HEADER THIOESTERASE 19-APR-94 1THT TITLE STRUCTURE OF A MYRISTOYL-ACP-SPECIFIC THIOESTERASE FROM VIBRIO HARVEYI COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO HARVEYI; SOURCE 3 ORGANISM_TAXID: 669 KEYWDS THIOESTERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.LAWSON,U.DEREWENDA,L.SERRE,S.FERRI,R.SZITTER,Y.WEI,E.A.MEIGHEN, AUTHOR 2 Z.S.DEREWENDA REVDAT 4 14-FEB-24 1THT 1 SEQADV REVDAT 3 24-FEB-09 1THT 1 VERSN REVDAT 2 20-JUL-95 1THT 1 AUTHOR REVDAT 1 07-JUN-95 1THT 0 JRNL AUTH D.M.LAWSON,U.DEREWENDA,L.SERRE,S.FERRI,R.SZITTNER,Y.WEI, JRNL AUTH 2 E.A.MEIGHEN,Z.S.DEREWENDA JRNL TITL STRUCTURE OF A MYRISTOYL-ACP-SPECIFIC THIOESTERASE FROM JRNL TITL 2 VIBRIO HARVEYI. JRNL REF BIOCHEMISTRY V. 33 9382 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8068614 JRNL DOI 10.1021/BI00198A003 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 36771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4592 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.020 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.058 ; 0.058 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.077 ; 0.077 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.028 ; 0.028 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.137 ; 0.137 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.174 ; 0.174 REMARK 3 MULTIPLE TORSION (A) : 0.260 ; 0.260 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.116 ; 0.116 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 4.794 ; 4.794 REMARK 3 STAGGERED (DEGREES) : 18.324; 18.324 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.388 ; 3.388 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.124 ; 5.124 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.025 ; 4.025 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.024 ; 6.024 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1THT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.90000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THERE ARE TWO MOLECULES PER ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 GLY A 75 REMARK 465 LEU A 76 REMARK 465 SER A 77 REMARK 465 SER A 78 REMARK 465 GLY A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 ASP A 82 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 VAL B 74 REMARK 465 GLY B 75 REMARK 465 LEU B 76 REMARK 465 SER B 77 REMARK 465 SER B 78 REMARK 465 GLY B 79 REMARK 465 SER B 80 REMARK 465 ILE B 81 REMARK 465 ASP B 82 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 4 CG CD OE1 NE2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 14 CG1 CG2 REMARK 470 ARG A 46 CB CG CD NE CZ NH1 NH2 REMARK 470 ARG A 47 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 GLN B 4 CG CD OE1 NE2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLU B 83 CG CD OE1 OE2 REMARK 470 HIS B 170 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 209 CG OD1 ND2 REMARK 470 ASN B 210 CG OD1 ND2 REMARK 470 GLU B 217 CG CD OE1 OE2 REMARK 470 LYS B 294 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 10 NE2 HIS A 10 CD2 -0.070 REMARK 500 HIS A 21 NE2 HIS A 21 CD2 -0.071 REMARK 500 HIS A 64 NE2 HIS A 64 CD2 -0.078 REMARK 500 HIS A 72 NE2 HIS A 72 CD2 -0.071 REMARK 500 HIS A 230 NE2 HIS A 230 CD2 -0.067 REMARK 500 HIS B 10 NE2 HIS B 10 CD2 -0.076 REMARK 500 HIS B 21 NE2 HIS B 21 CD2 -0.072 REMARK 500 HIS B 50 NE2 HIS B 50 CD2 -0.068 REMARK 500 HIS B 64 NE2 HIS B 64 CD2 -0.080 REMARK 500 HIS B 72 NE2 HIS B 72 CD2 -0.070 REMARK 500 HIS B 184 NE2 HIS B 184 CD2 -0.075 REMARK 500 HIS B 230 NE2 HIS B 230 CD2 -0.068 REMARK 500 HIS B 241 NE2 HIS B 241 CD2 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 23 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP A 23 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 MET A 48 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 67 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 67 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 TRP A 99 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 99 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 GLU A 168 CA - C - N ANGL. DEV. = -26.2 DEGREES REMARK 500 GLU A 168 O - C - N ANGL. DEV. = 10.5 DEGREES REMARK 500 GLY A 169 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 TRP A 213 CD1 - CG - CD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 TRP A 213 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP A 213 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 251 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 251 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TYR A 254 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 CYS B 5 CA - CB - SG ANGL. DEV. = 13.3 DEGREES REMARK 500 TRP B 23 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP B 23 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 MET B 48 CG - SD - CE ANGL. DEV. = -16.7 DEGREES REMARK 500 ARG B 67 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 TRP B 99 CD1 - CG - CD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP B 99 CG - CD1 - NE1 ANGL. DEV. = -6.2 DEGREES REMARK 500 TRP B 99 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP B 99 CG - CD2 - CE3 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 142 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 LYS B 147 CA - CB - CG ANGL. DEV. = -19.9 DEGREES REMARK 500 TRP B 213 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP B 213 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 LEU B 237 CA - CB - CG ANGL. DEV. = 21.6 DEGREES REMARK 500 ARG B 251 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 292 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 6 62.11 -61.61 REMARK 500 ASN A 15 -0.45 -41.33 REMARK 500 PHE A 44 33.23 -89.29 REMARK 500 ASP A 69 -134.00 -105.48 REMARK 500 SER A 114 -120.20 51.73 REMARK 500 VAL A 136 50.85 34.51 REMARK 500 ASN A 210 52.11 -101.79 REMARK 500 ALA A 224 1.69 -69.36 REMARK 500 HIS A 230 61.34 -107.73 REMARK 500 SER A 240 -155.62 -108.51 REMARK 500 LYS B 6 19.42 -65.32 REMARK 500 ASN B 15 2.63 -52.53 REMARK 500 ASN B 30 53.51 -113.13 REMARK 500 ASP B 69 -136.40 -89.65 REMARK 500 SER B 114 -132.40 55.08 REMARK 500 PRO B 162 162.10 -46.20 REMARK 500 LEU B 237 -72.99 -42.18 REMARK 500 SER B 239 144.20 64.05 REMARK 500 SER B 240 -141.10 -102.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 168 12.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE STRANDS OF S2 IN *SHEET* RECORDS BELOW BOTH BELONG TO REMARK 700 THE CAP DOMAIN. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CAT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC TRIAD IN CHAIN A REMARK 800 REMARK 800 SITE_IDENTIFIER: CBT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC TRIAD IN CHAIN B DBREF 1THT A 1 305 UNP P05521 LUXD_VIBHA 1 305 DBREF 1THT B 1 305 UNP P05521 LUXD_VIBHA 1 305 SEQADV 1THT THR A 60 UNP P05521 GLU 60 CONFLICT SEQADV 1THT ASN A 299 UNP P05521 SER 299 CONFLICT SEQADV 1THT THR B 60 UNP P05521 GLU 60 CONFLICT SEQADV 1THT ASN B 299 UNP P05521 SER 299 CONFLICT SEQRES 1 A 305 MET ASN ASN GLN CYS LYS THR ILE ALA HIS VAL LEU ARG SEQRES 2 A 305 VAL ASN ASN GLY GLN GLU LEU HIS VAL TRP GLU THR PRO SEQRES 3 A 305 PRO LYS GLU ASN VAL PRO PHE LYS ASN ASN THR ILE LEU SEQRES 4 A 305 ILE ALA SER GLY PHE ALA ARG ARG MET ASP HIS PHE ALA SEQRES 5 A 305 GLY LEU ALA GLU TYR LEU SER THR ASN GLY PHE HIS VAL SEQRES 6 A 305 PHE ARG TYR ASP SER LEU HIS HIS VAL GLY LEU SER SER SEQRES 7 A 305 GLY SER ILE ASP GLU PHE THR MET THR THR GLY LYS ASN SEQRES 8 A 305 SER LEU CYS THR VAL TYR HIS TRP LEU GLN THR LYS GLY SEQRES 9 A 305 THR GLN ASN ILE GLY LEU ILE ALA ALA SER LEU SER ALA SEQRES 10 A 305 ARG VAL ALA TYR GLU VAL ILE SER ASP LEU GLU LEU SER SEQRES 11 A 305 PHE LEU ILE THR ALA VAL GLY VAL VAL ASN LEU ARG ASP SEQRES 12 A 305 THR LEU GLU LYS ALA LEU GLY PHE ASP TYR LEU SER LEU SEQRES 13 A 305 PRO ILE ASP GLU LEU PRO ASN ASP LEU ASP PHE GLU GLY SEQRES 14 A 305 HIS LYS LEU GLY SER GLU VAL PHE VAL ARG ASP CYS PHE SEQRES 15 A 305 GLU HIS HIS TRP ASP THR LEU ASP SER THR LEU ASP LYS SEQRES 16 A 305 VAL ALA ASN THR SER VAL PRO LEU ILE ALA PHE THR ALA SEQRES 17 A 305 ASN ASN ASP ASP TRP VAL LYS GLN GLU GLU VAL TYR ASP SEQRES 18 A 305 MET LEU ALA HIS ILE ARG THR GLY HIS CYS LYS LEU TYR SEQRES 19 A 305 SER LEU LEU GLY SER SER HIS ASP LEU GLY GLU ASN LEU SEQRES 20 A 305 VAL VAL LEU ARG ASN PHE TYR GLN SER VAL THR LYS ALA SEQRES 21 A 305 ALA ILE ALA MET ASP GLY GLY SER LEU GLU ILE ASP VAL SEQRES 22 A 305 ASP PHE ILE GLU PRO ASP PHE GLU GLN LEU THR ILE ALA SEQRES 23 A 305 THR VAL ASN GLU ARG ARG LEU LYS ALA GLU ILE GLU ASN SEQRES 24 A 305 ARG THR PRO GLU MET ALA SEQRES 1 B 305 MET ASN ASN GLN CYS LYS THR ILE ALA HIS VAL LEU ARG SEQRES 2 B 305 VAL ASN ASN GLY GLN GLU LEU HIS VAL TRP GLU THR PRO SEQRES 3 B 305 PRO LYS GLU ASN VAL PRO PHE LYS ASN ASN THR ILE LEU SEQRES 4 B 305 ILE ALA SER GLY PHE ALA ARG ARG MET ASP HIS PHE ALA SEQRES 5 B 305 GLY LEU ALA GLU TYR LEU SER THR ASN GLY PHE HIS VAL SEQRES 6 B 305 PHE ARG TYR ASP SER LEU HIS HIS VAL GLY LEU SER SER SEQRES 7 B 305 GLY SER ILE ASP GLU PHE THR MET THR THR GLY LYS ASN SEQRES 8 B 305 SER LEU CYS THR VAL TYR HIS TRP LEU GLN THR LYS GLY SEQRES 9 B 305 THR GLN ASN ILE GLY LEU ILE ALA ALA SER LEU SER ALA SEQRES 10 B 305 ARG VAL ALA TYR GLU VAL ILE SER ASP LEU GLU LEU SER SEQRES 11 B 305 PHE LEU ILE THR ALA VAL GLY VAL VAL ASN LEU ARG ASP SEQRES 12 B 305 THR LEU GLU LYS ALA LEU GLY PHE ASP TYR LEU SER LEU SEQRES 13 B 305 PRO ILE ASP GLU LEU PRO ASN ASP LEU ASP PHE GLU GLY SEQRES 14 B 305 HIS LYS LEU GLY SER GLU VAL PHE VAL ARG ASP CYS PHE SEQRES 15 B 305 GLU HIS HIS TRP ASP THR LEU ASP SER THR LEU ASP LYS SEQRES 16 B 305 VAL ALA ASN THR SER VAL PRO LEU ILE ALA PHE THR ALA SEQRES 17 B 305 ASN ASN ASP ASP TRP VAL LYS GLN GLU GLU VAL TYR ASP SEQRES 18 B 305 MET LEU ALA HIS ILE ARG THR GLY HIS CYS LYS LEU TYR SEQRES 19 B 305 SER LEU LEU GLY SER SER HIS ASP LEU GLY GLU ASN LEU SEQRES 20 B 305 VAL VAL LEU ARG ASN PHE TYR GLN SER VAL THR LYS ALA SEQRES 21 B 305 ALA ILE ALA MET ASP GLY GLY SER LEU GLU ILE ASP VAL SEQRES 22 B 305 ASP PHE ILE GLU PRO ASP PHE GLU GLN LEU THR ILE ALA SEQRES 23 B 305 THR VAL ASN GLU ARG ARG LEU LYS ALA GLU ILE GLU ASN SEQRES 24 B 305 ARG THR PRO GLU MET ALA FORMUL 3 HOH *55(H2 O) HELIX 1 AH1 ALA A 52 THR A 60 1 9 HELIX 2 AH2 MET A 86 THR A 102 1 17 HELIX 3 AH3 LEU A 115 VAL A 123 1 9 HELIX 4 AC1 LEU A 141 LEU A 149 1BELONGS TO THE CAP DOMAIN 9 HELIX 5 AC2 SER A 174 GLU A 183 1BELONGS TO THE CAP DOMAIN 10 HELIX 6 AH4 LEU A 189 VAL A 196 1 8 HELIX 7 AH5 GLN A 216 LEU A 223 1 8 HELIX 8 AH6 LEU A 247 ASP A 265 1 19 HELIX 9 AH7 PHE A 280 GLU A 296 1 17 HELIX 10 BH1 ALA B 52 THR B 60 1 9 HELIX 11 BH2 MET B 86 THR B 102 1 17 HELIX 12 BH3 LEU B 115 VAL B 123 1 9 HELIX 13 BC1 LEU B 141 LEU B 149 1BELONGS TO THE CAP DOMAIN 9 HELIX 14 BC2 SER B 174 GLU B 183 1BELONGS TO THE CAP DOMAIN 10 HELIX 15 BH4 LEU B 189 VAL B 196 1 8 HELIX 16 BH5 GLN B 216 LEU B 223 1 8 HELIX 17 BH6 LEU B 247 ASP B 265 1 19 HELIX 18 BH7 PHE B 280 GLU B 296 1 17 SHEET 1 S1A 9 ILE A 8 VAL A 14 0 SHEET 2 S1A 9 GLN A 18 THR A 25 -1 SHEET 3 S1A 9 THR A 37 ALA A 41 -1 SHEET 4 S1A 9 VAL A 65 TYR A 68 1 SHEET 5 S1A 9 ILE A 108 ALA A 113 1 SHEET 6 S1A 9 PHE A 131 ALA A 135 1 SHEET 7 S1A 9 LEU A 203 ALA A 208 1 SHEET 8 S1A 9 CYS A 231 LEU A 236 1 SHEET 9 S1A 9 PRO A 302 MET A 304 1 SHEET 1 S2A 2 ASP A 164 LEU A 165 0 SHEET 2 S2A 2 LEU A 172 GLY A 173 -1 SHEET 1 S1B 9 ILE B 8 VAL B 14 0 SHEET 2 S1B 9 GLN B 18 THR B 25 -1 SHEET 3 S1B 9 THR B 37 ALA B 41 -1 SHEET 4 S1B 9 VAL B 65 TYR B 68 1 SHEET 5 S1B 9 ILE B 108 ALA B 113 1 SHEET 6 S1B 9 PHE B 131 ALA B 135 1 SHEET 7 S1B 9 LEU B 203 ALA B 208 1 SHEET 8 S1B 9 CYS B 231 LEU B 236 1 SHEET 9 S1B 9 PRO B 302 MET B 304 1 SHEET 1 S2B 2 ASP B 164 LEU B 165 0 SHEET 2 S2B 2 LEU B 172 GLY B 173 -1 SITE 1 CAT 3 SER A 114 HIS A 241 ASP A 211 SITE 1 CBT 3 SER B 114 HIS B 241 ASP B 211 CRYST1 97.500 83.800 47.400 90.00 97.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010256 0.000000 0.001314 0.00000 SCALE2 0.000000 0.011933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021269 0.00000