data_1STB # _entry.id 1STB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1STB pdb_00001stb 10.2210/pdb1stb/pdb WWPDB D_1000176502 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-07-31 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2019-07-17 6 'Structure model' 1 5 2019-08-14 7 'Structure model' 1 6 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Refinement description' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' 11 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type 4 5 'Structure model' software 5 6 'Structure model' software 6 7 'Structure model' chem_comp_atom 7 7 'Structure model' chem_comp_bond 8 7 'Structure model' database_2 9 7 'Structure model' pdbx_struct_conn_angle 10 7 'Structure model' struct_conn 11 7 'Structure model' struct_ref_seq_dif 12 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_software.classification' 3 6 'Structure model' '_software.classification' 4 7 'Structure model' '_database_2.pdbx_DOI' 5 7 'Structure model' '_database_2.pdbx_database_accession' 6 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 7 'Structure model' '_pdbx_struct_conn_angle.value' 19 7 'Structure model' '_struct_conn.pdbx_dist_value' 20 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 7 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 7 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 7 'Structure model' '_struct_ref_seq_dif.details' 33 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1STB _pdbx_database_status.recvd_initial_deposition_date 1994-01-17 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Quirk, S.' 1 'Gittis, A.' 2 'Keefe, L.J.' 3 'Lattman, E.E.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Accommodation of insertion mutations on the surface and in the interior of staphylococcal nuclease.' 'Protein Sci.' 3 391 401 1994 PRCIEI US 0961-8368 0795 ? 8019410 ? 1 'The Alpha Aneurism: A Structural Motif Revealed in an Insertion Mutant of Staphylococcal Nuclease' Proc.Natl.Acad.Sci.USA 90 3275 ? 1993 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Keefe, L.J.' 1 ? primary 'Quirk, S.' 2 ? primary 'Gittis, A.' 3 ? primary 'Sondek, J.' 4 ? primary 'Lattman, E.E.' 5 ? 1 'Keefe, L.J.' 6 ? 1 'Sondek, J.' 7 ? 1 'Shortle, D.' 8 ? 1 'Lattman, E.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'STAPHYLOCOCCAL NUCLEASE' 16956.486 1 3.1.31.1 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn "THYMIDINE-3',5'-DIPHOSPHATE" 402.188 1 ? ? ? ? 4 water nat water 18.015 39 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKG QRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKG QRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 "THYMIDINE-3',5'-DIPHOSPHATE" THP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 SER n 1 4 THR n 1 5 LYS n 1 6 LYS n 1 7 LEU n 1 8 HIS n 1 9 LYS n 1 10 GLU n 1 11 PRO n 1 12 ALA n 1 13 THR n 1 14 LEU n 1 15 ILE n 1 16 LYS n 1 17 ALA n 1 18 ILE n 1 19 ASP n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 VAL n 1 24 LYS n 1 25 LEU n 1 26 MET n 1 27 TYR n 1 28 LYS n 1 29 GLY n 1 30 GLN n 1 31 PRO n 1 32 MET n 1 33 THR n 1 34 PHE n 1 35 ARG n 1 36 LEU n 1 37 LEU n 1 38 LEU n 1 39 LEU n 1 40 VAL n 1 41 ASP n 1 42 THR n 1 43 PRO n 1 44 GLU n 1 45 THR n 1 46 LYS n 1 47 HIS n 1 48 PRO n 1 49 LYS n 1 50 LYS n 1 51 GLY n 1 52 VAL n 1 53 GLU n 1 54 LYS n 1 55 TYR n 1 56 GLY n 1 57 PRO n 1 58 GLU n 1 59 ALA n 1 60 SER n 1 61 ALA n 1 62 PHE n 1 63 THR n 1 64 LYS n 1 65 LYS n 1 66 MET n 1 67 VAL n 1 68 GLU n 1 69 ASN n 1 70 ALA n 1 71 LYS n 1 72 LYS n 1 73 ILE n 1 74 GLU n 1 75 VAL n 1 76 GLU n 1 77 PHE n 1 78 ASP n 1 79 LYS n 1 80 GLY n 1 81 GLN n 1 82 ARG n 1 83 THR n 1 84 ASP n 1 85 LYS n 1 86 TYR n 1 87 GLY n 1 88 ARG n 1 89 GLY n 1 90 LEU n 1 91 ALA n 1 92 TYR n 1 93 ILE n 1 94 TYR n 1 95 ALA n 1 96 ASP n 1 97 GLY n 1 98 LYS n 1 99 MET n 1 100 VAL n 1 101 ASN n 1 102 GLU n 1 103 ALA n 1 104 LEU n 1 105 VAL n 1 106 ARG n 1 107 GLN n 1 108 GLY n 1 109 LEU n 1 110 ALA n 1 111 LYS n 1 112 VAL n 1 113 ALA n 1 114 TYR n 1 115 VAL n 1 116 TYR n 1 117 LYS n 1 118 PRO n 1 119 ASN n 1 120 ASN n 1 121 THR n 1 122 HIS n 1 123 GLU n 1 124 GLN n 1 125 HIS n 1 126 LEU n 1 127 ARG n 1 128 LYS n 1 129 SER n 1 130 GLU n 1 131 ALA n 1 132 GLN n 1 133 ALA n 1 134 LYS n 1 135 LYS n 1 136 GLU n 1 137 LYS n 1 138 LEU n 1 139 ASN n 1 140 ILE n 1 141 TRP n 1 142 SER n 1 143 GLU n 1 144 ASP n 1 145 ASN n 1 146 ALA n 1 147 ASP n 1 148 SER n 1 149 GLY n 1 150 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THP 'DNA linking' . "THYMIDINE-3',5'-DIPHOSPHATE" ? 'C10 H16 N2 O11 P2' 402.188 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LEU 37 36 36 LEU LEU A A n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 ASP 41 40 40 ASP ASP A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 HIS 47 46 46 HIS HIS A . n A 1 48 PRO 48 47 47 PRO PRO A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 LYS 50 49 49 LYS LYS A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 GLU 53 52 52 GLU GLU A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 SER 60 59 59 SER SER A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 LYS 65 64 64 LYS LYS A . n A 1 66 MET 66 65 65 MET MET A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 GLU 68 67 67 GLU GLU A . n A 1 69 ASN 69 68 68 ASN ASN A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 LYS 72 71 71 LYS LYS A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 PHE 77 76 76 PHE PHE A . n A 1 78 ASP 78 77 77 ASP ASP A . n A 1 79 LYS 79 78 78 LYS LYS A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 THR 83 82 82 THR THR A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 LYS 85 84 84 LYS LYS A . n A 1 86 TYR 86 85 85 TYR TYR A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 TYR 92 91 91 TYR TYR A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 TYR 94 93 93 TYR TYR A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 ASP 96 95 95 ASP ASP A . n A 1 97 GLY 97 96 96 GLY GLY A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 MET 99 98 98 MET MET A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 ASN 101 100 100 ASN ASN A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 ARG 106 105 105 ARG ARG A . n A 1 107 GLN 107 106 106 GLN GLN A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 LYS 111 110 110 LYS LYS A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 TYR 116 115 115 TYR TYR A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 ASN 119 118 118 ASN ASN A . n A 1 120 ASN 120 119 119 ASN ASN A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 HIS 122 121 121 HIS HIS A . n A 1 123 GLU 123 122 122 GLU GLU A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 HIS 125 124 124 HIS HIS A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 ARG 127 126 126 ARG ARG A . n A 1 128 LYS 128 127 127 LYS LYS A . n A 1 129 SER 129 128 128 SER SER A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 LYS 134 133 133 LYS LYS A . n A 1 135 LYS 135 134 134 LYS LYS A . n A 1 136 GLU 136 135 135 GLU GLU A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 ASN 139 138 138 ASN ASN A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 TRP 141 140 140 TRP TRP A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 GLU 143 142 ? ? ? A . n A 1 144 ASP 144 143 ? ? ? A . n A 1 145 ASN 145 144 ? ? ? A . n A 1 146 ALA 146 145 ? ? ? A . n A 1 147 ASP 147 146 ? ? ? A . n A 1 148 SER 148 147 ? ? ? A . n A 1 149 GLY 149 148 ? ? ? A . n A 1 150 GLN 150 149 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 150 144 CA CA A . C 3 THP 1 151 143 THP PTP A . D 4 HOH 1 152 145 HOH HOH A . D 4 HOH 2 153 146 HOH HOH A . D 4 HOH 3 154 147 HOH HOH A . D 4 HOH 4 155 149 HOH HOH A . D 4 HOH 5 156 150 HOH HOH A . D 4 HOH 6 157 151 HOH HOH A . D 4 HOH 7 158 152 HOH HOH A . D 4 HOH 8 159 153 HOH HOH A . D 4 HOH 9 160 154 HOH HOH A . D 4 HOH 10 161 155 HOH HOH A . D 4 HOH 11 162 156 HOH HOH A . D 4 HOH 12 163 157 HOH HOH A . D 4 HOH 13 164 158 HOH HOH A . D 4 HOH 14 165 159 HOH HOH A . D 4 HOH 15 166 160 HOH HOH A . D 4 HOH 16 167 161 HOH HOH A . D 4 HOH 17 168 162 HOH HOH A . D 4 HOH 18 169 163 HOH HOH A . D 4 HOH 19 170 164 HOH HOH A . D 4 HOH 20 171 165 HOH HOH A . D 4 HOH 21 172 166 HOH HOH A . D 4 HOH 22 173 167 HOH HOH A . D 4 HOH 23 174 168 HOH HOH A . D 4 HOH 24 175 169 HOH HOH A . D 4 HOH 25 176 170 HOH HOH A . D 4 HOH 26 177 171 HOH HOH A . D 4 HOH 27 178 172 HOH HOH A . D 4 HOH 28 179 173 HOH HOH A . D 4 HOH 29 180 174 HOH HOH A . D 4 HOH 30 181 175 HOH HOH A . D 4 HOH 31 182 176 HOH HOH A . D 4 HOH 32 183 177 HOH HOH A . D 4 HOH 33 184 178 HOH HOH A . D 4 HOH 34 185 179 HOH HOH A . D 4 HOH 35 186 180 HOH HOH A . D 4 HOH 36 187 181 HOH HOH A . D 4 HOH 37 188 182 HOH HOH A . D 4 HOH 38 189 183 HOH HOH A . D 4 HOH 39 190 184 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 PROLSQ refinement . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1STB _cell.length_a 47.160 _cell.length_b 47.160 _cell.length_c 63.150 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1STB _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 # _exptl.entry_id 1STB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 40.58 _exptl_crystal.description ? # _refine.entry_id 1STB _refine.ls_number_reflns_obs 6906 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1960000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1960000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1100 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1165 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 6.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.70 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 21.3 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 3.60 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1STB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1STB _struct.title 'ACCOMMODATION OF INSERTION MUTATIONS ON THE SURFACE AND IN THE INTERIOR OF STAPHYLOCOCCAL NUCLEASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1STB _struct_keywords.pdbx_keywords 'HYDROLASE(PHOSPHORIC DIESTER)' _struct_keywords.text 'HYDROLASE(PHOSPHORIC DIESTER)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NUC_STAAU _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00644 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MLVMTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTV YSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDK GQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1STB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 149 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00644 _struct_ref_seq.db_align_beg 83 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 148 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1STB _struct_ref_seq_dif.mon_id LEU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 36 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00644 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details insertion _struct_ref_seq_dif.pdbx_auth_seq_num 36 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 TYR A 55 ? ASN A 69 ? TYR A 54 ASN A 68 1 ? 15 HELX_P HELX_P2 H2 MET A 99 ? GLN A 107 ? MET A 98 GLN A 106 1 ? 9 HELX_P HELX_P3 H3 HIS A 122 ? GLU A 136 ? HIS A 121 GLU A 135 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 19 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 19 A CA 150 1_555 ? ? ? ? ? ? ? 3.116 ? ? metalc2 metalc ? ? A ASP 19 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 19 A CA 150 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc3 metalc ? ? A ASP 21 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 21 A CA 150 1_555 ? ? ? ? ? ? ? 3.283 ? ? metalc4 metalc ? ? A ASP 21 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 21 A CA 150 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc5 metalc ? ? A ASP 41 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 40 A CA 150 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 150 A HOH 162 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 150 A HOH 163 1_555 ? ? ? ? ? ? ? 2.088 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 43.3 ? 2 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 101.7 ? 3 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 135.3 ? 4 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 66.6 ? 5 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 108.9 ? 6 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 40.3 ? 7 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 101.0 ? 8 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 95.0 ? 9 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 60.0 ? 10 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 86.6 ? 11 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 162 ? 1_555 147.9 ? 12 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 162 ? 1_555 168.8 ? 13 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 162 ? 1_555 52.2 ? 14 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 162 ? 1_555 81.9 ? 15 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 162 ? 1_555 82.5 ? 16 OD1 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 77.2 ? 17 OD2 ? A ASP 19 ? A ASP 19 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 93.7 ? 18 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 105.4 ? 19 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 78.9 ? 20 OD1 ? A ASP 41 ? A ASP 40 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 164.9 ? 21 O ? D HOH . ? A HOH 162 ? 1_555 CA ? B CA . ? A CA 150 ? 1_555 O ? D HOH . ? A HOH 163 ? 1_555 91.2 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 117 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 116 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 118 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 117 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details S1 ? 3 ? S2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense S1 1 2 ? anti-parallel S1 2 3 ? anti-parallel S2 1 2 ? anti-parallel S2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 LEU A 7 ? GLU A 10 ? LEU A 7 GLU A 10 S1 2 LYS A 72 ? GLU A 76 ? LYS A 71 GLU A 75 S1 3 TYR A 92 ? ASP A 96 ? TYR A 91 ASP A 95 S2 1 THR A 13 ? ASP A 19 ? THR A 13 ASP A 19 S2 2 ASP A 21 ? TYR A 27 ? ASP A 21 TYR A 27 S2 3 GLY A 29 ? ARG A 35 ? GLY A 29 ARG A 35 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id S1 1 2 N GLU A 10 ? N GLU A 10 O VAL A 75 ? O VAL A 74 S1 2 3 N GLU A 74 ? N GLU A 73 O TYR A 94 ? O TYR A 93 S2 1 2 N ILE A 18 ? N ILE A 18 O THR A 22 ? O THR A 22 S2 2 3 N VAL A 23 ? N VAL A 23 O PHE A 34 ? O PHE A 34 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CA Author ? ? ? ? 3 'BINDING SITE FOR THE CALCIUM ION' ACT Author ? ? ? ? 3 'ACTIVE SITE OF THE MOLECULE' AC1 Software A CA 150 ? 6 'BINDING SITE FOR RESIDUE CA A 150' AC2 Software A THP 151 ? 16 'BINDING SITE FOR RESIDUE THP A 151' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CA 3 ASP A 19 ? ASP A 19 . ? 1_555 ? 2 CA 3 ASP A 21 ? ASP A 21 . ? 1_555 ? 3 CA 3 ASP A 41 ? ASP A 40 . ? 1_555 ? 4 ACT 3 ARG A 35 ? ARG A 35 . ? 1_555 ? 5 ACT 3 GLU A 44 ? GLU A 43 . ? 1_555 ? 6 ACT 3 ARG A 88 ? ARG A 87 . ? 1_555 ? 7 AC1 6 ASP A 19 ? ASP A 19 . ? 1_555 ? 8 AC1 6 ASP A 21 ? ASP A 21 . ? 1_555 ? 9 AC1 6 ASP A 41 ? ASP A 40 . ? 1_555 ? 10 AC1 6 PRO A 43 ? PRO A 42 . ? 1_555 ? 11 AC1 6 HOH D . ? HOH A 162 . ? 1_555 ? 12 AC1 6 HOH D . ? HOH A 163 . ? 1_555 ? 13 AC2 16 ARG A 35 ? ARG A 35 . ? 1_555 ? 14 AC2 16 HIS A 47 ? HIS A 46 . ? 1_555 ? 15 AC2 16 LYS A 72 ? LYS A 71 . ? 3_655 ? 16 AC2 16 LYS A 85 ? LYS A 84 . ? 1_555 ? 17 AC2 16 TYR A 86 ? TYR A 85 . ? 1_555 ? 18 AC2 16 ARG A 88 ? ARG A 87 . ? 1_555 ? 19 AC2 16 LEU A 90 ? LEU A 89 . ? 1_555 ? 20 AC2 16 TYR A 114 ? TYR A 113 . ? 1_555 ? 21 AC2 16 TYR A 116 ? TYR A 115 . ? 1_555 ? 22 AC2 16 HOH D . ? HOH A 162 . ? 1_555 ? 23 AC2 16 HOH D . ? HOH A 163 . ? 1_555 ? 24 AC2 16 HOH D . ? HOH A 164 . ? 1_555 ? 25 AC2 16 HOH D . ? HOH A 165 . ? 1_555 ? 26 AC2 16 HOH D . ? HOH A 166 . ? 1_555 ? 27 AC2 16 HOH D . ? HOH A 168 . ? 1_555 ? 28 AC2 16 HOH D . ? HOH A 180 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE2 A HIS 8 ? ? CD2 A HIS 8 ? ? 1.302 1.373 -0.071 0.011 N 2 1 NE2 A HIS 46 ? ? CD2 A HIS 46 ? ? 1.301 1.373 -0.072 0.011 N 3 1 NE2 A HIS 121 ? ? CD2 A HIS 121 ? ? 1.287 1.373 -0.086 0.011 N 4 1 NE2 A HIS 124 ? ? CD2 A HIS 124 ? ? 1.301 1.373 -0.072 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 27 ? ? CG A TYR 27 ? ? CD2 A TYR 27 ? ? 116.55 121.00 -4.45 0.60 N 2 1 CB A ASP 40 ? ? CG A ASP 40 ? ? OD1 A ASP 40 ? ? 124.37 118.30 6.07 0.90 N 3 1 N A THR 41 ? ? CA A THR 41 ? ? CB A THR 41 ? ? 98.56 110.30 -11.74 1.90 N 4 1 CA A THR 41 ? ? C A THR 41 ? ? N A PRO 42 ? ? 135.96 117.10 18.86 2.80 Y 5 1 N A PRO 42 ? ? CA A PRO 42 ? ? C A PRO 42 ? ? 133.67 112.10 21.57 2.60 N 6 1 CA A GLU 43 ? ? CB A GLU 43 ? ? CG A GLU 43 ? ? 94.92 113.40 -18.48 2.20 N 7 1 CB A HIS 46 ? ? CG A HIS 46 ? ? CD2 A HIS 46 ? ? 118.01 129.70 -11.69 1.60 N 8 1 NE A ARG 81 ? ? CZ A ARG 81 ? ? NH2 A ARG 81 ? ? 115.38 120.30 -4.92 0.50 N 9 1 CD1 A TRP 140 ? ? CG A TRP 140 ? ? CD2 A TRP 140 ? ? 113.49 106.30 7.19 0.80 N 10 1 CE2 A TRP 140 ? ? CD2 A TRP 140 ? ? CG A TRP 140 ? ? 100.82 107.30 -6.48 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 28 ? ? 31.45 46.94 2 1 LYS A 45 ? ? -68.98 -178.20 3 1 LYS A 49 ? ? 65.21 -16.97 4 1 TYR A 54 ? ? 69.90 -11.85 5 1 ASN A 119 ? ? -150.29 38.66 6 1 ASN A 138 ? ? 51.75 -100.85 # _pdbx_entry_details.entry_id 1STB _pdbx_entry_details.compound_details ;THE INSERTED LEUCINE RESIDUE IS ACCOMMODATED IN A REGISTER SHIFT THAT CHANGES THE CONFORMATION OF THE FLEXIBLE LOOP PORTION OF THE MOLECULE, RELAXING AND WIDENING THE OMEGA TURN. THIS STRUCTURAL ALTERATION RESULTS IN CHANGES IN POSITION AND COORDINATION OF A BOUND CALCIUM ION IMPORTANT FOR CATALYSIS. AS A RESULT, THE ENZYME IS 500 TIMES LESS ACTIVE THAN THE WILD TYPE ENZYME. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A GLU 142 ? A GLU 143 7 1 Y 1 A ASP 143 ? A ASP 144 8 1 Y 1 A ASN 144 ? A ASN 145 9 1 Y 1 A ALA 145 ? A ALA 146 10 1 Y 1 A ASP 146 ? A ASP 147 11 1 Y 1 A SER 147 ? A SER 148 12 1 Y 1 A GLY 148 ? A GLY 149 13 1 Y 1 A GLN 149 ? A GLN 150 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THP P2 P N N 291 THP O4P O N N 292 THP O5P O N N 293 THP O6P O N N 294 THP P1 P N N 295 THP O1P O N N 296 THP O2P O N N 297 THP O3P O N N 298 THP "O5'" O N N 299 THP "C5'" C N N 300 THP "C4'" C N R 301 THP "O4'" O N N 302 THP "C3'" C N S 303 THP "O3'" O N N 304 THP "C2'" C N N 305 THP "C1'" C N R 306 THP N1 N N N 307 THP C2 C N N 308 THP O2 O N N 309 THP N3 N N N 310 THP C4 C N N 311 THP O4 O N N 312 THP C5 C N N 313 THP C5M C N N 314 THP C6 C N N 315 THP HOP5 H N N 316 THP HOP6 H N N 317 THP HOP2 H N N 318 THP HOP3 H N N 319 THP "H5'1" H N N 320 THP "H5'2" H N N 321 THP "H4'" H N N 322 THP "H3'" H N N 323 THP "H2'1" H N N 324 THP "H2'2" H N N 325 THP "H1'" H N N 326 THP H3 H N N 327 THP H51 H N N 328 THP H52 H N N 329 THP H53 H N N 330 THP H6 H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THP P2 O4P doub N N 277 THP P2 O5P sing N N 278 THP P2 O6P sing N N 279 THP P2 "O5'" sing N N 280 THP O5P HOP5 sing N N 281 THP O6P HOP6 sing N N 282 THP P1 O1P doub N N 283 THP P1 O2P sing N N 284 THP P1 O3P sing N N 285 THP P1 "O3'" sing N N 286 THP O2P HOP2 sing N N 287 THP O3P HOP3 sing N N 288 THP "O5'" "C5'" sing N N 289 THP "C5'" "C4'" sing N N 290 THP "C5'" "H5'1" sing N N 291 THP "C5'" "H5'2" sing N N 292 THP "C4'" "O4'" sing N N 293 THP "C4'" "C3'" sing N N 294 THP "C4'" "H4'" sing N N 295 THP "O4'" "C1'" sing N N 296 THP "C3'" "O3'" sing N N 297 THP "C3'" "C2'" sing N N 298 THP "C3'" "H3'" sing N N 299 THP "C2'" "C1'" sing N N 300 THP "C2'" "H2'1" sing N N 301 THP "C2'" "H2'2" sing N N 302 THP "C1'" N1 sing N N 303 THP "C1'" "H1'" sing N N 304 THP N1 C2 sing N N 305 THP N1 C6 sing N N 306 THP C2 O2 doub N N 307 THP C2 N3 sing N N 308 THP N3 C4 sing N N 309 THP N3 H3 sing N N 310 THP C4 O4 doub N N 311 THP C4 C5 sing N N 312 THP C5 C5M sing N N 313 THP C5 C6 doub N N 314 THP C5M H51 sing N N 315 THP C5M H52 sing N N 316 THP C5M H53 sing N N 317 THP C6 H6 sing N N 318 THR N CA sing N N 319 THR N H sing N N 320 THR N H2 sing N N 321 THR CA C sing N N 322 THR CA CB sing N N 323 THR CA HA sing N N 324 THR C O doub N N 325 THR C OXT sing N N 326 THR CB OG1 sing N N 327 THR CB CG2 sing N N 328 THR CB HB sing N N 329 THR OG1 HG1 sing N N 330 THR CG2 HG21 sing N N 331 THR CG2 HG22 sing N N 332 THR CG2 HG23 sing N N 333 THR OXT HXT sing N N 334 TRP N CA sing N N 335 TRP N H sing N N 336 TRP N H2 sing N N 337 TRP CA C sing N N 338 TRP CA CB sing N N 339 TRP CA HA sing N N 340 TRP C O doub N N 341 TRP C OXT sing N N 342 TRP CB CG sing N N 343 TRP CB HB2 sing N N 344 TRP CB HB3 sing N N 345 TRP CG CD1 doub Y N 346 TRP CG CD2 sing Y N 347 TRP CD1 NE1 sing Y N 348 TRP CD1 HD1 sing N N 349 TRP CD2 CE2 doub Y N 350 TRP CD2 CE3 sing Y N 351 TRP NE1 CE2 sing Y N 352 TRP NE1 HE1 sing N N 353 TRP CE2 CZ2 sing Y N 354 TRP CE3 CZ3 doub Y N 355 TRP CE3 HE3 sing N N 356 TRP CZ2 CH2 doub Y N 357 TRP CZ2 HZ2 sing N N 358 TRP CZ3 CH2 sing Y N 359 TRP CZ3 HZ3 sing N N 360 TRP CH2 HH2 sing N N 361 TRP OXT HXT sing N N 362 TYR N CA sing N N 363 TYR N H sing N N 364 TYR N H2 sing N N 365 TYR CA C sing N N 366 TYR CA CB sing N N 367 TYR CA HA sing N N 368 TYR C O doub N N 369 TYR C OXT sing N N 370 TYR CB CG sing N N 371 TYR CB HB2 sing N N 372 TYR CB HB3 sing N N 373 TYR CG CD1 doub Y N 374 TYR CG CD2 sing Y N 375 TYR CD1 CE1 sing Y N 376 TYR CD1 HD1 sing N N 377 TYR CD2 CE2 doub Y N 378 TYR CD2 HD2 sing N N 379 TYR CE1 CZ doub Y N 380 TYR CE1 HE1 sing N N 381 TYR CE2 CZ sing Y N 382 TYR CE2 HE2 sing N N 383 TYR CZ OH sing N N 384 TYR OH HH sing N N 385 TYR OXT HXT sing N N 386 VAL N CA sing N N 387 VAL N H sing N N 388 VAL N H2 sing N N 389 VAL CA C sing N N 390 VAL CA CB sing N N 391 VAL CA HA sing N N 392 VAL C O doub N N 393 VAL C OXT sing N N 394 VAL CB CG1 sing N N 395 VAL CB CG2 sing N N 396 VAL CB HB sing N N 397 VAL CG1 HG11 sing N N 398 VAL CG1 HG12 sing N N 399 VAL CG1 HG13 sing N N 400 VAL CG2 HG21 sing N N 401 VAL CG2 HG22 sing N N 402 VAL CG2 HG23 sing N N 403 VAL OXT HXT sing N N 404 # _atom_sites.entry_id 1STB _atom_sites.fract_transf_matrix[1][1] 0.021204 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021204 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015835 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'CIS PROLINE - PRO 117' # loop_ _atom_type.symbol C CA N O P S # loop_