HEADER CHAPERONE 14-APR-04 1T11 TITLE TRIGGER FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIGGER FACTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TF TRUNCATION (RESIDUES 1-389); COMPND 5 SYNONYM: TF; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: TIG, VC1923; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSJ4 (MODIFIED PET21A) KEYWDS HELIX-TURN-HELIX, FOUR-HELIX-BUNDLE, PPIASE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR A.V.LUDLAM,B.A.MOORE,Z.XU REVDAT 5 03-APR-24 1T11 1 REMARK REVDAT 4 14-FEB-24 1T11 1 SEQADV REVDAT 3 11-OCT-17 1T11 1 REMARK REVDAT 2 24-FEB-09 1T11 1 VERSN REVDAT 1 21-SEP-04 1T11 0 JRNL AUTH A.V.LUDLAM,B.A.MOORE,Z.XU JRNL TITL THE CRYSTAL STRUCTURE OF RIBOSOMAL CHAPERONE TRIGGER FACTOR JRNL TITL 2 FROM VIBRIO CHOLERAE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 13436 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 15353602 JRNL DOI 10.1073/PNAS.0405868101 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 195581.620 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 69335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 6760 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9397 REMARK 3 BIN R VALUE (WORKING SET) : 0.3670 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 952 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5790 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 108 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.18000 REMARK 3 B22 (A**2) : 4.18000 REMARK 3 B33 (A**2) : -8.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.56 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.48 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.61 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.790 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.450 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.530 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.980 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.170 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 40.83 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FRIEDEL'S PAIRS WERE USED REMARK 4 REMARK 4 1T11 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000022178. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-03; 19-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 93; 93 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 5ID-B; 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94980; 0.9796, 0.9797, 1.0034 REMARK 200 MONOCHROMATOR : APS MIRRORS; APS MIRRORS REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78740 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 44.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 3.470 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.16 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36400 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: MALONATE CRYSTAL FORM SOLVED WITH MAD REMARK 200 (UNPUBLISHED). INCOMPLETE MODEL FROM MALONATE FORM USED FOR REMARK 200 MOLECULAR REPLACEMENT OF AMMONIUM SULFATE DATA. REMARK 200 REMARK 200 REMARK: STRUCTURE FACTOR FILE CONTAINS FRIEDEL'S PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRIS, PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K. MALONATE, GLYCINE, PH REMARK 280 9.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 94.93000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 94.93000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.03000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 94.93000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.51500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 94.93000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.54500 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 94.93000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 94.93000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.03000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 94.93000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 46.54500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 94.93000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 15.51500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER REMARK 300 AS REPRESENTED IN THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 73690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 189.86000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -189.86000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 GLU A 131 REMARK 465 VAL A 132 REMARK 465 THR A 133 REMARK 465 GLU A 379 REMARK 465 ASP A 380 REMARK 465 PRO A 381 REMARK 465 SER A 382 REMARK 465 GLU A 383 REMARK 465 VAL A 384 REMARK 465 VAL A 385 REMARK 465 SER A 386 REMARK 465 TYR A 387 REMARK 465 TYR A 388 REMARK 465 GLU A 389 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 ALA B 130 REMARK 465 GLU B 131 REMARK 465 VAL B 132 REMARK 465 THR B 133 REMARK 465 TYR B 378 REMARK 465 GLU B 379 REMARK 465 ASP B 380 REMARK 465 PRO B 381 REMARK 465 SER B 382 REMARK 465 GLU B 383 REMARK 465 VAL B 384 REMARK 465 VAL B 385 REMARK 465 SER B 386 REMARK 465 TYR B 387 REMARK 465 TYR B 388 REMARK 465 GLU B 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 40 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 42 CG OD1 OD2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 ASP A 220 CG OD1 OD2 REMARK 470 ARG B 40 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 42 CG OD1 OD2 REMARK 470 ARG B 45 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 134 CG OD1 OD2 REMARK 470 ASP B 220 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 136 N ALA B 138 1.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 -150.20 -102.08 REMARK 500 ASN A 38 -31.85 -156.62 REMARK 500 ASP A 42 93.54 -66.36 REMARK 500 LYS A 46 10.61 -61.69 REMARK 500 MET A 53 -70.18 -62.90 REMARK 500 PHE A 109 -179.10 -171.24 REMARK 500 LYS A 127 107.39 -37.52 REMARK 500 PRO A 128 94.70 -3.63 REMARK 500 ALA A 129 -146.30 -113.22 REMARK 500 ALA A 135 131.35 -12.21 REMARK 500 PRO A 186 97.52 -69.02 REMARK 500 ASP A 200 -10.43 -46.84 REMARK 500 LYS A 207 157.27 -46.08 REMARK 500 MET A 209 120.78 -27.31 REMARK 500 VAL A 215 157.64 173.51 REMARK 500 GLU A 219 -17.69 -49.33 REMARK 500 GLU A 224 -9.39 -53.09 REMARK 500 LYS A 227 -31.36 -22.43 REMARK 500 LYS A 229 133.27 -38.85 REMARK 500 ILE A 235 -178.02 -62.30 REMARK 500 LYS A 236 92.35 178.41 REMARK 500 VAL A 237 84.05 -60.11 REMARK 500 ARG A 255 -0.55 -55.12 REMARK 500 ALA A 259 40.29 -107.95 REMARK 500 GLU A 260 90.83 -168.22 REMARK 500 ASN A 298 -176.00 -60.38 REMARK 500 GLU A 299 168.56 177.09 REMARK 500 ASN A 325 167.12 -45.60 REMARK 500 ASP A 363 106.05 -58.62 REMARK 500 LEU B 8 -160.89 -124.03 REMARK 500 LEU B 11 30.04 -82.56 REMARK 500 LYS B 46 140.15 -37.03 REMARK 500 LYS B 48 94.57 40.89 REMARK 500 PRO B 128 -113.53 -43.92 REMARK 500 ASP B 136 -154.26 168.92 REMARK 500 VAL B 137 13.74 -39.18 REMARK 500 ILE B 172 -70.65 -98.94 REMARK 500 ASN B 184 42.18 39.89 REMARK 500 PHE B 198 -78.55 -65.19 REMARK 500 ASP B 200 14.49 -55.17 REMARK 500 ASP B 220 10.65 -66.95 REMARK 500 LYS B 227 -80.64 -6.27 REMARK 500 LEU B 248 66.74 -104.54 REMARK 500 ALA B 259 -140.80 60.91 REMARK 500 ALA B 290 -14.28 74.49 REMARK 500 LYS B 296 125.07 -172.43 REMARK 500 ASN B 298 -179.87 -69.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 134 -10.72 REMARK 500 ASP B 136 -16.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 1T11 A 1 389 UNP Q9KQS5 TIG_VIBCH 1 389 DBREF 1T11 B 1 389 UNP Q9KQS5 TIG_VIBCH 1 389 SEQADV 1T11 GLY A -2 UNP Q9KQS5 CLONING ARTIFACT SEQADV 1T11 SER A -1 UNP Q9KQS5 CLONING ARTIFACT SEQADV 1T11 HIS A 0 UNP Q9KQS5 CLONING ARTIFACT SEQADV 1T11 GLY B -2 UNP Q9KQS5 CLONING ARTIFACT SEQADV 1T11 SER B -1 UNP Q9KQS5 CLONING ARTIFACT SEQADV 1T11 HIS B 0 UNP Q9KQS5 CLONING ARTIFACT SEQRES 1 A 392 GLY SER HIS MET GLN VAL THR VAL GLU THR LEU GLU GLY SEQRES 2 A 392 LEU GLN ARG ARG LEU ASN ILE THR VAL PRO ALA ALA ASN SEQRES 3 A 392 ILE GLU ASP ALA VAL ALA ALA GLU LEU ARG ASN ILE ALA SEQRES 4 A 392 LYS ASN ARG ARG PHE ASP GLY PHE ARG LYS GLY LYS VAL SEQRES 5 A 392 PRO MET LYS MET VAL ALA LYS MET TYR GLY LYS ALA VAL SEQRES 6 A 392 ARG GLN ASP VAL LEU GLY GLU VAL MET GLN ARG HIS PHE SEQRES 7 A 392 ILE GLU ALA ILE VAL LYS GLU LYS ILE ASN PRO ALA GLY SEQRES 8 A 392 ALA PRO THR PHE ALA PRO VAL GLU ILE GLY GLU GLY LYS SEQRES 9 A 392 ASP LEU VAL PHE THR ALA THR PHE GLU VAL TYR PRO GLU SEQRES 10 A 392 VAL GLU LEU LYS GLY LEU GLU ASN ILE ALA VAL GLU LYS SEQRES 11 A 392 PRO ALA ALA GLU VAL THR ASP ALA ASP VAL ALA GLU MET SEQRES 12 A 392 LEU GLU THR LEU ARG LYS GLN GLN ALA THR TRP LYS GLU SEQRES 13 A 392 VAL ASP GLU ALA ALA GLU ASN GLY LYS ARG VAL SER ILE SEQRES 14 A 392 ASP PHE VAL GLY SER ILE ASP GLY VAL GLU PHE GLU GLY SEQRES 15 A 392 GLY LYS ALA GLU ASN PHE PRO LEU GLU MET GLY ALA GLY SEQRES 16 A 392 ARG MET ILE PRO GLY PHE GLU ASP GLY ILE VAL GLY LYS SEQRES 17 A 392 THR LYS GLY MET GLU PHE VAL ILE ASP VAL THR PHE PRO SEQRES 18 A 392 GLU ASP TYR HIS ALA GLU ASN LEU LYS GLY LYS ALA ALA SEQRES 19 A 392 LYS PHE ALA ILE LYS VAL ASN LYS VAL GLU ALA ARG GLU SEQRES 20 A 392 LEU PRO GLU LEU ASN ASP GLU PHE VAL ALA ARG PHE GLY SEQRES 21 A 392 VAL ALA GLU GLY GLY VAL ASP ALA LEU LYS ALA GLU VAL SEQRES 22 A 392 ARG LYS ASN MET GLU ARG GLU LEU LYS GLN ALA ILE LYS SEQRES 23 A 392 ALA ARG ILE LYS GLU GLN ALA ILE GLU GLY LEU VAL LYS SEQRES 24 A 392 GLU ASN GLU ILE GLN VAL PRO SER ALA LEU ILE ASP GLN SEQRES 25 A 392 GLU ILE ASN VAL LEU ARG GLN GLN ALA ALA GLN ARG PHE SEQRES 26 A 392 GLY GLY ASN VAL GLU ALA ALA ALA GLN LEU PRO ARG GLU SEQRES 27 A 392 LEU PHE GLU GLU GLN ALA LYS ARG ARG VAL VAL VAL GLY SEQRES 28 A 392 LEU LEU LEU GLY GLU VAL ILE ARG THR HIS GLU LEU LYS SEQRES 29 A 392 ALA ASP GLU GLU LYS VAL LYS ALA LEU ILE THR GLU MET SEQRES 30 A 392 ALA THR ALA TYR GLU ASP PRO SER GLU VAL VAL SER TYR SEQRES 31 A 392 TYR GLU SEQRES 1 B 392 GLY SER HIS MET GLN VAL THR VAL GLU THR LEU GLU GLY SEQRES 2 B 392 LEU GLN ARG ARG LEU ASN ILE THR VAL PRO ALA ALA ASN SEQRES 3 B 392 ILE GLU ASP ALA VAL ALA ALA GLU LEU ARG ASN ILE ALA SEQRES 4 B 392 LYS ASN ARG ARG PHE ASP GLY PHE ARG LYS GLY LYS VAL SEQRES 5 B 392 PRO MET LYS MET VAL ALA LYS MET TYR GLY LYS ALA VAL SEQRES 6 B 392 ARG GLN ASP VAL LEU GLY GLU VAL MET GLN ARG HIS PHE SEQRES 7 B 392 ILE GLU ALA ILE VAL LYS GLU LYS ILE ASN PRO ALA GLY SEQRES 8 B 392 ALA PRO THR PHE ALA PRO VAL GLU ILE GLY GLU GLY LYS SEQRES 9 B 392 ASP LEU VAL PHE THR ALA THR PHE GLU VAL TYR PRO GLU SEQRES 10 B 392 VAL GLU LEU LYS GLY LEU GLU ASN ILE ALA VAL GLU LYS SEQRES 11 B 392 PRO ALA ALA GLU VAL THR ASP ALA ASP VAL ALA GLU MET SEQRES 12 B 392 LEU GLU THR LEU ARG LYS GLN GLN ALA THR TRP LYS GLU SEQRES 13 B 392 VAL ASP GLU ALA ALA GLU ASN GLY LYS ARG VAL SER ILE SEQRES 14 B 392 ASP PHE VAL GLY SER ILE ASP GLY VAL GLU PHE GLU GLY SEQRES 15 B 392 GLY LYS ALA GLU ASN PHE PRO LEU GLU MET GLY ALA GLY SEQRES 16 B 392 ARG MET ILE PRO GLY PHE GLU ASP GLY ILE VAL GLY LYS SEQRES 17 B 392 THR LYS GLY MET GLU PHE VAL ILE ASP VAL THR PHE PRO SEQRES 18 B 392 GLU ASP TYR HIS ALA GLU ASN LEU LYS GLY LYS ALA ALA SEQRES 19 B 392 LYS PHE ALA ILE LYS VAL ASN LYS VAL GLU ALA ARG GLU SEQRES 20 B 392 LEU PRO GLU LEU ASN ASP GLU PHE VAL ALA ARG PHE GLY SEQRES 21 B 392 VAL ALA GLU GLY GLY VAL ASP ALA LEU LYS ALA GLU VAL SEQRES 22 B 392 ARG LYS ASN MET GLU ARG GLU LEU LYS GLN ALA ILE LYS SEQRES 23 B 392 ALA ARG ILE LYS GLU GLN ALA ILE GLU GLY LEU VAL LYS SEQRES 24 B 392 GLU ASN GLU ILE GLN VAL PRO SER ALA LEU ILE ASP GLN SEQRES 25 B 392 GLU ILE ASN VAL LEU ARG GLN GLN ALA ALA GLN ARG PHE SEQRES 26 B 392 GLY GLY ASN VAL GLU ALA ALA ALA GLN LEU PRO ARG GLU SEQRES 27 B 392 LEU PHE GLU GLU GLN ALA LYS ARG ARG VAL VAL VAL GLY SEQRES 28 B 392 LEU LEU LEU GLY GLU VAL ILE ARG THR HIS GLU LEU LYS SEQRES 29 B 392 ALA ASP GLU GLU LYS VAL LYS ALA LEU ILE THR GLU MET SEQRES 30 B 392 ALA THR ALA TYR GLU ASP PRO SER GLU VAL VAL SER TYR SEQRES 31 B 392 TYR GLU FORMUL 3 HOH *108(H2 O) HELIX 1 1 PRO A 20 LYS A 37 1 18 HELIX 2 2 PRO A 50 MET A 51 5 2 HELIX 3 3 MET A 53 ALA A 55 5 3 HELIX 4 4 MET A 57 MET A 57 5 1 HELIX 5 5 TYR A 58 GLU A 82 1 25 HELIX 6 6 ALA A 135 ALA A 149 1 15 HELIX 7 7 PHE A 198 ILE A 202 5 5 HELIX 8 8 ASP A 250 GLY A 257 5 8 HELIX 9 9 GLY A 261 GLU A 288 1 28 HELIX 10 10 PRO A 303 PHE A 322 1 20 HELIX 11 11 ASN A 325 ALA A 330 1 6 HELIX 12 12 GLN A 331 LEU A 332 5 2 HELIX 13 13 PRO A 333 LEU A 336 5 4 HELIX 14 14 PHE A 337 HIS A 358 1 22 HELIX 15 15 ASP A 363 ALA A 377 1 15 HELIX 16 16 PRO B 20 ARG B 39 1 20 HELIX 17 17 PRO B 50 GLU B 82 1 33 HELIX 18 18 VAL B 137 GLN B 148 1 12 HELIX 19 19 PHE B 198 ILE B 202 5 5 HELIX 20 20 ASN B 249 VAL B 253 5 5 HELIX 21 21 VAL B 258 GLU B 288 1 31 HELIX 22 22 PRO B 303 ARG B 321 1 19 HELIX 23 23 ASN B 325 LEU B 332 1 8 HELIX 24 24 ARG B 334 HIS B 358 1 25 HELIX 25 25 ASP B 363 THR B 376 1 14 SHEET 1 A 4 GLN A 2 THR A 7 0 SHEET 2 A 4 GLN A 12 VAL A 19 -1 O THR A 18 N GLN A 2 SHEET 3 A 4 LEU A 103 GLU A 110 -1 O LEU A 103 N VAL A 19 SHEET 4 A 4 THR A 91 GLU A 96 -1 N VAL A 95 O VAL A 104 SHEET 1 B 2 ALA A 124 GLU A 126 0 SHEET 2 B 2 ILE A 300 VAL A 302 1 O VAL A 302 N VAL A 125 SHEET 1 C 4 THR A 150 GLU A 153 0 SHEET 2 C 4 VAL A 237 GLU A 244 -1 O GLU A 244 N THR A 150 SHEET 3 C 4 ARG A 163 SER A 171 -1 N SER A 165 O LYS A 239 SHEET 4 C 4 LYS A 181 GLU A 188 -1 O PHE A 185 N ILE A 166 SHEET 1 D 5 THR A 150 GLU A 153 0 SHEET 2 D 5 VAL A 237 GLU A 244 -1 O GLU A 244 N THR A 150 SHEET 3 D 5 ARG A 163 SER A 171 -1 N SER A 165 O LYS A 239 SHEET 4 D 5 ALA A 230 PHE A 233 -1 O LYS A 232 N SER A 171 SHEET 5 D 5 ILE A 213 THR A 216 -1 N VAL A 215 O ALA A 231 SHEET 1 E 4 GLN B 2 THR B 7 0 SHEET 2 E 4 GLN B 12 VAL B 19 -1 O ARG B 14 N GLU B 6 SHEET 3 E 4 LEU B 103 GLU B 110 -1 O LEU B 103 N VAL B 19 SHEET 4 E 4 THR B 91 GLU B 96 -1 N GLU B 96 O VAL B 104 SHEET 1 F 2 ALA B 124 GLU B 126 0 SHEET 2 F 2 ILE B 300 VAL B 302 1 O ILE B 300 N VAL B 125 SHEET 1 G 4 THR B 150 GLU B 153 0 SHEET 2 G 4 ALA B 230 GLU B 244 -1 O ALA B 242 N LYS B 152 SHEET 3 G 4 ARG B 163 SER B 171 -1 N SER B 171 O LYS B 232 SHEET 4 G 4 LYS B 181 GLU B 188 -1 O LEU B 187 N VAL B 164 SHEET 1 H 3 THR B 150 GLU B 153 0 SHEET 2 H 3 ALA B 230 GLU B 244 -1 O ALA B 242 N LYS B 152 SHEET 3 H 3 GLU B 210 THR B 216 -1 N PHE B 211 O ILE B 235 CRYST1 189.860 189.860 62.060 90.00 90.00 90.00 I 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005267 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005267 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016113 0.00000