HEADER RNA BINDING PROTEIN 01-JUL-94 1SXL TITLE RESONANCE ASSIGNMENTS AND SOLUTION STRUCTURE OF THE SECOND RNA-BINDING TITLE 2 DOMAIN OF SEX-LETHAL DETERMINED BY MULTIDIMENSIONAL HETERONUCLEAR TITLE 3 MAGNETIC RESONANCE SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEX-LETHAL PROTEIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: SEX-LETHAL KEYWDS RNA-BINDING PROTEIN, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 17 AUTHOR A.L.LEE,R.KANAAR,D.C.RIO,D.E.WEMMER REVDAT 3 02-MAR-22 1SXL 1 KEYWDS REMARK REVDAT 2 24-FEB-09 1SXL 1 VERSN REVDAT 1 30-SEP-94 1SXL 0 JRNL AUTH A.L.LEE,R.KANAAR,D.C.RIO,D.E.WEMMER JRNL TITL RESONANCE ASSIGNMENTS AND SOLUTION STRUCTURE OF THE SECOND JRNL TITL 2 RNA-BINDING DOMAIN OF SEX-LETHAL DETERMINED BY JRNL TITL 3 MULTIDIMENSIONAL HETERONUCLEAR MAGNETIC RESONANCE. JRNL REF BIOCHEMISTRY V. 33 13775 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 7524663 JRNL DOI 10.1021/BI00250A031 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.S.GARRETT,P.J.LODI,Y.SHAMOO,K.R.WILLIAMS,G.M.CLORE, REMARK 1 AUTH 2 A.M.GRONENBORN REMARK 1 TITL DETERMINATION OF THE SECONDARY STRUCTURE AND FOLDING REMARK 1 TITL 2 TOPOLOGY OF AN RNA BINDING DOMAIN OF MAMMALIAN HNRNP A1 REMARK 1 TITL 3 PROTEIN USING THREE-DIMENSIONAL HETERONUCLEAR MAGNETIC REMARK 1 TITL 4 RESONANCE SPECTROSCOPY REMARK 1 REF BIOCHEMISTRY V. 33 2852 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.WITTEKIND,M.GOERLACH,M.FRIEDRICHS,G.DREYFUSS,L.MUELLER REMARK 1 TITL 1H,13C, AND 15N NMR ASSIGNMENTS AND GLOBAL FOLDING PATTERN REMARK 1 TITL 2 OF THE RNA-BINDING DOMAIN OF THE HUMAN HNRNP C PROTEINS REMARK 1 REF BIOCHEMISTRY V. 31 6254 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.NAGAI,C.OUBRIDGE,T.H.JESSEN,J.LI,P.R.EVANS REMARK 1 TITL CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF THE U1 SMALL REMARK 1 TITL 2 NUCLEAR RIBONUCLEOPROTEIN A REMARK 1 REF NATURE V. 348 515 1990 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SXL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176559. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 17 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 PRO A 86 C - N - CD ANGL. DEV. = -14.4 DEGREES REMARK 500 7 PRO A 86 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 8 PRO A 6 C - N - CD ANGL. DEV. = -13.5 DEGREES REMARK 500 12 PRO A 86 C - N - CD ANGL. DEV. = -15.9 DEGREES REMARK 500 13 PRO A 6 C - N - CD ANGL. DEV. = -13.6 DEGREES REMARK 500 17 PRO A 54 C - N - CD ANGL. DEV. = -12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 4 162.72 63.40 REMARK 500 1 ARG A 5 -88.36 -117.58 REMARK 500 1 PRO A 6 154.36 -43.63 REMARK 500 1 GLU A 9 140.69 166.47 REMARK 500 1 SER A 10 161.26 -38.63 REMARK 500 1 ILE A 11 103.93 -41.45 REMARK 500 1 LYS A 12 -87.28 -125.84 REMARK 500 1 ASP A 13 96.31 -161.93 REMARK 500 1 THR A 14 54.87 -148.23 REMARK 500 1 ASN A 20 89.74 52.69 REMARK 500 1 ARG A 23 42.63 -87.87 REMARK 500 1 PHE A 34 -83.01 -80.28 REMARK 500 1 LYS A 36 -39.99 -172.88 REMARK 500 1 TYR A 37 -77.52 -94.38 REMARK 500 1 ILE A 40 101.68 26.62 REMARK 500 1 GLN A 42 -164.65 -168.04 REMARK 500 1 LYS A 43 106.23 159.02 REMARK 500 1 LEU A 50 15.90 -147.84 REMARK 500 1 THR A 51 -39.48 -142.14 REMARK 500 1 TYR A 62 68.99 -161.39 REMARK 500 1 ASN A 63 -86.60 -46.86 REMARK 500 1 LYS A 64 118.37 -37.01 REMARK 500 1 ASN A 77 78.60 60.81 REMARK 500 1 VAL A 78 45.39 -85.23 REMARK 500 1 GLU A 81 107.35 -40.33 REMARK 500 1 SER A 84 -4.82 78.77 REMARK 500 1 GLN A 85 117.22 57.97 REMARK 500 1 ARG A 90 132.58 171.92 REMARK 500 1 GLU A 94 -38.13 -150.31 REMARK 500 1 HIS A 95 105.67 62.41 REMARK 500 2 TYR A 3 20.72 -152.32 REMARK 500 2 GLU A 9 114.62 65.07 REMARK 500 2 SER A 10 -162.25 -171.95 REMARK 500 2 ILE A 11 81.72 -68.11 REMARK 500 2 LYS A 12 19.99 42.81 REMARK 500 2 ASP A 13 -105.69 -157.97 REMARK 500 2 ASN A 20 91.27 57.17 REMARK 500 2 ARG A 23 -97.77 163.40 REMARK 500 2 THR A 24 -44.46 -162.36 REMARK 500 2 ILE A 25 -174.64 47.99 REMARK 500 2 LYS A 36 50.12 169.30 REMARK 500 2 TYR A 37 -86.51 -93.76 REMARK 500 2 ILE A 40 115.83 -34.83 REMARK 500 2 VAL A 41 38.54 -81.53 REMARK 500 2 GLN A 42 104.81 91.65 REMARK 500 2 ARG A 47 -35.52 -142.88 REMARK 500 2 LYS A 49 -43.56 -160.56 REMARK 500 2 LEU A 50 -40.50 -152.08 REMARK 500 2 ARG A 55 -89.62 -133.74 REMARK 500 2 ASN A 63 -91.95 -103.45 REMARK 500 REMARK 500 THIS ENTRY HAS 492 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 5 0.24 SIDE CHAIN REMARK 500 1 ARG A 23 0.17 SIDE CHAIN REMARK 500 1 ARG A 47 0.32 SIDE CHAIN REMARK 500 1 ARG A 53 0.25 SIDE CHAIN REMARK 500 1 ARG A 55 0.14 SIDE CHAIN REMARK 500 1 ARG A 61 0.10 SIDE CHAIN REMARK 500 1 ARG A 65 0.31 SIDE CHAIN REMARK 500 1 ARG A 90 0.09 SIDE CHAIN REMARK 500 2 ARG A 5 0.26 SIDE CHAIN REMARK 500 2 ARG A 23 0.10 SIDE CHAIN REMARK 500 2 ARG A 47 0.31 SIDE CHAIN REMARK 500 2 ARG A 53 0.17 SIDE CHAIN REMARK 500 2 ARG A 55 0.23 SIDE CHAIN REMARK 500 2 ARG A 61 0.28 SIDE CHAIN REMARK 500 2 ARG A 65 0.31 SIDE CHAIN REMARK 500 2 ARG A 90 0.23 SIDE CHAIN REMARK 500 3 ARG A 5 0.22 SIDE CHAIN REMARK 500 3 ARG A 23 0.21 SIDE CHAIN REMARK 500 3 ARG A 47 0.29 SIDE CHAIN REMARK 500 3 ARG A 55 0.32 SIDE CHAIN REMARK 500 3 ARG A 61 0.09 SIDE CHAIN REMARK 500 3 ARG A 65 0.21 SIDE CHAIN REMARK 500 4 ARG A 5 0.20 SIDE CHAIN REMARK 500 4 ARG A 23 0.29 SIDE CHAIN REMARK 500 4 ARG A 47 0.24 SIDE CHAIN REMARK 500 4 ARG A 53 0.28 SIDE CHAIN REMARK 500 4 ARG A 55 0.13 SIDE CHAIN REMARK 500 4 ARG A 61 0.19 SIDE CHAIN REMARK 500 4 ARG A 65 0.31 SIDE CHAIN REMARK 500 4 ARG A 90 0.20 SIDE CHAIN REMARK 500 5 ARG A 5 0.30 SIDE CHAIN REMARK 500 5 ARG A 23 0.19 SIDE CHAIN REMARK 500 5 ARG A 47 0.30 SIDE CHAIN REMARK 500 5 ARG A 53 0.21 SIDE CHAIN REMARK 500 5 ARG A 55 0.31 SIDE CHAIN REMARK 500 5 ARG A 61 0.26 SIDE CHAIN REMARK 500 5 ARG A 65 0.31 SIDE CHAIN REMARK 500 6 ARG A 5 0.26 SIDE CHAIN REMARK 500 6 ARG A 23 0.10 SIDE CHAIN REMARK 500 6 ARG A 53 0.20 SIDE CHAIN REMARK 500 6 ARG A 55 0.31 SIDE CHAIN REMARK 500 6 ARG A 61 0.27 SIDE CHAIN REMARK 500 6 ARG A 65 0.23 SIDE CHAIN REMARK 500 6 ARG A 90 0.28 SIDE CHAIN REMARK 500 7 ARG A 5 0.23 SIDE CHAIN REMARK 500 7 ARG A 23 0.10 SIDE CHAIN REMARK 500 7 ARG A 47 0.27 SIDE CHAIN REMARK 500 7 ARG A 53 0.11 SIDE CHAIN REMARK 500 7 ARG A 55 0.28 SIDE CHAIN REMARK 500 7 ARG A 61 0.18 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 128 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1SXL A 2 97 UNP P19339 SXL_DROME 199 294 SEQRES 1 A 97 MET SER TYR ALA ARG PRO GLY GLY GLU SER ILE LYS ASP SEQRES 2 A 97 THR ASN LEU TYR VAL THR ASN LEU PRO ARG THR ILE THR SEQRES 3 A 97 ASP ASP GLN LEU ASP THR ILE PHE GLY LYS TYR GLY SER SEQRES 4 A 97 ILE VAL GLN LYS ASN ILE LEU ARG ASP LYS LEU THR GLY SEQRES 5 A 97 ARG PRO ARG GLY VAL ALA PHE VAL ARG TYR ASN LYS ARG SEQRES 6 A 97 GLU GLU ALA GLN GLU ALA ILE SER ALA LEU ASN ASN VAL SEQRES 7 A 97 ILE PRO GLU GLY GLY SER GLN PRO LEU SER VAL ARG LEU SEQRES 8 A 97 ALA GLU GLU HIS GLY LYS HELIX 1 H1 THR A 26 GLY A 35 1 10 HELIX 2 H2 ARG A 65 ASN A 76 1 12 SHEET 1 B 4 ILE A 40 LEU A 46 0 SHEET 2 B 4 VAL A 57 TYR A 62 -1 O PHE A 59 N ASN A 44 SHEET 3 B 4 ASN A 15 THR A 19 -1 N LEU A 16 O VAL A 60 SHEET 4 B 4 SER A 88 LEU A 91 -1 N SER A 88 O THR A 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1