HEADER HYDROLASE 24-MAY-04 1TE2 TITLE PUTATIVE PHOSPHATASE YNIC FROM ESCHERICHIA COLI K12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-DEOXYGLUCOSE-6-P PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15 KEYWDS STRUCTURAL GENOMICS, PHOSPHATASE, PHOSPHATES, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,A.JOACHIMIAK,E.EVDOKIMOVA,A.SAVCHENKO,A.EDWARDS,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 6 24-JUN-15 1TE2 1 SOURCE REVDAT 5 17-JUN-15 1TE2 1 COMPND SOURCE DBREF SEQRES REVDAT 5 2 1 SEQADV LINK REMARK REVDAT 4 13-JUL-11 1TE2 1 VERSN REVDAT 3 24-FEB-09 1TE2 1 VERSN REVDAT 2 18-JAN-05 1TE2 1 AUTHOR KEYWDS REMARK REVDAT 1 03-AUG-04 1TE2 0 JRNL AUTH Y.KIM,A.JOACHIMIAK,E.EVDOKIMOVA,A.SAVCHENKO,A.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE PHOSPHATASE YNIC FROM JRNL TITL 2 ESCHERICHIA COLI K12 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0000 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 33858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3770 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1617 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 0.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3350 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 637 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : -2.14000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.54000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.238 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3495 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3351 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4760 ; 1.300 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7778 ; 0.834 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 449 ; 4.802 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;33.025 ;24.126 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 616 ;13.797 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;16.916 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 560 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3873 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 643 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 973 ; 0.336 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4327 ; 0.258 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1988 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 454 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 12 ; 0.176 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.265 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 75 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 46 ; 0.223 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2326 ; 0.787 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 884 ; 0.152 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3615 ; 1.130 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1341 ; 1.863 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1145 ; 2.818 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TE2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAY-04. REMARK 100 THE RCSB ID CODE IS RCSB022572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794, 0.9795, 0.956 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38493 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 25.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CALCIUM CHLORIDE PEG 3350 OR PEGMME REMARK 280 3350, SODIUM CACODYLATE, PH 6.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.22350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: UNKNOWN, BUT MOST LIKELY A DIMER AS IT IS IN THE ASYMMETRIC REMARK 300 UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 42.45045 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 48.20144 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 223 REMARK 465 SER A 224 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 GLY B 223 REMARK 465 SER B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 136 O HOH B 930 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE B 56 SE MSE B 56 CE 0.407 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = 9.1 DEGREES REMARK 500 ASP A 199 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 55 CB - CG - OD2 ANGL. DEV. = 8.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 14 -83.88 -93.81 REMARK 500 ARG A 185 32.25 72.47 REMARK 500 MSE B 14 -71.76 -102.96 REMARK 500 LEU B 17 -55.03 -121.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 881 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH A 931 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH A 981 DISTANCE = 5.12 ANGSTROMS REMARK 525 HOH A 986 DISTANCE = 7.57 ANGSTROMS REMARK 525 HOH A1026 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 905 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B1010 DISTANCE = 7.06 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 AUTHOR STATED THAT THE MISSING ATOMS OF 2PL MAY BE DUE REMARK 600 TO DISORDER. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 702 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 725 O REMARK 620 2 HOH A 720 O 62.3 REMARK 620 3 HOH A 713 O 104.7 96.5 REMARK 620 4 ASP A 173 OD1 74.1 135.5 85.9 REMARK 620 5 ASP A 13 OD2 147.9 149.5 81.1 74.9 REMARK 620 6 PGA A 711 O4P 130.0 68.5 88.8 155.8 81.0 REMARK 620 7 ASP A 15 O 87.1 93.1 167.3 93.0 86.4 87.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 133 OD1 REMARK 620 2 ASP B 130 O 94.5 REMARK 620 3 ASP B 133 OD2 51.2 137.0 REMARK 620 4 HOH B 743 O 77.7 79.6 111.0 REMARK 620 5 ASP A 133 OD1 109.9 103.3 72.5 171.4 REMARK 620 6 ASP A 133 OD2 76.1 68.2 77.7 136.2 51.6 REMARK 620 7 HOH A 738 O 168.0 81.9 136.9 90.4 82.1 112.6 REMARK 620 8 ASP A 130 O 100.1 152.0 69.1 80.3 94.1 138.6 78.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 106 O REMARK 620 2 HOH B 829 O 85.7 REMARK 620 3 HOH B 927 O 162.1 81.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 704 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PGA B 712 O3P REMARK 620 2 HOH B 716 O 86.0 REMARK 620 3 HOH B 924 O 64.4 92.8 REMARK 620 4 ASP B 13 OD2 81.3 84.9 145.7 REMARK 620 5 ASP B 15 O 86.7 167.0 93.8 83.3 REMARK 620 6 ASP B 173 OD1 157.0 89.9 138.5 75.8 92.6 REMARK 620 7 HOH B 740 O 127.6 104.3 63.9 149.6 88.7 75.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGA A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGA B 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 704 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5035 RELATED DB: TARGETDB DBREF 1TE2 A 1 222 UNP C3T7L2 C3T7L2_ECOLX 1 222 DBREF 1TE2 B 1 222 UNP C3T7L2 C3T7L2_ECOLX 1 222 SEQADV 1TE2 GLY A -1 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 HIS A 0 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 GLY A 223 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 SER A 224 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 GLY B -1 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 HIS B 0 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 GLY B 223 UNP C3T7L2 EXPRESSION TAG SEQADV 1TE2 SER B 224 UNP C3T7L2 EXPRESSION TAG SEQRES 1 A 226 GLY HIS MSE SER THR PRO ARG GLN ILE LEU ALA ALA ILE SEQRES 2 A 226 PHE ASP MSE ASP GLY LEU LEU ILE ASP SER GLU PRO LEU SEQRES 3 A 226 TRP ASP ARG ALA GLU LEU ASP VAL MSE ALA SER LEU GLY SEQRES 4 A 226 VAL ASP ILE SER ARG ARG ASN GLU LEU PRO ASP THR LEU SEQRES 5 A 226 GLY LEU ARG ILE ASP MSE VAL VAL ASP LEU TRP TYR ALA SEQRES 6 A 226 ARG GLN PRO TRP ASN GLY PRO SER ARG GLN GLU VAL VAL SEQRES 7 A 226 GLU ARG VAL ILE ALA ARG ALA ILE SER LEU VAL GLU GLU SEQRES 8 A 226 THR ARG PRO LEU LEU PRO GLY VAL ARG GLU ALA VAL ALA SEQRES 9 A 226 LEU CYS LYS GLU GLN GLY LEU LEU VAL GLY LEU ALA SER SEQRES 10 A 226 ALA SER PRO LEU HIS MSE LEU GLU LYS VAL LEU THR MSE SEQRES 11 A 226 PHE ASP LEU ARG ASP SER PHE ASP ALA LEU ALA SER ALA SEQRES 12 A 226 GLU LYS LEU PRO TYR SER LYS PRO HIS PRO GLN VAL TYR SEQRES 13 A 226 LEU ASP CYS ALA ALA LYS LEU GLY VAL ASP PRO LEU THR SEQRES 14 A 226 CYS VAL ALA LEU GLU ASP SER VAL ASN GLY MSE ILE ALA SEQRES 15 A 226 SER LYS ALA ALA ARG MSE ARG SER ILE VAL VAL PRO ALA SEQRES 16 A 226 PRO GLU ALA GLN ASN ASP PRO ARG PHE VAL LEU ALA ASN SEQRES 17 A 226 VAL LYS LEU SER SER LEU THR GLU LEU THR ALA LYS ASP SEQRES 18 A 226 LEU LEU GLY GLY SER SEQRES 1 B 226 GLY HIS MSE SER THR PRO ARG GLN ILE LEU ALA ALA ILE SEQRES 2 B 226 PHE ASP MSE ASP GLY LEU LEU ILE ASP SER GLU PRO LEU SEQRES 3 B 226 TRP ASP ARG ALA GLU LEU ASP VAL MSE ALA SER LEU GLY SEQRES 4 B 226 VAL ASP ILE SER ARG ARG ASN GLU LEU PRO ASP THR LEU SEQRES 5 B 226 GLY LEU ARG ILE ASP MSE VAL VAL ASP LEU TRP TYR ALA SEQRES 6 B 226 ARG GLN PRO TRP ASN GLY PRO SER ARG GLN GLU VAL VAL SEQRES 7 B 226 GLU ARG VAL ILE ALA ARG ALA ILE SER LEU VAL GLU GLU SEQRES 8 B 226 THR ARG PRO LEU LEU PRO GLY VAL ARG GLU ALA VAL ALA SEQRES 9 B 226 LEU CYS LYS GLU GLN GLY LEU LEU VAL GLY LEU ALA SER SEQRES 10 B 226 ALA SER PRO LEU HIS MSE LEU GLU LYS VAL LEU THR MSE SEQRES 11 B 226 PHE ASP LEU ARG ASP SER PHE ASP ALA LEU ALA SER ALA SEQRES 12 B 226 GLU LYS LEU PRO TYR SER LYS PRO HIS PRO GLN VAL TYR SEQRES 13 B 226 LEU ASP CYS ALA ALA LYS LEU GLY VAL ASP PRO LEU THR SEQRES 14 B 226 CYS VAL ALA LEU GLU ASP SER VAL ASN GLY MSE ILE ALA SEQRES 15 B 226 SER LYS ALA ALA ARG MSE ARG SER ILE VAL VAL PRO ALA SEQRES 16 B 226 PRO GLU ALA GLN ASN ASP PRO ARG PHE VAL LEU ALA ASN SEQRES 17 B 226 VAL LYS LEU SER SER LEU THR GLU LEU THR ALA LYS ASP SEQRES 18 B 226 LEU LEU GLY GLY SER MODRES 1TE2 MSE A 14 MET SELENOMETHIONINE MODRES 1TE2 MSE A 33 MET SELENOMETHIONINE MODRES 1TE2 MSE A 56 MET SELENOMETHIONINE MODRES 1TE2 MSE A 121 MET SELENOMETHIONINE MODRES 1TE2 MSE A 128 MET SELENOMETHIONINE MODRES 1TE2 MSE A 178 MET SELENOMETHIONINE MODRES 1TE2 MSE A 186 MET SELENOMETHIONINE MODRES 1TE2 MSE B 14 MET SELENOMETHIONINE MODRES 1TE2 MSE B 33 MET SELENOMETHIONINE MODRES 1TE2 MSE B 56 MET SELENOMETHIONINE MODRES 1TE2 MSE B 121 MET SELENOMETHIONINE MODRES 1TE2 MSE B 128 MET SELENOMETHIONINE MODRES 1TE2 MSE B 178 MET SELENOMETHIONINE MODRES 1TE2 MSE B 186 MET SELENOMETHIONINE HET MSE A 14 16 HET MSE A 33 8 HET MSE A 56 8 HET MSE A 121 8 HET MSE A 128 16 HET MSE A 178 8 HET MSE A 186 8 HET MSE B 14 8 HET MSE B 33 8 HET MSE B 56 16 HET MSE B 121 8 HET MSE B 128 8 HET MSE B 178 8 HET MSE B 186 8 HET PGA A 711 8 HET PGA B 712 8 HET CA B 701 1 HET CA A 702 1 HET CA B 703 1 HET CA B 704 1 HETNAM MSE SELENOMETHIONINE HETNAM PGA 2-PHOSPHOGLYCOLIC ACID HETNAM CA CALCIUM ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 PGA 2(C2 H5 O6 P) FORMUL 5 CA 4(CA 2+) FORMUL 9 HOH *637(H2 O) HELIX 1 1 SER A 21 LEU A 36 1 16 HELIX 2 2 ASP A 39 LEU A 46 5 8 HELIX 3 3 ARG A 53 GLN A 65 1 13 HELIX 4 4 SER A 71 ARG A 91 1 21 HELIX 5 5 GLY A 96 GLN A 107 1 12 HELIX 6 6 PRO A 118 PHE A 129 1 12 HELIX 7 7 ASP A 130 ASP A 130 5 1 HELIX 8 8 LEU A 131 PHE A 135 5 5 HELIX 9 9 PRO A 151 GLY A 162 1 12 HELIX 10 10 ASP A 164 LEU A 166 5 3 HELIX 11 11 SER A 174 ALA A 184 1 11 HELIX 12 12 ASP A 199 ALA A 205 5 7 HELIX 13 13 SER A 211 LEU A 215 5 5 HELIX 14 14 THR A 216 GLY A 222 1 7 HELIX 15 15 SER B 21 LEU B 36 1 16 HELIX 16 16 ASP B 39 LEU B 46 5 8 HELIX 17 17 ARG B 53 GLN B 65 1 13 HELIX 18 18 SER B 71 ARG B 91 1 21 HELIX 19 19 GLY B 96 GLN B 107 1 12 HELIX 20 20 PRO B 118 PHE B 129 1 12 HELIX 21 21 ASP B 130 ASP B 130 5 1 HELIX 22 22 LEU B 131 PHE B 135 5 5 HELIX 23 23 PRO B 151 GLY B 162 1 12 HELIX 24 24 ASP B 164 LEU B 166 5 3 HELIX 25 25 SER B 174 ALA B 184 1 11 HELIX 26 26 ALA B 193 GLN B 197 5 5 HELIX 27 27 ASP B 199 ALA B 205 5 7 HELIX 28 28 SER B 211 LEU B 215 5 5 HELIX 29 29 THR B 216 GLY B 222 1 7 SHEET 1 A 6 ALA A 137 SER A 140 0 SHEET 2 A 6 LEU A 110 SER A 115 1 N SER A 115 O ALA A 139 SHEET 3 A 6 ALA A 9 PHE A 12 1 N ALA A 10 O GLY A 112 SHEET 4 A 6 CYS A 168 GLU A 172 1 O VAL A 169 N ILE A 11 SHEET 5 A 6 ARG A 187 VAL A 190 1 O ARG A 187 N ALA A 170 SHEET 6 A 6 VAL A 207 LYS A 208 1 O VAL A 207 N VAL A 190 SHEET 1 B 6 ALA B 137 SER B 140 0 SHEET 2 B 6 LEU B 110 SER B 115 1 N SER B 115 O ALA B 139 SHEET 3 B 6 ALA B 9 PHE B 12 1 N PHE B 12 O GLY B 112 SHEET 4 B 6 CYS B 168 GLU B 172 1 O VAL B 169 N ILE B 11 SHEET 5 B 6 ARG B 187 VAL B 190 1 O ARG B 187 N ALA B 170 SHEET 6 B 6 VAL B 207 LYS B 208 1 O VAL B 207 N VAL B 190 LINK C ASP A 13 N AMSE A 14 1555 1555 1.33 LINK C ASP A 13 N BMSE A 14 1555 1555 1.33 LINK C AMSE A 14 N ASP A 15 1555 1555 1.32 LINK C BMSE A 14 N ASP A 15 1555 1555 1.34 LINK C VAL A 32 N MSE A 33 1555 1555 1.33 LINK C MSE A 33 N ALA A 34 1555 1555 1.32 LINK C AASP A 55 N MSE A 56 1555 1555 1.33 LINK C BASP A 55 N MSE A 56 1555 1555 1.33 LINK C MSE A 56 N VAL A 57 1555 1555 1.33 LINK C HIS A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N LEU A 122 1555 1555 1.33 LINK C THR A 127 N AMSE A 128 1555 1555 1.31 LINK C THR A 127 N BMSE A 128 1555 1555 1.36 LINK C AMSE A 128 N PHE A 129 1555 1555 1.34 LINK C BMSE A 128 N PHE A 129 1555 1555 1.32 LINK C GLY A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N ILE A 179 1555 1555 1.33 LINK C ARG A 185 N MSE A 186 1555 1555 1.33 LINK C MSE A 186 N ARG A 187 1555 1555 1.33 LINK CA CA A 702 O HOH A 725 1555 1555 2.40 LINK CA CA A 702 O HOH A 720 1555 1555 2.59 LINK CA CA A 702 O HOH A 713 1555 1555 2.47 LINK CA CA A 702 OD1 ASP A 173 1555 1555 2.34 LINK CA CA A 702 OD2 ASP A 13 1555 1555 2.34 LINK CA CA A 702 O4P PGA A 711 1555 1555 2.08 LINK CA CA A 702 O ASP A 15 1555 1555 2.25 LINK C ASP B 13 N MSE B 14 1555 1555 1.33 LINK C MSE B 14 N ASP B 15 1555 1555 1.33 LINK C VAL B 32 N MSE B 33 1555 1555 1.33 LINK C MSE B 33 N ALA B 34 1555 1555 1.33 LINK C AASP B 55 N AMSE B 56 1555 1555 1.35 LINK C BASP B 55 N BMSE B 56 1555 1555 1.32 LINK C AMSE B 56 N VAL B 57 1555 1555 1.33 LINK C BMSE B 56 N VAL B 57 1555 1555 1.33 LINK C HIS B 120 N MSE B 121 1555 1555 1.33 LINK C MSE B 121 N LEU B 122 1555 1555 1.33 LINK C THR B 127 N MSE B 128 1555 1555 1.34 LINK C MSE B 128 N PHE B 129 1555 1555 1.32 LINK C GLY B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N ILE B 179 1555 1555 1.33 LINK C ARG B 185 N MSE B 186 1555 1555 1.33 LINK C MSE B 186 N ARG B 187 1555 1555 1.32 LINK CA CA B 701 OD1 ASP B 133 1555 1555 2.46 LINK CA CA B 701 O ASP B 130 1555 1555 2.34 LINK CA CA B 701 OD2 ASP B 133 1555 1555 2.55 LINK CA CA B 701 O HOH B 743 1555 1555 2.49 LINK CA CA B 703 O GLU B 106 1555 1555 2.44 LINK CA CA B 703 O HOH B 829 1555 1555 2.24 LINK CA CA B 703 O HOH B 927 1555 1555 2.43 LINK CA CA B 704 O3P PGA B 712 1555 1555 2.04 LINK CA CA B 704 O HOH B 716 1555 1555 2.50 LINK CA CA B 704 O HOH B 924 1555 1555 2.66 LINK CA CA B 704 OD2 ASP B 13 1555 1555 2.41 LINK CA CA B 704 O ASP B 15 1555 1555 2.31 LINK CA CA B 704 OD1 ASP B 173 1555 1555 2.31 LINK CA CA B 704 O HOH B 740 1555 1555 2.40 LINK CA CA B 701 OD1 ASP A 133 1555 1656 2.42 LINK CA CA B 701 OD2 ASP A 133 1555 1656 2.56 LINK CA CA B 701 O HOH A 738 1555 1656 2.52 LINK CA CA B 701 O ASP A 130 1555 1656 2.36 CISPEP 1 LYS A 148 PRO A 149 0 12.81 CISPEP 2 LYS B 148 PRO B 149 0 12.42 SITE 1 AC1 10 ASP A 13 MSE A 14 ASP A 15 GLY A 51 SITE 2 AC1 10 SER A 115 ALA A 116 LYS A 148 CA A 702 SITE 3 AC1 10 HOH A 713 HOH A 720 SITE 1 AC2 11 ASP B 13 MSE B 14 ASP B 15 GLY B 51 SITE 2 AC2 11 SER B 115 ALA B 116 LYS B 148 CA B 704 SITE 3 AC2 11 HOH B 716 HOH B 860 HOH B 924 SITE 1 AC3 6 ASP A 130 ASP A 133 HOH A 738 ASP B 130 SITE 2 AC3 6 ASP B 133 HOH B 743 SITE 1 AC4 7 ASP A 13 ASP A 15 ASP A 173 PGA A 711 SITE 2 AC4 7 HOH A 713 HOH A 720 HOH A 725 SITE 1 AC5 3 GLU B 106 HOH B 829 HOH B 927 SITE 1 AC6 7 ASP B 13 ASP B 15 ASP B 173 PGA B 712 SITE 2 AC6 7 HOH B 716 HOH B 740 HOH B 924 CRYST1 48.591 88.447 48.591 90.00 97.26 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020580 0.000000 0.002623 0.00000 SCALE2 0.000000 0.011306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020746 0.00000