data_1T8I # _entry.id 1T8I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T8I pdb_00001t8i 10.2210/pdb1t8i/pdb NDB PD0549 ? ? RCSB RCSB022444 ? ? WWPDB D_1000022444 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-31 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2023-08-23 6 'Structure model' 1 5 2023-11-15 7 'Structure model' 1 6 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Data collection' 9 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 7 'Structure model' pdbx_entry_details 12 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_dist_value' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 5 'Structure model' '_struct_ref_seq_dif.details' 22 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 25 6 'Structure model' '_chem_comp_atom.atom_id' 26 6 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T8I _pdbx_database_status.recvd_initial_deposition_date 2004-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1K4T _pdbx_database_related.details 'same protein, same DNA' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Staker, B.L.' 1 'Feese, M.D.' 2 'Cushman, M.' 3 'Pommier, Y.' 4 'Zembower, D.' 5 'Stewart, L.' 6 'Burgin, A.B.' 7 # _citation.id primary _citation.title 'Structures of three classes of anticancer agents bound to the human topoisomerase I-DNA covalent complex' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 48 _citation.page_first 2336 _citation.page_last 2345 _citation.year 2005 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15801827 _citation.pdbx_database_id_DOI 10.1021/jm049146p # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Staker, B.L.' 1 ? primary 'Feese, M.D.' 2 ? primary 'Cushman, M.' 3 ? primary 'Pommier, Y.' 4 ? primary 'Zembower, D.' 5 ? primary 'Stewart, L.' 6 ? primary 'Burgin, A.B.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3'" 3061.057 1 ? ? ? ? 2 polymer syn "5'-D(*(TGP)P*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3'" 3716.518 1 ? ? ? ? 3 polymer syn "5'-D(*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*CP*AP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3'" 6690.362 1 ? ? ? ? 4 polymer man 'DNA topoisomerase I' 70248.023 1 5.99.1.2 ? ? ? 5 non-polymer syn '4-ETHYL-4-HYDROXY-1,12-DIHYDRO-4H-2-OXA-6,12A-DIAZA-DIBENZO[B,H]FLUORENE-3,13-DIONE' 348.352 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DA)(DA)(DG)(DA)(DC)(DT)(DT)' AAAAAGACTT B ? 2 polydeoxyribonucleotide no yes '(TGP)(DG)(DA)(DA)(DA)(DA)(DA)(DT)(DT)(DT)(DT)(DT)' GGAAAAATTTTT C ? 3 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DA)(DA)(DT)(DT)(DT)(DT)(DT)(DC)(DC)(DA)(DA)(DG)(DT)(DC)(DT)(DT)(DT) (DT)(DT) ; AAAAATTTTTCCAAGTCTTTTT D ? 4 'polypeptide(L)' no yes ;KKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKA EEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEK LLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWL VSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEK EEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGIL NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDA KKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLN(PTR)LDPRIT VAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF ; ;KKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKA EEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEK LLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWL VSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEK EEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGIL NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDA KKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWC KKWGVPIEKIYNKTQREKFAWAIDMADEDYEF ; A ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name '4-ETHYL-4-HYDROXY-1,12-DIHYDRO-4H-2-OXA-6,12A-DIAZA-DIBENZO[B,H]FLUORENE-3,13-DIONE' _pdbx_entity_nonpoly.comp_id EHD # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DA n 1 4 DA n 1 5 DA n 1 6 DG n 1 7 DA n 1 8 DC n 1 9 DT n 1 10 DT n 2 1 TGP n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DT n 2 10 DT n 2 11 DT n 2 12 DT n 3 1 DA n 3 2 DA n 3 3 DA n 3 4 DA n 3 5 DA n 3 6 DT n 3 7 DT n 3 8 DT n 3 9 DT n 3 10 DT n 3 11 DC n 3 12 DC n 3 13 DA n 3 14 DA n 3 15 DG n 3 16 DT n 3 17 DC n 3 18 DT n 3 19 DT n 3 20 DT n 3 21 DT n 3 22 DT n 4 1 LYS n 4 2 LYS n 4 3 PRO n 4 4 LYS n 4 5 ASN n 4 6 LYS n 4 7 ASP n 4 8 LYS n 4 9 ASP n 4 10 LYS n 4 11 LYS n 4 12 VAL n 4 13 PRO n 4 14 GLU n 4 15 PRO n 4 16 ASP n 4 17 ASN n 4 18 LYS n 4 19 LYS n 4 20 LYS n 4 21 LYS n 4 22 PRO n 4 23 LYS n 4 24 LYS n 4 25 GLU n 4 26 GLU n 4 27 GLU n 4 28 GLN n 4 29 LYS n 4 30 TRP n 4 31 LYS n 4 32 TRP n 4 33 TRP n 4 34 GLU n 4 35 GLU n 4 36 GLU n 4 37 ARG n 4 38 TYR n 4 39 PRO n 4 40 GLU n 4 41 GLY n 4 42 ILE n 4 43 LYS n 4 44 TRP n 4 45 LYS n 4 46 PHE n 4 47 LEU n 4 48 GLU n 4 49 HIS n 4 50 LYS n 4 51 GLY n 4 52 PRO n 4 53 VAL n 4 54 PHE n 4 55 ALA n 4 56 PRO n 4 57 PRO n 4 58 TYR n 4 59 GLU n 4 60 PRO n 4 61 LEU n 4 62 PRO n 4 63 GLU n 4 64 ASN n 4 65 VAL n 4 66 LYS n 4 67 PHE n 4 68 TYR n 4 69 TYR n 4 70 ASP n 4 71 GLY n 4 72 LYS n 4 73 VAL n 4 74 MET n 4 75 LYS n 4 76 LEU n 4 77 SER n 4 78 PRO n 4 79 LYS n 4 80 ALA n 4 81 GLU n 4 82 GLU n 4 83 VAL n 4 84 ALA n 4 85 THR n 4 86 PHE n 4 87 PHE n 4 88 ALA n 4 89 LYS n 4 90 MET n 4 91 LEU n 4 92 ASP n 4 93 HIS n 4 94 GLU n 4 95 TYR n 4 96 THR n 4 97 THR n 4 98 LYS n 4 99 GLU n 4 100 ILE n 4 101 PHE n 4 102 ARG n 4 103 LYS n 4 104 ASN n 4 105 PHE n 4 106 PHE n 4 107 LYS n 4 108 ASP n 4 109 TRP n 4 110 ARG n 4 111 LYS n 4 112 GLU n 4 113 MET n 4 114 THR n 4 115 ASN n 4 116 GLU n 4 117 GLU n 4 118 LYS n 4 119 ASN n 4 120 ILE n 4 121 ILE n 4 122 THR n 4 123 ASN n 4 124 LEU n 4 125 SER n 4 126 LYS n 4 127 CYS n 4 128 ASP n 4 129 PHE n 4 130 THR n 4 131 GLN n 4 132 MET n 4 133 SER n 4 134 GLN n 4 135 TYR n 4 136 PHE n 4 137 LYS n 4 138 ALA n 4 139 GLN n 4 140 THR n 4 141 GLU n 4 142 ALA n 4 143 ARG n 4 144 LYS n 4 145 GLN n 4 146 MET n 4 147 SER n 4 148 LYS n 4 149 GLU n 4 150 GLU n 4 151 LYS n 4 152 LEU n 4 153 LYS n 4 154 ILE n 4 155 LYS n 4 156 GLU n 4 157 GLU n 4 158 ASN n 4 159 GLU n 4 160 LYS n 4 161 LEU n 4 162 LEU n 4 163 LYS n 4 164 GLU n 4 165 TYR n 4 166 GLY n 4 167 PHE n 4 168 CYS n 4 169 ILE n 4 170 MET n 4 171 ASP n 4 172 ASN n 4 173 HIS n 4 174 LYS n 4 175 GLU n 4 176 ARG n 4 177 ILE n 4 178 ALA n 4 179 ASN n 4 180 PHE n 4 181 LYS n 4 182 ILE n 4 183 GLU n 4 184 PRO n 4 185 PRO n 4 186 GLY n 4 187 LEU n 4 188 PHE n 4 189 ARG n 4 190 GLY n 4 191 ARG n 4 192 GLY n 4 193 ASN n 4 194 HIS n 4 195 PRO n 4 196 LYS n 4 197 MET n 4 198 GLY n 4 199 MET n 4 200 LEU n 4 201 LYS n 4 202 ARG n 4 203 ARG n 4 204 ILE n 4 205 MET n 4 206 PRO n 4 207 GLU n 4 208 ASP n 4 209 ILE n 4 210 ILE n 4 211 ILE n 4 212 ASN n 4 213 CYS n 4 214 SER n 4 215 LYS n 4 216 ASP n 4 217 ALA n 4 218 LYS n 4 219 VAL n 4 220 PRO n 4 221 SER n 4 222 PRO n 4 223 PRO n 4 224 PRO n 4 225 GLY n 4 226 HIS n 4 227 LYS n 4 228 TRP n 4 229 LYS n 4 230 GLU n 4 231 VAL n 4 232 ARG n 4 233 HIS n 4 234 ASP n 4 235 ASN n 4 236 LYS n 4 237 VAL n 4 238 THR n 4 239 TRP n 4 240 LEU n 4 241 VAL n 4 242 SER n 4 243 TRP n 4 244 THR n 4 245 GLU n 4 246 ASN n 4 247 ILE n 4 248 GLN n 4 249 GLY n 4 250 SER n 4 251 ILE n 4 252 LYS n 4 253 TYR n 4 254 ILE n 4 255 MET n 4 256 LEU n 4 257 ASN n 4 258 PRO n 4 259 SER n 4 260 SER n 4 261 ARG n 4 262 ILE n 4 263 LYS n 4 264 GLY n 4 265 GLU n 4 266 LYS n 4 267 ASP n 4 268 TRP n 4 269 GLN n 4 270 LYS n 4 271 TYR n 4 272 GLU n 4 273 THR n 4 274 ALA n 4 275 ARG n 4 276 ARG n 4 277 LEU n 4 278 LYS n 4 279 LYS n 4 280 CYS n 4 281 VAL n 4 282 ASP n 4 283 LYS n 4 284 ILE n 4 285 ARG n 4 286 ASN n 4 287 GLN n 4 288 TYR n 4 289 ARG n 4 290 GLU n 4 291 ASP n 4 292 TRP n 4 293 LYS n 4 294 SER n 4 295 LYS n 4 296 GLU n 4 297 MET n 4 298 LYS n 4 299 VAL n 4 300 ARG n 4 301 GLN n 4 302 ARG n 4 303 ALA n 4 304 VAL n 4 305 ALA n 4 306 LEU n 4 307 TYR n 4 308 PHE n 4 309 ILE n 4 310 ASP n 4 311 LYS n 4 312 LEU n 4 313 ALA n 4 314 LEU n 4 315 ARG n 4 316 ALA n 4 317 GLY n 4 318 ASN n 4 319 GLU n 4 320 LYS n 4 321 GLU n 4 322 GLU n 4 323 GLY n 4 324 GLU n 4 325 THR n 4 326 ALA n 4 327 ASP n 4 328 THR n 4 329 VAL n 4 330 GLY n 4 331 CYS n 4 332 CYS n 4 333 SER n 4 334 LEU n 4 335 ARG n 4 336 VAL n 4 337 GLU n 4 338 HIS n 4 339 ILE n 4 340 ASN n 4 341 LEU n 4 342 HIS n 4 343 PRO n 4 344 GLU n 4 345 LEU n 4 346 ASP n 4 347 GLY n 4 348 GLN n 4 349 GLU n 4 350 TYR n 4 351 VAL n 4 352 VAL n 4 353 GLU n 4 354 PHE n 4 355 ASP n 4 356 PHE n 4 357 LEU n 4 358 GLY n 4 359 LYS n 4 360 ASP n 4 361 SER n 4 362 ILE n 4 363 ARG n 4 364 TYR n 4 365 TYR n 4 366 ASN n 4 367 LYS n 4 368 VAL n 4 369 PRO n 4 370 VAL n 4 371 GLU n 4 372 LYS n 4 373 ARG n 4 374 VAL n 4 375 PHE n 4 376 LYS n 4 377 ASN n 4 378 LEU n 4 379 GLN n 4 380 LEU n 4 381 PHE n 4 382 MET n 4 383 GLU n 4 384 ASN n 4 385 LYS n 4 386 GLN n 4 387 PRO n 4 388 GLU n 4 389 ASP n 4 390 ASP n 4 391 LEU n 4 392 PHE n 4 393 ASP n 4 394 ARG n 4 395 LEU n 4 396 ASN n 4 397 THR n 4 398 GLY n 4 399 ILE n 4 400 LEU n 4 401 ASN n 4 402 LYS n 4 403 HIS n 4 404 LEU n 4 405 GLN n 4 406 ASP n 4 407 LEU n 4 408 MET n 4 409 GLU n 4 410 GLY n 4 411 LEU n 4 412 THR n 4 413 ALA n 4 414 LYS n 4 415 VAL n 4 416 PHE n 4 417 ARG n 4 418 THR n 4 419 TYR n 4 420 ASN n 4 421 ALA n 4 422 SER n 4 423 ILE n 4 424 THR n 4 425 LEU n 4 426 GLN n 4 427 GLN n 4 428 GLN n 4 429 LEU n 4 430 LYS n 4 431 GLU n 4 432 LEU n 4 433 THR n 4 434 ALA n 4 435 PRO n 4 436 ASP n 4 437 GLU n 4 438 ASN n 4 439 ILE n 4 440 PRO n 4 441 ALA n 4 442 LYS n 4 443 ILE n 4 444 LEU n 4 445 SER n 4 446 TYR n 4 447 ASN n 4 448 ARG n 4 449 ALA n 4 450 ASN n 4 451 ARG n 4 452 ALA n 4 453 VAL n 4 454 ALA n 4 455 ILE n 4 456 LEU n 4 457 CYS n 4 458 ASN n 4 459 HIS n 4 460 GLN n 4 461 ARG n 4 462 ALA n 4 463 PRO n 4 464 PRO n 4 465 LYS n 4 466 THR n 4 467 PHE n 4 468 GLU n 4 469 LYS n 4 470 SER n 4 471 MET n 4 472 MET n 4 473 ASN n 4 474 LEU n 4 475 GLN n 4 476 THR n 4 477 LYS n 4 478 ILE n 4 479 ASP n 4 480 ALA n 4 481 LYS n 4 482 LYS n 4 483 GLU n 4 484 GLN n 4 485 LEU n 4 486 ALA n 4 487 ASP n 4 488 ALA n 4 489 ARG n 4 490 ARG n 4 491 ASP n 4 492 LEU n 4 493 LYS n 4 494 SER n 4 495 ALA n 4 496 LYS n 4 497 ALA n 4 498 ASP n 4 499 ALA n 4 500 LYS n 4 501 VAL n 4 502 MET n 4 503 LYS n 4 504 ASP n 4 505 ALA n 4 506 LYS n 4 507 THR n 4 508 LYS n 4 509 LYS n 4 510 VAL n 4 511 VAL n 4 512 GLU n 4 513 SER n 4 514 LYS n 4 515 LYS n 4 516 LYS n 4 517 ALA n 4 518 VAL n 4 519 GLN n 4 520 ARG n 4 521 LEU n 4 522 GLU n 4 523 GLU n 4 524 GLN n 4 525 LEU n 4 526 MET n 4 527 LYS n 4 528 LEU n 4 529 GLU n 4 530 VAL n 4 531 GLN n 4 532 ALA n 4 533 THR n 4 534 ASP n 4 535 ARG n 4 536 GLU n 4 537 GLU n 4 538 ASN n 4 539 LYS n 4 540 GLN n 4 541 ILE n 4 542 ALA n 4 543 LEU n 4 544 GLY n 4 545 THR n 4 546 SER n 4 547 LYS n 4 548 LEU n 4 549 ASN n 4 550 PTR n 4 551 LEU n 4 552 ASP n 4 553 PRO n 4 554 ARG n 4 555 ILE n 4 556 THR n 4 557 VAL n 4 558 ALA n 4 559 TRP n 4 560 CYS n 4 561 LYS n 4 562 LYS n 4 563 TRP n 4 564 GLY n 4 565 VAL n 4 566 PRO n 4 567 ILE n 4 568 GLU n 4 569 LYS n 4 570 ILE n 4 571 TYR n 4 572 ASN n 4 573 LYS n 4 574 THR n 4 575 GLN n 4 576 ARG n 4 577 GLU n 4 578 LYS n 4 579 PHE n 4 580 ALA n 4 581 TRP n 4 582 ALA n 4 583 ILE n 4 584 ASP n 4 585 MET n 4 586 ALA n 4 587 ASP n 4 588 GLU n 4 589 ASP n 4 590 TYR n 4 591 GLU n 4 592 PHE n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TOP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus Spodoptera _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EHD non-polymer . '4-ETHYL-4-HYDROXY-1,12-DIHYDRO-4H-2-OXA-6,12A-DIAZA-DIBENZO[B,H]FLUORENE-3,13-DIONE' CAMPTOTHECIN 'C20 H16 N2 O4' 348.352 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TGP 'DNA linking' n ;5'-THIO-2'-DEOXY-GUANOSINE PHOSPHONIC ACID ; ? 'C10 H14 N5 O6 P S' 363.287 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A B . n A 1 2 DA 2 2 2 DA A B . n A 1 3 DA 3 3 3 DA A B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DA 5 5 5 DA A B . n A 1 6 DG 6 6 6 DG G B . n A 1 7 DA 7 7 7 DA A B . n A 1 8 DC 8 8 8 DC C B . n A 1 9 DT 9 9 9 DT T B . n A 1 10 DT 10 10 10 DT T B . n B 2 1 TGP 1 11 11 TGP TGP C . n B 2 2 DG 2 12 12 DG G C . n B 2 3 DA 3 13 13 DA A C . n B 2 4 DA 4 14 14 DA A C . n B 2 5 DA 5 15 15 DA A C . n B 2 6 DA 6 16 16 DA A C . n B 2 7 DA 7 17 17 DA A C . n B 2 8 DT 8 18 18 DT T C . n B 2 9 DT 9 19 19 DT T C . n B 2 10 DT 10 20 20 DT T C . n B 2 11 DT 11 21 21 DT T C . n B 2 12 DT 12 22 22 DT T C . n C 3 1 DA 1 101 101 DA A D . n C 3 2 DA 2 102 102 DA A D . n C 3 3 DA 3 103 103 DA A D . n C 3 4 DA 4 104 104 DA A D . n C 3 5 DA 5 105 105 DA A D . n C 3 6 DT 6 106 106 DT T D . n C 3 7 DT 7 107 107 DT T D . n C 3 8 DT 8 108 108 DT T D . n C 3 9 DT 9 109 109 DT T D . n C 3 10 DT 10 110 110 DT T D . n C 3 11 DC 11 111 111 DC C D . n C 3 12 DC 12 112 112 DC C D . n C 3 13 DA 13 113 113 DA A D . n C 3 14 DA 14 114 114 DA A D . n C 3 15 DG 15 115 115 DG G D . n C 3 16 DT 16 116 116 DT T D . n C 3 17 DC 17 117 117 DC C D . n C 3 18 DT 18 118 118 DT T D . n C 3 19 DT 19 119 119 DT T D . n C 3 20 DT 20 120 120 DT T D . n C 3 21 DT 21 121 121 DT T D . n C 3 22 DT 22 122 122 DT T D . n D 4 1 LYS 1 174 ? ? ? A . n D 4 2 LYS 2 175 ? ? ? A . n D 4 3 PRO 3 176 ? ? ? A . n D 4 4 LYS 4 177 ? ? ? A . n D 4 5 ASN 5 178 ? ? ? A . n D 4 6 LYS 6 179 ? ? ? A . n D 4 7 ASP 7 180 ? ? ? A . n D 4 8 LYS 8 181 ? ? ? A . n D 4 9 ASP 9 182 ? ? ? A . n D 4 10 LYS 10 183 ? ? ? A . n D 4 11 LYS 11 184 ? ? ? A . n D 4 12 VAL 12 185 ? ? ? A . n D 4 13 PRO 13 186 ? ? ? A . n D 4 14 GLU 14 187 ? ? ? A . n D 4 15 PRO 15 188 ? ? ? A . n D 4 16 ASP 16 189 ? ? ? A . n D 4 17 ASN 17 190 ? ? ? A . n D 4 18 LYS 18 191 ? ? ? A . n D 4 19 LYS 19 192 ? ? ? A . n D 4 20 LYS 20 193 ? ? ? A . n D 4 21 LYS 21 194 ? ? ? A . n D 4 22 PRO 22 195 ? ? ? A . n D 4 23 LYS 23 196 ? ? ? A . n D 4 24 LYS 24 197 ? ? ? A . n D 4 25 GLU 25 198 ? ? ? A . n D 4 26 GLU 26 199 ? ? ? A . n D 4 27 GLU 27 200 ? ? ? A . n D 4 28 GLN 28 201 201 GLN GLN A . n D 4 29 LYS 29 202 202 LYS LYS A . n D 4 30 TRP 30 203 203 TRP TRP A . n D 4 31 LYS 31 204 204 LYS LYS A . n D 4 32 TRP 32 205 205 TRP TRP A . n D 4 33 TRP 33 206 206 TRP TRP A . n D 4 34 GLU 34 207 207 GLU GLU A . n D 4 35 GLU 35 208 208 GLU GLU A . n D 4 36 GLU 36 209 209 GLU GLU A . n D 4 37 ARG 37 210 210 ARG ARG A . n D 4 38 TYR 38 211 211 TYR TYR A . n D 4 39 PRO 39 212 212 PRO PRO A . n D 4 40 GLU 40 213 213 GLU GLU A . n D 4 41 GLY 41 214 214 GLY GLY A . n D 4 42 ILE 42 215 215 ILE ILE A . n D 4 43 LYS 43 216 216 LYS LYS A . n D 4 44 TRP 44 217 217 TRP TRP A . n D 4 45 LYS 45 218 218 LYS LYS A . n D 4 46 PHE 46 219 219 PHE PHE A . n D 4 47 LEU 47 220 220 LEU LEU A . n D 4 48 GLU 48 221 221 GLU GLU A . n D 4 49 HIS 49 222 222 HIS HIS A . n D 4 50 LYS 50 223 223 LYS LYS A . n D 4 51 GLY 51 224 224 GLY GLY A . n D 4 52 PRO 52 225 225 PRO PRO A . n D 4 53 VAL 53 226 226 VAL VAL A . n D 4 54 PHE 54 227 227 PHE PHE A . n D 4 55 ALA 55 228 228 ALA ALA A . n D 4 56 PRO 56 229 229 PRO PRO A . n D 4 57 PRO 57 230 230 PRO PRO A . n D 4 58 TYR 58 231 231 TYR TYR A . n D 4 59 GLU 59 232 232 GLU GLU A . n D 4 60 PRO 60 233 233 PRO PRO A . n D 4 61 LEU 61 234 234 LEU LEU A . n D 4 62 PRO 62 235 235 PRO PRO A . n D 4 63 GLU 63 236 236 GLU GLU A . n D 4 64 ASN 64 237 237 ASN ASN A . n D 4 65 VAL 65 238 238 VAL VAL A . n D 4 66 LYS 66 239 239 LYS LYS A . n D 4 67 PHE 67 240 240 PHE PHE A . n D 4 68 TYR 68 241 241 TYR TYR A . n D 4 69 TYR 69 242 242 TYR TYR A . n D 4 70 ASP 70 243 243 ASP ASP A . n D 4 71 GLY 71 244 244 GLY GLY A . n D 4 72 LYS 72 245 245 LYS LYS A . n D 4 73 VAL 73 246 246 VAL VAL A . n D 4 74 MET 74 247 247 MET MET A . n D 4 75 LYS 75 248 248 LYS LYS A . n D 4 76 LEU 76 249 249 LEU LEU A . n D 4 77 SER 77 250 250 SER SER A . n D 4 78 PRO 78 251 251 PRO PRO A . n D 4 79 LYS 79 252 252 LYS LYS A . n D 4 80 ALA 80 253 253 ALA ALA A . n D 4 81 GLU 81 254 254 GLU GLU A . n D 4 82 GLU 82 255 255 GLU GLU A . n D 4 83 VAL 83 256 256 VAL VAL A . n D 4 84 ALA 84 257 257 ALA ALA A . n D 4 85 THR 85 258 258 THR THR A . n D 4 86 PHE 86 259 259 PHE PHE A . n D 4 87 PHE 87 260 260 PHE PHE A . n D 4 88 ALA 88 261 261 ALA ALA A . n D 4 89 LYS 89 262 262 LYS LYS A . n D 4 90 MET 90 263 263 MET MET A . n D 4 91 LEU 91 264 264 LEU LEU A . n D 4 92 ASP 92 265 265 ASP ASP A . n D 4 93 HIS 93 266 266 HIS HIS A . n D 4 94 GLU 94 267 267 GLU GLU A . n D 4 95 TYR 95 268 268 TYR TYR A . n D 4 96 THR 96 269 269 THR THR A . n D 4 97 THR 97 270 270 THR THR A . n D 4 98 LYS 98 271 271 LYS LYS A . n D 4 99 GLU 99 272 272 GLU GLU A . n D 4 100 ILE 100 273 273 ILE ILE A . n D 4 101 PHE 101 274 274 PHE PHE A . n D 4 102 ARG 102 275 275 ARG ARG A . n D 4 103 LYS 103 276 276 LYS LYS A . n D 4 104 ASN 104 277 277 ASN ASN A . n D 4 105 PHE 105 278 278 PHE PHE A . n D 4 106 PHE 106 279 279 PHE PHE A . n D 4 107 LYS 107 280 280 LYS LYS A . n D 4 108 ASP 108 281 281 ASP ASP A . n D 4 109 TRP 109 282 282 TRP TRP A . n D 4 110 ARG 110 283 283 ARG ARG A . n D 4 111 LYS 111 284 284 LYS LYS A . n D 4 112 GLU 112 285 285 GLU GLU A . n D 4 113 MET 113 286 286 MET MET A . n D 4 114 THR 114 287 287 THR THR A . n D 4 115 ASN 115 288 288 ASN ASN A . n D 4 116 GLU 116 289 289 GLU GLU A . n D 4 117 GLU 117 290 290 GLU GLU A . n D 4 118 LYS 118 291 291 LYS LYS A . n D 4 119 ASN 119 292 292 ASN ASN A . n D 4 120 ILE 120 293 293 ILE ILE A . n D 4 121 ILE 121 294 294 ILE ILE A . n D 4 122 THR 122 295 295 THR THR A . n D 4 123 ASN 123 296 296 ASN ASN A . n D 4 124 LEU 124 297 297 LEU LEU A . n D 4 125 SER 125 298 298 SER SER A . n D 4 126 LYS 126 299 299 LYS LYS A . n D 4 127 CYS 127 300 300 CYS CYS A . n D 4 128 ASP 128 301 301 ASP ASP A . n D 4 129 PHE 129 302 302 PHE PHE A . n D 4 130 THR 130 303 303 THR THR A . n D 4 131 GLN 131 304 304 GLN GLN A . n D 4 132 MET 132 305 305 MET MET A . n D 4 133 SER 133 306 306 SER SER A . n D 4 134 GLN 134 307 307 GLN GLN A . n D 4 135 TYR 135 308 308 TYR TYR A . n D 4 136 PHE 136 309 309 PHE PHE A . n D 4 137 LYS 137 310 310 LYS LYS A . n D 4 138 ALA 138 311 311 ALA ALA A . n D 4 139 GLN 139 312 312 GLN GLN A . n D 4 140 THR 140 313 313 THR THR A . n D 4 141 GLU 141 314 314 GLU GLU A . n D 4 142 ALA 142 315 315 ALA ALA A . n D 4 143 ARG 143 316 316 ARG ARG A . n D 4 144 LYS 144 317 317 LYS LYS A . n D 4 145 GLN 145 318 318 GLN GLN A . n D 4 146 MET 146 319 319 MET MET A . n D 4 147 SER 147 320 320 SER SER A . n D 4 148 LYS 148 321 321 LYS LYS A . n D 4 149 GLU 149 322 322 GLU GLU A . n D 4 150 GLU 150 323 323 GLU GLU A . n D 4 151 LYS 151 324 324 LYS LYS A . n D 4 152 LEU 152 325 325 LEU LEU A . n D 4 153 LYS 153 326 326 LYS LYS A . n D 4 154 ILE 154 327 327 ILE ILE A . n D 4 155 LYS 155 328 328 LYS LYS A . n D 4 156 GLU 156 329 329 GLU GLU A . n D 4 157 GLU 157 330 330 GLU GLU A . n D 4 158 ASN 158 331 331 ASN ASN A . n D 4 159 GLU 159 332 332 GLU GLU A . n D 4 160 LYS 160 333 333 LYS LYS A . n D 4 161 LEU 161 334 334 LEU LEU A . n D 4 162 LEU 162 335 335 LEU LEU A . n D 4 163 LYS 163 336 336 LYS LYS A . n D 4 164 GLU 164 337 337 GLU GLU A . n D 4 165 TYR 165 338 338 TYR TYR A . n D 4 166 GLY 166 339 339 GLY GLY A . n D 4 167 PHE 167 340 340 PHE PHE A . n D 4 168 CYS 168 341 341 CYS CYS A . n D 4 169 ILE 169 342 342 ILE ILE A . n D 4 170 MET 170 343 343 MET MET A . n D 4 171 ASP 171 344 344 ASP ASP A . n D 4 172 ASN 172 345 345 ASN ASN A . n D 4 173 HIS 173 346 346 HIS HIS A . n D 4 174 LYS 174 347 347 LYS LYS A . n D 4 175 GLU 175 348 348 GLU GLU A . n D 4 176 ARG 176 349 349 ARG ARG A . n D 4 177 ILE 177 350 350 ILE ILE A . n D 4 178 ALA 178 351 351 ALA ALA A . n D 4 179 ASN 179 352 352 ASN ASN A . n D 4 180 PHE 180 353 353 PHE PHE A . n D 4 181 LYS 181 354 354 LYS LYS A . n D 4 182 ILE 182 355 355 ILE ILE A . n D 4 183 GLU 183 356 356 GLU GLU A . n D 4 184 PRO 184 357 357 PRO PRO A . n D 4 185 PRO 185 358 358 PRO PRO A . n D 4 186 GLY 186 359 359 GLY GLY A . n D 4 187 LEU 187 360 360 LEU LEU A . n D 4 188 PHE 188 361 361 PHE PHE A . n D 4 189 ARG 189 362 362 ARG ARG A . n D 4 190 GLY 190 363 363 GLY GLY A . n D 4 191 ARG 191 364 364 ARG ARG A . n D 4 192 GLY 192 365 365 GLY GLY A . n D 4 193 ASN 193 366 366 ASN ASN A . n D 4 194 HIS 194 367 367 HIS HIS A . n D 4 195 PRO 195 368 368 PRO PRO A . n D 4 196 LYS 196 369 369 LYS LYS A . n D 4 197 MET 197 370 370 MET MET A . n D 4 198 GLY 198 371 371 GLY GLY A . n D 4 199 MET 199 372 372 MET MET A . n D 4 200 LEU 200 373 373 LEU LEU A . n D 4 201 LYS 201 374 374 LYS LYS A . n D 4 202 ARG 202 375 375 ARG ARG A . n D 4 203 ARG 203 376 376 ARG ARG A . n D 4 204 ILE 204 377 377 ILE ILE A . n D 4 205 MET 205 378 378 MET MET A . n D 4 206 PRO 206 379 379 PRO PRO A . n D 4 207 GLU 207 380 380 GLU GLU A . n D 4 208 ASP 208 381 381 ASP ASP A . n D 4 209 ILE 209 382 382 ILE ILE A . n D 4 210 ILE 210 383 383 ILE ILE A . n D 4 211 ILE 211 384 384 ILE ILE A . n D 4 212 ASN 212 385 385 ASN ASN A . n D 4 213 CYS 213 386 386 CYS CYS A . n D 4 214 SER 214 387 387 SER SER A . n D 4 215 LYS 215 388 388 LYS LYS A . n D 4 216 ASP 216 389 389 ASP ASP A . n D 4 217 ALA 217 390 390 ALA ALA A . n D 4 218 LYS 218 391 391 LYS LYS A . n D 4 219 VAL 219 392 392 VAL VAL A . n D 4 220 PRO 220 393 393 PRO PRO A . n D 4 221 SER 221 394 394 SER SER A . n D 4 222 PRO 222 395 395 PRO PRO A . n D 4 223 PRO 223 396 396 PRO PRO A . n D 4 224 PRO 224 397 397 PRO PRO A . n D 4 225 GLY 225 398 398 GLY GLY A . n D 4 226 HIS 226 399 399 HIS HIS A . n D 4 227 LYS 227 400 400 LYS LYS A . n D 4 228 TRP 228 401 401 TRP TRP A . n D 4 229 LYS 229 402 402 LYS LYS A . n D 4 230 GLU 230 403 403 GLU GLU A . n D 4 231 VAL 231 404 404 VAL VAL A . n D 4 232 ARG 232 405 405 ARG ARG A . n D 4 233 HIS 233 406 406 HIS HIS A . n D 4 234 ASP 234 407 407 ASP ASP A . n D 4 235 ASN 235 408 408 ASN ASN A . n D 4 236 LYS 236 409 409 LYS LYS A . n D 4 237 VAL 237 410 410 VAL VAL A . n D 4 238 THR 238 411 411 THR THR A . n D 4 239 TRP 239 412 412 TRP TRP A . n D 4 240 LEU 240 413 413 LEU LEU A . n D 4 241 VAL 241 414 414 VAL VAL A . n D 4 242 SER 242 415 415 SER SER A . n D 4 243 TRP 243 416 416 TRP TRP A . n D 4 244 THR 244 417 417 THR THR A . n D 4 245 GLU 245 418 418 GLU GLU A . n D 4 246 ASN 246 419 419 ASN ASN A . n D 4 247 ILE 247 420 420 ILE ILE A . n D 4 248 GLN 248 421 421 GLN GLN A . n D 4 249 GLY 249 422 422 GLY GLY A . n D 4 250 SER 250 423 423 SER SER A . n D 4 251 ILE 251 424 424 ILE ILE A . n D 4 252 LYS 252 425 425 LYS LYS A . n D 4 253 TYR 253 426 426 TYR TYR A . n D 4 254 ILE 254 427 427 ILE ILE A . n D 4 255 MET 255 428 428 MET MET A . n D 4 256 LEU 256 429 429 LEU LEU A . n D 4 257 ASN 257 430 430 ASN ASN A . n D 4 258 PRO 258 431 431 PRO PRO A . n D 4 259 SER 259 432 432 SER SER A . n D 4 260 SER 260 433 433 SER SER A . n D 4 261 ARG 261 434 434 ARG ARG A . n D 4 262 ILE 262 435 435 ILE ILE A . n D 4 263 LYS 263 436 436 LYS LYS A . n D 4 264 GLY 264 437 437 GLY GLY A . n D 4 265 GLU 265 438 438 GLU GLU A . n D 4 266 LYS 266 439 439 LYS LYS A . n D 4 267 ASP 267 440 440 ASP ASP A . n D 4 268 TRP 268 441 441 TRP TRP A . n D 4 269 GLN 269 442 442 GLN GLN A . n D 4 270 LYS 270 443 443 LYS LYS A . n D 4 271 TYR 271 444 444 TYR TYR A . n D 4 272 GLU 272 445 445 GLU GLU A . n D 4 273 THR 273 446 446 THR THR A . n D 4 274 ALA 274 447 447 ALA ALA A . n D 4 275 ARG 275 448 448 ARG ARG A . n D 4 276 ARG 276 449 449 ARG ARG A . n D 4 277 LEU 277 450 450 LEU LEU A . n D 4 278 LYS 278 451 451 LYS LYS A . n D 4 279 LYS 279 452 452 LYS LYS A . n D 4 280 CYS 280 453 453 CYS CYS A . n D 4 281 VAL 281 454 454 VAL VAL A . n D 4 282 ASP 282 455 455 ASP ASP A . n D 4 283 LYS 283 456 456 LYS LYS A . n D 4 284 ILE 284 457 457 ILE ILE A . n D 4 285 ARG 285 458 458 ARG ARG A . n D 4 286 ASN 286 459 459 ASN ASN A . n D 4 287 GLN 287 460 460 GLN GLN A . n D 4 288 TYR 288 461 461 TYR TYR A . n D 4 289 ARG 289 462 462 ARG ARG A . n D 4 290 GLU 290 463 463 GLU GLU A . n D 4 291 ASP 291 464 464 ASP ASP A . n D 4 292 TRP 292 465 465 TRP TRP A . n D 4 293 LYS 293 466 466 LYS LYS A . n D 4 294 SER 294 467 467 SER SER A . n D 4 295 LYS 295 468 468 LYS LYS A . n D 4 296 GLU 296 469 469 GLU GLU A . n D 4 297 MET 297 470 470 MET MET A . n D 4 298 LYS 298 471 471 LYS LYS A . n D 4 299 VAL 299 472 472 VAL VAL A . n D 4 300 ARG 300 473 473 ARG ARG A . n D 4 301 GLN 301 474 474 GLN GLN A . n D 4 302 ARG 302 475 475 ARG ARG A . n D 4 303 ALA 303 476 476 ALA ALA A . n D 4 304 VAL 304 477 477 VAL VAL A . n D 4 305 ALA 305 478 478 ALA ALA A . n D 4 306 LEU 306 479 479 LEU LEU A . n D 4 307 TYR 307 480 480 TYR TYR A . n D 4 308 PHE 308 481 481 PHE PHE A . n D 4 309 ILE 309 482 482 ILE ILE A . n D 4 310 ASP 310 483 483 ASP ASP A . n D 4 311 LYS 311 484 484 LYS LYS A . n D 4 312 LEU 312 485 485 LEU LEU A . n D 4 313 ALA 313 486 486 ALA ALA A . n D 4 314 LEU 314 487 487 LEU LEU A . n D 4 315 ARG 315 488 488 ARG ARG A . n D 4 316 ALA 316 489 489 ALA ALA A . n D 4 317 GLY 317 490 490 GLY GLY A . n D 4 318 ASN 318 491 491 ASN ASN A . n D 4 319 GLU 319 492 492 GLU GLU A . n D 4 320 LYS 320 493 493 LYS LYS A . n D 4 321 GLU 321 494 494 GLU GLU A . n D 4 322 GLU 322 495 495 GLU GLU A . n D 4 323 GLY 323 496 496 GLY GLY A . n D 4 324 GLU 324 497 497 GLU GLU A . n D 4 325 THR 325 498 498 THR THR A . n D 4 326 ALA 326 499 499 ALA ALA A . n D 4 327 ASP 327 500 500 ASP ASP A . n D 4 328 THR 328 501 501 THR THR A . n D 4 329 VAL 329 502 502 VAL VAL A . n D 4 330 GLY 330 503 503 GLY GLY A . n D 4 331 CYS 331 504 504 CYS CYS A . n D 4 332 CYS 332 505 505 CYS CYS A . n D 4 333 SER 333 506 506 SER SER A . n D 4 334 LEU 334 507 507 LEU LEU A . n D 4 335 ARG 335 508 508 ARG ARG A . n D 4 336 VAL 336 509 509 VAL VAL A . n D 4 337 GLU 337 510 510 GLU GLU A . n D 4 338 HIS 338 511 511 HIS HIS A . n D 4 339 ILE 339 512 512 ILE ILE A . n D 4 340 ASN 340 513 513 ASN ASN A . n D 4 341 LEU 341 514 514 LEU LEU A . n D 4 342 HIS 342 515 515 HIS HIS A . n D 4 343 PRO 343 516 516 PRO PRO A . n D 4 344 GLU 344 517 517 GLU GLU A . n D 4 345 LEU 345 518 518 LEU LEU A . n D 4 346 ASP 346 519 519 ASP ASP A . n D 4 347 GLY 347 520 520 GLY GLY A . n D 4 348 GLN 348 521 521 GLN GLN A . n D 4 349 GLU 349 522 522 GLU GLU A . n D 4 350 TYR 350 523 523 TYR TYR A . n D 4 351 VAL 351 524 524 VAL VAL A . n D 4 352 VAL 352 525 525 VAL VAL A . n D 4 353 GLU 353 526 526 GLU GLU A . n D 4 354 PHE 354 527 527 PHE PHE A . n D 4 355 ASP 355 528 528 ASP ASP A . n D 4 356 PHE 356 529 529 PHE PHE A . n D 4 357 LEU 357 530 530 LEU LEU A . n D 4 358 GLY 358 531 531 GLY GLY A . n D 4 359 LYS 359 532 532 LYS LYS A . n D 4 360 ASP 360 533 533 ASP ASP A . n D 4 361 SER 361 534 534 SER SER A . n D 4 362 ILE 362 535 535 ILE ILE A . n D 4 363 ARG 363 536 536 ARG ARG A . n D 4 364 TYR 364 537 537 TYR TYR A . n D 4 365 TYR 365 538 538 TYR TYR A . n D 4 366 ASN 366 539 539 ASN ASN A . n D 4 367 LYS 367 540 540 LYS LYS A . n D 4 368 VAL 368 541 541 VAL VAL A . n D 4 369 PRO 369 542 542 PRO PRO A . n D 4 370 VAL 370 543 543 VAL VAL A . n D 4 371 GLU 371 544 544 GLU GLU A . n D 4 372 LYS 372 545 545 LYS LYS A . n D 4 373 ARG 373 546 546 ARG ARG A . n D 4 374 VAL 374 547 547 VAL VAL A . n D 4 375 PHE 375 548 548 PHE PHE A . n D 4 376 LYS 376 549 549 LYS LYS A . n D 4 377 ASN 377 550 550 ASN ASN A . n D 4 378 LEU 378 551 551 LEU LEU A . n D 4 379 GLN 379 552 552 GLN GLN A . n D 4 380 LEU 380 553 553 LEU LEU A . n D 4 381 PHE 381 554 554 PHE PHE A . n D 4 382 MET 382 555 555 MET MET A . n D 4 383 GLU 383 556 556 GLU GLU A . n D 4 384 ASN 384 557 557 ASN ASN A . n D 4 385 LYS 385 558 558 LYS LYS A . n D 4 386 GLN 386 559 559 GLN GLN A . n D 4 387 PRO 387 560 560 PRO PRO A . n D 4 388 GLU 388 561 561 GLU GLU A . n D 4 389 ASP 389 562 562 ASP ASP A . n D 4 390 ASP 390 563 563 ASP ASP A . n D 4 391 LEU 391 564 564 LEU LEU A . n D 4 392 PHE 392 565 565 PHE PHE A . n D 4 393 ASP 393 566 566 ASP ASP A . n D 4 394 ARG 394 567 567 ARG ARG A . n D 4 395 LEU 395 568 568 LEU LEU A . n D 4 396 ASN 396 569 569 ASN ASN A . n D 4 397 THR 397 570 570 THR THR A . n D 4 398 GLY 398 571 571 GLY GLY A . n D 4 399 ILE 399 572 572 ILE ILE A . n D 4 400 LEU 400 573 573 LEU LEU A . n D 4 401 ASN 401 574 574 ASN ASN A . n D 4 402 LYS 402 575 575 LYS LYS A . n D 4 403 HIS 403 576 576 HIS HIS A . n D 4 404 LEU 404 577 577 LEU LEU A . n D 4 405 GLN 405 578 578 GLN GLN A . n D 4 406 ASP 406 579 579 ASP ASP A . n D 4 407 LEU 407 580 580 LEU LEU A . n D 4 408 MET 408 581 581 MET MET A . n D 4 409 GLU 409 582 582 GLU GLU A . n D 4 410 GLY 410 583 583 GLY GLY A . n D 4 411 LEU 411 584 584 LEU LEU A . n D 4 412 THR 412 585 585 THR THR A . n D 4 413 ALA 413 586 586 ALA ALA A . n D 4 414 LYS 414 587 587 LYS LYS A . n D 4 415 VAL 415 588 588 VAL VAL A . n D 4 416 PHE 416 589 589 PHE PHE A . n D 4 417 ARG 417 590 590 ARG ARG A . n D 4 418 THR 418 591 591 THR THR A . n D 4 419 TYR 419 592 592 TYR TYR A . n D 4 420 ASN 420 593 593 ASN ASN A . n D 4 421 ALA 421 594 594 ALA ALA A . n D 4 422 SER 422 595 595 SER SER A . n D 4 423 ILE 423 596 596 ILE ILE A . n D 4 424 THR 424 597 597 THR THR A . n D 4 425 LEU 425 598 598 LEU LEU A . n D 4 426 GLN 426 599 599 GLN GLN A . n D 4 427 GLN 427 600 600 GLN GLN A . n D 4 428 GLN 428 601 601 GLN GLN A . n D 4 429 LEU 429 602 602 LEU LEU A . n D 4 430 LYS 430 603 603 LYS LYS A . n D 4 431 GLU 431 604 604 GLU GLU A . n D 4 432 LEU 432 605 605 LEU LEU A . n D 4 433 THR 433 606 606 THR THR A . n D 4 434 ALA 434 607 607 ALA ALA A . n D 4 435 PRO 435 608 608 PRO PRO A . n D 4 436 ASP 436 609 609 ASP ASP A . n D 4 437 GLU 437 610 610 GLU GLU A . n D 4 438 ASN 438 611 611 ASN ASN A . n D 4 439 ILE 439 612 612 ILE ILE A . n D 4 440 PRO 440 613 613 PRO PRO A . n D 4 441 ALA 441 614 614 ALA ALA A . n D 4 442 LYS 442 615 615 LYS LYS A . n D 4 443 ILE 443 616 616 ILE ILE A . n D 4 444 LEU 444 617 617 LEU LEU A . n D 4 445 SER 445 618 618 SER SER A . n D 4 446 TYR 446 619 619 TYR TYR A . n D 4 447 ASN 447 620 620 ASN ASN A . n D 4 448 ARG 448 621 621 ARG ARG A . n D 4 449 ALA 449 622 622 ALA ALA A . n D 4 450 ASN 450 623 623 ASN ASN A . n D 4 451 ARG 451 624 624 ARG ARG A . n D 4 452 ALA 452 625 625 ALA ALA A . n D 4 453 VAL 453 626 626 VAL VAL A . n D 4 454 ALA 454 627 627 ALA ALA A . n D 4 455 ILE 455 628 628 ILE ILE A . n D 4 456 LEU 456 629 629 LEU LEU A . n D 4 457 CYS 457 630 630 CYS CYS A . n D 4 458 ASN 458 631 631 ASN ASN A . n D 4 459 HIS 459 632 632 HIS HIS A . n D 4 460 GLN 460 633 633 GLN GLN A . n D 4 461 ARG 461 634 634 ARG ARG A . n D 4 462 ALA 462 635 635 ALA ALA A . n D 4 463 PRO 463 636 636 PRO PRO A . n D 4 464 PRO 464 637 637 PRO PRO A . n D 4 465 LYS 465 638 638 LYS LYS A . n D 4 466 THR 466 639 639 THR THR A . n D 4 467 PHE 467 640 640 PHE PHE A . n D 4 468 GLU 468 641 641 GLU GLU A . n D 4 469 LYS 469 642 642 LYS LYS A . n D 4 470 SER 470 643 643 SER SER A . n D 4 471 MET 471 644 644 MET MET A . n D 4 472 MET 472 645 645 MET MET A . n D 4 473 ASN 473 646 646 ASN ASN A . n D 4 474 LEU 474 647 647 LEU LEU A . n D 4 475 GLN 475 648 648 GLN GLN A . n D 4 476 THR 476 649 649 THR THR A . n D 4 477 LYS 477 650 650 LYS LYS A . n D 4 478 ILE 478 651 651 ILE ILE A . n D 4 479 ASP 479 652 652 ASP ASP A . n D 4 480 ALA 480 653 653 ALA ALA A . n D 4 481 LYS 481 654 654 LYS LYS A . n D 4 482 LYS 482 655 655 LYS LYS A . n D 4 483 GLU 483 656 656 GLU GLU A . n D 4 484 GLN 484 657 657 GLN GLN A . n D 4 485 LEU 485 658 658 LEU LEU A . n D 4 486 ALA 486 659 659 ALA ALA A . n D 4 487 ASP 487 660 660 ASP ASP A . n D 4 488 ALA 488 661 661 ALA ALA A . n D 4 489 ARG 489 662 662 ARG ARG A . n D 4 490 ARG 490 663 663 ARG ARG A . n D 4 491 ASP 491 664 664 ASP ASP A . n D 4 492 LEU 492 665 665 LEU LEU A . n D 4 493 LYS 493 666 666 LYS LYS A . n D 4 494 SER 494 667 667 SER SER A . n D 4 495 ALA 495 668 668 ALA ALA A . n D 4 496 LYS 496 669 669 LYS LYS A . n D 4 497 ALA 497 670 670 ALA ALA A . n D 4 498 ASP 498 671 671 ASP ASP A . n D 4 499 ALA 499 672 672 ALA ALA A . n D 4 500 LYS 500 673 673 LYS LYS A . n D 4 501 VAL 501 674 674 VAL VAL A . n D 4 502 MET 502 675 675 MET MET A . n D 4 503 LYS 503 676 676 LYS LYS A . n D 4 504 ASP 504 677 677 ASP ASP A . n D 4 505 ALA 505 678 678 ALA ALA A . n D 4 506 LYS 506 679 679 LYS LYS A . n D 4 507 THR 507 680 680 THR THR A . n D 4 508 LYS 508 681 681 LYS LYS A . n D 4 509 LYS 509 682 682 LYS LYS A . n D 4 510 VAL 510 683 683 VAL VAL A . n D 4 511 VAL 511 684 684 VAL VAL A . n D 4 512 GLU 512 685 685 GLU GLU A . n D 4 513 SER 513 686 686 SER SER A . n D 4 514 LYS 514 687 687 LYS LYS A . n D 4 515 LYS 515 688 688 LYS LYS A . n D 4 516 LYS 516 689 689 LYS LYS A . n D 4 517 ALA 517 690 690 ALA ALA A . n D 4 518 VAL 518 691 691 VAL VAL A . n D 4 519 GLN 519 692 692 GLN GLN A . n D 4 520 ARG 520 693 693 ARG ARG A . n D 4 521 LEU 521 694 694 LEU LEU A . n D 4 522 GLU 522 695 695 GLU GLU A . n D 4 523 GLU 523 696 696 GLU GLU A . n D 4 524 GLN 524 697 697 GLN GLN A . n D 4 525 LEU 525 698 698 LEU LEU A . n D 4 526 MET 526 699 699 MET MET A . n D 4 527 LYS 527 700 700 LYS LYS A . n D 4 528 LEU 528 701 701 LEU LEU A . n D 4 529 GLU 529 702 702 GLU GLU A . n D 4 530 VAL 530 703 703 VAL VAL A . n D 4 531 GLN 531 704 704 GLN GLN A . n D 4 532 ALA 532 705 705 ALA ALA A . n D 4 533 THR 533 706 706 THR THR A . n D 4 534 ASP 534 707 707 ASP ASP A . n D 4 535 ARG 535 708 708 ARG ARG A . n D 4 536 GLU 536 709 709 GLU GLU A . n D 4 537 GLU 537 710 710 GLU GLU A . n D 4 538 ASN 538 711 711 ASN ASN A . n D 4 539 LYS 539 712 712 LYS LYS A . n D 4 540 GLN 540 713 713 GLN GLN A . n D 4 541 ILE 541 714 714 ILE ILE A . n D 4 542 ALA 542 715 715 ALA ALA A . n D 4 543 LEU 543 716 716 LEU LEU A . n D 4 544 GLY 544 717 717 GLY GLY A . n D 4 545 THR 545 718 718 THR THR A . n D 4 546 SER 546 719 719 SER SER A . n D 4 547 LYS 547 720 720 LYS LYS A . n D 4 548 LEU 548 721 721 LEU LEU A . n D 4 549 ASN 549 722 722 ASN ASN A . n D 4 550 PTR 550 723 723 PTR PTR A . n D 4 551 LEU 551 724 724 LEU LEU A . n D 4 552 ASP 552 725 725 ASP ASP A . n D 4 553 PRO 553 726 726 PRO PRO A . n D 4 554 ARG 554 727 727 ARG ARG A . n D 4 555 ILE 555 728 728 ILE ILE A . n D 4 556 THR 556 729 729 THR THR A . n D 4 557 VAL 557 730 730 VAL VAL A . n D 4 558 ALA 558 731 731 ALA ALA A . n D 4 559 TRP 559 732 732 TRP TRP A . n D 4 560 CYS 560 733 733 CYS CYS A . n D 4 561 LYS 561 734 734 LYS LYS A . n D 4 562 LYS 562 735 735 LYS LYS A . n D 4 563 TRP 563 736 736 TRP TRP A . n D 4 564 GLY 564 737 737 GLY GLY A . n D 4 565 VAL 565 738 738 VAL VAL A . n D 4 566 PRO 566 739 739 PRO PRO A . n D 4 567 ILE 567 740 740 ILE ILE A . n D 4 568 GLU 568 741 741 GLU GLU A . n D 4 569 LYS 569 742 742 LYS LYS A . n D 4 570 ILE 570 743 743 ILE ILE A . n D 4 571 TYR 571 744 744 TYR TYR A . n D 4 572 ASN 572 745 745 ASN ASN A . n D 4 573 LYS 573 746 746 LYS LYS A . n D 4 574 THR 574 747 747 THR THR A . n D 4 575 GLN 575 748 748 GLN GLN A . n D 4 576 ARG 576 749 749 ARG ARG A . n D 4 577 GLU 577 750 750 GLU GLU A . n D 4 578 LYS 578 751 751 LYS LYS A . n D 4 579 PHE 579 752 752 PHE PHE A . n D 4 580 ALA 580 753 753 ALA ALA A . n D 4 581 TRP 581 754 754 TRP TRP A . n D 4 582 ALA 582 755 755 ALA ALA A . n D 4 583 ILE 583 756 756 ILE ILE A . n D 4 584 ASP 584 757 757 ASP ASP A . n D 4 585 MET 585 758 758 MET MET A . n D 4 586 ALA 586 759 759 ALA ALA A . n D 4 587 ASP 587 760 760 ASP ASP A . n D 4 588 GLU 588 761 761 GLU GLU A . n D 4 589 ASP 589 762 762 ASP ASP A . n D 4 590 TYR 590 763 763 TYR TYR A . n D 4 591 GLU 591 764 764 GLU GLU A . n D 4 592 PHE 592 765 765 PHE PHE A . n # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id EHD _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 990 _pdbx_nonpoly_scheme.auth_seq_num 990 _pdbx_nonpoly_scheme.pdb_mon_id EHD _pdbx_nonpoly_scheme.auth_mon_id EHD _pdbx_nonpoly_scheme.pdb_strand_id D _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 201 ? CG ? D GLN 28 CG 2 1 Y 1 A GLN 201 ? CD ? D GLN 28 CD 3 1 Y 1 A GLN 201 ? OE1 ? D GLN 28 OE1 4 1 Y 1 A GLN 201 ? NE2 ? D GLN 28 NE2 5 1 Y 1 A LYS 202 ? CG ? D LYS 29 CG 6 1 Y 1 A LYS 202 ? CD ? D LYS 29 CD 7 1 Y 1 A LYS 202 ? CE ? D LYS 29 CE 8 1 Y 1 A LYS 202 ? NZ ? D LYS 29 NZ 9 1 Y 1 A THR 639 ? OG1 ? D THR 466 OG1 10 1 Y 1 A THR 639 ? CG2 ? D THR 466 CG2 11 1 Y 1 A PHE 640 ? CG ? D PHE 467 CG 12 1 Y 1 A PHE 640 ? CD1 ? D PHE 467 CD1 13 1 Y 1 A PHE 640 ? CD2 ? D PHE 467 CD2 14 1 Y 1 A PHE 640 ? CE1 ? D PHE 467 CE1 15 1 Y 1 A PHE 640 ? CE2 ? D PHE 467 CE2 16 1 Y 1 A PHE 640 ? CZ ? D PHE 467 CZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 MAR345 'data collection' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1T8I _cell.length_a 57.363 _cell.length_b 114.423 _cell.length_c 74.118 _cell.angle_alpha 90.00 _cell.angle_beta 93.49 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1T8I _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1T8I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_percent_sol 57.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pdbx_details 'PEG 8000, ammonium sulfate, MES, pH 6.4, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'ammonium sulfate' ? ? ? 1 3 1 MES ? ? ? 1 4 2 'ammonium sulfate' ? ? ? 1 5 2 MES ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 32-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 32-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1T8I _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3 _reflns.d_resolution_low 20 _reflns.number_all 16492 _reflns.number_obs 16492 _reflns.percent_possible_obs 91 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.08 _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.16 _reflns_shell.percent_possible_all 47 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.427 _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1427 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1T8I _refine.ls_number_reflns_obs 16492 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 90.91 _refine.ls_R_factor_obs 0.24356 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2409 _refine.ls_R_factor_R_free 0.29154 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.913 _refine.correlation_coeff_Fo_to_Fc_free 0.862 _refine.B_iso_mean 72.185 _refine.aniso_B[1][1] -2.10 _refine.aniso_B[2][2] -3.25 _refine.aniso_B[3][3] 5.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 3.41 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1K4T _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.536 _refine.overall_SU_ML 0.456 _refine.overall_SU_B 24.369 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4687 _refine_hist.pdbx_number_atoms_nucleic_acid 892 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5605 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 5818 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.859 2.161 ? 8007 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.449 3.000 ? 564 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 22.299 15.000 ? 996 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.101 0.200 ? 800 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 4044 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.329 0.300 ? 3758 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.246 0.500 ? 445 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.234 0.300 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.744 1.500 ? 2830 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.410 2.000 ? 4574 'X-RAY DIFFRACTION' ? r_scbond_it 1.830 3.000 ? 2988 'X-RAY DIFFRACTION' ? r_scangle_it 3.426 4.500 ? 3433 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.158 _refine_ls_shell.number_reflns_R_work 1427 _refine_ls_shell.R_factor_R_work 0.375 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.449 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1T8I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1T8I _struct.title 'Human DNA Topoisomerase I (70 Kda) In Complex With The Poison Camptothecin and Covalent Complex With A 22 Base Pair DNA Duplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T8I _struct_keywords.pdbx_keywords ISOMERASE/DNA _struct_keywords.text 'COMPLEX (ISOMERASE-DNA), DNA, TOPOISOMERASE I, DRUG, POISON, ISOMERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TOP1_HUMAN P11387 4 ;KKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKA EEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEK LLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWL VSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEK EEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGIL NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDA KKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWC KKWGVPIEKIYNKTQREKFAWAIDMADEDYEF ; 174 ? 2 PDB 1T8I 1T8I 1 ? ? ? 3 PDB 1T8I 1T8I 2 ? ? ? 4 PDB 1T8I 1T8I 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1T8I A 1 ? 592 ? P11387 174 ? 765 ? 174 765 2 2 1T8I B 1 ? 10 ? 1T8I 1 ? 10 ? 1 10 3 3 1T8I C 1 ? 12 ? 1T8I 11 ? 22 ? 11 22 4 4 1T8I D 1 ? 22 ? 1T8I 101 ? 122 ? 101 122 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1T8I _struct_ref_seq_dif.mon_id PTR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 550 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P11387 _struct_ref_seq_dif.db_mon_id TYR _struct_ref_seq_dif.pdbx_seq_db_seq_num 723 _struct_ref_seq_dif.details 'modified residue' _struct_ref_seq_dif.pdbx_auth_seq_num 723 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS D 31 ? GLU D 35 ? LYS A 204 GLU A 208 5 ? 5 HELX_P HELX_P2 2 SER D 77 ? LYS D 89 ? SER A 250 LYS A 262 1 ? 13 HELX_P HELX_P3 3 HIS D 93 ? THR D 97 ? HIS A 266 THR A 270 5 ? 5 HELX_P HELX_P4 4 LYS D 98 ? GLU D 112 ? LYS A 271 GLU A 285 1 ? 15 HELX_P HELX_P5 5 THR D 114 ? ASN D 119 ? THR A 287 ASN A 292 1 ? 6 HELX_P HELX_P6 6 ASN D 123 ? SER D 125 ? ASN A 296 SER A 298 5 ? 3 HELX_P HELX_P7 7 PHE D 129 ? LYS D 144 ? PHE A 302 LYS A 317 1 ? 16 HELX_P HELX_P8 8 GLU D 149 ? ASN D 158 ? GLU A 322 ASN A 331 1 ? 10 HELX_P HELX_P9 9 ASN D 158 ? GLY D 166 ? ASN A 331 GLY A 339 1 ? 9 HELX_P HELX_P10 10 MET D 205 ? ASP D 208 ? MET A 378 ASP A 381 5 ? 4 HELX_P HELX_P11 11 SER D 260 ? LYS D 279 ? SER A 433 LYS A 452 1 ? 20 HELX_P HELX_P12 12 CYS D 280 ? ASP D 291 ? CYS A 453 ASP A 464 1 ? 12 HELX_P HELX_P13 13 TRP D 292 ? SER D 294 ? TRP A 465 SER A 467 5 ? 3 HELX_P HELX_P14 14 GLU D 296 ? LYS D 311 ? GLU A 469 LYS A 484 1 ? 16 HELX_P HELX_P15 15 GLY D 330 ? LEU D 334 ? GLY A 503 LEU A 507 5 ? 5 HELX_P HELX_P16 16 ARG D 335 ? GLU D 337 ? ARG A 508 GLU A 510 5 ? 3 HELX_P HELX_P17 17 LYS D 359 ? SER D 361 ? LYS A 532 SER A 534 5 ? 3 HELX_P HELX_P18 18 GLU D 371 ? GLU D 383 ? GLU A 544 GLU A 556 1 ? 13 HELX_P HELX_P19 19 ASN D 396 ? MET D 408 ? ASN A 569 MET A 581 1 ? 13 HELX_P HELX_P20 20 LYS D 414 ? GLU D 431 ? LYS A 587 GLU A 604 1 ? 18 HELX_P HELX_P21 21 ASN D 438 ? CYS D 457 ? ASN A 611 CYS A 630 1 ? 20 HELX_P HELX_P22 22 MET D 471 ? LYS D 500 ? MET A 644 LYS A 673 1 ? 30 HELX_P HELX_P23 23 THR D 507 ? LYS D 514 ? THR A 680 LYS A 687 1 ? 8 HELX_P HELX_P24 24 LYS D 515 ? ASN D 538 ? LYS A 688 ASN A 711 1 ? 24 HELX_P HELX_P25 25 LEU D 543 ? PTR D 550 ? LEU A 716 PTR A 723 1 ? 8 HELX_P HELX_P26 26 ASP D 552 ? TRP D 563 ? ASP A 725 TRP A 736 1 ? 12 HELX_P HELX_P27 27 PRO D 566 ? ILE D 570 ? PRO A 739 ILE A 743 5 ? 5 HELX_P HELX_P28 28 ASN D 572 ? PHE D 579 ? ASN A 745 PHE A 752 1 ? 8 HELX_P HELX_P29 29 PHE D 579 ? MET D 585 ? PHE A 752 MET A 758 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A DT 10 "C3'" ? ? ? 1_555 D PTR 550 O3P ? ? B DT 10 A PTR 723 1_555 ? ? ? ? ? ? ? 1.425 ? ? covale2 covale both ? B TGP 1 "O3'" ? ? ? 1_555 B DG 2 P ? ? C TGP 11 C DG 12 1_555 ? ? ? ? ? ? ? 1.621 ? ? covale3 covale both ? D ASN 549 C ? ? ? 1_555 D PTR 550 N ? ? A ASN 722 A PTR 723 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? D PTR 550 C ? ? ? 1_555 D LEU 551 N ? ? A PTR 723 A LEU 724 1_555 ? ? ? ? ? ? ? 1.327 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 C DT 22 N3 ? ? B DA 1 D DT 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 C DT 22 O4 ? ? B DA 1 D DT 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 C DT 21 N3 ? ? B DA 2 D DT 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 C DT 21 O4 ? ? B DA 2 D DT 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N1 ? ? ? 1_555 C DT 20 N3 ? ? B DA 3 D DT 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N6 ? ? ? 1_555 C DT 20 O4 ? ? B DA 3 D DT 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 19 N3 ? ? B DA 4 D DT 119 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 C DT 18 N3 ? ? B DA 5 D DT 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 C DT 18 O4 ? ? B DA 5 D DT 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 6 N1 ? ? ? 1_555 C DC 17 N3 ? ? B DG 6 D DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 N2 ? ? ? 1_555 C DC 17 O2 ? ? B DG 6 D DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 C DC 17 N4 ? ? B DG 6 D DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 C DT 16 N3 ? ? B DA 7 D DT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 C DT 16 O4 ? ? B DA 7 D DT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 C DG 15 N1 ? ? B DC 8 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 C DG 15 O6 ? ? B DC 8 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 C DG 15 N2 ? ? B DC 8 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 C DA 14 N1 ? ? B DT 9 D DA 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 C DA 14 N6 ? ? B DT 9 D DA 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 C DA 13 N1 ? ? B DT 10 D DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 C DA 13 N6 ? ? B DT 10 D DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B TGP 1 N1 ? ? ? 1_555 C DC 12 N3 ? ? C TGP 11 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B TGP 1 N2 ? ? ? 1_555 C DC 12 O2 ? ? C TGP 11 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B TGP 1 O6 ? ? ? 1_555 C DC 12 N4 ? ? C TGP 11 D DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? C DG 12 D DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? C DG 12 D DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? C DG 12 D DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 13 D DT 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 13 D DT 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 9 N3 ? ? C DA 14 D DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 9 O4 ? ? C DA 14 D DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 8 N3 ? ? C DA 15 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 8 O4 ? ? C DA 15 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 7 N3 ? ? C DA 16 D DT 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 7 O4 ? ? C DA 16 D DT 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 17 D DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 17 D DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 5 N1 ? ? C DT 18 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 5 N6 ? ? C DT 18 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 19 D DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 19 D DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 3 N1 ? ? C DT 20 D DA 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 3 N6 ? ? C DT 20 D DA 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 1 N6 ? ? C DT 21 D DA 101 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 PTR D 550 ? . . . . PTR A 723 ? 1_555 . . . . . . . TYR 1 PTR Phosphorylation 'Named protein modification' 2 DT A 10 ? PTR D 550 ? DT B 10 ? 1_555 PTR A 723 ? 1_555 "C3'" O3P PTR 1 DT None 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU D 47 ? GLU D 48 ? LEU A 220 GLU A 221 A 2 PHE D 167 ? MET D 170 ? PHE A 340 MET A 343 A 3 HIS D 173 ? ARG D 176 ? HIS A 346 ARG A 349 B 1 LYS D 72 ? MET D 74 ? LYS A 245 MET A 247 B 2 PHE D 67 ? TYR D 69 ? PHE A 240 TYR A 242 B 3 CYS D 127 ? ASP D 128 ? CYS A 300 ASP A 301 C 1 GLU D 230 ? ARG D 232 ? GLU A 403 ARG A 405 C 2 ILE D 210 ? ASN D 212 ? ILE A 383 ASN A 385 C 3 VAL D 241 ? THR D 244 ? VAL A 414 THR A 417 C 4 ILE D 251 ? ILE D 254 ? ILE A 424 ILE A 427 D 1 ILE D 339 ? LEU D 345 ? ILE A 512 LEU A 518 D 2 GLN D 348 ? LEU D 357 ? GLN A 521 LEU A 530 D 3 ARG D 363 ? PRO D 369 ? ARG A 536 PRO A 542 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU D 48 ? N GLU A 221 O ILE D 169 ? O ILE A 342 A 2 3 N CYS D 168 ? N CYS A 341 O GLU D 175 ? O GLU A 348 B 1 2 O MET D 74 ? O MET A 247 N PHE D 67 ? N PHE A 240 B 2 3 N TYR D 68 ? N TYR A 241 O ASP D 128 ? O ASP A 301 C 1 2 O ARG D 232 ? O ARG A 405 N ILE D 211 ? N ILE A 384 C 2 3 N ILE D 210 ? N ILE A 383 O SER D 242 ? O SER A 415 C 3 4 N TRP D 243 ? N TRP A 416 O LYS D 252 ? O LYS A 425 D 1 2 N PRO D 343 ? N PRO A 516 O TYR D 350 ? O TYR A 523 D 2 3 N PHE D 354 ? N PHE A 527 O ASN D 366 ? O ASN A 539 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software D EHD 990 ? 9 'BINDING SITE FOR RESIDUE EHD D 990' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG D 191 ? ARG A 364 . ? 1_555 ? 2 AC1 9 ASP D 360 ? ASP A 533 . ? 1_555 ? 3 AC1 9 THR D 545 ? THR A 718 . ? 1_555 ? 4 AC1 9 ASN D 549 ? ASN A 722 . ? 1_555 ? 5 AC1 9 DT A 10 ? DT B 10 . ? 1_555 ? 6 AC1 9 TGP B 1 ? TGP C 11 . ? 1_555 ? 7 AC1 9 DG B 2 ? DG C 12 . ? 1_555 ? 8 AC1 9 DC C 12 ? DC D 112 . ? 1_555 ? 9 AC1 9 DA C 13 ? DA D 113 . ? 1_555 ? # _pdbx_entry_details.entry_id 1T8I _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 335 ? ? CB A LEU 335 ? ? CG A LEU 335 ? ? 129.19 115.30 13.89 2.30 N 2 1 C A HIS 367 ? ? N A PRO 368 ? ? CA A PRO 368 ? ? 129.48 119.30 10.18 1.50 Y 3 1 CA A LEU 487 ? ? CB A LEU 487 ? ? CG A LEU 487 ? ? 129.93 115.30 14.63 2.30 N 4 1 CA A LEU 617 ? ? CB A LEU 617 ? ? CG A LEU 617 ? ? 132.56 115.30 17.26 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 202 ? ? 66.44 107.51 2 1 GLU A 213 ? ? -38.46 130.44 3 1 ASP A 243 ? ? 56.51 18.84 4 1 LYS A 321 ? ? -73.78 26.06 5 1 ASP A 344 ? ? 28.26 96.96 6 1 ASN A 345 ? ? 59.45 0.07 7 1 ARG A 362 ? ? -122.76 -50.85 8 1 PRO A 397 ? ? -34.61 125.05 9 1 CYS A 453 ? ? -146.40 38.69 10 1 ASP A 483 ? ? -73.23 -84.50 11 1 ALA A 486 ? ? 38.78 41.04 12 1 ASP A 519 ? ? 48.89 12.32 13 1 ASN A 557 ? ? 46.93 29.18 14 1 ARG A 567 ? ? 83.14 13.58 15 1 TYR A 592 ? ? -61.85 -70.70 16 1 LEU A 605 ? ? -132.46 -43.82 17 1 GLU A 610 ? ? -38.50 137.86 18 1 LYS A 638 ? ? -17.51 73.30 19 1 THR A 639 ? ? 58.80 -3.49 20 1 GLU A 641 ? ? -84.02 33.59 21 1 MET A 675 ? ? 72.73 68.59 22 1 ASP A 725 ? ? -57.34 108.30 23 1 PRO A 739 ? ? -56.59 109.66 24 1 ILE A 740 ? ? -25.81 -39.81 25 1 MET A 758 ? ? -98.23 42.07 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC B 8 ? ? 0.067 'SIDE CHAIN' 2 1 DT B 9 ? ? 0.069 'SIDE CHAIN' 3 1 DC D 112 ? ? 0.110 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B TGP 1 C TGP 11 ? DG ? 2 D PTR 550 A PTR 723 ? TYR O-PHOSPHOTYROSINE # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # _pdbx_database_remark.id 600 _pdbx_database_remark.text ;HETEROGEN Atom O3* of thymine 10, chain B is missing due to the covalent bond formed between thymine 10 and phosphotyrosine (PTR) 723 ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 174 ? D LYS 1 2 1 Y 1 A LYS 175 ? D LYS 2 3 1 Y 1 A PRO 176 ? D PRO 3 4 1 Y 1 A LYS 177 ? D LYS 4 5 1 Y 1 A ASN 178 ? D ASN 5 6 1 Y 1 A LYS 179 ? D LYS 6 7 1 Y 1 A ASP 180 ? D ASP 7 8 1 Y 1 A LYS 181 ? D LYS 8 9 1 Y 1 A ASP 182 ? D ASP 9 10 1 Y 1 A LYS 183 ? D LYS 10 11 1 Y 1 A LYS 184 ? D LYS 11 12 1 Y 1 A VAL 185 ? D VAL 12 13 1 Y 1 A PRO 186 ? D PRO 13 14 1 Y 1 A GLU 187 ? D GLU 14 15 1 Y 1 A PRO 188 ? D PRO 15 16 1 Y 1 A ASP 189 ? D ASP 16 17 1 Y 1 A ASN 190 ? D ASN 17 18 1 Y 1 A LYS 191 ? D LYS 18 19 1 Y 1 A LYS 192 ? D LYS 19 20 1 Y 1 A LYS 193 ? D LYS 20 21 1 Y 1 A LYS 194 ? D LYS 21 22 1 Y 1 A PRO 195 ? D PRO 22 23 1 Y 1 A LYS 196 ? D LYS 23 24 1 Y 1 A LYS 197 ? D LYS 24 25 1 Y 1 A GLU 198 ? D GLU 25 26 1 Y 1 A GLU 199 ? D GLU 26 27 1 Y 1 A GLU 200 ? D GLU 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EHD O18 O N N 231 EHD C14 C Y N 232 EHD C15 C Y N 233 EHD C19 C N N 234 EHD O22 O N N 235 EHD C20 C N N 236 EHD O23 O N N 237 EHD C16 C Y N 238 EHD C17 C Y N 239 EHD C21 C N S 240 EHD O24 O N N 241 EHD C25 C N N 242 EHD C31 C N N 243 EHD N12 N Y N 244 EHD C11 C N N 245 EHD C8 C Y N 246 EHD C7 C Y N 247 EHD C6 C Y N 248 EHD C5 C Y N 249 EHD N10 N Y N 250 EHD C9 C Y N 251 EHD C13 C Y N 252 EHD C1 C Y N 253 EHD C2 C Y N 254 EHD C3 C Y N 255 EHD C4 C Y N 256 EHD H191 H N N 257 EHD H192 H N N 258 EHD H17 H N N 259 EHD H24 H N N 260 EHD H251 H N N 261 EHD H252 H N N 262 EHD H311 H N N 263 EHD H312 H N N 264 EHD H313 H N N 265 EHD H111 H N N 266 EHD H112 H N N 267 EHD H7 H N N 268 EHD H1 H N N 269 EHD H2 H N N 270 EHD H3 H N N 271 EHD H4 H N N 272 GLN N N N N 273 GLN CA C N S 274 GLN C C N N 275 GLN O O N N 276 GLN CB C N N 277 GLN CG C N N 278 GLN CD C N N 279 GLN OE1 O N N 280 GLN NE2 N N N 281 GLN OXT O N N 282 GLN H H N N 283 GLN H2 H N N 284 GLN HA H N N 285 GLN HB2 H N N 286 GLN HB3 H N N 287 GLN HG2 H N N 288 GLN HG3 H N N 289 GLN HE21 H N N 290 GLN HE22 H N N 291 GLN HXT H N N 292 GLU N N N N 293 GLU CA C N S 294 GLU C C N N 295 GLU O O N N 296 GLU CB C N N 297 GLU CG C N N 298 GLU CD C N N 299 GLU OE1 O N N 300 GLU OE2 O N N 301 GLU OXT O N N 302 GLU H H N N 303 GLU H2 H N N 304 GLU HA H N N 305 GLU HB2 H N N 306 GLU HB3 H N N 307 GLU HG2 H N N 308 GLU HG3 H N N 309 GLU HE2 H N N 310 GLU HXT H N N 311 GLY N N N N 312 GLY CA C N N 313 GLY C C N N 314 GLY O O N N 315 GLY OXT O N N 316 GLY H H N N 317 GLY H2 H N N 318 GLY HA2 H N N 319 GLY HA3 H N N 320 GLY HXT H N N 321 HIS N N N N 322 HIS CA C N S 323 HIS C C N N 324 HIS O O N N 325 HIS CB C N N 326 HIS CG C Y N 327 HIS ND1 N Y N 328 HIS CD2 C Y N 329 HIS CE1 C Y N 330 HIS NE2 N Y N 331 HIS OXT O N N 332 HIS H H N N 333 HIS H2 H N N 334 HIS HA H N N 335 HIS HB2 H N N 336 HIS HB3 H N N 337 HIS HD1 H N N 338 HIS HD2 H N N 339 HIS HE1 H N N 340 HIS HE2 H N N 341 HIS HXT H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 PTR N N N N 472 PTR CA C N S 473 PTR C C N N 474 PTR O O N N 475 PTR OXT O N N 476 PTR CB C N N 477 PTR CG C Y N 478 PTR CD1 C Y N 479 PTR CD2 C Y N 480 PTR CE1 C Y N 481 PTR CE2 C Y N 482 PTR CZ C Y N 483 PTR OH O N N 484 PTR P P N N 485 PTR O1P O N N 486 PTR O2P O N N 487 PTR O3P O N N 488 PTR H H N N 489 PTR H2 H N N 490 PTR HA H N N 491 PTR HXT H N N 492 PTR HB2 H N N 493 PTR HB3 H N N 494 PTR HD1 H N N 495 PTR HD2 H N N 496 PTR HE1 H N N 497 PTR HE2 H N N 498 PTR HO2P H N N 499 PTR HO3P H N N 500 SER N N N N 501 SER CA C N S 502 SER C C N N 503 SER O O N N 504 SER CB C N N 505 SER OG O N N 506 SER OXT O N N 507 SER H H N N 508 SER H2 H N N 509 SER HA H N N 510 SER HB2 H N N 511 SER HB3 H N N 512 SER HG H N N 513 SER HXT H N N 514 TGP "S5'" S N N 515 TGP N9 N Y N 516 TGP C4 C Y N 517 TGP N3 N N N 518 TGP C2 C N N 519 TGP N2 N N N 520 TGP N1 N N N 521 TGP C6 C N N 522 TGP O6 O N N 523 TGP C5 C Y N 524 TGP N7 N Y N 525 TGP C8 C Y N 526 TGP "C2'" C N N 527 TGP "C5'" C N N 528 TGP "C4'" C N S 529 TGP "O4'" O N N 530 TGP "C1'" C N R 531 TGP "C3'" C N S 532 TGP "O3'" O N N 533 TGP OP3 O N N 534 TGP P P N N 535 TGP OP1 O N N 536 TGP OP2 O N N 537 TGP H21 H N N 538 TGP H22 H N N 539 TGP H1 H N N 540 TGP H8 H N N 541 TGP "H2'" H N N 542 TGP "H2''" H N N 543 TGP "H5'" H N N 544 TGP "H5''" H N N 545 TGP "H4'" H N N 546 TGP "H1'" H N N 547 TGP "H3'" H N N 548 TGP "HO3'" H N N 549 TGP HOP3 H N N 550 TGP HOP2 H N N 551 THR N N N N 552 THR CA C N S 553 THR C C N N 554 THR O O N N 555 THR CB C N R 556 THR OG1 O N N 557 THR CG2 C N N 558 THR OXT O N N 559 THR H H N N 560 THR H2 H N N 561 THR HA H N N 562 THR HB H N N 563 THR HG1 H N N 564 THR HG21 H N N 565 THR HG22 H N N 566 THR HG23 H N N 567 THR HXT H N N 568 TRP N N N N 569 TRP CA C N S 570 TRP C C N N 571 TRP O O N N 572 TRP CB C N N 573 TRP CG C Y N 574 TRP CD1 C Y N 575 TRP CD2 C Y N 576 TRP NE1 N Y N 577 TRP CE2 C Y N 578 TRP CE3 C Y N 579 TRP CZ2 C Y N 580 TRP CZ3 C Y N 581 TRP CH2 C Y N 582 TRP OXT O N N 583 TRP H H N N 584 TRP H2 H N N 585 TRP HA H N N 586 TRP HB2 H N N 587 TRP HB3 H N N 588 TRP HD1 H N N 589 TRP HE1 H N N 590 TRP HE3 H N N 591 TRP HZ2 H N N 592 TRP HZ3 H N N 593 TRP HH2 H N N 594 TRP HXT H N N 595 TYR N N N N 596 TYR CA C N S 597 TYR C C N N 598 TYR O O N N 599 TYR CB C N N 600 TYR CG C Y N 601 TYR CD1 C Y N 602 TYR CD2 C Y N 603 TYR CE1 C Y N 604 TYR CE2 C Y N 605 TYR CZ C Y N 606 TYR OH O N N 607 TYR OXT O N N 608 TYR H H N N 609 TYR H2 H N N 610 TYR HA H N N 611 TYR HB2 H N N 612 TYR HB3 H N N 613 TYR HD1 H N N 614 TYR HD2 H N N 615 TYR HE1 H N N 616 TYR HE2 H N N 617 TYR HH H N N 618 TYR HXT H N N 619 VAL N N N N 620 VAL CA C N S 621 VAL C C N N 622 VAL O O N N 623 VAL CB C N N 624 VAL CG1 C N N 625 VAL CG2 C N N 626 VAL OXT O N N 627 VAL H H N N 628 VAL H2 H N N 629 VAL HA H N N 630 VAL HB H N N 631 VAL HG11 H N N 632 VAL HG12 H N N 633 VAL HG13 H N N 634 VAL HG21 H N N 635 VAL HG22 H N N 636 VAL HG23 H N N 637 VAL HXT H N N 638 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EHD O18 C14 doub N N 232 EHD C14 C15 sing Y N 233 EHD C14 N12 sing Y N 234 EHD C15 C19 sing N N 235 EHD C15 C16 doub Y N 236 EHD C19 O22 sing N N 237 EHD C19 H191 sing N N 238 EHD C19 H192 sing N N 239 EHD O22 C20 sing N N 240 EHD C20 O23 doub N N 241 EHD C20 C21 sing N N 242 EHD C16 C17 sing Y N 243 EHD C16 C21 sing N N 244 EHD C17 C13 doub Y N 245 EHD C17 H17 sing N N 246 EHD C21 O24 sing N N 247 EHD C21 C25 sing N N 248 EHD O24 H24 sing N N 249 EHD C25 C31 sing N N 250 EHD C25 H251 sing N N 251 EHD C25 H252 sing N N 252 EHD C31 H311 sing N N 253 EHD C31 H312 sing N N 254 EHD C31 H313 sing N N 255 EHD N12 C11 sing N N 256 EHD N12 C13 sing Y N 257 EHD C11 C8 sing N N 258 EHD C11 H111 sing N N 259 EHD C11 H112 sing N N 260 EHD C8 C7 doub Y N 261 EHD C8 C9 sing Y N 262 EHD C7 C6 sing Y N 263 EHD C7 H7 sing N N 264 EHD C6 C5 sing Y N 265 EHD C6 C1 doub Y N 266 EHD C5 N10 sing Y N 267 EHD C5 C4 doub Y N 268 EHD N10 C9 doub Y N 269 EHD C9 C13 sing Y N 270 EHD C1 C2 sing Y N 271 EHD C1 H1 sing N N 272 EHD C2 C3 doub Y N 273 EHD C2 H2 sing N N 274 EHD C3 C4 sing Y N 275 EHD C3 H3 sing N N 276 EHD C4 H4 sing N N 277 GLN N CA sing N N 278 GLN N H sing N N 279 GLN N H2 sing N N 280 GLN CA C sing N N 281 GLN CA CB sing N N 282 GLN CA HA sing N N 283 GLN C O doub N N 284 GLN C OXT sing N N 285 GLN CB CG sing N N 286 GLN CB HB2 sing N N 287 GLN CB HB3 sing N N 288 GLN CG CD sing N N 289 GLN CG HG2 sing N N 290 GLN CG HG3 sing N N 291 GLN CD OE1 doub N N 292 GLN CD NE2 sing N N 293 GLN NE2 HE21 sing N N 294 GLN NE2 HE22 sing N N 295 GLN OXT HXT sing N N 296 GLU N CA sing N N 297 GLU N H sing N N 298 GLU N H2 sing N N 299 GLU CA C sing N N 300 GLU CA CB sing N N 301 GLU CA HA sing N N 302 GLU C O doub N N 303 GLU C OXT sing N N 304 GLU CB CG sing N N 305 GLU CB HB2 sing N N 306 GLU CB HB3 sing N N 307 GLU CG CD sing N N 308 GLU CG HG2 sing N N 309 GLU CG HG3 sing N N 310 GLU CD OE1 doub N N 311 GLU CD OE2 sing N N 312 GLU OE2 HE2 sing N N 313 GLU OXT HXT sing N N 314 GLY N CA sing N N 315 GLY N H sing N N 316 GLY N H2 sing N N 317 GLY CA C sing N N 318 GLY CA HA2 sing N N 319 GLY CA HA3 sing N N 320 GLY C O doub N N 321 GLY C OXT sing N N 322 GLY OXT HXT sing N N 323 HIS N CA sing N N 324 HIS N H sing N N 325 HIS N H2 sing N N 326 HIS CA C sing N N 327 HIS CA CB sing N N 328 HIS CA HA sing N N 329 HIS C O doub N N 330 HIS C OXT sing N N 331 HIS CB CG sing N N 332 HIS CB HB2 sing N N 333 HIS CB HB3 sing N N 334 HIS CG ND1 sing Y N 335 HIS CG CD2 doub Y N 336 HIS ND1 CE1 doub Y N 337 HIS ND1 HD1 sing N N 338 HIS CD2 NE2 sing Y N 339 HIS CD2 HD2 sing N N 340 HIS CE1 NE2 sing Y N 341 HIS CE1 HE1 sing N N 342 HIS NE2 HE2 sing N N 343 HIS OXT HXT sing N N 344 ILE N CA sing N N 345 ILE N H sing N N 346 ILE N H2 sing N N 347 ILE CA C sing N N 348 ILE CA CB sing N N 349 ILE CA HA sing N N 350 ILE C O doub N N 351 ILE C OXT sing N N 352 ILE CB CG1 sing N N 353 ILE CB CG2 sing N N 354 ILE CB HB sing N N 355 ILE CG1 CD1 sing N N 356 ILE CG1 HG12 sing N N 357 ILE CG1 HG13 sing N N 358 ILE CG2 HG21 sing N N 359 ILE CG2 HG22 sing N N 360 ILE CG2 HG23 sing N N 361 ILE CD1 HD11 sing N N 362 ILE CD1 HD12 sing N N 363 ILE CD1 HD13 sing N N 364 ILE OXT HXT sing N N 365 LEU N CA sing N N 366 LEU N H sing N N 367 LEU N H2 sing N N 368 LEU CA C sing N N 369 LEU CA CB sing N N 370 LEU CA HA sing N N 371 LEU C O doub N N 372 LEU C OXT sing N N 373 LEU CB CG sing N N 374 LEU CB HB2 sing N N 375 LEU CB HB3 sing N N 376 LEU CG CD1 sing N N 377 LEU CG CD2 sing N N 378 LEU CG HG sing N N 379 LEU CD1 HD11 sing N N 380 LEU CD1 HD12 sing N N 381 LEU CD1 HD13 sing N N 382 LEU CD2 HD21 sing N N 383 LEU CD2 HD22 sing N N 384 LEU CD2 HD23 sing N N 385 LEU OXT HXT sing N N 386 LYS N CA sing N N 387 LYS N H sing N N 388 LYS N H2 sing N N 389 LYS CA C sing N N 390 LYS CA CB sing N N 391 LYS CA HA sing N N 392 LYS C O doub N N 393 LYS C OXT sing N N 394 LYS CB CG sing N N 395 LYS CB HB2 sing N N 396 LYS CB HB3 sing N N 397 LYS CG CD sing N N 398 LYS CG HG2 sing N N 399 LYS CG HG3 sing N N 400 LYS CD CE sing N N 401 LYS CD HD2 sing N N 402 LYS CD HD3 sing N N 403 LYS CE NZ sing N N 404 LYS CE HE2 sing N N 405 LYS CE HE3 sing N N 406 LYS NZ HZ1 sing N N 407 LYS NZ HZ2 sing N N 408 LYS NZ HZ3 sing N N 409 LYS OXT HXT sing N N 410 MET N CA sing N N 411 MET N H sing N N 412 MET N H2 sing N N 413 MET CA C sing N N 414 MET CA CB sing N N 415 MET CA HA sing N N 416 MET C O doub N N 417 MET C OXT sing N N 418 MET CB CG sing N N 419 MET CB HB2 sing N N 420 MET CB HB3 sing N N 421 MET CG SD sing N N 422 MET CG HG2 sing N N 423 MET CG HG3 sing N N 424 MET SD CE sing N N 425 MET CE HE1 sing N N 426 MET CE HE2 sing N N 427 MET CE HE3 sing N N 428 MET OXT HXT sing N N 429 PHE N CA sing N N 430 PHE N H sing N N 431 PHE N H2 sing N N 432 PHE CA C sing N N 433 PHE CA CB sing N N 434 PHE CA HA sing N N 435 PHE C O doub N N 436 PHE C OXT sing N N 437 PHE CB CG sing N N 438 PHE CB HB2 sing N N 439 PHE CB HB3 sing N N 440 PHE CG CD1 doub Y N 441 PHE CG CD2 sing Y N 442 PHE CD1 CE1 sing Y N 443 PHE CD1 HD1 sing N N 444 PHE CD2 CE2 doub Y N 445 PHE CD2 HD2 sing N N 446 PHE CE1 CZ doub Y N 447 PHE CE1 HE1 sing N N 448 PHE CE2 CZ sing Y N 449 PHE CE2 HE2 sing N N 450 PHE CZ HZ sing N N 451 PHE OXT HXT sing N N 452 PRO N CA sing N N 453 PRO N CD sing N N 454 PRO N H sing N N 455 PRO CA C sing N N 456 PRO CA CB sing N N 457 PRO CA HA sing N N 458 PRO C O doub N N 459 PRO C OXT sing N N 460 PRO CB CG sing N N 461 PRO CB HB2 sing N N 462 PRO CB HB3 sing N N 463 PRO CG CD sing N N 464 PRO CG HG2 sing N N 465 PRO CG HG3 sing N N 466 PRO CD HD2 sing N N 467 PRO CD HD3 sing N N 468 PRO OXT HXT sing N N 469 PTR N CA sing N N 470 PTR N H sing N N 471 PTR N H2 sing N N 472 PTR CA C sing N N 473 PTR CA CB sing N N 474 PTR CA HA sing N N 475 PTR C O doub N N 476 PTR C OXT sing N N 477 PTR OXT HXT sing N N 478 PTR CB CG sing N N 479 PTR CB HB2 sing N N 480 PTR CB HB3 sing N N 481 PTR CG CD1 doub Y N 482 PTR CG CD2 sing Y N 483 PTR CD1 CE1 sing Y N 484 PTR CD1 HD1 sing N N 485 PTR CD2 CE2 doub Y N 486 PTR CD2 HD2 sing N N 487 PTR CE1 CZ doub Y N 488 PTR CE1 HE1 sing N N 489 PTR CE2 CZ sing Y N 490 PTR CE2 HE2 sing N N 491 PTR CZ OH sing N N 492 PTR OH P sing N N 493 PTR P O1P doub N N 494 PTR P O2P sing N N 495 PTR P O3P sing N N 496 PTR O2P HO2P sing N N 497 PTR O3P HO3P sing N N 498 SER N CA sing N N 499 SER N H sing N N 500 SER N H2 sing N N 501 SER CA C sing N N 502 SER CA CB sing N N 503 SER CA HA sing N N 504 SER C O doub N N 505 SER C OXT sing N N 506 SER CB OG sing N N 507 SER CB HB2 sing N N 508 SER CB HB3 sing N N 509 SER OG HG sing N N 510 SER OXT HXT sing N N 511 TGP "S5'" "C5'" sing N N 512 TGP "S5'" P sing N N 513 TGP N9 C4 sing Y N 514 TGP N9 C8 sing Y N 515 TGP N9 "C1'" sing N N 516 TGP C4 N3 sing N N 517 TGP C4 C5 doub Y N 518 TGP N3 C2 doub N N 519 TGP C2 N2 sing N N 520 TGP C2 N1 sing N N 521 TGP N2 H21 sing N N 522 TGP N2 H22 sing N N 523 TGP N1 C6 sing N N 524 TGP N1 H1 sing N N 525 TGP C6 O6 doub N N 526 TGP C6 C5 sing N N 527 TGP C5 N7 sing Y N 528 TGP N7 C8 doub Y N 529 TGP C8 H8 sing N N 530 TGP "C2'" "C1'" sing N N 531 TGP "C2'" "C3'" sing N N 532 TGP "C2'" "H2'" sing N N 533 TGP "C2'" "H2''" sing N N 534 TGP "C5'" "C4'" sing N N 535 TGP "C5'" "H5'" sing N N 536 TGP "C5'" "H5''" sing N N 537 TGP "C4'" "O4'" sing N N 538 TGP "C4'" "C3'" sing N N 539 TGP "C4'" "H4'" sing N N 540 TGP "O4'" "C1'" sing N N 541 TGP "C1'" "H1'" sing N N 542 TGP "C3'" "O3'" sing N N 543 TGP "C3'" "H3'" sing N N 544 TGP "O3'" "HO3'" sing N N 545 TGP OP3 P sing N N 546 TGP OP3 HOP3 sing N N 547 TGP P OP1 doub N N 548 TGP P OP2 sing N N 549 TGP OP2 HOP2 sing N N 550 THR N CA sing N N 551 THR N H sing N N 552 THR N H2 sing N N 553 THR CA C sing N N 554 THR CA CB sing N N 555 THR CA HA sing N N 556 THR C O doub N N 557 THR C OXT sing N N 558 THR CB OG1 sing N N 559 THR CB CG2 sing N N 560 THR CB HB sing N N 561 THR OG1 HG1 sing N N 562 THR CG2 HG21 sing N N 563 THR CG2 HG22 sing N N 564 THR CG2 HG23 sing N N 565 THR OXT HXT sing N N 566 TRP N CA sing N N 567 TRP N H sing N N 568 TRP N H2 sing N N 569 TRP CA C sing N N 570 TRP CA CB sing N N 571 TRP CA HA sing N N 572 TRP C O doub N N 573 TRP C OXT sing N N 574 TRP CB CG sing N N 575 TRP CB HB2 sing N N 576 TRP CB HB3 sing N N 577 TRP CG CD1 doub Y N 578 TRP CG CD2 sing Y N 579 TRP CD1 NE1 sing Y N 580 TRP CD1 HD1 sing N N 581 TRP CD2 CE2 doub Y N 582 TRP CD2 CE3 sing Y N 583 TRP NE1 CE2 sing Y N 584 TRP NE1 HE1 sing N N 585 TRP CE2 CZ2 sing Y N 586 TRP CE3 CZ3 doub Y N 587 TRP CE3 HE3 sing N N 588 TRP CZ2 CH2 doub Y N 589 TRP CZ2 HZ2 sing N N 590 TRP CZ3 CH2 sing Y N 591 TRP CZ3 HZ3 sing N N 592 TRP CH2 HH2 sing N N 593 TRP OXT HXT sing N N 594 TYR N CA sing N N 595 TYR N H sing N N 596 TYR N H2 sing N N 597 TYR CA C sing N N 598 TYR CA CB sing N N 599 TYR CA HA sing N N 600 TYR C O doub N N 601 TYR C OXT sing N N 602 TYR CB CG sing N N 603 TYR CB HB2 sing N N 604 TYR CB HB3 sing N N 605 TYR CG CD1 doub Y N 606 TYR CG CD2 sing Y N 607 TYR CD1 CE1 sing Y N 608 TYR CD1 HD1 sing N N 609 TYR CD2 CE2 doub Y N 610 TYR CD2 HD2 sing N N 611 TYR CE1 CZ doub Y N 612 TYR CE1 HE1 sing N N 613 TYR CE2 CZ sing Y N 614 TYR CE2 HE2 sing N N 615 TYR CZ OH sing N N 616 TYR OH HH sing N N 617 TYR OXT HXT sing N N 618 VAL N CA sing N N 619 VAL N H sing N N 620 VAL N H2 sing N N 621 VAL CA C sing N N 622 VAL CA CB sing N N 623 VAL CA HA sing N N 624 VAL C O doub N N 625 VAL C OXT sing N N 626 VAL CB CG1 sing N N 627 VAL CB CG2 sing N N 628 VAL CB HB sing N N 629 VAL CG1 HG11 sing N N 630 VAL CG1 HG12 sing N N 631 VAL CG1 HG13 sing N N 632 VAL CG2 HG21 sing N N 633 VAL CG2 HG22 sing N N 634 VAL CG2 HG23 sing N N 635 VAL OXT HXT sing N N 636 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1T8I 'double helix' 1T8I 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 C DT 22 1_555 -1.256 -0.279 -0.056 0.036 -3.877 -7.807 1 B_DA1:DT122_D B 1 ? D 122 ? 20 1 1 A DA 2 1_555 C DT 21 1_555 -0.925 -0.331 0.456 10.477 -9.262 -2.462 2 B_DA2:DT121_D B 2 ? D 121 ? 20 1 1 A DA 3 1_555 C DT 20 1_555 -1.096 -0.523 0.414 -0.773 -15.824 -7.284 3 B_DA3:DT120_D B 3 ? D 120 ? 20 1 1 A DA 4 1_555 C DT 19 1_555 0.298 0.251 0.214 -4.255 -9.776 6.141 4 B_DA4:DT119_D B 4 ? D 119 ? ? ? 1 A DA 5 1_555 C DT 18 1_555 0.584 -0.356 0.214 -3.285 -13.098 7.181 5 B_DA5:DT118_D B 5 ? D 118 ? 20 1 1 A DG 6 1_555 C DC 17 1_555 -0.022 -0.137 -0.621 -14.947 -11.509 4.824 6 B_DG6:DC117_D B 6 ? D 117 ? 19 1 1 A DA 7 1_555 C DT 16 1_555 0.503 -0.418 -0.110 6.462 -2.026 -0.706 7 B_DA7:DT116_D B 7 ? D 116 ? 20 1 1 A DC 8 1_555 C DG 15 1_555 -0.397 -0.279 0.476 -2.566 -2.371 -7.017 8 B_DC8:DG115_D B 8 ? D 115 ? 19 1 1 A DT 9 1_555 C DA 14 1_555 -0.312 0.104 0.165 -6.347 1.505 2.246 9 B_DT9:DA114_D B 9 ? D 114 ? 20 1 1 A DT 10 1_555 C DA 13 1_555 -0.992 -0.508 0.288 -4.185 0.384 4.121 10 B_DT10:DA113_D B 10 ? D 113 ? 20 1 1 B TGP 1 1_555 C DC 12 1_555 -0.883 -0.544 -0.687 -8.741 8.076 -5.142 11 C_TGP11:DC112_D C 11 ? D 112 ? 19 1 1 B DG 2 1_555 C DC 11 1_555 -0.428 -0.098 0.240 8.429 -13.550 2.624 12 C_DG12:DC111_D C 12 ? D 111 ? 19 1 1 B DA 3 1_555 C DT 10 1_555 0.245 -0.046 0.245 2.000 -18.018 -4.740 13 C_DA13:DT110_D C 13 ? D 110 ? 20 1 1 B DA 4 1_555 C DT 9 1_555 0.098 -0.512 -0.300 -1.193 -16.902 6.852 14 C_DA14:DT109_D C 14 ? D 109 ? 20 1 1 B DA 5 1_555 C DT 8 1_555 -0.693 -0.615 0.007 1.099 -16.753 7.130 15 C_DA15:DT108_D C 15 ? D 108 ? 20 1 1 B DA 6 1_555 C DT 7 1_555 0.334 -0.187 -0.058 10.611 -12.930 1.821 16 C_DA16:DT107_D C 16 ? D 107 ? 20 1 1 B DA 7 1_555 C DT 6 1_555 0.947 -0.130 0.370 14.624 -13.696 5.109 17 C_DA17:DT106_D C 17 ? D 106 ? 20 1 1 B DT 8 1_555 C DA 5 1_555 1.038 -0.443 -0.095 6.664 -16.610 -6.247 18 C_DT18:DA105_D C 18 ? D 105 ? 20 1 1 B DT 9 1_555 C DA 4 1_555 -0.067 -0.517 0.010 -3.660 -15.893 0.911 19 C_DT19:DA104_D C 19 ? D 104 ? 20 1 1 B DT 10 1_555 C DA 3 1_555 0.541 -0.203 -0.355 -9.538 -18.971 -3.314 20 C_DT20:DA103_D C 20 ? D 103 ? 20 1 1 B DT 11 1_555 C DA 1 1_555 -0.002 0.891 -1.874 -9.011 -10.052 -31.551 21 C_DT21:DA101_D C 21 ? D 101 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 C DT 22 1_555 A DA 2 1_555 C DT 21 1_555 0.397 -0.325 2.786 -5.157 0.772 34.406 -0.643 -1.326 2.693 1.296 8.656 34.787 1 BB_DA1DA2:DT121DT122_DD B 1 ? D 122 ? B 2 ? D 121 ? 1 A DA 2 1_555 C DT 21 1_555 A DA 3 1_555 C DT 20 1_555 -0.360 -0.079 3.359 -5.023 -6.454 40.192 0.617 -0.053 3.351 -9.276 7.219 40.982 2 BB_DA2DA3:DT120DT121_DD B 2 ? D 121 ? B 3 ? D 120 ? 1 A DA 3 1_555 C DT 20 1_555 A DA 4 1_555 C DT 19 1_555 0.502 -0.235 3.416 4.900 -8.827 43.511 0.549 -0.185 3.432 -11.720 -6.505 44.612 3 BB_DA3DA4:DT119DT120_DD B 3 ? D 120 ? B 4 ? D 119 ? 1 A DA 4 1_555 C DT 19 1_555 A DA 5 1_555 C DT 18 1_555 0.096 -0.651 3.004 0.661 0.883 38.037 -1.102 -0.070 2.990 1.355 -1.013 38.053 4 BB_DA4DA5:DT118DT119_DD B 4 ? D 119 ? B 5 ? D 118 ? 1 A DA 5 1_555 C DT 18 1_555 A DG 6 1_555 C DC 17 1_555 0.321 -0.200 3.575 4.145 -0.606 35.450 -0.230 0.135 3.591 -0.991 -6.778 35.689 5 BB_DA5DG6:DC117DT118_DD B 5 ? D 118 ? B 6 ? D 117 ? 1 A DG 6 1_555 C DC 17 1_555 A DA 7 1_555 C DT 16 1_555 -0.580 -0.034 2.611 -4.701 1.766 33.276 -0.293 0.380 2.661 3.062 8.151 33.642 6 BB_DG6DA7:DT116DC117_DD B 6 ? D 117 ? B 7 ? D 116 ? 1 A DA 7 1_555 C DT 16 1_555 A DC 8 1_555 C DG 15 1_555 0.522 -1.019 3.522 -5.388 0.716 27.999 -2.243 -2.361 3.339 1.462 11.004 28.511 7 BB_DA7DC8:DG115DT116_DD B 7 ? D 116 ? B 8 ? D 115 ? 1 A DC 8 1_555 C DG 15 1_555 A DT 9 1_555 C DA 14 1_555 0.161 -1.065 3.252 4.864 -5.222 39.799 -0.945 0.324 3.356 -7.596 -7.076 40.408 8 BB_DC8DT9:DA114DG115_DD B 8 ? D 115 ? B 9 ? D 114 ? 1 A DT 9 1_555 C DA 14 1_555 A DT 10 1_555 C DA 13 1_555 -0.205 -0.698 3.148 -0.596 -3.512 32.343 -0.648 0.264 3.207 -6.281 1.066 32.534 9 BB_DT9DT10:DA113DA114_DD B 9 ? D 114 ? B 10 ? D 113 ? 1 A DT 10 1_555 C DA 13 1_555 B TGP 1 1_555 C DC 12 1_555 0.895 -2.520 6.640 10.552 7.830 11.130 -17.948 9.840 3.709 29.736 -40.075 17.204 10 BC_DT10TGP11:DC112DA113_DD B 10 ? D 113 ? C 11 ? D 112 ? 1 B TGP 1 1_555 C DC 12 1_555 B DG 2 1_555 C DC 11 1_555 -1.216 1.136 3.074 -3.038 -4.987 30.876 2.969 1.716 2.962 -9.263 5.643 31.410 11 CC_TGP11DG12:DC111DC112_DD C 11 ? D 112 ? C 12 ? D 111 ? 1 B DG 2 1_555 C DC 11 1_555 B DA 3 1_555 C DT 10 1_555 -0.557 0.556 3.316 -3.459 9.879 42.253 -0.245 0.404 3.391 13.458 4.712 43.473 12 CC_DG12DA13:DT110DC111_DD C 12 ? D 111 ? C 13 ? D 110 ? 1 B DA 3 1_555 C DT 10 1_555 B DA 4 1_555 C DT 9 1_555 0.179 0.094 3.274 2.133 -2.008 38.607 0.389 -0.008 3.270 -3.031 -3.220 38.713 13 CC_DA13DA14:DT109DT110_DD C 13 ? D 110 ? C 14 ? D 109 ? 1 B DA 4 1_555 C DT 9 1_555 B DA 5 1_555 C DT 8 1_555 -0.001 0.047 2.984 -5.385 0.181 38.617 0.051 -0.593 2.958 0.271 8.094 38.976 14 CC_DA14DA15:DT108DT109_DD C 14 ? D 109 ? C 15 ? D 108 ? 1 B DA 5 1_555 C DT 8 1_555 B DA 6 1_555 C DT 7 1_555 -0.037 0.167 2.915 1.842 -5.088 36.140 0.890 0.284 2.860 -8.146 -2.949 36.529 15 CC_DA15DA16:DT107DT108_DD C 15 ? D 108 ? C 16 ? D 107 ? 1 B DA 6 1_555 C DT 7 1_555 B DA 7 1_555 C DT 6 1_555 0.412 0.389 3.030 -1.542 3.061 44.599 0.252 -0.672 3.033 4.026 2.028 44.724 16 CC_DA16DA17:DT106DT107_DD C 16 ? D 107 ? C 17 ? D 106 ? 1 B DA 7 1_555 C DT 6 1_555 B DT 8 1_555 C DA 5 1_555 -0.103 -1.405 3.563 2.170 -6.682 33.920 -1.198 0.551 3.750 -11.304 -3.670 34.619 17 CC_DA17DT18:DA105DT106_DD C 17 ? D 106 ? C 18 ? D 105 ? 1 B DT 8 1_555 C DA 5 1_555 B DT 9 1_555 C DA 4 1_555 0.483 0.036 3.391 2.096 0.580 30.081 -0.055 -0.484 3.416 1.117 -4.031 30.158 18 CC_DT18DT19:DA104DA105_DD C 18 ? D 105 ? C 19 ? D 104 ? 1 B DT 9 1_555 C DA 4 1_555 B DT 10 1_555 C DA 3 1_555 -0.953 -0.694 3.304 0.463 0.750 43.467 -1.010 1.332 3.282 1.013 -0.626 43.476 19 CC_DT19DT20:DA103DA104_DD C 19 ? D 104 ? C 20 ? D 103 ? 1 B DT 10 1_555 C DA 3 1_555 B DT 11 1_555 C DA 1 1_555 0.634 -0.494 4.658 -13.363 -8.171 52.201 0.166 -1.851 4.412 -9.056 14.812 54.342 20 CC_DT20DT21:DA101DA103_DD C 20 ? D 103 ? C 21 ? D 101 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1K4T _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1T8I _atom_sites.fract_transf_matrix[1][1] 0.017433 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001063 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008740 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013517 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_