HOH HOH B . E 4 HOH 98 354 354 HOH HOH B . E 4 HOH 99 355 355 HOH HOH B . E 4 HOH 100 356 356 HOH HOH B . E 4 HOH 101 357 357 HOH HOH B . E 4 HOH 102 358 358 HOH HOH B . E 4 HOH 103 359 359 HOH HOH B . E 4 HOH 104 360 360 HOH HOH B . E 4 HOH 105 361 361 HOH HOH B . E 4 HOH 106 362 362 HOH HOH B . E 4 HOH 107 363 363 HOH HOH B . E 4 HOH 108 364 364 HOH HOH B . E 4 HOH 109 365 365 HOH HOH B . E 4 HOH 110 366 366 HOH HOH B . E 4 HOH 111 367 367 HOH HOH B . E 4 HOH 112 368 368 HOH HOH B . E 4 HOH 113 369 369 HOH HOH B . E 4 HOH 114 370 370 HOH HOH B . E 4 HOH 115 371 371 HOH HOH B . E 4 HOH 116 372 372 HOH HOH B . E 4 HOH 117 373 373 HOH HOH B . E 4 HOH 118 374 374 HOH HOH B . E 4 HOH 119 375 375 HOH HOH B . E 4 HOH 120 376 376 HOH HOH B . E 4 HOH 121 377 377 HOH HOH B . E 4 HOH 122 378 378 HOH HOH B . E 4 HOH 123 379 379 HOH HOH B . E 4 HOH 124 380 380 HOH HOH B . E 4 HOH 125 381 381 HOH HOH B . E 4 HOH 126 382 382 HOH HOH B . E 4 HOH 127 383 383 HOH HOH B . E 4 HOH 128 384 384 HOH HOH B . E 4 HOH 129 385 385 HOH HOH B . E 4 HOH 130 386 386 HOH HOH B . E 4 HOH 131 387 387 HOH HOH B . E 4 HOH 132 388 388 HOH HOH B . E 4 HOH 133 389 389 HOH HOH B . E 4 HOH 134 390 390 HOH HOH B . E 4 HOH 135 391 391 HOH HOH B . E 4 HOH 136 392 392 HOH HOH B . E 4 HOH 137 393 393 HOH HOH B . E 4 HOH 138 394 394 HOH HOH B . E 4 HOH 139 395 395 HOH HOH B . E 4 HOH 140 396 396 HOH HOH B . E 4 HOH 141 397 397 HOH HOH B . E 4 HOH 142 398 398 HOH HOH B . E 4 HOH 143 399 399 HOH HOH B . E 4 HOH 144 400 400 HOH HOH B . E 4 HOH 145 401 401 HOH HOH B . E 4 HOH 146 402 402 HOH HOH B . E 4 HOH 147 403 403 HOH HOH B . E 4 HOH 148 404 404 HOH HOH B . E 4 HOH 149 405 405 HOH HOH B . E 4 HOH 150 406 406 HOH HOH B . E 4 HOH 151 407 407 HOH HOH B . E 4 HOH 152 408 408 HOH HOH B . E 4 HOH 153 409 409 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 3 ? CD ? A GLU 3 CD 2 1 Y 0 A GLU 3 ? OE1 ? A GLU 3 OE1 3 1 Y 0 A GLU 3 ? OE2 ? A GLU 3 OE2 4 1 Y 0 A ASN 47 ? CB ? A ASN 47 CB 5 1 Y 0 A ASN 47 ? CG ? A ASN 47 CG 6 1 Y 0 A ASN 47 ? OD1 ? A ASN 47 OD1 7 1 Y 0 A ASN 47 ? ND2 ? A ASN 47 ND2 8 1 Y 0 B LYS 85 ? CE ? B LYS 37 CE 9 1 Y 0 B LYS 85 ? NZ ? B LYS 37 NZ 10 1 Y 0 B GLU 122 ? OE1 ? B GLU 74 OE1 11 1 Y 0 B GLU 122 ? OE2 ? B GLU 74 OE2 12 1 Y 0 B ASN 129 ? OD1 ? B ASN 81 OD1 13 1 Y 0 B ASN 129 ? ND2 ? B ASN 81 ND2 14 1 Y 0 B LYS 158 ? CE ? B LYS 110 CE 15 1 Y 0 B LYS 158 ? NZ ? B LYS 110 NZ 16 1 Y 0 B LYS 166 ? NZ ? B LYS 118 NZ 17 1 Y 0 B LYS 184 ? NZ ? B LYS 136 NZ 18 1 Y 0 B GLU 194 ? CD ? B GLU 146 CD 19 1 Y 0 B GLU 194 ? OE1 ? B GLU 146 OE1 20 1 Y 0 B GLU 194 ? OE2 ? B GLU 146 OE2 21 1 Y 0 B THR 253 ? OG1 ? B THR 205 OG1 22 1 Y 0 B THR 253 ? CG2 ? B THR 205 CG2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAIN refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 EPMR phasing . ? 4 # _cell.entry_id 1SP4 _cell.length_a 73.064 _cell.length_b 73.064 _cell.length_c 141.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1SP4 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1SP4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.41 _exptl_crystal.density_percent_sol 63.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pdbx_details 'pH 3.5' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-01-01 _diffrn_detector.details 'YALE MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SP4 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.200 _reflns.number_obs 20320 _reflns.number_all ? _reflns.percent_possible_obs 96 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 77 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1SP4 _refine.ls_number_reflns_obs 19372 _refine.ls_number_reflns_all 19372 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 1 _refine.aniso_B[2][2] 1 _refine.aniso_B[3][3] 1 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][3] 0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1926 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 2143 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d 0.0135 ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg 1.635 ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1SP4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SP4 _struct.title ;Crystal structure of NS-134 in complex with bovine cathepsin B: a two headed epoxysuccinyl inhibitor extends along the whole active site cleft ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SP4 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'cathepsin B, epoxysuccinyl-based inhibitors, inhibitor design, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CATB_BOVIN P07688 1 LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNG 80 ? 2 UNP CATB_BOVIN P07688 2 ;RVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKC NKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMPCT ; 128 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SP4 A 1 ? 48 ? P07688 80 ? 127 ? 1 48 2 2 1SP4 B 1 ? 205 ? P07688 128 ? 332 ? 49 253 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6100 ? 1 MORE -34 ? 1 'SSA (A^2)' 10930 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 7 ? TRP A 11 ? ALA A 7 TRP A 11 1 ? 5 HELX_P HELX_P2 2 CYS A 14 ? GLU A 19 ? CYS A 14 GLU A 19 5 ? 6 HELX_P HELX_P3 3 SER A 28 ? HIS A 45 ? SER A 28 HIS A 45 1 ? 18 HELX_P HELX_P4 4 SER B 7 ? CYS B 15 ? SER B 55 CYS B 63 1 ? 9 HELX_P HELX_P5 5 GLY B 16 ? GLY B 20 ? GLY B 64 GLY B 68 5 ? 5 HELX_P HELX_P6 6 ASP B 21 ? GLY B 25 ? ASP B 69 GLY B 73 5 ? 5 HELX_P HELX_P7 7 PHE B 27 ? LYS B 38 ? PHE B 75 LYS B 86 1 ? 12 HELX_P HELX_P8 8 TYR B 92 ? LYS B 96 ? TYR B 140 LYS B 144 5 ? 5 HELX_P HELX_P9 9 ASN B 108 ? GLY B 120 ? ASN B 156 GLY B 168 1 ? 13 HELX_P HELX_P10 10 ASP B 131 ? LEU B 133 ? ASP B 179 LEU B 181 5 ? 3 HELX_P HELX_P11 11 ASP B 190 ? ILE B 194 ? ASP B 238 ILE B 242 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 14 A CYS 43 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 B CYS 23 SG ? ? A CYS 26 B CYS 71 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 62 B CYS 128 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf4 disulf ? ? B CYS 15 SG ? ? ? 1_555 B CYS 19 SG ? ? B CYS 63 B CYS 67 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf5 disulf ? ? B CYS 52 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 100 B CYS 132 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf6 disulf ? ? B CYS 60 SG ? ? ? 1_555 B CYS 71 SG ? ? B CYS 108 B CYS 119 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf7 disulf ? ? B CYS 100 SG ? ? ? 1_555 B CYS 204 SG ? ? B CYS 148 B CYS 252 1_555 ? ? ? ? ? ? ? 2.041 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 14 ? CYS A 43 ? CYS A 14 ? 1_555 CYS A 43 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 26 ? CYS B 23 ? CYS A 26 ? 1_555 CYS B 71 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 14 ? CYS B 80 ? CYS B 62 ? 1_555 CYS B 128 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 15 ? CYS B 19 ? CYS B 63 ? 1_555 CYS B 67 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 52 ? CYS B 84 ? CYS B 100 ? 1_555 CYS B 132 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 60 ? CYS B 71 ? CYS B 108 ? 1_555 CYS B 119 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 100 ? CYS B 204 ? CYS B 148 ? 1_555 CYS B 252 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 89 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 137 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 90 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 138 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 5 ? ASP A 6 ? PHE A 5 ASP A 6 A 2 ILE B 147 ? GLU B 161 ? ILE B 195 GLU B 209 A 3 VAL B 122 ? TYR B 129 ? VAL B 170 TYR B 177 B 1 PHE A 5 ? ASP A 6 ? PHE A 5 ASP A 6 B 2 ILE B 147 ? GLU B 161 ? ILE B 195 GLU B 209 B 3 THR B 164 ? GLY B 170 ? THR B 212 GLY B 218 B 4 PHE B 182 ? LEU B 186 ? PHE B 230 LEU B 234 B 5 VAL B 139 ? TYR B 140 ? VAL B 187 TYR B 188 C 1 GLY B 99 ? SER B 104 ? GLY B 147 SER B 152 C 2 VAL B 199 ? PRO B 203 ? VAL B 247 PRO B 251 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 5 ? N PHE A 5 O TRP B 158 ? O TRP B 206 A 2 3 O GLY B 149 ? O GLY B 197 N VAL B 128 ? N VAL B 176 B 1 2 N PHE A 5 ? N PHE A 5 O TRP B 158 ? O TRP B 206 B 2 3 N ARG B 154 ? N ARG B 202 O GLY B 170 ? O GLY B 218 B 3 4 N VAL B 169 ? N VAL B 217 O PHE B 183 ? O PHE B 231 B 4 5 O LYS B 184 ? O LYS B 232 N TYR B 140 ? N TYR B 188 C 1 2 N CYS B 100 ? N CYS B 148 O MET B 202 ? O MET B 250 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id EP2 _struct_site.pdbx_auth_seq_id 48 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 24 _struct_site.details 'BINDING SITE FOR RESIDUE EP2 B 48' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 GLN A 23 ? GLN A 23 . ? 1_555 ? 2 AC1 24 GLY A 24 ? GLY A 24 . ? 1_555 ? 3 AC1 24 GLY A 27 ? GLY A 27 . ? 1_555 ? 4 AC1 24 SER A 28 ? SER A 28 . ? 1_555 ? 5 AC1 24 CYS A 29 ? CYS A 29 . ? 1_555 ? 6 AC1 24 TRP A 30 ? TRP A 30 . ? 1_555 ? 7 AC1 24 GLY B 25 ? GLY B 73 . ? 1_555 ? 8 AC1 24 GLY B 26 ? GLY B 74 . ? 1_555 ? 9 AC1 24 PRO B 28 ? PRO B 76 . ? 1_555 ? 10 AC1 24 HIS B 62 ? HIS B 110 . ? 1_555 ? 11 AC1 24 HIS B 63 ? HIS B 111 . ? 1_555 ? 12 AC1 24 ALA B 125 ? ALA B 173 . ? 7_556 ? 13 AC1 24 ALA B 125 ? ALA B 173 . ? 1_555 ? 14 AC1 24 PHE B 126 ? PHE B 174 . ? 7_556 ? 15 AC1 24 SER B 127 ? SER B 175 . ? 7_556 ? 16 AC1 24 GLY B 150 ? GLY B 198 . ? 1_555 ? 17 AC1 24 HIS B 151 ? HIS B 199 . ? 1_555 ? 18 AC1 24 TRP B 173 ? TRP B 221 . ? 1_555 ? 19 AC1 24 GLY B 193 ? GLY B 241 . ? 7_556 ? 20 AC1 24 SER B 196 ? SER B 244 . ? 7_556 ? 21 AC1 24 GLU B 197 ? GLU B 245 . ? 7_556 ? 22 AC1 24 HOH E . ? HOH B 291 . ? 1_555 ? 23 AC1 24 HOH E . ? HOH B 327 . ? 1_555 ? 24 AC1 24 HOH E . ? HOH B 354 . ? 1_555 ? # _pdbx_entry_details.entry_id 1SP4 _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR IS A TWO HEADED EPOXYSUCCINYL INHIBITOR. THE EPOXY GROUP OPENS UPON REACTION WITH THE ENZYME. THE INHIBITOR HAS TWO C-TERMINI AND NO N TERMINUS. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 B GLU 66 ? ? O B HOH 366 ? ? 1.23 2 1 CD B GLU 66 ? ? O B HOH 366 ? ? 1.38 3 1 SG A CYS 29 ? ? C31 B EP2 48 ? ? 1.79 4 1 OE2 B GLU 66 ? ? O B HOH 366 ? ? 1.95 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 330 ? ? 1_555 O B HOH 377 ? ? 7_556 1.90 2 1 OD1 B ASN 129 ? ? 1_555 O A HOH 70 ? ? 5_555 1.91 3 1 O B HOH 363 ? ? 1_555 O B HOH 377 ? ? 7_556 1.95 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A CYS 14 ? ? N A PRO 15 ? ? CA A PRO 15 ? ? 129.46 119.30 10.16 1.50 Y 2 1 N A ASN 47 ? ? CA A ASN 47 ? ? C A ASN 47 ? ? 128.01 111.00 17.01 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 45 ? ? -109.13 65.15 2 1 ASN A 47 ? ? 69.72 149.45 3 1 ASN B 95 ? ? 35.62 58.06 4 1 GLU B 122 ? ? 40.46 123.36 5 1 ASN B 222 ? ? 72.50 179.47 # _pdbx_molecule_features.prd_id PRD_000444 _pdbx_molecule_features.name 'NS-134 TWO HEADED EPOXYSUCCINYL INHIBITOR' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000444 _pdbx_molecule.asym_id C # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE PROTEIN IS POSTRANSLATIONALLY MODIFIED. AFTER THE ENZYME IS PROCESSED, THE PEPTIDE BOND BETWEEN THE RESIDUES 48 49 IS CLEAVED. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 0 A GLY 48 ? A GLY 48 2 1 Y 0 B ARG 49 ? B ARG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EP2 CB C N N 88 EP2 OXT O N N 89 EP2 N N N N 90 EP2 CA C N N 91 EP2 C C N N 92 EP2 O O N N 93 EP2 N1 N N N 94 EP2 CA1 C N N 95 EP2 C1 C N N 96 EP2 O1 O N N 97 EP2 N2 N N N 98 EP2 CA2 C N S 99 EP2 C2 C N N 100 EP2 O2 O N N 101 EP2 CB1 C N N 102 EP2 CG C N N 103 EP2 CD1 C N N 104 EP2 CD2 C N N 105 EP2 O11 O N N 106 EP2 C11 C N N 107 EP2 C21 C N S 108 EP2 O21 O N N 109 EP2 C31 C N S 110 EP2 C41 C N N 111 EP2 O41 O N N 112 EP2 N3 N N N 113 EP2 CA3 C N S 114 EP2 C3 C N N 115 EP2 O3 O N N 116 EP2 CB2 C N N 117 EP2 CG1 C N N 118 EP2 CD11 C N N 119 EP2 CD21 C N N 120 EP2 N4 N N N 121 EP2 CA4 C N S 122 EP2 C4 C N N 123 EP2 O4 O N N 124 EP2 CB3 C N N 125 EP2 CG2 C N N 126 EP2 CD C N N 127 EP2 OXT1 O N N 128 EP2 HB1 H N N 129 EP2 HB2 H N N 130 EP2 HB3 H N N 131 EP2 H H N N 132 EP2 HA1 H N N 133 EP2 HA2 H N N 134 EP2 H1 H N N 135 EP2 HA21 H N N 136 EP2 HA3 H N N 137 EP2 H2 H N N 138 EP2 HA H N N 139 EP2 HB21 H N N 140 EP2 HB31 H N N 141 EP2 HG H N N 142 EP2 HD11 H N N 143 EP2 HD12 H N N 144 EP2 HD13 H N N 145 EP2 HD21 H N N 146 EP2 HD22 H N N 147 EP2 HD23 H N N 148 EP2 H21 H N N 149 EP2 H31 H N N 150 EP2 H3 H N N 151 EP2 HA4 H N N 152 EP2 HB22 H N N 153 EP2 HB32 H N N 154 EP2 HG1 H N N 155 EP2 HD14 H N N 156 EP2 HD15 H N N 157 EP2 HD16 H N N 158 EP2 HD24 H N N 159 EP2 HD25 H N N 160 EP2 HD26 H N N 161 EP2 HA5 H N N 162 EP2 HB23 H N N 163 EP2 HB33 H N N 164 EP2 HG2 H N N 165 EP2 HG3 H N N 166 EP2 HD2 H N N 167 EP2 HD3 H N N 168 EP2 HXT H N N 169 GLN N N N N 170 GLN CA C N S 171 GLN C C N N 172 GLN O O N N 173 GLN CB C N N 174 GLN CG C N N 175 GLN CD C N N 176 GLN OE1 O N N 177 GLN NE2 N N N 178 GLN OXT O N N 179 GLN H H N N 180 GLN H2 H N N 181 GLN HA H N N 182 GLN HB2 H N N 183 GLN HB3 H N N 184 GLN HG2 H N N 185 GLN HG3 H N N 186 GLN HE21 H N N 187 GLN HE22 H N N 188 GLN HXT H N N 189 GLU N N N N 190 GLU CA C N S 191 GLU C C N N 192 GLU O O N N 193 GLU CB C N N 194 GLU CG C N N 195 GLU CD C N N 196 GLU OE1 O N N 197 GLU OE2 O N N 198 GLU OXT O N N 199 GLU H H N N 200 GLU H2 H N N 201 GLU HA H N N 202 GLU HB2 H N N 203 GLU HB3 H N N 204 GLU HG2 H N N 205 GLU HG3 H N N 206 GLU HE2 H N N 207 GLU HXT H N N 208 GLY N N N N 209 GLY CA C N N 210 GLY C C N N 211 GLY O O N N 212 GLY OXT O N N 213 GLY H H N N 214 GLY H2 H N N 215 GLY HA2 H N N 216 GLY HA3 H N N 217 GLY HXT H N N 218 HIS N N N N 219 HIS CA C N S 220 HIS C C N N 221 HIS O O N N 222 HIS CB C N N 223 HIS CG C Y N 224 HIS ND1 N Y N 225 HIS CD2 C Y N 226 HIS CE1 C Y N 227 HIS NE2 N Y N 228 HIS OXT O N N 229 HIS H H N N 230 HIS H2 H N N 231 HIS HA H N N 232 HIS HB2 H N N 233 HIS HB3 H N N 234 HIS HD1 H N N 235 HIS HD2 H N N 236 HIS HE1 H N N 237 HIS HE2 H N N 238 HIS HXT H N N 239 HOH O O N N 240 HOH H1 H N N 241 HOH H2 H N N 242 ILE N N N N 243 ILE CA C N S 244 ILE C C N N 245 ILE O O N N 246 ILE CB C N S 247 ILE CG1 C N N 248 ILE CG2 C N N 249 ILE CD1 C N N 250 ILE OXT O N N 251 ILE H H N N 252 ILE H2 H N N 253 ILE HA H N N 254 ILE HB H N N 255 ILE HG12 H N N 256 ILE HG13 H N N 257 ILE HG21 H N N 258 ILE HG22 H N N 259 ILE HG23 H N N 260 ILE HD11 H N N 261 ILE HD12 H N N 262 ILE HD13 H N N 263 ILE HXT H N N 264 LEU N N N N 265 LEU CA C N S 266 LEU C C N N 267 LEU O O N N 268 LEU CB C N N 269 LEU CG C N N 270 LEU CD1 C N N 271 LEU CD2 C N N 272 LEU OXT O N N 273 LEU H H N N 274 LEU H2 H N N 275 LEU HA H N N 276 LEU HB2 H N N 277 LEU HB3 H N N 278 LEU HG H N N 279 LEU HD11 H N N 280 LEU HD12 H N N 281 LEU HD13 H N N 282 LEU HD21 H N N 283 LEU HD22 H N N 284 LEU HD23 H N N 285 LEU HXT H N N 286 LYS N N N N 287 LYS CA C N S 288 LYS C C N N 289 LYS O O N N 290 LYS CB C N N 291 LYS CG C N N 292 LYS CD C N N 293 LYS CE C N N 294 LYS NZ N N N 295 LYS OXT O N N 296 LYS H H N N 297 LYS H2 H N N 298 LYS HA H N N 299 LYS HB2 H N N 300 LYS HB3 H N N 301 LYS HG2 H N N 302 LYS HG3 H N N 303 LYS HD2 H N N 304 LYS HD3 H N N 305 LYS HE2 H N N 306 LYS HE3 H N N 307 LYS HZ1 H N N 308 LYS HZ2 H N N 309 LYS HZ3 H N N 310 LYS HXT H N N 311 MET N N N N 312 MET CA C N S 313 MET C C N N 314 MET O O N N 315 MET CB C N N 316 MET CG C N N 317 MET SD S N N 318 MET CE C N N 319 MET OXT O N N 320 MET H H N N 321 MET H2 H N N 322 MET HA H N N 323 MET HB2 H N N 324 MET HB3 H N N 325 MET HG2 H N N 326 MET HG3 H N N 327 MET HE1 H N N 328 MET HE2 H N N 329 MET HE3 H N N 330 MET HXT H N N 331 PHE N N N N 332 PHE CA C N S 333 PHE C C N N 334 PHE O O N N 335 PHE CB C N N 336 PHE CG C Y N 337 PHE CD1 C Y N 338 PHE CD2 C Y N 339 PHE CE1 C Y N 340 PHE CE2 C Y N 341 PHE CZ C Y N 342 PHE OXT O N N 343 PHE H H N N 344 PHE H2 H N N 345 PHE HA H N N 346 PHE HB2 H N N 347 PHE HB3 H N N 348 PHE HD1 H N N 349 PHE HD2 H N N 350 PHE HE1 H N N 351 PHE HE2 H N N 352 PHE HZ H N N 353 PHE HXT H N N 354 PRO N N N N 355 PRO CA C N S 356 PRO C C N N 357 PRO O O N N 358 PRO CB C N N 359 PRO CG C N N 360 PRO CD C N N 361 PRO OXT O N N 362 PRO H H N N 363 PRO HA H N N 364 PRO HB2 H N N 365 PRO HB3 H N N 366 PRO HG2 H N N 367 PRO HG3 H N N 368 PRO HD2 H N N 369 PRO HD3 H N N 370 PRO HXT H N N 371 SER N N N N 372 SER CA C N S 373 SER C C N N 374 SER O O N N 375 SER CB C N N 376 SER OG O N N 377 SER OXT O N N 378 SER H H N N 379 SER H2 H N N 380 SER HA H N N 381 SER HB2 H N N 382 SER HB3 H N N 383 SER HG H N N 384 SER HXT H N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EP2 CB OXT sing N N 83 EP2 CB HB1 sing N N 84 EP2 CB HB2 sing N N 85 EP2 CB HB3 sing N N 86 EP2 OXT C sing N N 87 EP2 N CA sing N N 88 EP2 N H sing N N 89 EP2 N C1 sing N N 90 EP2 CA C sing N N 91 EP2 CA HA1 sing N N 92 EP2 CA HA2 sing N N 93 EP2 C O doub N N 94 EP2 N1 CA1 sing N N 95 EP2 N1 H1 sing N N 96 EP2 N1 C2 sing N N 97 EP2 CA1 C1 sing N N 98 EP2 CA1 HA21 sing N N 99 EP2 CA1 HA3 sing N N 100 EP2 C1 O1 doub N N 101 EP2 N2 CA2 sing N N 102 EP2 N2 H2 sing N N 103 EP2 N2 C11 sing N N 104 EP2 CA2 C2 sing N N 105 EP2 CA2 CB1 sing N N 106 EP2 CA2 HA sing N N 107 EP2 C2 O2 doub N N 108 EP2 CB1 CG sing N N 109 EP2 CB1 HB21 sing N N 110 EP2 CB1 HB31 sing N N 111 EP2 CG CD1 sing N N 112 EP2 CG CD2 sing N N 113 EP2 CG HG sing N N 114 EP2 CD1 HD11 sing N N 115 EP2 CD1 HD12 sing N N 116 EP2 CD1 HD13 sing N N 117 EP2 CD2 HD21 sing N N 118 EP2 CD2 HD22 sing N N 119 EP2 CD2 HD23 sing N N 120 EP2 N3 CA3 sing N N 121 EP2 N3 H3 sing N N 122 EP2 N3 C41 sing N N 123 EP2 CA3 C3 sing N N 124 EP2 CA3 CB2 sing N N 125 EP2 CA3 HA4 sing N N 126 EP2 C3 O3 doub N N 127 EP2 C3 N4 sing N N 128 EP2 CB2 CG1 sing N N 129 EP2 CB2 HB22 sing N N 130 EP2 CB2 HB32 sing N N 131 EP2 CG1 CD11 sing N N 132 EP2 CG1 CD21 sing N N 133 EP2 CG1 HG1 sing N N 134 EP2 CD11 HD14 sing N N 135 EP2 CD11 HD15 sing N N 136 EP2 CD11 HD16 sing N N 137 EP2 CD21 HD24 sing N N 138 EP2 CD21 HD25 sing N N 139 EP2 CD21 HD26 sing N N 140 EP2 N4 CA4 sing N N 141 EP2 N4 CD sing N N 142 EP2 CA4 C4 sing N N 143 EP2 CA4 CB3 sing N N 144 EP2 CA4 HA5 sing N N 145 EP2 C4 O4 doub N N 146 EP2 C4 OXT1 sing N N 147 EP2 CB3 CG2 sing N N 148 EP2 CB3 HB23 sing N N 149 EP2 CB3 HB33 sing N N 150 EP2 CG2 CD sing N N 151 EP2 CG2 HG2 sing N N 152 EP2 CG2 HG3 sing N N 153 EP2 CD HD2 sing N N 154 EP2 CD HD3 sing N N 155 EP2 OXT1 HXT sing N N 156 EP2 O11 C11 doub N N 157 EP2 C11 C21 sing N N 158 EP2 C21 O21 sing N N 159 EP2 C21 C31 sing N N 160 EP2 C21 H21 sing N N 161 EP2 O21 C31 sing N N 162 EP2 C31 C41 sing N N 163 EP2 C31 H31 sing N N 164 EP2 C41 O41 doub N N 165 GLN N CA sing N N 166 GLN N H sing N N 167 GLN N H2 sing N N 168 GLN CA C sing N N 169 GLN CA CB sing N N 170 GLN CA HA sing N N 171 GLN C O doub N N 172 GLN C OXT sing N N 173 GLN CB CG sing N N 174 GLN CB HB2 sing N N 175 GLN CB HB3 sing N N 176 GLN CG CD sing N N 177 GLN CG HG2 sing N N 178 GLN CG HG3 sing N N 179 GLN CD OE1 doub N N 180 GLN CD NE2 sing N N 181 GLN NE2 HE21 sing N N 182 GLN NE2 HE22 sing N N 183 GLN OXT HXT sing N N 184 GLU N CA sing N N 185 GLU N H sing N N 186 GLU N H2 sing N N 187 GLU CA C sing N N 188 GLU CA CB sing N N 189 GLU CA HA sing N N 190 GLU C O doub N N 191 GLU C OXT sing N N 192 GLU CB CG sing N N 193 GLU CB HB2 sing N N 194 GLU CB HB3 sing N N 195 GLU CG CD sing N N 196 GLU CG HG2 sing N N 197 GLU CG HG3 sing N N 198 GLU CD OE1 doub N N 199 GLU CD OE2 sing N N 200 GLU OE2 HE2 sing N N 201 GLU OXT HXT sing N N 202 GLY N CA sing N N 203 GLY N H sing N N 204 GLY N H2 sing N N 205 GLY CA C sing N N 206 GLY CA HA2 sing N N 207 GLY CA HA3 sing N N 208 GLY C O doub N N 209 GLY C OXT sing N N 210 GLY OXT HXT sing N N 211 HIS N CA sing N N 212 HIS N H sing N N 213 HIS N H2 sing N N 214 HIS CA C sing N N 215 HIS CA CB sing N N 216 HIS CA HA sing N N 217 HIS C O doub N N 218 HIS C OXT sing N N 219 HIS CB CG sing N N 220 HIS CB HB2 sing N N 221 HIS CB HB3 sing N N 222 HIS CG ND1 sing Y N 223 HIS CG CD2 doub Y N 224 HIS ND1 CE1 doub Y N 225 HIS ND1 HD1 sing N N 226 HIS CD2 NE2 sing Y N 227 HIS CD2 HD2 sing N N 228 HIS CE1 NE2 sing Y N 229 HIS CE1 HE1 sing N N 230 HIS NE2 HE2 sing N N 231 HIS OXT HXT sing N N 232 HOH O H1 sing N N 233 HOH O H2 sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 MET N CA sing N N 301 MET N H sing N N 302 MET N H2 sing N N 303 MET CA C sing N N 304 MET CA CB sing N N 305 MET CA HA sing N N 306 MET C O doub N N 307 MET C OXT sing N N 308 MET CB CG sing N N 309 MET CB HB2 sing N N 310 MET CB HB3 sing N N 311 MET CG SD sing N N 312 MET CG HG2 sing N N 313 MET CG HG3 sing N N 314 MET SD CE sing N N 315 MET CE HE1 sing N N 316 MET CE HE2 sing N N 317 MET CE HE3 sing N N 318 MET OXT HXT sing N N 319 PHE N CA sing N N 320 PHE N H sing N N 321 PHE N H2 sing N N 322 PHE CA C sing N N 323 PHE CA CB sing N N 324 PHE CA HA sing N N 325 PHE C O doub N N 326 PHE C OXT sing N N 327 PHE CB CG sing N N 328 PHE CB HB2 sing N N 329 PHE CB HB3 sing N N 330 PHE CG CD1 doub Y N 331 PHE CG CD2 sing Y N 332 PHE CD1 CE1 sing Y N 333 PHE CD1 HD1 sing N N 334 PHE CD2 CE2 doub Y N 335 PHE CD2 HD2 sing N N 336 PHE CE1 CZ doub Y N 337 PHE CE1 HE1 sing N N 338 PHE CE2 CZ sing Y N 339 PHE CE2 HE2 sing N N 340 PHE CZ HZ sing N N 341 PHE OXT HXT sing N N 342 PRO N CA sing N N 343 PRO N CD sing N N 344 PRO N H sing N N 345 PRO CA C sing N N 346 PRO CA CB sing N N 347 PRO CA HA sing N N 348 PRO C O doub N N 349 PRO C OXT sing N N 350 PRO CB CG sing N N 351 PRO CB HB2 sing N N 352 PRO CB HB3 sing N N 353 PRO CG CD sing N N 354 PRO CG HG2 sing N N 355 PRO CG HG3 sing N N 356 PRO CD HD2 sing N N 357 PRO CD HD3 sing N N 358 PRO OXT HXT sing N N 359 SER N CA sing N N 360 SER N H sing N N 361 SER N H2 sing N N 362 SER CA C sing N N 363 SER CA CB sing N N 364 SER CA HA sing N N 365 SER C O doub N N 366 SER C OXT sing N N 367 SER CB OG sing N N 368 SER CB HB2 sing N N 369 SER CB HB3 sing N N 370 SER OG HG sing N N 371 SER OXT HXT sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 VAL N CA sing N N 441 VAL N H sing N N 442 VAL N H2 sing N N 443 VAL CA C sing N N 444 VAL CA CB sing N N 445 VAL CA HA sing N N 446 VAL C O doub N N 447 VAL C OXT sing N N 448 VAL CB CG1 sing N N 449 VAL CB CG2 sing N N 450 VAL CB HB sing N N 451 VAL CG1 HG11 sing N N 452 VAL CG1 HG12 sing N N 453 VAL CG1 HG13 sing N N 454 VAL CG2 HG21 sing N N 455 VAL CG2 HG22 sing N N 456 VAL CG2 HG23 sing N N 457 VAL OXT HXT sing N N 458 # _atom_sites.entry_id 1SP4 _atom_sites.fract_transf_matrix[1][1] 0.013687 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013687 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007044 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_