data_1TSJ # _entry.id 1TSJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1TSJ RCSB RCSB022873 WWPDB D_1000022873 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-T1626 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TSJ _pdbx_database_status.recvd_initial_deposition_date 2004-06-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Min, T.' 1 ? 'Gorman, J.' 2 ? 'Shapiro, L.' 3 ? 'Burley, S.K.' 4 0000-0002-2487-9713 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 5 ? # _citation.id primary _citation.title 'The crystal structure of conserved hypothetical protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Min, T.' 1 ? primary 'Gorman, J.' 2 ? primary 'Shapiro, L.' 3 ? # _cell.entry_id 1TSJ _cell.length_a 83.847 _cell.length_b 83.847 _cell.length_c 36.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TSJ _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'conserved hypothetical protein' 15896.014 1 ? ? ? ? 2 water nat water 18.015 22 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MDIPKITTFL(MSE)FNNQAEEAVKLYTSLFEDSEIIT(MSE)AKYGENGPGDPGTVQHSIFTLNGQVF(MSE)AIDANS GTELPISLFVTVKDTIE(MSE)ERLFNGLKDEGAIL(MSE)PKTN(MSE)PPYREFAWVQDKFGVSFQLALPEEGGSHHH HHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTELPISLFVTV KDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPEEGGSHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-T1626 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ILE n 1 4 PRO n 1 5 LYS n 1 6 ILE n 1 7 THR n 1 8 THR n 1 9 PHE n 1 10 LEU n 1 11 MSE n 1 12 PHE n 1 13 ASN n 1 14 ASN n 1 15 GLN n 1 16 ALA n 1 17 GLU n 1 18 GLU n 1 19 ALA n 1 20 VAL n 1 21 LYS n 1 22 LEU n 1 23 TYR n 1 24 THR n 1 25 SER n 1 26 LEU n 1 27 PHE n 1 28 GLU n 1 29 ASP n 1 30 SER n 1 31 GLU n 1 32 ILE n 1 33 ILE n 1 34 THR n 1 35 MSE n 1 36 ALA n 1 37 LYS n 1 38 TYR n 1 39 GLY n 1 40 GLU n 1 41 ASN n 1 42 GLY n 1 43 PRO n 1 44 GLY n 1 45 ASP n 1 46 PRO n 1 47 GLY n 1 48 THR n 1 49 VAL n 1 50 GLN n 1 51 HIS n 1 52 SER n 1 53 ILE n 1 54 PHE n 1 55 THR n 1 56 LEU n 1 57 ASN n 1 58 GLY n 1 59 GLN n 1 60 VAL n 1 61 PHE n 1 62 MSE n 1 63 ALA n 1 64 ILE n 1 65 ASP n 1 66 ALA n 1 67 ASN n 1 68 SER n 1 69 GLY n 1 70 THR n 1 71 GLU n 1 72 LEU n 1 73 PRO n 1 74 ILE n 1 75 SER n 1 76 LEU n 1 77 PHE n 1 78 VAL n 1 79 THR n 1 80 VAL n 1 81 LYS n 1 82 ASP n 1 83 THR n 1 84 ILE n 1 85 GLU n 1 86 MSE n 1 87 GLU n 1 88 ARG n 1 89 LEU n 1 90 PHE n 1 91 ASN n 1 92 GLY n 1 93 LEU n 1 94 LYS n 1 95 ASP n 1 96 GLU n 1 97 GLY n 1 98 ALA n 1 99 ILE n 1 100 LEU n 1 101 MSE n 1 102 PRO n 1 103 LYS n 1 104 THR n 1 105 ASN n 1 106 MSE n 1 107 PRO n 1 108 PRO n 1 109 TYR n 1 110 ARG n 1 111 GLU n 1 112 PHE n 1 113 ALA n 1 114 TRP n 1 115 VAL n 1 116 GLN n 1 117 ASP n 1 118 LYS n 1 119 PHE n 1 120 GLY n 1 121 VAL n 1 122 SER n 1 123 PHE n 1 124 GLN n 1 125 LEU n 1 126 ALA n 1 127 LEU n 1 128 PRO n 1 129 GLU n 1 130 GLU n 1 131 GLY n 1 132 GLY n 1 133 SER n 1 134 HIS n 1 135 HIS n 1 136 HIS n 1 137 HIS n 1 138 HIS n 1 139 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Staphylococcus aureus' _entity_src_gen.gene_src_strain 'subsp. aureus' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus subsp. aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 46170 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'Modified PET26B' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8NX24_STAAW _struct_ref.pdbx_db_accession Q8NX24 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTELPMNPAISL FVTVKDTIEMERLFNGLKDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1TSJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8NX24 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 133 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1TSJ MSE A 11 ? UNP Q8NX24 MET 11 'modified residue' 11 1 1 1TSJ MSE A 35 ? UNP Q8NX24 MET 35 'modified residue' 35 2 1 1TSJ MSE A 62 ? UNP Q8NX24 MET 62 'modified residue' 62 3 1 1TSJ ? A ? ? UNP Q8NX24 MET 74 deletion ? 4 1 1TSJ ? A ? ? UNP Q8NX24 ASN 75 deletion ? 5 1 1TSJ ? A ? ? UNP Q8NX24 PRO 76 deletion ? 6 1 1TSJ ? A ? ? UNP Q8NX24 ALA 77 deletion ? 7 1 1TSJ MSE A 86 ? UNP Q8NX24 MET 90 'modified residue' 90 8 1 1TSJ MSE A 101 ? UNP Q8NX24 MET 105 'modified residue' 105 9 1 1TSJ MSE A 106 ? UNP Q8NX24 MET 110 'modified residue' 110 10 1 1TSJ GLU A 130 ? UNP Q8NX24 ? ? 'cloning artifact' 134 11 1 1TSJ GLY A 131 ? UNP Q8NX24 ? ? 'cloning artifact' 135 12 1 1TSJ GLY A 132 ? UNP Q8NX24 ? ? 'cloning artifact' 136 13 1 1TSJ SER A 133 ? UNP Q8NX24 ? ? 'cloning artifact' 137 14 1 1TSJ HIS A 134 ? UNP Q8NX24 ? ? 'expression tag' 138 15 1 1TSJ HIS A 135 ? UNP Q8NX24 ? ? 'expression tag' 139 16 1 1TSJ HIS A 136 ? UNP Q8NX24 ? ? 'expression tag' 140 17 1 1TSJ HIS A 137 ? UNP Q8NX24 ? ? 'expression tag' 141 18 1 1TSJ HIS A 134 ? UNP Q8NX24 ? ? 'expression tag' 138 19 1 1TSJ HIS A 135 ? UNP Q8NX24 ? ? 'expression tag' 139 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1TSJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_percent_sol 56.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '32% PEG4K, 0.1M Na Acetate pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-02-21 _diffrn_detector.details 'Vertical and Horizontal focusing Mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Diamond _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 1TSJ _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 70 _reflns.number_all 5871 _reflns.number_obs 5836 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 20 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1TSJ _refine.ls_number_reflns_obs 4422 _refine.ls_number_reflns_all 4635 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.19265 _refine.ls_R_factor_all 0.19265 _refine.ls_R_factor_R_work 0.18905 _refine.ls_R_factor_R_free 0.26377 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 213 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.888 _refine.B_iso_mean 30.518 _refine.aniso_B[1][1] -0.64 _refine.aniso_B[2][2] -0.64 _refine.aniso_B[3][3] 0.96 _refine.aniso_B[1][2] -0.32 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.319 _refine.overall_SU_ML 0.207 _refine.overall_SU_B 22.019 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 902 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 924 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.050 0.022 ? 922 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 838 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.899 1.946 ? 1246 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.252 3.000 ? 1947 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.787 5.000 ? 113 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45.967 25.526 ? 38 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.195 15.000 ? 151 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.741 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.157 0.200 ? 142 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1003 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 181 'X-RAY DIFFRACTION' ? r_nbd_refined 0.257 0.200 ? 215 'X-RAY DIFFRACTION' ? r_nbd_other 0.235 0.200 ? 896 'X-RAY DIFFRACTION' ? r_nbtor_other 0.118 0.200 ? 641 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.179 0.200 ? 31 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.054 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.147 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.173 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.193 0.200 ? 2 'X-RAY DIFFRACTION' ? r_mcbond_it 2.942 1.500 ? 603 'X-RAY DIFFRACTION' ? r_mcbond_other 0.657 1.500 ? 235 'X-RAY DIFFRACTION' ? r_mcangle_it 3.760 2.000 ? 932 'X-RAY DIFFRACTION' ? r_scbond_it 5.123 3.000 ? 375 'X-RAY DIFFRACTION' ? r_scangle_it 7.289 4.500 ? 314 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3.416 3.000 ? 1951 'X-RAY DIFFRACTION' ? r_sphericity_free 15.790 3.000 ? 22 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3.207 3.000 ? 1740 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low ? _refine_ls_shell.number_reflns_R_work 317 _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1TSJ _struct.title 'Crystal structure of protein from Staphylococcus aureus' _struct.pdbx_descriptor 'conserved hypothetical protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TSJ _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;conserved hypothetical protein, Structural Genomics, Protein Structure Initiative, PSI, NYSGXRC, New York SGX Research Center for Structural Genomics, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 15 ? PHE A 27 ? GLN A 15 PHE A 27 1 ? 13 HELX_P HELX_P2 2 ASP A 82 ? ASP A 95 ? ASP A 86 ASP A 99 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 10 C ? ? ? 1_555 A MSE 11 N ? ? A LEU 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.306 ? ? covale2 covale both ? A MSE 11 C ? ? ? 1_555 A PHE 12 N ? ? A MSE 11 A PHE 12 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A THR 34 C ? ? ? 1_555 A MSE 35 N ? ? A THR 34 A MSE 35 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 35 C ? ? ? 1_555 A ALA 36 N ? ? A MSE 35 A ALA 36 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A PHE 61 C ? ? ? 1_555 A MSE 62 N ? ? A PHE 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.293 ? ? covale6 covale both ? A MSE 62 C ? ? ? 1_555 A ALA 63 N ? ? A MSE 62 A ALA 63 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A GLU 85 C ? ? ? 1_555 A MSE 86 N ? ? A GLU 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale8 covale both ? A MSE 86 C ? ? ? 1_555 A GLU 87 N ? ? A MSE 90 A GLU 91 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale9 covale both ? A LEU 100 C ? ? ? 1_555 A MSE 101 N ? ? A LEU 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale10 covale both ? A MSE 101 C ? ? ? 1_555 A PRO 102 N ? ? A MSE 105 A PRO 106 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? A ASN 105 C ? ? ? 1_555 A MSE 106 N ? ? A ASN 109 A MSE 110 1_555 ? ? ? ? ? ? ? 1.293 ? ? covale12 covale both ? A MSE 106 C ? ? ? 1_555 A PRO 107 N ? ? A MSE 110 A PRO 111 1_555 ? ? ? ? ? ? ? 1.335 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 107 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 111 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 108 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 112 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -13.07 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 31 ? LYS A 37 ? GLU A 31 LYS A 37 A 2 VAL A 49 ? LEU A 56 ? VAL A 49 LEU A 56 A 3 GLN A 59 ? ILE A 64 ? GLN A 59 ILE A 64 A 4 ILE A 6 ? MSE A 11 ? ILE A 6 MSE A 11 A 5 LEU A 76 ? THR A 79 ? LEU A 80 THR A 83 A 6 SER A 122 ? LEU A 127 ? SER A 126 LEU A 131 A 7 TYR A 109 ? GLN A 116 ? TYR A 113 GLN A 120 A 8 ALA A 98 ? MSE A 106 ? ALA A 102 MSE A 110 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 36 ? N ALA A 36 O GLN A 50 ? O GLN A 50 A 2 3 N PHE A 54 ? N PHE A 54 O PHE A 61 ? O PHE A 61 A 3 4 O MSE A 62 ? O MSE A 62 N LEU A 10 ? N LEU A 10 A 4 5 N THR A 7 ? N THR A 7 O PHE A 77 ? O PHE A 81 A 5 6 N VAL A 78 ? N VAL A 82 O GLN A 124 ? O GLN A 128 A 6 7 O LEU A 127 ? O LEU A 131 N GLU A 111 ? N GLU A 115 A 7 8 O TRP A 114 ? O TRP A 118 N MSE A 101 ? N MSE A 105 # _database_PDB_matrix.entry_id 1TSJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TSJ _atom_sites.fract_transf_matrix[1][1] 0.011926 _atom_sites.fract_transf_matrix[1][2] 0.006886 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013772 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027382 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 MSE 11 11 11 MSE MSE A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 MSE 35 35 35 MSE MSE A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLU 40 40 ? ? ? A . n A 1 41 ASN 41 41 ? ? ? A . n A 1 42 GLY 42 42 ? ? ? A . n A 1 43 PRO 43 43 ? ? ? A . n A 1 44 GLY 44 44 ? ? ? A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 MSE 62 62 62 MSE MSE A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 ALA 66 70 ? ? ? A . n A 1 67 ASN 67 71 ? ? ? A . n A 1 68 SER 68 72 ? ? ? A . n A 1 69 GLY 69 73 ? ? ? A . n A 1 70 THR 70 74 ? ? ? A . n A 1 71 GLU 71 75 ? ? ? A . n A 1 72 LEU 72 76 ? ? ? A . n A 1 73 PRO 73 77 77 PRO PRO A . n A 1 74 ILE 74 78 78 ILE ILE A . n A 1 75 SER 75 79 79 SER SER A . n A 1 76 LEU 76 80 80 LEU LEU A . n A 1 77 PHE 77 81 81 PHE PHE A . n A 1 78 VAL 78 82 82 VAL VAL A . n A 1 79 THR 79 83 83 THR THR A . n A 1 80 VAL 80 84 84 VAL VAL A . n A 1 81 LYS 81 85 85 LYS LYS A . n A 1 82 ASP 82 86 86 ASP ASP A . n A 1 83 THR 83 87 87 THR THR A . n A 1 84 ILE 84 88 88 ILE ILE A . n A 1 85 GLU 85 89 89 GLU GLU A . n A 1 86 MSE 86 90 90 MSE MSE A . n A 1 87 GLU 87 91 91 GLU GLU A . n A 1 88 ARG 88 92 92 ARG ARG A . n A 1 89 LEU 89 93 93 LEU LEU A . n A 1 90 PHE 90 94 94 PHE PHE A . n A 1 91 ASN 91 95 95 ASN ASN A . n A 1 92 GLY 92 96 96 GLY GLY A . n A 1 93 LEU 93 97 97 LEU LEU A . n A 1 94 LYS 94 98 98 LYS LYS A . n A 1 95 ASP 95 99 99 ASP ASP A . n A 1 96 GLU 96 100 100 GLU GLU A . n A 1 97 GLY 97 101 101 GLY GLY A . n A 1 98 ALA 98 102 102 ALA ALA A . n A 1 99 ILE 99 103 103 ILE ILE A . n A 1 100 LEU 100 104 104 LEU LEU A . n A 1 101 MSE 101 105 105 MSE MSE A . n A 1 102 PRO 102 106 106 PRO PRO A . n A 1 103 LYS 103 107 107 LYS LYS A . n A 1 104 THR 104 108 108 THR THR A . n A 1 105 ASN 105 109 109 ASN ASN A . n A 1 106 MSE 106 110 110 MSE MSE A . n A 1 107 PRO 107 111 111 PRO PRO A . n A 1 108 PRO 108 112 112 PRO PRO A . n A 1 109 TYR 109 113 113 TYR TYR A . n A 1 110 ARG 110 114 114 ARG ARG A . n A 1 111 GLU 111 115 115 GLU GLU A . n A 1 112 PHE 112 116 116 PHE PHE A . n A 1 113 ALA 113 117 117 ALA ALA A . n A 1 114 TRP 114 118 118 TRP TRP A . n A 1 115 VAL 115 119 119 VAL VAL A . n A 1 116 GLN 116 120 120 GLN GLN A . n A 1 117 ASP 117 121 121 ASP ASP A . n A 1 118 LYS 118 122 122 LYS LYS A . n A 1 119 PHE 119 123 123 PHE PHE A . n A 1 120 GLY 120 124 124 GLY GLY A . n A 1 121 VAL 121 125 125 VAL VAL A . n A 1 122 SER 122 126 126 SER SER A . n A 1 123 PHE 123 127 127 PHE PHE A . n A 1 124 GLN 124 128 128 GLN GLN A . n A 1 125 LEU 125 129 129 LEU LEU A . n A 1 126 ALA 126 130 130 ALA ALA A . n A 1 127 LEU 127 131 131 LEU LEU A . n A 1 128 PRO 128 132 132 PRO PRO A . n A 1 129 GLU 129 133 133 GLU GLU A . n A 1 130 GLU 130 134 ? ? ? A . n A 1 131 GLY 131 135 ? ? ? A . n A 1 132 GLY 132 136 ? ? ? A . n A 1 133 SER 133 137 ? ? ? A . n A 1 134 HIS 134 138 ? ? ? A . n A 1 135 HIS 135 139 ? ? ? A . n A 1 136 HIS 136 140 ? ? ? A . n A 1 137 HIS 137 141 ? ? ? A . n A 1 138 HIS 138 142 ? ? ? A . n A 1 139 HIS 139 143 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 144 1 HOH HOH A . B 2 HOH 2 145 2 HOH HOH A . B 2 HOH 3 146 3 HOH HOH A . B 2 HOH 4 147 4 HOH HOH A . B 2 HOH 5 148 5 HOH HOH A . B 2 HOH 6 149 6 HOH HOH A . B 2 HOH 7 150 7 HOH HOH A . B 2 HOH 8 151 8 HOH HOH A . B 2 HOH 9 152 9 HOH HOH A . B 2 HOH 10 153 10 HOH HOH A . B 2 HOH 11 154 11 HOH HOH A . B 2 HOH 12 155 12 HOH HOH A . B 2 HOH 13 156 13 HOH HOH A . B 2 HOH 14 157 14 HOH HOH A . B 2 HOH 15 158 15 HOH HOH A . B 2 HOH 16 159 16 HOH HOH A . B 2 HOH 17 160 17 HOH HOH A . B 2 HOH 18 161 18 HOH HOH A . B 2 HOH 19 162 19 HOH HOH A . B 2 HOH 20 163 20 HOH HOH A . B 2 HOH 21 164 21 HOH HOH A . B 2 HOH 22 165 22 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 11 A MSE 11 ? MET SELENOMETHIONINE 2 A MSE 35 A MSE 35 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 62 ? MET SELENOMETHIONINE 4 A MSE 86 A MSE 90 ? MET SELENOMETHIONINE 5 A MSE 101 A MSE 105 ? MET SELENOMETHIONINE 6 A MSE 106 A MSE 110 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2510 ? 2 MORE -26 ? 2 'SSA (A^2)' 11230 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 83.8470000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-12-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' pdbx_database_related 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_pdbx_database_related.db_name' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.9999 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 18 ? ? OE1 A GLU 18 ? ? 1.371 1.252 0.119 0.011 N 2 1 CD A GLU 18 ? ? OE2 A GLU 18 ? ? 1.346 1.252 0.094 0.011 N 3 1 CD A GLU 28 ? ? OE2 A GLU 28 ? ? 1.332 1.252 0.080 0.011 N 4 1 CG A TYR 38 ? ? CD2 A TYR 38 ? ? 1.466 1.387 0.079 0.013 N 5 1 CD1 A TYR 38 ? ? CE1 A TYR 38 ? ? 1.278 1.389 -0.111 0.015 N 6 1 CD A GLU 91 ? ? OE1 A GLU 91 ? ? 1.351 1.252 0.099 0.011 N 7 1 SE A MSE 110 ? ? CE A MSE 110 ? ? 2.452 1.950 0.502 0.059 N 8 1 CD A GLU 115 ? ? OE1 A GLU 115 ? ? 1.327 1.252 0.075 0.011 N 9 1 CE3 A TRP 118 ? ? CZ3 A TRP 118 ? ? 1.498 1.380 0.118 0.017 N 10 1 CB A PHE 123 ? ? CG A PHE 123 ? ? 1.395 1.509 -0.114 0.017 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 121 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 121 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 121 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.38 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 7.08 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 13 ? ? -71.32 -75.84 2 1 GLU A 28 ? ? -74.97 -86.44 3 1 GLU A 31 ? ? -170.25 139.64 4 1 ILE A 78 ? ? -145.04 42.52 5 1 SER A 79 ? ? -46.85 -179.87 6 1 GLU A 100 ? ? 45.61 25.17 7 1 PRO A 112 ? ? -71.11 22.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 5 ? CG ? A LYS 5 CG 2 1 Y 1 A LYS 5 ? CD ? A LYS 5 CD 3 1 Y 1 A LYS 5 ? CE ? A LYS 5 CE 4 1 Y 1 A LYS 5 ? NZ ? A LYS 5 NZ 5 1 Y 1 A ASP 65 ? CG ? A ASP 65 CG 6 1 Y 1 A ASP 65 ? OD1 ? A ASP 65 OD1 7 1 Y 1 A ASP 65 ? OD2 ? A ASP 65 OD2 8 1 Y 1 A LYS 85 ? CG ? A LYS 81 CG 9 1 Y 1 A LYS 85 ? CD ? A LYS 81 CD 10 1 Y 1 A LYS 85 ? CE ? A LYS 81 CE 11 1 Y 1 A LYS 85 ? NZ ? A LYS 81 NZ 12 1 Y 1 A THR 87 ? CB ? A THR 83 CB 13 1 Y 1 A THR 87 ? OG1 ? A THR 83 OG1 14 1 Y 1 A THR 87 ? CG2 ? A THR 83 CG2 15 1 Y 1 A GLU 89 ? CB ? A GLU 85 CB 16 1 Y 1 A GLU 89 ? CG ? A GLU 85 CG 17 1 Y 1 A GLU 89 ? CD ? A GLU 85 CD 18 1 Y 1 A GLU 89 ? OE1 ? A GLU 85 OE1 19 1 Y 1 A GLU 89 ? OE2 ? A GLU 85 OE2 20 1 Y 1 A GLU 100 ? CG ? A GLU 96 CG 21 1 Y 1 A GLU 100 ? CD ? A GLU 96 CD 22 1 Y 1 A GLU 100 ? OE1 ? A GLU 96 OE1 23 1 Y 1 A GLU 100 ? OE2 ? A GLU 96 OE2 24 1 Y 1 A ARG 114 ? CD ? A ARG 110 CD 25 1 Y 1 A ARG 114 ? NE ? A ARG 110 NE 26 1 Y 1 A ARG 114 ? CZ ? A ARG 110 CZ 27 1 Y 1 A ARG 114 ? NH1 ? A ARG 110 NH1 28 1 Y 1 A ARG 114 ? NH2 ? A ARG 110 NH2 29 1 Y 1 A GLU 133 ? CB ? A GLU 129 CB 30 1 Y 1 A GLU 133 ? CG ? A GLU 129 CG 31 1 Y 1 A GLU 133 ? CD ? A GLU 129 CD 32 1 Y 1 A GLU 133 ? OE1 ? A GLU 129 OE1 33 1 Y 1 A GLU 133 ? OE2 ? A GLU 129 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 40 ? A GLU 40 2 1 Y 1 A ASN 41 ? A ASN 41 3 1 Y 1 A GLY 42 ? A GLY 42 4 1 Y 1 A PRO 43 ? A PRO 43 5 1 Y 1 A GLY 44 ? A GLY 44 6 1 Y 1 A ALA 70 ? A ALA 66 7 1 Y 1 A ASN 71 ? A ASN 67 8 1 Y 1 A SER 72 ? A SER 68 9 1 Y 1 A GLY 73 ? A GLY 69 10 1 Y 1 A THR 74 ? A THR 70 11 1 Y 1 A GLU 75 ? A GLU 71 12 1 Y 1 A LEU 76 ? A LEU 72 13 1 Y 1 A GLU 134 ? A GLU 130 14 1 Y 1 A GLY 135 ? A GLY 131 15 1 Y 1 A GLY 136 ? A GLY 132 16 1 Y 1 A SER 137 ? A SER 133 17 1 Y 1 A HIS 138 ? A HIS 134 18 1 Y 1 A HIS 139 ? A HIS 135 19 1 Y 1 A HIS 140 ? A HIS 136 20 1 Y 1 A HIS 141 ? A HIS 137 21 1 Y 1 A HIS 142 ? A HIS 138 22 1 Y 1 A HIS 143 ? A HIS 139 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #