data_1SPP # _entry.id 1SPP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SPP pdb_00001spp 10.2210/pdb1spp/pdb WWPDB D_1000176465 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-06-24 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_entry_details 5 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SPP _pdbx_database_status.recvd_initial_deposition_date 1997-06-19 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Romero, A.' 1 'Romao, M.J.' 2 'Varela, P.F.' 3 'Kolln, I.' 4 'Dias, J.M.' 5 'Carvalho, A.L.' 6 'Sanz, L.' 7 'Topfer-Petersen, E.' 8 'Calvete, J.J.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The crystal structures of two spermadhesins reveal the CUB domain fold.' Nat.Struct.Biol. 4 783 788 1997 NSBIEW US 1072-8368 2024 ? 9334740 10.1038/nsb1097-783 1 ;Crystallization and Preliminary X-Ray Diffraction Analysis of Boar Seminal Plasma Spermadhesin Psp-I/Psp-II, a Heterodimer of Two Cub Domains ; 'FEBS Lett.' 382 15 ? 1996 FEBLAL NE 0014-5793 0165 ? ? ? 2 ;Boar Spermadhesin Psp-II: Location of Posttranslational Modifications, Heterodimer Formation with Psp-I Glycoforms and Effect of Dimerization on the Ligand-Binding Capabilities of the Subunits ; 'FEBS Lett.' 365 179 ? 1995 FEBLAL NE 0014-5793 0165 ? ? ? 3 'The Cub Domain. A Widespread Module in Developmentally Regulated Proteins' J.Mol.Biol. 231 539 ? 1993 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Romero, A.' 1 ? primary 'Romao, M.J.' 2 ? primary 'Varela, P.F.' 3 ? primary 'Kolln, I.' 4 ? primary 'Dias, J.M.' 5 ? primary 'Carvalho, A.L.' 6 ? primary 'Sanz, L.' 7 ? primary 'Topfer-Petersen, E.' 8 ? primary 'Calvete, J.J.' 9 ? 1 'Romero, A.' 10 ? 1 'Varela, P.F.' 11 ? 1 'Sanz, L.' 12 ? 1 'Topfer-Petersen, E.' 13 ? 1 'Calvete, J.J.' 14 ? 2 'Calvete, J.J.' 15 ? 2 'Mann, K.' 16 ? 2 'Schafer, W.' 17 ? 2 'Raida, M.' 18 ? 2 'Sanz, L.' 19 ? 2 'Topfer-Petersen, E.' 20 ? 3 'Bork, P.' 21 ? 3 'Beckmann, G.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-I' 11997.683 1 ? ? ? ? 2 polymer nat 'MAJOR SEMINAL PLASMA GLYCOPROTEIN PSP-II' 12658.431 1 ? ? ? ? 3 water nat water 18.015 79 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;LDYHACGGRLTDDYGTIFTYKGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILNRG SSGMTVKYKRDSGHPASPYEIIFLRDSQG ; ;LDYHACGGRLTDDYGTIFTYKGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILNRG SSGMTVKYKRDSGHPASPYEIIFLRDSQG ; A ? 2 'polypeptide(L)' no no ;ARINGPDECGRVIKDTSGSISNTDRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEVFDGLLSGPSYGKLCAGAAIV FLSTANTMTIKYNRISGNSSSPFLIYFYGSSPGSEY ; ;ARINGPDECGRVIKDTSGSISNTDRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEVFDGLLSGPSYGKLCAGAAIV FLSTANTMTIKYNRISGNSSSPFLIYFYGSSPGSEY ; B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ASP n 1 3 TYR n 1 4 HIS n 1 5 ALA n 1 6 CYS n 1 7 GLY n 1 8 GLY n 1 9 ARG n 1 10 LEU n 1 11 THR n 1 12 ASP n 1 13 ASP n 1 14 TYR n 1 15 GLY n 1 16 THR n 1 17 ILE n 1 18 PHE n 1 19 THR n 1 20 TYR n 1 21 LYS n 1 22 GLY n 1 23 PRO n 1 24 LYS n 1 25 THR n 1 26 GLU n 1 27 CYS n 1 28 VAL n 1 29 TRP n 1 30 THR n 1 31 LEU n 1 32 GLN n 1 33 VAL n 1 34 ASP n 1 35 PRO n 1 36 LYS n 1 37 TYR n 1 38 LYS n 1 39 LEU n 1 40 LEU n 1 41 VAL n 1 42 SER n 1 43 ILE n 1 44 PRO n 1 45 THR n 1 46 LEU n 1 47 ASN n 1 48 LEU n 1 49 THR n 1 50 CYS n 1 51 GLY n 1 52 LYS n 1 53 GLU n 1 54 TYR n 1 55 VAL n 1 56 GLU n 1 57 VAL n 1 58 LEU n 1 59 GLU n 1 60 GLY n 1 61 ALA n 1 62 PRO n 1 63 GLY n 1 64 SER n 1 65 LYS n 1 66 SER n 1 67 LEU n 1 68 GLY n 1 69 LYS n 1 70 PHE n 1 71 CYS n 1 72 GLU n 1 73 GLY n 1 74 LEU n 1 75 SER n 1 76 ILE n 1 77 LEU n 1 78 ASN n 1 79 ARG n 1 80 GLY n 1 81 SER n 1 82 SER n 1 83 GLY n 1 84 MET n 1 85 THR n 1 86 VAL n 1 87 LYS n 1 88 TYR n 1 89 LYS n 1 90 ARG n 1 91 ASP n 1 92 SER n 1 93 GLY n 1 94 HIS n 1 95 PRO n 1 96 ALA n 1 97 SER n 1 98 PRO n 1 99 TYR n 1 100 GLU n 1 101 ILE n 1 102 ILE n 1 103 PHE n 1 104 LEU n 1 105 ARG n 1 106 ASP n 1 107 SER n 1 108 GLN n 1 109 GLY n 2 1 ALA n 2 2 ARG n 2 3 ILE n 2 4 ASN n 2 5 GLY n 2 6 PRO n 2 7 ASP n 2 8 GLU n 2 9 CYS n 2 10 GLY n 2 11 ARG n 2 12 VAL n 2 13 ILE n 2 14 LYS n 2 15 ASP n 2 16 THR n 2 17 SER n 2 18 GLY n 2 19 SER n 2 20 ILE n 2 21 SER n 2 22 ASN n 2 23 THR n 2 24 ASP n 2 25 ARG n 2 26 GLN n 2 27 LYS n 2 28 ASN n 2 29 LEU n 2 30 CYS n 2 31 THR n 2 32 TRP n 2 33 THR n 2 34 ILE n 2 35 LEU n 2 36 MET n 2 37 LYS n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 LYS n 2 42 VAL n 2 43 ARG n 2 44 MET n 2 45 ALA n 2 46 ILE n 2 47 PRO n 2 48 TYR n 2 49 LEU n 2 50 ASN n 2 51 LEU n 2 52 ALA n 2 53 CYS n 2 54 GLY n 2 55 LYS n 2 56 GLU n 2 57 TYR n 2 58 VAL n 2 59 GLU n 2 60 VAL n 2 61 PHE n 2 62 ASP n 2 63 GLY n 2 64 LEU n 2 65 LEU n 2 66 SER n 2 67 GLY n 2 68 PRO n 2 69 SER n 2 70 TYR n 2 71 GLY n 2 72 LYS n 2 73 LEU n 2 74 CYS n 2 75 ALA n 2 76 GLY n 2 77 ALA n 2 78 ALA n 2 79 ILE n 2 80 VAL n 2 81 PHE n 2 82 LEU n 2 83 SER n 2 84 THR n 2 85 ALA n 2 86 ASN n 2 87 THR n 2 88 MET n 2 89 THR n 2 90 ILE n 2 91 LYS n 2 92 TYR n 2 93 ASN n 2 94 ARG n 2 95 ILE n 2 96 SER n 2 97 GLY n 2 98 ASN n 2 99 SER n 2 100 SER n 2 101 SER n 2 102 PRO n 2 103 PHE n 2 104 LEU n 2 105 ILE n 2 106 TYR n 2 107 PHE n 2 108 TYR n 2 109 GLY n 2 110 SER n 2 111 SER n 2 112 PRO n 2 113 GLY n 2 114 SER n 2 115 GLU n 2 116 TYR n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? pig 'Sus scrofa' 9823 Sus ? ? SPERM ? ? ? ? ? ? ? PLASMA ? ? ? ? ? 2 1 sample ? ? pig 'Sus scrofa' 9823 Sus ? ? SPERM ? ? ? ? ? ? ? PLASMA ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 4 4 LEU LEU A . n A 1 2 ASP 2 5 5 ASP ASP A . n A 1 3 TYR 3 6 6 TYR TYR A . n A 1 4 HIS 4 7 7 HIS HIS A . n A 1 5 ALA 5 8 8 ALA ALA A . n A 1 6 CYS 6 9 9 CYS CYS A . n A 1 7 GLY 7 10 10 GLY GLY A . n A 1 8 GLY 8 11 11 GLY GLY A . n A 1 9 ARG 9 12 12 ARG ARG A . n A 1 10 LEU 10 13 13 LEU LEU A . n A 1 11 THR 11 14 14 THR THR A . n A 1 12 ASP 12 15 15 ASP ASP A . n A 1 13 ASP 13 16 16 ASP ASP A . n A 1 14 TYR 14 17 17 TYR TYR A . n A 1 15 GLY 15 18 18 GLY GLY A . n A 1 16 THR 16 19 19 THR THR A . n A 1 17 ILE 17 20 20 ILE ILE A . n A 1 18 PHE 18 21 21 PHE PHE A . n A 1 19 THR 19 22 22 THR THR A . n A 1 20 TYR 20 23 23 TYR TYR A . n A 1 21 LYS 21 24 24 LYS LYS A . n A 1 22 GLY 22 25 25 GLY GLY A . n A 1 23 PRO 23 26 26 PRO PRO A . n A 1 24 LYS 24 27 27 LYS LYS A . n A 1 25 THR 25 28 28 THR THR A . n A 1 26 GLU 26 29 29 GLU GLU A . n A 1 27 CYS 27 30 30 CYS CYS A . n A 1 28 VAL 28 31 31 VAL VAL A . n A 1 29 TRP 29 32 32 TRP TRP A . n A 1 30 THR 30 33 33 THR THR A . n A 1 31 LEU 31 34 34 LEU LEU A . n A 1 32 GLN 32 35 35 GLN GLN A . n A 1 33 VAL 33 36 36 VAL VAL A . n A 1 34 ASP 34 37 37 ASP ASP A . n A 1 35 PRO 35 38 38 PRO PRO A . n A 1 36 LYS 36 39 39 LYS LYS A . n A 1 37 TYR 37 40 40 TYR TYR A . n A 1 38 LYS 38 41 41 LYS LYS A . n A 1 39 LEU 39 42 42 LEU LEU A . n A 1 40 LEU 40 43 43 LEU LEU A . n A 1 41 VAL 41 44 44 VAL VAL A . n A 1 42 SER 42 45 45 SER SER A . n A 1 43 ILE 43 46 46 ILE ILE A . n A 1 44 PRO 44 47 47 PRO PRO A . n A 1 45 THR 45 48 48 THR THR A . n A 1 46 LEU 46 49 49 LEU LEU A . n A 1 47 ASN 47 50 50 ASN ASN A . n A 1 48 LEU 48 51 51 LEU LEU A . n A 1 49 THR 49 52 52 THR THR A . n A 1 50 CYS 50 53 53 CYS CYS A . n A 1 51 GLY 51 54 54 GLY GLY A . n A 1 52 LYS 52 55 55 LYS LYS A . n A 1 53 GLU 53 56 56 GLU GLU A . n A 1 54 TYR 54 57 57 TYR TYR A . n A 1 55 VAL 55 58 58 VAL VAL A . n A 1 56 GLU 56 59 59 GLU GLU A . n A 1 57 VAL 57 60 60 VAL VAL A . n A 1 58 LEU 58 61 61 LEU LEU A . n A 1 59 GLU 59 62 62 GLU GLU A . n A 1 60 GLY 60 63 63 GLY GLY A . n A 1 61 ALA 61 64 64 ALA ALA A . n A 1 62 PRO 62 65 65 PRO PRO A . n A 1 63 GLY 63 66 66 GLY GLY A . n A 1 64 SER 64 67 67 SER SER A . n A 1 65 LYS 65 68 68 LYS LYS A . n A 1 66 SER 66 69 69 SER SER A . n A 1 67 LEU 67 70 70 LEU LEU A . n A 1 68 GLY 68 71 71 GLY GLY A . n A 1 69 LYS 69 72 72 LYS LYS A . n A 1 70 PHE 70 73 73 PHE PHE A . n A 1 71 CYS 71 74 74 CYS CYS A . n A 1 72 GLU 72 75 75 GLU GLU A . n A 1 73 GLY 73 76 76 GLY GLY A . n A 1 74 LEU 74 77 77 LEU LEU A . n A 1 75 SER 75 78 78 SER SER A . n A 1 76 ILE 76 79 79 ILE ILE A . n A 1 77 LEU 77 80 80 LEU LEU A . n A 1 78 ASN 78 81 81 ASN ASN A . n A 1 79 ARG 79 82 82 ARG ARG A . n A 1 80 GLY 80 83 83 GLY GLY A . n A 1 81 SER 81 84 84 SER SER A . n A 1 82 SER 82 85 85 SER SER A . n A 1 83 GLY 83 87 87 GLY GLY A . n A 1 84 MET 84 88 88 MET MET A . n A 1 85 THR 85 89 89 THR THR A . n A 1 86 VAL 86 90 90 VAL VAL A . n A 1 87 LYS 87 91 91 LYS LYS A . n A 1 88 TYR 88 92 92 TYR TYR A . n A 1 89 LYS 89 93 93 LYS LYS A . n A 1 90 ARG 90 94 94 ARG ARG A . n A 1 91 ASP 91 95 95 ASP ASP A . n A 1 92 SER 92 96 96 SER SER A . n A 1 93 GLY 93 97 97 GLY GLY A . n A 1 94 HIS 94 98 98 HIS HIS A . n A 1 95 PRO 95 99 99 PRO PRO A . n A 1 96 ALA 96 100 100 ALA ALA A . n A 1 97 SER 97 101 101 SER SER A . n A 1 98 PRO 98 102 102 PRO PRO A . n A 1 99 TYR 99 103 103 TYR TYR A . n A 1 100 GLU 100 104 104 GLU GLU A . n A 1 101 ILE 101 105 105 ILE ILE A . n A 1 102 ILE 102 106 106 ILE ILE A . n A 1 103 PHE 103 107 107 PHE PHE A . n A 1 104 LEU 104 108 108 LEU LEU A . n A 1 105 ARG 105 109 109 ARG ARG A . n A 1 106 ASP 106 110 110 ASP ASP A . n A 1 107 SER 107 111 111 SER SER A . n A 1 108 GLN 108 112 112 GLN GLN A . n A 1 109 GLY 109 113 113 GLY GLY A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 ARG 2 2 2 ARG ARG B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 ASN 4 4 4 ASN ASN B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 PRO 6 6 6 PRO PRO B . n B 2 7 ASP 7 7 7 ASP ASP B . n B 2 8 GLU 8 8 8 GLU GLU B . n B 2 9 CYS 9 9 9 CYS CYS B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 ARG 11 11 11 ARG ARG B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 LYS 14 14 14 LYS LYS B . n B 2 15 ASP 15 15 15 ASP ASP B . n B 2 16 THR 16 16 16 THR THR B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 SER 19 19 19 SER SER B . n B 2 20 ILE 20 20 20 ILE ILE B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 ASN 22 22 22 ASN ASN B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 ASP 24 24 24 ASP ASP B . n B 2 25 ARG 25 25 25 ARG ARG B . n B 2 26 GLN 26 26 26 GLN GLN B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 ASN 28 28 28 ASN ASN B . n B 2 29 LEU 29 29 29 LEU LEU B . n B 2 30 CYS 30 30 30 CYS CYS B . n B 2 31 THR 31 31 31 THR THR B . n B 2 32 TRP 32 32 32 TRP TRP B . n B 2 33 THR 33 33 33 THR THR B . n B 2 34 ILE 34 34 34 ILE ILE B . n B 2 35 LEU 35 35 35 LEU LEU B . n B 2 36 MET 36 36 36 MET MET B . n B 2 37 LYS 37 37 37 LYS LYS B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 VAL 42 42 42 VAL VAL B . n B 2 43 ARG 43 43 43 ARG ARG B . n B 2 44 MET 44 44 44 MET MET B . n B 2 45 ALA 45 45 45 ALA ALA B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 TYR 48 48 48 TYR TYR B . n B 2 49 LEU 49 49 49 LEU LEU B . n B 2 50 ASN 50 50 50 ASN ASN B . n B 2 51 LEU 51 51 51 LEU LEU B . n B 2 52 ALA 52 52 52 ALA ALA B . n B 2 53 CYS 53 53 53 CYS CYS B . n B 2 54 GLY 54 54 54 GLY GLY B . n B 2 55 LYS 55 55 55 LYS LYS B . n B 2 56 GLU 56 56 56 GLU GLU B . n B 2 57 TYR 57 57 57 TYR TYR B . n B 2 58 VAL 58 58 58 VAL VAL B . n B 2 59 GLU 59 59 59 GLU GLU B . n B 2 60 VAL 60 60 60 VAL VAL B . n B 2 61 PHE 61 61 61 PHE PHE B . n B 2 62 ASP 62 62 62 ASP ASP B . n B 2 63 GLY 63 63 63 GLY GLY B . n B 2 64 LEU 64 64 64 LEU LEU B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 SER 66 66 66 SER SER B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 PRO 68 68 68 PRO PRO B . n B 2 69 SER 69 69 69 SER SER B . n B 2 70 TYR 70 70 70 TYR TYR B . n B 2 71 GLY 71 71 71 GLY GLY B . n B 2 72 LYS 72 72 72 LYS LYS B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 CYS 74 74 74 CYS CYS B . n B 2 75 ALA 75 75 75 ALA ALA B . n B 2 76 GLY 76 76 76 GLY GLY B . n B 2 77 ALA 77 77 77 ALA ALA B . n B 2 78 ALA 78 78 78 ALA ALA B . n B 2 79 ILE 79 79 79 ILE ILE B . n B 2 80 VAL 80 80 80 VAL VAL B . n B 2 81 PHE 81 81 81 PHE PHE B . n B 2 82 LEU 82 82 82 LEU LEU B . n B 2 83 SER 83 83 83 SER SER B . n B 2 84 THR 84 84 84 THR THR B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 ASN 86 86 86 ASN ASN B . n B 2 87 THR 87 87 87 THR THR B . n B 2 88 MET 88 88 88 MET MET B . n B 2 89 THR 89 89 89 THR THR B . n B 2 90 ILE 90 90 90 ILE ILE B . n B 2 91 LYS 91 91 91 LYS LYS B . n B 2 92 TYR 92 92 92 TYR TYR B . n B 2 93 ASN 93 93 93 ASN ASN B . n B 2 94 ARG 94 94 94 ARG ARG B . n B 2 95 ILE 95 95 95 ILE ILE B . n B 2 96 SER 96 96 96 SER SER B . n B 2 97 GLY 97 97 97 GLY GLY B . n B 2 98 ASN 98 98 98 ASN ASN B . n B 2 99 SER 99 99 99 SER SER B . n B 2 100 SER 100 100 100 SER SER B . n B 2 101 SER 101 101 101 SER SER B . n B 2 102 PRO 102 102 102 PRO PRO B . n B 2 103 PHE 103 103 103 PHE PHE B . n B 2 104 LEU 104 104 104 LEU LEU B . n B 2 105 ILE 105 105 105 ILE ILE B . n B 2 106 TYR 106 106 106 TYR TYR B . n B 2 107 PHE 107 107 107 PHE PHE B . n B 2 108 TYR 108 108 108 TYR TYR B . n B 2 109 GLY 109 109 109 GLY GLY B . n B 2 110 SER 110 110 110 SER SER B . n B 2 111 SER 111 111 111 SER SER B . n B 2 112 PRO 112 112 112 PRO PRO B . n B 2 113 GLY 113 113 ? ? ? B . n B 2 114 SER 114 114 ? ? ? B . n B 2 115 GLU 115 115 ? ? ? B . n B 2 116 TYR 116 116 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 300 300 HOH HOH A . C 3 HOH 2 301 301 HOH HOH A . C 3 HOH 3 302 302 HOH HOH A . C 3 HOH 4 304 304 HOH HOH A . C 3 HOH 5 305 305 HOH HOH A . C 3 HOH 6 306 306 HOH HOH A . C 3 HOH 7 307 307 HOH HOH A . C 3 HOH 8 310 310 HOH HOH A . C 3 HOH 9 311 311 HOH HOH A . C 3 HOH 10 313 313 HOH HOH A . C 3 HOH 11 315 315 HOH HOH A . C 3 HOH 12 316 316 HOH HOH A . C 3 HOH 13 320 320 HOH HOH A . C 3 HOH 14 321 321 HOH HOH A . C 3 HOH 15 322 322 HOH HOH A . C 3 HOH 16 323 323 HOH HOH A . C 3 HOH 17 324 324 HOH HOH A . C 3 HOH 18 325 325 HOH HOH A . C 3 HOH 19 326 326 HOH HOH A . C 3 HOH 20 327 327 HOH HOH A . C 3 HOH 21 328 328 HOH HOH A . C 3 HOH 22 329 329 HOH HOH A . C 3 HOH 23 330 330 HOH HOH A . C 3 HOH 24 331 331 HOH HOH A . C 3 HOH 25 332 332 HOH HOH A . C 3 HOH 26 333 333 HOH HOH A . C 3 HOH 27 342 342 HOH HOH A . C 3 HOH 28 343 343 HOH HOH A . C 3 HOH 29 344 344 HOH HOH A . C 3 HOH 30 345 345 HOH HOH A . C 3 HOH 31 346 346 HOH HOH A . C 3 HOH 32 347 347 HOH HOH A . C 3 HOH 33 348 348 HOH HOH A . C 3 HOH 34 353 353 HOH HOH A . C 3 HOH 35 354 354 HOH HOH A . C 3 HOH 36 355 355 HOH HOH A . C 3 HOH 37 356 356 HOH HOH A . C 3 HOH 38 357 357 HOH HOH A . C 3 HOH 39 358 358 HOH HOH A . C 3 HOH 40 359 359 HOH HOH A . C 3 HOH 41 360 360 HOH HOH A . C 3 HOH 42 362 362 HOH HOH A . C 3 HOH 43 363 363 HOH HOH A . C 3 HOH 44 364 364 HOH HOH A . C 3 HOH 45 365 365 HOH HOH A . C 3 HOH 46 366 366 HOH HOH A . C 3 HOH 47 367 367 HOH HOH A . C 3 HOH 48 368 368 HOH HOH A . D 3 HOH 1 303 303 HOH HOH B . D 3 HOH 2 308 308 HOH HOH B . D 3 HOH 3 309 309 HOH HOH B . D 3 HOH 4 312 312 HOH HOH B . D 3 HOH 5 314 314 HOH HOH B . D 3 HOH 6 317 317 HOH HOH B . D 3 HOH 7 318 318 HOH HOH B . D 3 HOH 8 319 319 HOH HOH B . D 3 HOH 9 334 334 HOH HOH B . D 3 HOH 10 335 335 HOH HOH B . D 3 HOH 11 336 336 HOH HOH B . D 3 HOH 12 337 337 HOH HOH B . D 3 HOH 13 338 338 HOH HOH B . D 3 HOH 14 339 339 HOH HOH B . D 3 HOH 15 340 340 HOH HOH B . D 3 HOH 16 341 341 HOH HOH B . D 3 HOH 17 349 349 HOH HOH B . D 3 HOH 18 350 350 HOH HOH B . D 3 HOH 19 351 351 HOH HOH B . D 3 HOH 20 352 352 HOH HOH B . D 3 HOH 21 361 361 HOH HOH B . D 3 HOH 22 369 369 HOH HOH B . D 3 HOH 23 370 370 HOH HOH B . D 3 HOH 24 371 371 HOH HOH B . D 3 HOH 25 372 372 HOH HOH B . D 3 HOH 26 373 373 HOH HOH B . D 3 HOH 27 374 374 HOH HOH B . D 3 HOH 28 375 375 HOH HOH B . D 3 HOH 29 376 376 HOH HOH B . D 3 HOH 30 377 377 HOH HOH B . D 3 HOH 31 378 378 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 55 ? CG ? B LYS 55 CG 2 1 Y 1 B LYS 55 ? CD ? B LYS 55 CD 3 1 Y 1 B LYS 55 ? CE ? B LYS 55 CE 4 1 Y 1 B LYS 55 ? NZ ? B LYS 55 NZ 5 1 Y 1 B ASN 98 ? CG ? B ASN 98 CG 6 1 Y 1 B ASN 98 ? OD1 ? B ASN 98 OD1 7 1 Y 1 B ASN 98 ? ND2 ? B ASN 98 ND2 8 1 Y 1 B SER 99 ? OG ? B SER 99 OG 9 1 Y 1 B SER 111 ? OG ? B SER 111 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 ROTAVATA 'data reduction' . ? 2 CCP4 'model building' . ? 3 PROTEIN 'model building' . ? 4 X-PLOR refinement 3.1 ? 5 CCP4 'data scaling' '(ROTAVATA)' ? 6 CCP4 phasing . ? 7 PROTEIN phasing . ? 8 # _cell.entry_id 1SPP _cell.length_a 96.370 _cell.length_b 96.370 _cell.length_c 71.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SPP _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.entry_id 1SPP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.21 _exptl_crystal.density_percent_sol 62. _exptl_crystal.description ;HEAVY-ATOM DERIVATIVES FOR MIR WERE PREPARED BY USING HEXAGONAL CRYSTALS OF THE PSP-I/PSP-II (CRYSTALS DIFFRACTED UP TO 3.0 A). MIR PHASES WERE CALCULATED USING MLPHARE AFTER SCALING BY SCALEIT. THE MODEL OBTAINED FOR THE HEXAGONAL CRYSTAL FORM WAS USED AS A SEARCH MODEL FOR REFINING THE STRUCTURE IN THE TRIGONAL CRYSTALS TO 2.4 A RESOLUTION BY MOLECULAR REPLACEMENT USING AMORE ; # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN WAS CRYSTALLIZED FROM 30% (W/V) PEG 2000, 100 MM AMMONIUM ACETATE, PH 6.5. THE INITIAL PROTEIN CONCENTRATION WAS 15 MG/ML' # _diffrn.id 1 _diffrn.ambient_temp 285 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1995-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SPP _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.94 _reflns.d_resolution_high 2.40 _reflns.number_obs 14809 _reflns.number_all ? _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value 0.08 _reflns.pdbx_netI_over_sigmaI 7.1 _reflns.B_iso_Wilson_estimate 45.20 _reflns.pdbx_redundancy 4.1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.5 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.265 _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SPP _refine.ls_number_reflns_obs 14291 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0. _refine.pdbx_data_cutoff_high_absF 735.54 _refine.pdbx_data_cutoff_low_absF 3.29 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.4 _refine.ls_percent_reflns_obs 97.0 _refine.ls_R_factor_obs 0.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.259 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 31.71 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1688 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1767 _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.657 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 28.39 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.195 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 2.0 2.0 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.5 2.5 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.5 2.5 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.0 3.0 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.51 _refine_ls_shell.number_reflns_R_work 1647 _refine_ls_shell.R_factor_R_work 0.331 _refine_ls_shell.percent_reflns_obs 98.0 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARAMCSDX.PRO TOPHCSD.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1SPP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SPP _struct.title 'THE CRYSTAL STRUCTURES OF TWO MEMBERS OF THE SPERMADHESIN FAMILY REVEAL THE FOLDING OF THE CUB DOMAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SPP _struct_keywords.pdbx_keywords 'COMPLEX (SEMINAL PLASMA PROTEIN/SPP)' _struct_keywords.text ;SEMINAL PLASMA PROTEINS, SPERMADHESINS, CUB DOMAIN ARCHITECTURE, COMPLEX (SEMINAL PLASMA PROTEIN-SPP), COMPLEX (SEMINAL PLASMA PROTEIN-SPP) complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PSP1_PIG 1 P35495 1 ;LDYHACGGRLTDDYGTIFTYKGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILNRG SSGMTVKYKRDSGHPASPYEIIFLRDSQG ; ? 2 UNP PSP2_PIG 2 P35496 1 ;MKLGTAIPWALLLSTATLVSTARINGPDECGRVIKDTSGSISNTDRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVE VFDGLLSGPSYGKLCAGAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYGSSPGSEY ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SPP A 1 ? 109 ? P35495 1 ? 109 ? 4 113 2 2 1SPP B 1 ? 116 ? P35496 22 ? 137 ? 1 116 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id B _struct_conf.beg_label_seq_id 5 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id B _struct_conf.end_label_seq_id 8 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id B _struct_conf.beg_auth_seq_id 5 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id B _struct_conf.end_auth_seq_id 8 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 27 SG ? ? A CYS 9 A CYS 30 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 71 SG ? ? A CYS 53 A CYS 74 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf3 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 9 B CYS 30 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf4 disulf ? ? B CYS 53 SG ? ? ? 1_555 B CYS 74 SG ? ? B CYS 53 B CYS 74 1_555 ? ? ? ? ? ? ? 2.029 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 6 ? CYS A 27 ? CYS A 9 ? 1_555 CYS A 30 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 50 ? CYS A 71 ? CYS A 53 ? 1_555 CYS A 74 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 9 ? CYS B 30 ? CYS B 9 ? 1_555 CYS B 30 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 53 ? CYS B 74 ? CYS B 53 ? 1_555 CYS B 74 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? D ? 5 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 8 ? THR A 11 ? GLY A 11 THR A 14 A 2 GLU A 26 ? GLN A 32 ? GLU A 29 GLN A 35 A 3 THR A 85 ? ARG A 90 ? THR A 89 ARG A 94 A 4 GLU A 53 ? LEU A 58 ? GLU A 56 LEU A 61 A 5 SER A 66 ? PHE A 70 ? SER A 69 PHE A 73 B 1 TYR A 14 ? PHE A 18 ? TYR A 17 PHE A 21 B 2 GLU A 100 ? ASP A 106 ? GLU A 104 ASP A 110 B 3 LYS A 38 ? PRO A 44 ? LYS A 41 PRO A 47 B 4 SER A 75 ? GLY A 80 ? SER A 78 GLY A 83 C 1 ARG B 2 ? ASN B 4 ? ARG B 2 ASN B 4 C 2 SER B 17 ? SER B 21 ? SER B 17 SER B 21 C 3 LEU B 104 ? SER B 110 ? LEU B 104 SER B 110 C 4 LYS B 41 ? ILE B 46 ? LYS B 41 ILE B 46 C 5 ILE B 79 ? LEU B 82 ? ILE B 79 LEU B 82 D 1 ARG B 11 ? ILE B 13 ? ARG B 11 ILE B 13 D 2 LEU B 29 ? LEU B 35 ? LEU B 29 LEU B 35 D 3 THR B 87 ? ARG B 94 ? THR B 87 ARG B 94 D 4 GLU B 56 ? ASP B 62 ? GLU B 56 ASP B 62 D 5 PRO B 68 ? LEU B 73 ? PRO B 68 LEU B 73 E 1 TYR B 48 ? ASN B 50 ? TYR B 48 ASN B 50 E 2 ALA B 75 ? ALA B 77 ? ALA B 75 ALA B 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 8 ? O GLY A 11 N THR A 30 ? N THR A 33 A 2 3 O CYS A 27 ? O CYS A 30 N TYR A 88 ? N TYR A 92 A 3 4 O THR A 85 ? O THR A 89 N LEU A 58 ? N LEU A 61 A 4 5 O VAL A 55 ? O VAL A 58 N PHE A 70 ? N PHE A 73 B 1 2 O GLY A 15 ? O GLY A 18 N PHE A 103 ? N PHE A 107 B 2 3 O ILE A 102 ? O ILE A 106 N SER A 42 ? N SER A 45 B 3 4 O LEU A 39 ? O LEU A 42 N GLY A 80 ? N GLY A 83 C 1 2 O ILE B 3 ? O ILE B 3 N SER B 19 ? N SER B 19 C 2 3 O GLY B 18 ? O GLY B 18 N PHE B 107 ? N PHE B 107 C 3 4 O TYR B 106 ? O TYR B 106 N ALA B 45 ? N ALA B 45 C 4 5 O MET B 44 ? O MET B 44 N PHE B 81 ? N PHE B 81 D 1 2 O ARG B 11 ? O ARG B 11 N THR B 33 ? N THR B 33 D 2 3 O CYS B 30 ? O CYS B 30 N TYR B 92 ? N TYR B 92 D 3 4 O THR B 89 ? O THR B 89 N PHE B 61 ? N PHE B 61 D 4 5 O VAL B 58 ? O VAL B 58 N LEU B 73 ? N LEU B 73 E 1 2 O LEU B 49 ? O LEU B 49 N GLY B 76 ? N GLY B 76 # _pdbx_entry_details.entry_id 1SPP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;ANALYSIS OF CDNAS CODING FOR BOAR SEMINAL PLASMA PSP-I AND PSP-II INDICATED THAT THE FULL-LENGTH AMINO ACIDS SEQUENCES OF THE PROTEINS CONTAIN 112 AND 116 RESIDUES, RESPECTIVELY. HOWEVER, THE MATURE PSP-I/PSP-II HETERODIMER FORM ISOLATED FROM ITS NATURAL SOURCE, THE BOAR SEMINAL PLASMA, LACKS THE FIRST THREE N-TERMINAL RESIDUES OF THE PSP-I SUBUNIT. THIS WAS CONFIRMED BY N-TERMINAL AMINO ACID SEQUENCES ANALYSIS OF HEXAGONAL AND TRIGONAL CRYSTALLINE PSP-I/PSP-II COMPLEX. THUS THE CRYSTAL STRUCTURE OS PSP-I/PSP-II REPORTED HERE CORRESPONDS TO RESIDUES LEU 4 - GLN 112 AND ALA 1 - TYR 116 OF PSP-I AND PSP-II, RESPECTIVELY. ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 38 ? ? -48.05 -13.31 2 1 THR A 48 ? ? 32.55 67.89 3 1 THR B 23 ? ? 77.50 161.90 4 1 ALA B 85 ? ? -128.27 -164.45 5 1 SER B 96 ? ? 60.62 141.91 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 113 ? B GLY 113 2 1 Y 1 B SER 114 ? B SER 114 3 1 Y 1 B GLU 115 ? B GLU 115 4 1 Y 1 B TYR 116 ? B TYR 116 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 1SPP _atom_sites.fract_transf_matrix[1][1] 0.010377 _atom_sites.fract_transf_matrix[1][2] 0.005991 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011982 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014021 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_