HEADER ISOMERASE 17-MAR-04 1SPQ TITLE UNDERSTANDING PROTEIN LIDS: STRUCTURAL ANALYSIS OF ACTIVE HINGE TITLE 2 MUTANTS IN TRIOSEPHOSPHATE ISOMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TIM; COMPND 5 EC: 5.3.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: TPI1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DF502; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBSX1C KEYWDS ARCHAE, EVOLUTION, FLEXIBLE LOOP-6, TIM, N-HINGE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.KURSULA,M.SALIN,J.SUN,B.V.NORLEDGE,A.M.HAAPALAINEN,N.S.SAMPSON, AUTHOR 2 R.K.WIERENGA REVDAT 6 25-OCT-23 1SPQ 1 REMARK REVDAT 5 10-NOV-21 1SPQ 1 REMARK SEQADV REVDAT 4 11-OCT-17 1SPQ 1 REMARK REVDAT 3 13-JUL-11 1SPQ 1 VERSN REVDAT 2 24-FEB-09 1SPQ 1 VERSN REVDAT 1 24-AUG-04 1SPQ 0 JRNL AUTH I.KURSULA,M.SALIN,J.SUN,B.V.NORLEDGE,A.M.HAAPALAINEN, JRNL AUTH 2 N.S.SAMPSON,R.K.WIERENGA JRNL TITL UNDERSTANDING PROTEIN LIDS: STRUCTURAL ANALYSIS OF ACTIVE JRNL TITL 2 HINGE MUTANTS IN TRIOSEPHOSPHATE ISOMERASE JRNL REF PROTEIN ENG.DES.SEL. V. 17 375 2004 JRNL REFN ISSN 1741-0126 JRNL PMID 15166315 JRNL DOI 10.1093/PROTEIN/GZH048 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 23998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1270 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.27 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2619 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1700 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3664 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 352 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.19000 REMARK 3 B22 (A**2) : -1.29000 REMARK 3 B33 (A**2) : 2.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.92000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.256 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3753 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3433 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5055 ; 1.225 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8020 ; 0.858 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 478 ; 5.931 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 561 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4169 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 715 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 586 ; 0.181 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3350 ; 0.221 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1877 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.120 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.175 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.276 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.220 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2368 ; 0.983 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3774 ; 1.588 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1385 ; 0.962 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1281 ; 1.507 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 14 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 9 A 18 3 REMARK 3 1 B 9 B 18 3 REMARK 3 2 A 27 A 31 3 REMARK 3 2 B 27 B 31 3 REMARK 3 3 A 33 A 57 3 REMARK 3 3 B 33 B 57 3 REMARK 3 4 A 59 A 70 3 REMARK 3 4 B 59 B 70 3 REMARK 3 5 A 72 A 83 3 REMARK 3 5 B 72 B 83 3 REMARK 3 6 A 85 A 99 3 REMARK 3 6 B 85 B 99 3 REMARK 3 7 A 101 A 110 3 REMARK 3 7 B 101 B 110 3 REMARK 3 8 A 116 A 133 3 REMARK 3 8 B 116 B 133 3 REMARK 3 9 A 136 A 140 3 REMARK 3 9 B 136 B 140 3 REMARK 3 10 A 149 A 154 3 REMARK 3 10 B 149 B 154 3 REMARK 3 11 A 180 A 186 3 REMARK 3 11 B 180 B 186 3 REMARK 3 12 A 188 A 192 3 REMARK 3 12 B 188 B 192 3 REMARK 3 13 A 203 A 217 3 REMARK 3 13 B 203 B 217 3 REMARK 3 14 A 219 A 246 3 REMARK 3 14 B 219 B 246 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1010 ; 0.04 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 1425 ; 0.14 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 1010 ; 0.09 ; 0.50 REMARK 3 LOOSE THERMAL 1 A (A**2): 1425 ; 0.81 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 248 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5730 -12.1440 39.3860 REMARK 3 T TENSOR REMARK 3 T11: 0.2316 T22: 0.2855 REMARK 3 T33: 0.0064 T12: -0.0003 REMARK 3 T13: -0.0372 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.0511 L22: 0.8920 REMARK 3 L33: 0.8016 L12: 0.2856 REMARK 3 L13: -0.0565 L23: -0.2825 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: -0.2206 S13: -0.0280 REMARK 3 S21: 0.0799 S22: 0.0002 S23: 0.0771 REMARK 3 S31: -0.0315 S32: -0.1137 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 248 REMARK 3 ORIGIN FOR THE GROUP (A): 23.2820 12.2950 14.9610 REMARK 3 T TENSOR REMARK 3 T11: 0.2866 T22: 0.2286 REMARK 3 T33: 0.0221 T12: 0.0100 REMARK 3 T13: -0.0671 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.0126 L22: 0.8172 REMARK 3 L33: 0.7077 L12: -0.0808 REMARK 3 L13: -0.1083 L23: -0.1122 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: 0.1023 S13: 0.1159 REMARK 3 S21: -0.0860 S22: -0.0252 S23: 0.1204 REMARK 3 S31: -0.0975 S32: -0.0629 S33: 0.0119 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1SPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : TRIANGULAR REMARK 200 OPTICS : BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25268 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.480 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14500 REMARK 200 R SYM FOR SHELL (I) : 0.14400 REMARK 200 FOR SHELL : 7.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 8TIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, TRIS, 2-PHOSPHOGLYCOLATE, PH REMARK 280 9.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.35300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.66700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.35300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.66700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ASYMMETRIC UNIT CONTAINS ONE BIOLOGICAL UNIT, DIMER (CHAINS REMARK 300 A AND B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 GLY A 171 REMARK 465 THR A 172 REMARK 465 ALA B 169 REMARK 465 ILE B 170 REMARK 465 GLY B 171 REMARK 465 THR B 172 REMARK 465 GLY B 173 REMARK 465 LYS B 174 REMARK 465 THR B 175 REMARK 465 LYS B 176 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 13 -148.01 54.62 REMARK 500 VAL A 196 -82.12 -122.04 REMARK 500 ASN A 245 30.68 -96.01 REMARK 500 LYS B 13 -150.55 56.13 REMARK 500 VAL B 196 -89.58 -123.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SQ7 RELATED DB: PDB REMARK 900 K174L, T175W MUTANTS REMARK 900 RELATED ID: 1SSD RELATED DB: PDB REMARK 900 K174Y, T175S, A176L MUTANTS REMARK 900 RELATED ID: 1SSG RELATED DB: PDB REMARK 900 K174Y, T175S, A176L MUTANTS WITH PGA REMARK 900 RELATED ID: 1SU5 RELATED DB: PDB REMARK 900 K174N, T175P, A176N MUTANTS REMARK 900 RELATED ID: 1SW0 RELATED DB: PDB REMARK 900 K174L, T175W MUTANTS WITH PGA REMARK 900 RELATED ID: 1SW3 RELATED DB: PDB REMARK 900 T175V MUTANT REMARK 900 RELATED ID: 1SW7 RELATED DB: PDB REMARK 900 K174N, T175S, A176S MUTANTS DBREF 1SPQ A 2 248 UNP P00940 TPIS_CHICK 1 247 DBREF 1SPQ B 2 248 UNP P00940 TPIS_CHICK 1 247 SEQADV 1SPQ LYS A 176 UNP P00940 ALA 175 ENGINEERED MUTATION SEQADV 1SPQ LYS B 176 UNP P00940 ALA 175 ENGINEERED MUTATION SEQRES 1 A 247 ALA PRO ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS MET SEQRES 2 A 247 ASN GLY ASP LYS LYS SER LEU GLY GLU LEU ILE HIS THR SEQRES 3 A 247 LEU ASN GLY ALA LYS LEU SER ALA ASP THR GLU VAL VAL SEQRES 4 A 247 CYS GLY ALA PRO SER ILE TYR LEU ASP PHE ALA ARG GLN SEQRES 5 A 247 LYS LEU ASP ALA LYS ILE GLY VAL ALA ALA GLN ASN CYS SEQRES 6 A 247 TYR LYS VAL PRO LYS GLY ALA PHE THR GLY GLU ILE SER SEQRES 7 A 247 PRO ALA MET ILE LYS ASP ILE GLY ALA ALA TRP VAL ILE SEQRES 8 A 247 LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SER SEQRES 9 A 247 ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU ALA SEQRES 10 A 247 GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS LEU SEQRES 11 A 247 ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL PHE SEQRES 12 A 247 GLU GLN THR LYS ALA ILE ALA ASP ASN VAL LYS ASP TRP SEQRES 13 A 247 SER LYS VAL VAL LEU ALA TYR GLU PRO VAL TRP ALA ILE SEQRES 14 A 247 GLY THR GLY LYS THR LYS THR PRO GLN GLN ALA GLN GLU SEQRES 15 A 247 VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER HIS VAL SEQRES 16 A 247 SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR GLY SEQRES 17 A 247 GLY SER VAL THR GLY GLY ASN CYS LYS GLU LEU ALA SER SEQRES 18 A 247 GLN HIS ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SER SEQRES 19 A 247 LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS HIS SEQRES 1 B 247 ALA PRO ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS MET SEQRES 2 B 247 ASN GLY ASP LYS LYS SER LEU GLY GLU LEU ILE HIS THR SEQRES 3 B 247 LEU ASN GLY ALA LYS LEU SER ALA ASP THR GLU VAL VAL SEQRES 4 B 247 CYS GLY ALA PRO SER ILE TYR LEU ASP PHE ALA ARG GLN SEQRES 5 B 247 LYS LEU ASP ALA LYS ILE GLY VAL ALA ALA GLN ASN CYS SEQRES 6 B 247 TYR LYS VAL PRO LYS GLY ALA PHE THR GLY GLU ILE SER SEQRES 7 B 247 PRO ALA MET ILE LYS ASP ILE GLY ALA ALA TRP VAL ILE SEQRES 8 B 247 LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SER SEQRES 9 B 247 ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU ALA SEQRES 10 B 247 GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS LEU SEQRES 11 B 247 ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL PHE SEQRES 12 B 247 GLU GLN THR LYS ALA ILE ALA ASP ASN VAL LYS ASP TRP SEQRES 13 B 247 SER LYS VAL VAL LEU ALA TYR GLU PRO VAL TRP ALA ILE SEQRES 14 B 247 GLY THR GLY LYS THR LYS THR PRO GLN GLN ALA GLN GLU SEQRES 15 B 247 VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER HIS VAL SEQRES 16 B 247 SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR GLY SEQRES 17 B 247 GLY SER VAL THR GLY GLY ASN CYS LYS GLU LEU ALA SER SEQRES 18 B 247 GLN HIS ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SER SEQRES 19 B 247 LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS HIS HET PEG A1003 7 HET PEG B1001 7 HET PEG B1002 7 HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 PEG 3(C4 H10 O3) FORMUL 6 HOH *352(H2 O) HELIX 1 1 ASP A 17 ALA A 31 1 15 HELIX 2 2 PRO A 44 ILE A 46 5 3 HELIX 3 3 TYR A 47 LEU A 55 1 9 HELIX 4 4 SER A 79 ILE A 86 1 8 HELIX 5 5 HIS A 95 VAL A 101 1 7 HELIX 6 6 SER A 105 GLU A 119 1 15 HELIX 7 7 LYS A 130 ALA A 136 1 7 HELIX 8 8 ILE A 138 ASP A 152 1 15 HELIX 9 9 ASP A 156 SER A 158 5 3 HELIX 10 10 THR A 177 VAL A 196 1 20 HELIX 11 11 SER A 197 THR A 204 1 8 HELIX 12 12 ASN A 216 SER A 222 1 7 HELIX 13 13 GLY A 232 PRO A 238 5 7 HELIX 14 14 GLU A 239 ASN A 245 1 7 HELIX 15 15 ASP B 17 ALA B 31 1 15 HELIX 16 16 PRO B 44 ILE B 46 5 3 HELIX 17 17 TYR B 47 LEU B 55 1 9 HELIX 18 18 SER B 79 ILE B 86 1 8 HELIX 19 19 HIS B 95 VAL B 101 1 7 HELIX 20 20 SER B 105 GLU B 119 1 15 HELIX 21 21 LYS B 130 ALA B 136 1 7 HELIX 22 22 ILE B 138 ASP B 152 1 15 HELIX 23 23 ASP B 156 SER B 158 5 3 HELIX 24 24 THR B 177 VAL B 196 1 20 HELIX 25 25 SER B 197 THR B 204 1 8 HELIX 26 26 ASN B 216 SER B 222 1 7 HELIX 27 27 GLY B 232 PRO B 238 5 7 HELIX 28 28 GLU B 239 ASN B 245 1 7 SHEET 1 A 9 PHE A 6 ASN A 11 0 SHEET 2 A 9 THR A 37 GLY A 42 1 O GLY A 42 N GLY A 10 SHEET 3 A 9 GLY A 60 ALA A 63 1 O GLY A 60 N VAL A 39 SHEET 4 A 9 TRP A 90 LEU A 93 1 O ILE A 92 N ALA A 63 SHEET 5 A 9 GLY A 122 ILE A 127 1 O CYS A 126 N LEU A 93 SHEET 6 A 9 VAL A 160 TYR A 164 1 O ALA A 163 N ALA A 125 SHEET 7 A 9 ILE A 206 TYR A 208 1 O ILE A 207 N LEU A 162 SHEET 8 A 9 GLY A 228 VAL A 231 1 O GLY A 228 N TYR A 208 SHEET 9 A 9 PHE A 6 ASN A 11 1 N ASN A 11 O VAL A 231 SHEET 1 B 9 PHE B 6 ASN B 11 0 SHEET 2 B 9 THR B 37 GLY B 42 1 O GLY B 42 N GLY B 10 SHEET 3 B 9 GLY B 60 ALA B 63 1 O GLY B 60 N CYS B 41 SHEET 4 B 9 TRP B 90 LEU B 93 1 O ILE B 92 N ALA B 63 SHEET 5 B 9 GLY B 122 ILE B 127 1 O CYS B 126 N LEU B 93 SHEET 6 B 9 VAL B 160 TYR B 164 1 O ALA B 163 N ALA B 125 SHEET 7 B 9 ILE B 206 TYR B 208 1 O ILE B 207 N LEU B 162 SHEET 8 B 9 GLY B 228 VAL B 231 1 O GLY B 228 N TYR B 208 SHEET 9 B 9 PHE B 6 ASN B 11 1 N ASN B 11 O VAL B 231 SITE 1 AC1 5 ASN A 15 SER A 222 LYS B 71 HOH B1159 SITE 2 AC1 5 HOH B1162 SITE 1 AC2 7 ASP A 49 GLN A 53 LYS B 18 ASP B 49 SITE 2 AC2 7 GLN B 53 HOH B1146 HOH B1156 SITE 1 AC3 3 PHE A 102 VAL B 101 PHE B 102 CRYST1 80.706 57.334 106.154 90.00 92.89 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012391 0.000000 0.000626 0.00000 SCALE2 0.000000 0.017442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009432 0.00000