HEADER AMINOTRANSFERASE 04-OCT-93 1TAT TITLE CRYSTALLINE MITOCHONDRIAL ASPARTATE AMINOTRANSFERASE EXISTS IN ONLY TITLE 2 TWO CONFORMATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.6.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 ORGAN: HEART; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 32644 KEYWDS AMINOTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.HOHENESTER,J.N.JANSONIUS REVDAT 4 29-NOV-17 1TAT 1 REMARK HELIX REVDAT 3 13-JUL-11 1TAT 1 VERSN REVDAT 2 24-FEB-09 1TAT 1 VERSN REVDAT 1 31-JAN-94 1TAT 0 JRNL AUTH E.HOHENESTER,J.N.JANSONIUS JRNL TITL CRYSTALLINE MITOCHONDRIAL ASPARTATE AMINOTRANSFERASE EXISTS JRNL TITL 2 IN ONLY TWO CONFORMATIONS. JRNL REF J.MOL.BIOL. V. 236 963 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8120903 JRNL DOI 10.1016/0022-2836(94)90001-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.N.JANSONIUS,M.G.VINCENT REMARK 1 TITL STRUCTURAL BASIS FOR CATALYSIS BY ASPARTATE AMINOTRANSFERASE REMARK 1 EDIT F.A.JURNAK, A.MCPHERSON REMARK 1 REF BIOLOGICAL MACROMOLECULES V. 3 187 1987 REMARK 1 REF 2 AND ASSEMBLIES REMARK 1 PUBL JOHN WILEY AND SONS, NEW YORK REMARK 1 REFN ISSN 0-471-85142-6 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6322 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.020 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 3.100 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ATOMS OF SIDE CHAINS THAT ARE NOT WELL DEFINED BY THE REMARK 3 ELECTRON DENSITY HAVE BEEN ASSIGNED AN OCCUPANCY OF 0.0 REMARK 4 REMARK 4 1TAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176588. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.35000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.35000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.75000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW REMARK 300 DESCRIBES THE NON-CRYSTALLOGRAPHIC TWO-FOLD AXIS OF THE REMARK 300 DIMER. IT WILL YIELD APPROXIMATE COORDINATES FOR CHAIN *B* REMARK 300 WHEN APPLIED TO CHAIN *A*. THE TWO-FOLD AXIS OF THE DIMER REMARK 300 LIES IN THE BC-PLANE. THE ANGLE BETWEEN THE TWO-FOLD AXIS REMARK 300 AND THE C-AXIS IS 45 DEGREES. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 SER A 3 REMARK 475 SER B 3 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 4 N CA CB OG REMARK 480 GLU A 10 CG CD OE1 OE2 REMARK 480 LYS A 25 CE NZ REMARK 480 ASN A 44 CG OD1 ND2 REMARK 480 ASN A 51 CG OD1 ND2 REMARK 480 LYS A 64 NZ REMARK 480 GLU A 90 CD OE1 OE2 REMARK 480 ASN A 91 CG OD1 ND2 REMARK 480 LYS A 96 CD CE NZ REMARK 480 LYS A 137 CE NZ REMARK 480 ARG A 148 NE CZ NH1 NH2 REMARK 480 GLN A 154 CD OE1 NE2 REMARK 480 GLN A 156 OE1 NE2 REMARK 480 LYS A 164 CD CE NZ REMARK 480 GLU A 175 CD OE1 OE2 REMARK 480 SER A 178 OG REMARK 480 LYS A 179 CE NZ REMARK 480 GLU A 182 CD OE1 OE2 REMARK 480 GLN A 202 CD OE1 NE2 REMARK 480 LYS A 206 NZ REMARK 480 SER A 210 OG REMARK 480 LYS A 213 CD CE NZ REMARK 480 LYS A 214 CD CE NZ REMARK 480 ARG A 235 CD NE CZ NH1 NH2 REMARK 480 GLU A 245 CD OE1 OE2 REMARK 480 ARG A 275 CD NE CZ NH1 NH2 REMARK 480 GLU A 278 CD OE1 OE2 REMARK 480 LYS A 281 CD CE NZ REMARK 480 GLU A 314 CD OE1 OE2 REMARK 480 LYS A 317 CD CE NZ REMARK 480 LYS A 324 CD CE NZ REMARK 480 ILE A 331 CG1 CG2 CD1 REMARK 480 LYS A 342 CD CE NZ REMARK 480 LYS A 343 CD CE NZ REMARK 480 ASN A 349 CG OD1 ND2 REMARK 480 GLN A 351 CG CD OE1 NE2 REMARK 480 LYS A 366 CD CE NZ REMARK 480 GLU A 368 CD OE1 OE2 REMARK 480 GLN A 369 CD OE1 NE2 REMARK 480 GLU A 371 CD OE1 OE2 REMARK 480 LYS A 383 CD CE NZ REMARK 480 SER A 394 OG REMARK 480 LYS A 410 CE NZ OXT REMARK 480 SER B 4 N CA OG REMARK 480 SER B 7 OG REMARK 480 GLU B 10 CG CD OE1 OE2 REMARK 480 MET B 11 CE REMARK 480 LYS B 25 CE NZ REMARK 480 LYS B 46 CE NZ REMARK 480 LYS B 63 CG CD CE NZ REMARK 480 LYS B 64 NZ REMARK 480 ARG B 81 NE CZ NH1 NH2 REMARK 480 GLU B 90 CD OE1 OE2 REMARK 480 ASN B 91 CB CG OD1 ND2 REMARK 480 LYS B 96 CG CD CE NZ REMARK 480 LYS B 137 CD CE NZ REMARK 480 ARG B 148 NE CZ NH1 NH2 REMARK 480 GLN B 154 CG CD OE1 NE2 REMARK 480 LYS B 164 CE NZ REMARK 480 LYS B 179 CD CE NZ REMARK 480 GLN B 202 CD OE1 NE2 REMARK 480 GLU B 203 CD OE1 OE2 REMARK 480 LYS B 206 CE NZ REMARK 480 GLU B 207 CD OE1 OE2 REMARK 480 LYS B 213 CE NZ REMARK 480 ARG B 235 CD NE CZ NH1 NH2 REMARK 480 ARG B 275 CD NE CZ NH1 NH2 REMARK 480 ASP B 276 CG OD1 OD2 REMARK 480 GLU B 278 CD OE1 OE2 REMARK 480 LYS B 281 CD CE NZ REMARK 480 GLU B 314 CG CD OE1 OE2 REMARK 480 LYS B 317 CD CE NZ REMARK 480 LYS B 324 CD CE NZ REMARK 480 LYS B 342 CD CE NZ REMARK 480 LYS B 343 CG CD CE NZ REMARK 480 SER B 347 OG REMARK 480 GLN B 351 CG CD OE1 NE2 REMARK 480 LYS B 366 CD CE NZ REMARK 480 GLN B 369 CD OE1 NE2 REMARK 480 GLU B 371 CD OE1 OE2 REMARK 480 LYS B 375 CD CE NZ REMARK 480 LYS B 383 CD CE NZ REMARK 480 LYS B 410 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 57 CD GLU A 57 OE1 0.086 REMARK 500 GLU A 93 CD GLU A 93 OE2 0.067 REMARK 500 GLU A 318 CD GLU A 318 OE2 0.075 REMARK 500 GLU A 322 CD GLU A 322 OE1 0.067 REMARK 500 LYS A 343 CE LYS A 343 NZ -0.164 REMARK 500 GLU A 376 CD GLU A 376 OE1 0.068 REMARK 500 GLU B 22 CD GLU B 22 OE1 0.070 REMARK 500 GLU B 57 CD GLU B 57 OE2 0.142 REMARK 500 GLU B 85 CD GLU B 85 OE2 0.074 REMARK 500 GLU B 182 CD GLU B 182 OE1 0.091 REMARK 500 GLU B 245 CD GLU B 245 OE1 0.071 REMARK 500 GLU B 344 CD GLU B 344 OE1 0.069 REMARK 500 GLU B 376 CD GLU B 376 OE1 0.083 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 15 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 15 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP A 27 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 27 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 43 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 43 CB - CG - OD2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ASP A 67 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP A 67 CB - CG - OD2 ANGL. DEV. = -8.2 DEGREES REMARK 500 ASP A 78 CB - CG - OD1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP A 78 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 81 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 121 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP A 130 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 130 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 LYS A 137 N - CA - CB ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG A 148 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 GLN A 156 N - CA - CB ANGL. DEV. = 11.9 DEGREES REMARK 500 ALA A 157 N - CA - CB ANGL. DEV. = -9.3 DEGREES REMARK 500 THR A 165 N - CA - CB ANGL. DEV. = -13.0 DEGREES REMARK 500 SER A 184 N - CA - CB ANGL. DEV. = 10.6 DEGREES REMARK 500 ASP A 232 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 232 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 236 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 249 CB - CG - OD1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 249 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TYR A 256 CB - CG - CD2 ANGL. DEV. = 3.9 DEGREES REMARK 500 VAL A 272 CG1 - CB - CG2 ANGL. DEV. = -10.1 DEGREES REMARK 500 ASP A 276 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 276 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 304 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 304 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 VAL A 321 CB - CA - C ANGL. DEV. = 12.3 DEGREES REMARK 500 ASP A 355 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 355 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 CYS A 361 CA - CB - SG ANGL. DEV. = -14.0 DEGREES REMARK 500 ARG A 372 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 TYR A 380 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 THR A 409 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 THR B 21 CA - CB - CG2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ASP B 27 CB - CG - OD1 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP B 27 CB - CG - OD2 ANGL. DEV. = -7.0 DEGREES REMARK 500 MET B 33 CG - SD - CE ANGL. DEV. = -9.6 DEGREES REMARK 500 ASP B 67 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 67 CB - CG - OD2 ANGL. DEV. = -8.4 DEGREES REMARK 500 ALA B 74 N - CA - CB ANGL. DEV. = 8.8 DEGREES REMARK 500 ASP B 78 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP B 78 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG B 99 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 99 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 85 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 133.40 101.74 REMARK 500 PRO A 16 -38.87 -36.12 REMARK 500 ILE A 17 -66.11 -105.25 REMARK 500 LEU A 35 38.62 -88.26 REMARK 500 ASP A 43 -5.63 -46.11 REMARK 500 ALA A 87 -76.28 -78.37 REMARK 500 ASN A 91 2.38 -67.13 REMARK 500 SER A 107 -153.42 66.34 REMARK 500 SER A 126 165.78 177.00 REMARK 500 TYR A 160 -60.31 -144.48 REMARK 500 ASP A 169 68.73 -103.66 REMARK 500 LYS A 183 40.96 70.95 REMARK 500 ALA A 192 62.81 60.26 REMARK 500 TYR A 225 54.04 -111.90 REMARK 500 TYR A 263 -98.27 -20.65 REMARK 500 TYR A 295 21.60 -153.54 REMARK 500 SER A 296 -62.01 62.09 REMARK 500 LYS A 383 -13.62 -45.21 REMARK 500 SER B 4 -149.67 -131.87 REMARK 500 ILE B 17 -70.63 -101.01 REMARK 500 ASP B 42 -158.34 -95.37 REMARK 500 LEU B 50 152.00 -48.27 REMARK 500 ARG B 99 21.52 -70.57 REMARK 500 SER B 107 -164.83 61.24 REMARK 500 TYR B 160 -57.98 -145.08 REMARK 500 ASP B 169 66.34 -106.34 REMARK 500 CYS B 191 150.06 179.91 REMARK 500 ALA B 192 60.85 68.95 REMARK 500 TYR B 263 -83.16 -24.40 REMARK 500 ARG B 266 65.05 74.97 REMARK 500 ASP B 276 -160.94 -109.43 REMARK 500 MET B 294 -60.61 -98.30 REMARK 500 TYR B 295 12.80 -145.03 REMARK 500 SER B 296 -74.37 74.03 REMARK 500 PRO B 313 -37.86 -30.86 REMARK 500 PHE B 360 -165.04 -125.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE MALEATE MOLECULES THAT ARE BOUND TO THE ACTIVE SITES A REMARK 600 AND B HAVE NOT BEEN INCLUDED IN THE MODEL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES INTERACTING WITH THE COENZYME PLP REMARK 800 REMARK 800 SITE_IDENTIFIER: BCT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES INTERACTING WITH THE COENZYME PLP REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 411 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE ADVISORY NOTICE: REMARK 999 DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE. REMARK 999 REMARK 999 SWISS-PROT ENTRY NAME: AATM_CHICK REMARK 999 REMARK 999 SWISS-PROT RESIDUE PDB SEQRES REMARK 999 NAME NUMBER NAME CHAIN SEQ/INSERT CODE REMARK 999 SER 47 PRO A 47 REMARK 999 SER 47 PRO B 47 DBREF 1TAT A 3 410 UNP P00508 AATM_CHICK 23 423 DBREF 1TAT B 3 410 UNP P00508 AATM_CHICK 23 423 SEQADV 1TAT PRO A 47 UNP P00508 SER 67 CONFLICT SEQADV 1TAT PRO B 47 UNP P00508 SER 67 CONFLICT SEQRES 1 A 401 SER SER TRP TRP SER HIS VAL GLU MET GLY PRO PRO ASP SEQRES 2 A 401 PRO ILE LEU GLY VAL THR GLU ALA PHE LYS ARG ASP THR SEQRES 3 A 401 ASN SER LYS LYS MET ASN LEU GLY VAL GLY ALA TYR ARG SEQRES 4 A 401 ASP ASP ASN GLY LYS PRO TYR VAL LEU ASN CYS VAL ARG SEQRES 5 A 401 LYS ALA GLU ALA MET ILE ALA ALA LYS LYS MET ASP LYS SEQRES 6 A 401 GLU TYR LEU PRO ILE ALA GLY LEU ALA ASP PHE THR ARG SEQRES 7 A 401 ALA SER ALA GLU LEU ALA LEU GLY GLU ASN SER GLU ALA SEQRES 8 A 401 PHE LYS SER GLY ARG TYR VAL THR VAL GLN GLY ILE SER SEQRES 9 A 401 GLY THR GLY SER LEU ARG VAL GLY ALA ASN PHE LEU GLN SEQRES 10 A 401 ARG PHE PHE LYS PHE SER ARG ASP VAL TYR LEU PRO LYS SEQRES 11 A 401 PRO SER TRP GLY ASN HIS THR PRO ILE PHE ARG ASP ALA SEQRES 12 A 401 GLY LEU GLN LEU GLN ALA TYR ARG TYR TYR ASP PRO LYS SEQRES 13 A 401 THR CYS SER LEU ASP PHE THR GLY ALA MET GLU ASP ILE SEQRES 14 A 401 SER LYS ILE PRO GLU LYS SER ILE ILE LEU LEU HIS ALA SEQRES 15 A 401 CYS ALA HIS ASN PRO THR GLY VAL ASP PRO ARG GLN GLU SEQRES 16 A 401 GLN TRP LYS GLU LEU ALA SER VAL VAL LYS LYS ARG ASN SEQRES 17 A 401 LEU LEU ALA TYR PHE ASP MET ALA TYR GLN GLY PHE ALA SEQRES 18 A 401 SER GLY ASP ILE ASN ARG ASP ALA TRP ALA LEU ARG HIS SEQRES 19 A 401 PHE ILE GLU GLN GLY ILE ASP VAL VAL LEU SER GLN SER SEQRES 20 A 401 TYR ALA LYS ASN MET GLY LEU TYR GLY GLU ARG ALA GLY SEQRES 21 A 401 ALA PHE THR VAL ILE CYS ARG ASP ALA GLU GLU ALA LYS SEQRES 22 A 401 ARG VAL GLU SER GLN LEU LYS ILE LEU ILE ARG PRO MET SEQRES 23 A 401 TYR SER ASN PRO PRO MET ASN GLY ALA ARG ILE ALA SER SEQRES 24 A 401 LEU ILE LEU ASN THR PRO GLU LEU ARG LYS GLU TRP LEU SEQRES 25 A 401 VAL GLU VAL LYS GLY MET ALA ASP ARG ILE ILE SER MET SEQRES 26 A 401 ARG THR GLN LEU VAL SER ASN LEU LYS LYS GLU GLY SER SEQRES 27 A 401 SER HIS ASN TRP GLN HIS ILE THR ASP GLN ILE GLY MET SEQRES 28 A 401 PHE CYS PHE THR GLY LEU LYS PRO GLU GLN VAL GLU ARG SEQRES 29 A 401 LEU THR LYS GLU PHE SER ILE TYR MET THR LYS ASP GLY SEQRES 30 A 401 ARG ILE SER VAL ALA GLY VAL ALA SER SER ASN VAL GLY SEQRES 31 A 401 TYR LEU ALA HIS ALA ILE HIS GLN VAL THR LYS SEQRES 1 B 401 SER SER TRP TRP SER HIS VAL GLU MET GLY PRO PRO ASP SEQRES 2 B 401 PRO ILE LEU GLY VAL THR GLU ALA PHE LYS ARG ASP THR SEQRES 3 B 401 ASN SER LYS LYS MET ASN LEU GLY VAL GLY ALA TYR ARG SEQRES 4 B 401 ASP ASP ASN GLY LYS PRO TYR VAL LEU ASN CYS VAL ARG SEQRES 5 B 401 LYS ALA GLU ALA MET ILE ALA ALA LYS LYS MET ASP LYS SEQRES 6 B 401 GLU TYR LEU PRO ILE ALA GLY LEU ALA ASP PHE THR ARG SEQRES 7 B 401 ALA SER ALA GLU LEU ALA LEU GLY GLU ASN SER GLU ALA SEQRES 8 B 401 PHE LYS SER GLY ARG TYR VAL THR VAL GLN GLY ILE SER SEQRES 9 B 401 GLY THR GLY SER LEU ARG VAL GLY ALA ASN PHE LEU GLN SEQRES 10 B 401 ARG PHE PHE LYS PHE SER ARG ASP VAL TYR LEU PRO LYS SEQRES 11 B 401 PRO SER TRP GLY ASN HIS THR PRO ILE PHE ARG ASP ALA SEQRES 12 B 401 GLY LEU GLN LEU GLN ALA TYR ARG TYR TYR ASP PRO LYS SEQRES 13 B 401 THR CYS SER LEU ASP PHE THR GLY ALA MET GLU ASP ILE SEQRES 14 B 401 SER LYS ILE PRO GLU LYS SER ILE ILE LEU LEU HIS ALA SEQRES 15 B 401 CYS ALA HIS ASN PRO THR GLY VAL ASP PRO ARG GLN GLU SEQRES 16 B 401 GLN TRP LYS GLU LEU ALA SER VAL VAL LYS LYS ARG ASN SEQRES 17 B 401 LEU LEU ALA TYR PHE ASP MET ALA TYR GLN GLY PHE ALA SEQRES 18 B 401 SER GLY ASP ILE ASN ARG ASP ALA TRP ALA LEU ARG HIS SEQRES 19 B 401 PHE ILE GLU GLN GLY ILE ASP VAL VAL LEU SER GLN SER SEQRES 20 B 401 TYR ALA LYS ASN MET GLY LEU TYR GLY GLU ARG ALA GLY SEQRES 21 B 401 ALA PHE THR VAL ILE CYS ARG ASP ALA GLU GLU ALA LYS SEQRES 22 B 401 ARG VAL GLU SER GLN LEU LYS ILE LEU ILE ARG PRO MET SEQRES 23 B 401 TYR SER ASN PRO PRO MET ASN GLY ALA ARG ILE ALA SER SEQRES 24 B 401 LEU ILE LEU ASN THR PRO GLU LEU ARG LYS GLU TRP LEU SEQRES 25 B 401 VAL GLU VAL LYS GLY MET ALA ASP ARG ILE ILE SER MET SEQRES 26 B 401 ARG THR GLN LEU VAL SER ASN LEU LYS LYS GLU GLY SER SEQRES 27 B 401 SER HIS ASN TRP GLN HIS ILE THR ASP GLN ILE GLY MET SEQRES 28 B 401 PHE CYS PHE THR GLY LEU LYS PRO GLU GLN VAL GLU ARG SEQRES 29 B 401 LEU THR LYS GLU PHE SER ILE TYR MET THR LYS ASP GLY SEQRES 30 B 401 ARG ILE SER VAL ALA GLY VAL ALA SER SER ASN VAL GLY SEQRES 31 B 401 TYR LEU ALA HIS ALA ILE HIS GLN VAL THR LYS HET PLP A 411 15 HET PLP B 411 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) HELIX 1 A1 PRO A 16 ARG A 26 1 11 HELIX 2 A2 ASN A 51 LYS A 63 1 13 HELIX 3 A3 ALA A 77 LEU A 88 1 12 HELIX 4 A4 GLU A 93 SER A 97 1 5 HELIX 5 A5 GLY A 108 PHE A 122 1 15 HELIX 6 A6 GLY A 141 ALA A 150 1 10 HELIX 7 A7 PHE A 170 LYS A 179 1 10 HELIX 8 A8 GLN A 202 ARG A 215 1 14 HELIX 9 A9 ILE A 233 GLN A 246 1 14 HELIX 10 A10 ALA A 277 PRO A 293 1 17 HELIX 11 A11 MET A 300 ASN A 311 1 12 HELIX 12 A12 PRO A 313 GLU A 344 1 32 HELIX 13 A13 GLN A 351 ASP A 355 1 5 HELIX 14 A14 PRO A 367 PHE A 377 1 11 HELIX 15 A15 SER A 394 THR A 409 1 15 HELIX 16 B1 PRO B 16 ARG B 26 1 11 HELIX 17 B2 ASN B 51 LYS B 63 1 13 HELIX 18 B3 ALA B 77 LEU B 88 1 12 HELIX 19 B4 GLU B 93 SER B 97 1 5 HELIX 20 B5 GLY B 108 PHE B 122 1 15 HELIX 21 B6 GLY B 141 ALA B 150 1 10 HELIX 22 B7 PHE B 170 LYS B 179 1 10 HELIX 23 B8 GLN B 202 ARG B 215 1 14 HELIX 24 B9 ILE B 233 GLN B 246 1 14 HELIX 25 B10 ALA B 277 PRO B 293 1 17 HELIX 26 B11 MET B 300 ASN B 311 1 12 HELIX 27 B12 PRO B 313 GLU B 344 1 32 HELIX 28 B13 GLN B 351 ASP B 355 1 5 HELIX 29 B14 PRO B 367 PHE B 377 1 11 HELIX 30 B15 SER B 394 THR B 409 1 15 SHEET 1 S1A 7 ARG A 99 GLY A 105 0 SHEET 2 S1A 7 GLY A 268 CYS A 274 -1 N CYS A 274 O ARG A 99 SHEET 3 S1A 7 VAL A 250 SER A 255 -1 O VAL A 250 N ILE A 273 SHEET 4 S1A 7 LEU A 218 MET A 223 1 O ALA A 219 N VAL A 251 SHEET 5 S1A 7 SER A 184 HIS A 189 1 O SER A 184 N LEU A 218 SHEET 6 S1A 7 ARG A 129 LYS A 137 1 O ASP A 130 N ILE A 185 SHEET 7 S1A 7 GLN A 154 TYR A 158 1 N GLN A 154 O ARG A 129 SHEET 1 S2A 2 MET A 33 LEU A 35 0 SHEET 2 S2A 2 SER A 378 TYR A 380 1 O SER A 378 N MET A 33 SHEET 1 S3A 2 MET A 359 THR A 363 0 SHEET 2 S3A 2 GLY A 385 VAL A 389 -1 N VAL A 389 O MET A 359 SHEET 1 S1B 7 ARG B 99 GLY B 105 0 SHEET 2 S1B 7 GLY B 268 CYS B 274 -1 N CYS B 274 O ARG B 99 SHEET 3 S1B 7 VAL B 250 SER B 255 -1 O VAL B 250 N ILE B 273 SHEET 4 S1B 7 LEU B 218 MET B 223 1 O ALA B 219 N VAL B 251 SHEET 5 S1B 7 SER B 184 HIS B 189 1 O SER B 184 N LEU B 218 SHEET 6 S1B 7 ARG B 129 LYS B 137 1 O ASP B 130 N ILE B 185 SHEET 7 S1B 7 GLN B 154 TYR B 158 1 N GLN B 154 O ARG B 129 SHEET 1 S2B 2 MET B 33 LEU B 35 0 SHEET 2 S2B 2 SER B 378 TYR B 380 1 O SER B 378 N MET B 33 SHEET 1 S3B 2 MET B 359 THR B 363 0 SHEET 2 S3B 2 GLY B 385 VAL B 389 -1 N VAL B 389 O MET B 359 LINK NZ LYS A 258 C4A PLP A 411 1555 1555 1.27 LINK NZ LYS B 258 C4A PLP B 411 1555 1555 1.29 CISPEP 1 SER A 3 SER A 4 0 -2.18 CISPEP 2 LYS A 137 PRO A 138 0 0.38 CISPEP 3 ASN A 194 PRO A 195 0 2.01 CISPEP 4 LYS B 137 PRO B 138 0 -3.31 CISPEP 5 ASN B 194 PRO B 195 0 5.86 SITE 1 ACT 24 ASP A 15 ILE A 17 LEU A 18 VAL A 37 SITE 2 ACT 24 GLY A 38 ALA A 39 TYR B 70 SER A 107 SITE 3 ACT 24 GLY A 108 THR A 109 TRP A 140 ASN A 194 SITE 4 ACT 24 ASP A 222 ALA A 224 TYR A 225 SER A 255 SITE 5 ACT 24 LYS A 258 ARG A 266 ARG B 292 SER B 296 SITE 6 ACT 24 ASN B 297 PHE A 360 ARG A 386 PLP A 411 SITE 1 BCT 24 ASP B 15 ILE B 17 LEU B 18 VAL B 37 SITE 2 BCT 24 GLY B 38 ALA B 39 TYR A 70 SER B 107 SITE 3 BCT 24 GLY B 108 THR B 109 TRP B 140 ASN B 194 SITE 4 BCT 24 ASP B 222 ALA B 224 TYR B 225 SER B 255 SITE 5 BCT 24 LYS B 258 ARG B 266 ARG A 292 SER A 296 SITE 6 BCT 24 ASN A 297 PHE B 360 ARG B 386 PLP B 411 SITE 1 AC1 13 SER A 107 GLY A 108 THR A 109 TRP A 140 SITE 2 AC1 13 ASN A 194 ASP A 222 ALA A 224 TYR A 225 SITE 3 AC1 13 SER A 255 ALA A 257 LYS A 258 ARG A 266 SITE 4 AC1 13 TYR B 70 SITE 1 AC2 12 TYR A 70 SER B 107 GLY B 108 THR B 109 SITE 2 AC2 12 TRP B 140 ASN B 194 ASP B 222 ALA B 224 SITE 3 AC2 12 TYR B 225 SER B 255 LYS B 258 ARG B 266 CRYST1 69.500 89.600 144.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014388 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006911 0.00000 MTRIX1 1 -0.999900 -0.009500 -0.007200 49.69000 1 MTRIX2 1 -0.008000 0.080300 0.996700 18.52000 1 MTRIX3 1 -0.008900 0.996700 -0.080300 -19.77000 1