HEADER RNA 06-APR-04 1SZY
TITLE SOLUTION STRUCTURE OF ITALY1 ("INITIATOR TRNA ANTICODON LOOP FROM
TITLE 2 YEAST"), AN UNMODIFIED 21-NT RNA WITH THE SEQUENCE OF THE ANTICODON
TITLE 3 STEM-LOOP OF YEAST INITIATOR TRNA
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 5'-R(P*GP*GP*CP*AP*GP*GP*GP*CP*UP*CP*AP*UP*AP*AP*CP*CP*CP*U
COMPND 3 P*GP*CP*C)-3';
COMPND 4 CHAIN: A;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS INITIATOR TRNA ANTICODON LOOP, RNA
EXPDTA SOLUTION NMR
AUTHOR D.C.SCHWEISGUTH,P.B.MOORE
REVDAT 4 29-MAY-24 1SZY 1 REMARK
REVDAT 3 02-MAR-22 1SZY 1 REMARK
REVDAT 2 24-FEB-09 1SZY 1 VERSN
REVDAT 1 20-APR-04 1SZY 0
JRNL AUTH D.C.SCHWEISGUTH,P.B.MOORE
JRNL TITL ON THE CONFORMATION OF THE ANTICODON LOOPS OF INITIATOR AND
JRNL TITL 2 ELONGATOR METHIONINE TRNAS.
JRNL REF J.MOL.BIOL. V. 267 505 1997
JRNL REFN ISSN 0022-2836
JRNL PMID 9126834
JRNL DOI 10.1006/JMBI.1996.0903
REMARK 2
REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : FELIX UNKNOWN, X-PLOR 3.1
REMARK 3 AUTHORS : BRUNGER (X-PLOR)
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: RNA TOPOLOGY AND PARAMETERS FROM RIFE
REMARK 3 AND MOORE, NAR, 1996. CONSTRAINTS IN LOOP INCLUDED 128 NOES, 7
REMARK 3 CHI DIHEDRALS INFERRED FROM NOES, 20 V0-V4 RIBOSE DIHEDRALS, 8 A
REMARK 3 AND Z P DIHEDRALS, 12 B AND G P DIHEDRALS AND 7 E P DIHEDRALS.
REMARK 3 STEM WAS CONSTRAINED TO A-FORM BASED ON QUALITATIVE SPECTRAL
REMARK 3 ANALYSIS.
REMARK 4
REMARK 4 1SZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-APR-04.
REMARK 100 THE DEPOSITION ID IS D_1000022139.
REMARK 210
REMARK 210 EXPERIMENTAL DETAILS
REMARK 210 EXPERIMENT TYPE : NMR
REMARK 210 TEMPERATURE (KELVIN) : 303
REMARK 210 PH : 6.5
REMARK 210 IONIC STRENGTH : NULL
REMARK 210 PRESSURE : AMBIENT
REMARK 210 SAMPLE CONTENTS : S1 NMR BUFFER; 100MM KCL, 50MM
REMARK 210 NACL, 4MM NA CACODYLATE, 0.2MM
REMARK 210 EDTA
REMARK 210
REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; DQF-COSY; 13C-1H HSQC;
REMARK 210 TOCSY; GE JRSE NOESY; 31P-1H
REMARK 210 COSY; 31P-1H HETEROTOCSY; 31P-1H
REMARK 210 HETEROTOCSY-NOESY
REMARK 210 SPECTROMETER FIELD STRENGTH : 490 MHZ; 500 MHZ; 600 MHZ
REMARK 210 SPECTROMETER MODEL : HOMEBUILT; AM; OMEGA; UNITY;
REMARK 210 UNITYPLUS
REMARK 210 SPECTROMETER MANUFACTURER : YALE; BRUKER; GE; VARIAN
REMARK 210
REMARK 210 STRUCTURE DETERMINATION.
REMARK 210 SOFTWARE USED : X-PLOR 3.1
REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED
REMARK 210 ANNEALING
REMARK 210
REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL
REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1
REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL
REMARK 210
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL
REMARK 210
REMARK 210 REMARK: SEE DCS DISSERTATION P. 61.
REMARK 215
REMARK 215 NMR STUDY
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION
REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON
REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
DBREF 1SZY A 1 21 PDB 1SZY 1SZY 1 21
SEQRES 1 A 21 G G C A G G G C U C A U A
SEQRES 2 A 21 A C C C U G C C
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000