HEADER HYDROLASE 23-APR-04 1T2W TITLE CRYSTAL STRUCTURE OF SORTASE A IN COMPLEX WITH A LPETG PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASS A SORTASE SRTA; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: SORTASE A (RESIDUES 62-206) COMPLEXED WITH LPETG; COMPND 5 SYNONYM: LPXTG SPECIFIC SORTASE A,SORTASE,SORTASE A,SORTASE FAMILY COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PEPTIDE LEU-PRO-GLU-THR-GLY; COMPND 11 CHAIN: D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SRTA, SRTA_2, A7Q05_0203, A7U51_2758, DD547_02559, SOURCE 5 DQV53_14585, EP54_00580, EQ90_03180, ER624_01345, ERS365775_01887, SOURCE 6 FA040_11075, G6Y10_05930, GO814_08865, GZ145_04475, H4Q63_05340, SOURCE 7 HMPREF2819_05680, HMPREF3211_00152, HT539_09110, HW113_13780, SOURCE 8 HYH24_12580, LG33_14175, NCTC10654_02700, NCTC10988_02942, SOURCE 9 RK65_002860, SABB_01155, SAHC1340_00378, SAMEA103891215_00596, SOURCE 10 SAMEA103891286_01213, SAMEA103891321_01196, SAMEA1966928_00247, SOURCE 11 SAMEA1969845_01250, SAMEA1972827_00954, SAMEA2076218_00454, SOURCE 12 SAMEA2076226_00491, SAMEA2076235_01010, SAMEA2076464_00854, SOURCE 13 SAMEA2076470_01152, SAMEA2076472_01070, SAMEA2076475_01144, SOURCE 14 SAMEA2076481_00167, SAMEA2076758_00629, SAMEA2077031_00874, SOURCE 15 SAMEA2077046_00836, SAMEA2077832_00359, SAMEA2078252_01155, SOURCE 16 SAMEA2078307_01069, SAMEA2078308_00562, SAMEA2078558_00738, SOURCE 17 SAMEA2078569_01198, SAMEA2078588_01162, SAMEA2078824_00854, SOURCE 18 SAMEA2078837_00966, SAMEA2079048_01261, SAMEA2079512_01291, SOURCE 19 SAMEA2079517_02158, SAMEA2079727_00616, SAMEA2079728_00978, SOURCE 20 SAMEA2079949_00908, SAMEA2079951_00489, SAMEA2079957_00669, SOURCE 21 SAMEA2079958_00786, SAMEA2079968_00740, SAMEA2080812_00148, SOURCE 22 SAMEA2080900_00941, SAMEA2080904_01047, SAMEA2080913_01192, SOURCE 23 SAMEA2081043_00247, SAMEA2081054_00932, SAMEA2081211_00203, SOURCE 24 SAMEA2081362_00521, SAMEA2081458_00784, SAMEA2081475_00930, SOURCE 25 SAMEA4008573_00649, SAMEA4008676_00205, SAMEA958779_01435, SOURCE 26 SAMEA958793_00205, SAMEA958804_00204, SAMEA958836_00599, SOURCE 27 SAMEA958838_01748, SAMEA958987_01810; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 30 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: NOVAGEN PET 15B; SOURCE 33 MOL_ID: 2; SOURCE 34 SYNTHETIC: YES KEYWDS SORTASE, TRANSPEPTIDASE, BETA BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZONG,T.W.BICE,H.TON-THAT,O.SCHNEEWIND,S.V.NARAYANA REVDAT 4 23-AUG-23 1T2W 1 REMARK REVDAT 3 27-OCT-21 1T2W 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV SEQRES LINK SITE REVDAT 3 3 1 ATOM REVDAT 2 24-FEB-09 1T2W 1 VERSN REVDAT 1 07-SEP-04 1T2W 0 JRNL AUTH Y.ZONG,T.W.BICE,H.TON-THAT,O.SCHNEEWIND,S.V.NARAYANA JRNL TITL CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS SORTASE A AND ITS JRNL TITL 2 SUBSTRATE COMPLEX JRNL REF J.BIOL.CHEM. V. 279 31383 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15117963 JRNL DOI 10.1074/JBC.M401374200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 766432.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 74.8 REMARK 3 NUMBER OF REFLECTIONS : 34240 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2805 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 44.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2506 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE : 0.2200 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 280 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3398 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.74000 REMARK 3 B22 (A**2) : -4.55000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.53000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.02 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.06 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.035 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.230 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 57.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1T2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000022243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.35 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34240 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 27.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1T2O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MES, SODIUM REMARK 280 CHLORIDE, PH 6.35, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.33500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 62 REMARK 465 PRO B 63 REMARK 465 GLN B 64 REMARK 465 GLY B 167 REMARK 465 VAL B 168 REMARK 465 LEU B 169 REMARK 465 ASP B 170 REMARK 465 GLU B 171 REMARK 465 GLN B 172 REMARK 465 LYS B 173 REMARK 465 GLY B 174 REMARK 465 LYS B 175 REMARK 465 ASP B 176 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA ALA A 104 OXT GLY D 335 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY D 335 C GLY D 335 OXT 2.052 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 332 C - N - CD ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 129 -117.56 43.88 REMARK 500 ASP A 165 -21.36 77.08 REMARK 500 LEU A 169 91.62 -32.03 REMARK 500 ASP A 176 -174.85 91.88 REMARK 500 PRO B 66 151.21 -46.08 REMARK 500 GLN B 129 -116.72 43.67 REMARK 500 ASP B 186 67.03 62.07 REMARK 500 GLN C 129 -115.88 47.34 REMARK 500 ASN C 148 31.73 -98.68 REMARK 500 LYS C 190 -75.84 -73.27 REMARK 500 GLU D 333 -179.44 119.79 REMARK 500 THR D 334 -42.92 -136.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LEU D 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PRO D 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLU D 333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THR D 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLY D 335 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T20 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SE-SRTA, C184-ALA REMARK 900 RELATED ID: 1T2P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SORTASE A FROM STAPHYLOCOCCUS AUREUS DBREF 1T2W A 62 206 UNP Q9S446 Q9S446_STAAU 62 206 DBREF 1T2W B 62 206 UNP Q9S446 Q9S446_STAAU 62 206 DBREF 1T2W C 62 206 UNP Q9S446 Q9S446_STAAU 62 206 DBREF 1T2W D 331 335 PDB 1T2W 1T2W 331 335 SEQADV 1T2W ALA A 184 UNP Q9S446 CYS 184 ENGINEERED MUTATION SEQADV 1T2W ALA B 184 UNP Q9S446 CYS 184 ENGINEERED MUTATION SEQADV 1T2W ALA C 184 UNP Q9S446 CYS 184 ENGINEERED MUTATION SEQRES 1 A 145 LYS PRO GLN ILE PRO LYS ASP LYS SER LYS VAL ALA GLY SEQRES 2 A 145 TYR ILE GLU ILE PRO ASP ALA ASP ILE LYS GLU PRO VAL SEQRES 3 A 145 TYR PRO GLY PRO ALA THR PRO GLU GLN LEU ASN ARG GLY SEQRES 4 A 145 VAL SER PHE ALA GLU GLU ASN GLU SER LEU ASP ASP GLN SEQRES 5 A 145 ASN ILE SER ILE ALA GLY HIS THR PHE ILE ASP ARG PRO SEQRES 6 A 145 ASN TYR GLN PHE THR ASN LEU LYS ALA ALA LYS LYS GLY SEQRES 7 A 145 SER MET VAL TYR PHE LYS VAL GLY ASN GLU THR ARG LYS SEQRES 8 A 145 TYR LYS MET THR SER ILE ARG ASP VAL LYS PRO THR ASP SEQRES 9 A 145 VAL GLY VAL LEU ASP GLU GLN LYS GLY LYS ASP LYS GLN SEQRES 10 A 145 LEU THR LEU ILE THR ALA ASP ASP TYR ASN GLU LYS THR SEQRES 11 A 145 GLY VAL TRP GLU LYS ARG LYS ILE PHE VAL ALA THR GLU SEQRES 12 A 145 VAL LYS SEQRES 1 B 145 LYS PRO GLN ILE PRO LYS ASP LYS SER LYS VAL ALA GLY SEQRES 2 B 145 TYR ILE GLU ILE PRO ASP ALA ASP ILE LYS GLU PRO VAL SEQRES 3 B 145 TYR PRO GLY PRO ALA THR PRO GLU GLN LEU ASN ARG GLY SEQRES 4 B 145 VAL SER PHE ALA GLU GLU ASN GLU SER LEU ASP ASP GLN SEQRES 5 B 145 ASN ILE SER ILE ALA GLY HIS THR PHE ILE ASP ARG PRO SEQRES 6 B 145 ASN TYR GLN PHE THR ASN LEU LYS ALA ALA LYS LYS GLY SEQRES 7 B 145 SER MET VAL TYR PHE LYS VAL GLY ASN GLU THR ARG LYS SEQRES 8 B 145 TYR LYS MET THR SER ILE ARG ASP VAL LYS PRO THR ASP SEQRES 9 B 145 VAL GLY VAL LEU ASP GLU GLN LYS GLY LYS ASP LYS GLN SEQRES 10 B 145 LEU THR LEU ILE THR ALA ASP ASP TYR ASN GLU LYS THR SEQRES 11 B 145 GLY VAL TRP GLU LYS ARG LYS ILE PHE VAL ALA THR GLU SEQRES 12 B 145 VAL LYS SEQRES 1 C 145 LYS PRO GLN ILE PRO LYS ASP LYS SER LYS VAL ALA GLY SEQRES 2 C 145 TYR ILE GLU ILE PRO ASP ALA ASP ILE LYS GLU PRO VAL SEQRES 3 C 145 TYR PRO GLY PRO ALA THR PRO GLU GLN LEU ASN ARG GLY SEQRES 4 C 145 VAL SER PHE ALA GLU GLU ASN GLU SER LEU ASP ASP GLN SEQRES 5 C 145 ASN ILE SER ILE ALA GLY HIS THR PHE ILE ASP ARG PRO SEQRES 6 C 145 ASN TYR GLN PHE THR ASN LEU LYS ALA ALA LYS LYS GLY SEQRES 7 C 145 SER MET VAL TYR PHE LYS VAL GLY ASN GLU THR ARG LYS SEQRES 8 C 145 TYR LYS MET THR SER ILE ARG ASP VAL LYS PRO THR ASP SEQRES 9 C 145 VAL GLY VAL LEU ASP GLU GLN LYS GLY LYS ASP LYS GLN SEQRES 10 C 145 LEU THR LEU ILE THR ALA ASP ASP TYR ASN GLU LYS THR SEQRES 11 C 145 GLY VAL TRP GLU LYS ARG LYS ILE PHE VAL ALA THR GLU SEQRES 12 C 145 VAL LYS SEQRES 1 D 5 LEU PRO GLU THR GLY FORMUL 5 HOH *224(H2 O) HELIX 1 1 PRO A 79 ASP A 82 5 4 HELIX 2 2 THR A 93 GLY A 100 1 8 HELIX 3 3 ASN A 132 ALA A 136 5 5 HELIX 4 4 PRO B 79 ASP B 82 5 4 HELIX 5 5 THR B 93 GLY B 100 1 8 HELIX 6 6 ASN B 132 ALA B 136 5 5 HELIX 7 7 LYS B 162 VAL B 166 5 5 HELIX 8 8 PRO C 79 ASP C 82 5 4 HELIX 9 9 THR C 93 GLY C 100 1 8 HELIX 10 10 ASN C 132 ALA C 136 5 5 HELIX 11 11 LYS C 162 VAL C 166 5 5 SHEET 1 A 9 GLY A 74 ILE A 78 0 SHEET 2 A 9 ILE A 83 TYR A 88 -1 O VAL A 87 N GLY A 74 SHEET 3 A 9 VAL A 101 PHE A 103 1 O VAL A 101 N TYR A 88 SHEET 4 A 9 ASN A 114 HIS A 120 -1 O ALA A 118 N SER A 102 SHEET 5 A 9 GLN A 178 ASN A 188 1 O ALA A 184 N GLY A 119 SHEET 6 A 9 VAL A 193 GLU A 204 -1 O PHE A 200 N LEU A 181 SHEET 7 A 9 GLU A 149 VAL A 161 -1 N ILE A 158 O VAL A 201 SHEET 8 A 9 MET A 141 VAL A 146 -1 N PHE A 144 O ARG A 151 SHEET 9 A 9 GLY A 74 ILE A 78 -1 N TYR A 75 O LYS A 145 SHEET 1 B 8 ILE B 83 VAL B 87 0 SHEET 2 B 8 GLY B 74 ILE B 78 -1 N GLY B 74 O VAL B 87 SHEET 3 B 8 MET B 141 VAL B 146 -1 O TYR B 143 N GLU B 77 SHEET 4 B 8 GLU B 149 MET B 155 -1 O ARG B 151 N PHE B 144 SHEET 5 B 8 VAL B 193 GLU B 204 -1 O THR B 203 N LYS B 154 SHEET 6 B 8 GLN B 178 ASN B 188 -1 N ASN B 188 O VAL B 193 SHEET 7 B 8 ASN B 114 HIS B 120 1 N ILE B 115 O THR B 180 SHEET 8 B 8 SER B 102 PHE B 103 -1 N SER B 102 O ALA B 118 SHEET 1 C 8 ILE C 83 VAL C 87 0 SHEET 2 C 8 GLY C 74 ILE C 78 -1 N GLY C 74 O VAL C 87 SHEET 3 C 8 MET C 141 VAL C 146 -1 O LYS C 145 N TYR C 75 SHEET 4 C 8 GLU C 149 MET C 155 -1 O ARG C 151 N PHE C 144 SHEET 5 C 8 VAL C 193 GLU C 204 -1 O THR C 203 N LYS C 154 SHEET 6 C 8 GLN C 178 ASN C 188 -1 N LEU C 181 O PHE C 200 SHEET 7 C 8 ASN C 114 HIS C 120 1 N ILE C 115 O THR C 180 SHEET 8 C 8 SER C 102 PHE C 103 -1 N SER C 102 O ALA C 118 LINK C LEU D 331 N PRO D 332 1555 1555 1.33 LINK C PRO D 332 N GLU D 333 1555 1555 1.33 LINK C GLU D 333 N THR D 334 1555 1555 1.35 LINK C THR D 334 N GLY D 335 1555 1555 1.33 CISPEP 1 GLY A 90 PRO A 91 0 -0.05 CISPEP 2 GLY B 90 PRO B 91 0 0.32 CISPEP 3 GLY C 90 PRO C 91 0 0.70 SITE 1 AC1 3 GLN A 172 PRO D 332 GLU D 333 SITE 1 AC2 3 LEU A 169 LEU D 331 GLU D 333 SITE 1 AC3 8 GLU A 105 SER A 116 ILE A 182 ARG A 197 SITE 2 AC3 8 LEU D 331 PRO D 332 THR D 334 HOH A 366 SITE 1 AC4 4 ILE A 182 ARG A 197 GLU D 333 GLY D 335 SITE 1 AC5 5 ALA A 92 ALA A 104 ALA A 118 TRP A 194 SITE 2 AC5 5 THR D 334 CRYST1 45.640 82.670 56.290 90.00 103.96 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021911 0.000000 0.005447 0.00000 SCALE2 0.000000 0.012096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018306 0.00000