data_1TTY # _entry.id 1TTY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1TTY pdb_00001tty 10.2210/pdb1tty/pdb RCSB RCSB022898 ? ? WWPDB D_1000022898 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TTY _pdbx_database_status.recvd_initial_deposition_date 2004-06-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lambert, L.J.' 1 'Wei, Y.' 2 'Schirf, V.' 3 'Demeler, B.' 4 'Werner, M.H.' 5 # _citation.id primary _citation.title 'T4 AsiA blocks DNA recognition by remodeling sigma(70) region 4' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 23 _citation.page_first 2952 _citation.page_last 2962 _citation.year 2004 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15257291 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7600312 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lambert, L.J.' 1 ? primary 'Wei, Y.' 2 ? primary 'Schirf, V.' 3 ? primary 'Demeler, B.' 4 ? primary 'Werner, M.H.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA polymerase sigma factor rpoD' _entity.formula_weight 10384.335 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Sigma-A # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLS LMDENEG ; _entity_poly.pdbx_seq_one_letter_code_can ;KEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLS LMDENEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLU n 1 3 ALA n 1 4 MET n 1 5 ARG n 1 6 MET n 1 7 LEU n 1 8 MET n 1 9 ARG n 1 10 GLU n 1 11 GLU n 1 12 LEU n 1 13 GLU n 1 14 LYS n 1 15 VAL n 1 16 LEU n 1 17 LYS n 1 18 THR n 1 19 LEU n 1 20 SER n 1 21 PRO n 1 22 ARG n 1 23 GLU n 1 24 ALA n 1 25 MET n 1 26 VAL n 1 27 LEU n 1 28 ARG n 1 29 MET n 1 30 ARG n 1 31 TYR n 1 32 GLY n 1 33 LEU n 1 34 LEU n 1 35 ASP n 1 36 GLY n 1 37 LYS n 1 38 PRO n 1 39 LYS n 1 40 THR n 1 41 LEU n 1 42 GLU n 1 43 GLU n 1 44 VAL n 1 45 GLY n 1 46 GLN n 1 47 TYR n 1 48 PHE n 1 49 ASN n 1 50 VAL n 1 51 THR n 1 52 ARG n 1 53 GLU n 1 54 ARG n 1 55 ILE n 1 56 ARG n 1 57 GLN n 1 58 ILE n 1 59 GLU n 1 60 VAL n 1 61 LYS n 1 62 ALA n 1 63 LEU n 1 64 ARG n 1 65 LYS n 1 66 LEU n 1 67 ARG n 1 68 HIS n 1 69 PRO n 1 70 SER n 1 71 ARG n 1 72 SER n 1 73 LYS n 1 74 TYR n 1 75 LEU n 1 76 LYS n 1 77 SER n 1 78 LEU n 1 79 LEU n 1 80 SER n 1 81 LEU n 1 82 MET n 1 83 ASP n 1 84 GLU n 1 85 ASN n 1 86 GLU n 1 87 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene 'RPOD, SIGA, TM1451' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-SI _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-30b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RPOD_THEMA _struct_ref.pdbx_db_accession P77994 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLS LMDENEG ; _struct_ref.pdbx_align_begin 313 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1TTY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 87 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P77994 _struct_ref_seq.db_align_beg 313 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 399 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 313 _struct_ref_seq.pdbx_auth_seq_align_end 399 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY 3 1 1 HNHA # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '150 mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents 'phosphate buffered saline, pH 7.0, 1 mM protein' _pdbx_nmr_sample_details.solvent_system '96% H2O, 4% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DMX 500 2 ? Bruker DMX 600 3 ? Bruker AVANCE 800 # _pdbx_nmr_refine.entry_id 1TTY _pdbx_nmr_refine.method 'simulated annealing in torsion angle space' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1TTY _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 22 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1TTY _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Xplor-NIH 2.9.3 'structure solution' 'Clore and Schweiters' 1 NMRPipe 2.2 'data analysis' Delaglio 2 Xplor-NIH 2.9.3 refinement 'Clore and Schweiters' 3 # _exptl.entry_id 1TTY _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1TTY _struct.title 'Solution structure of sigma A region 4 from Thermotoga maritima' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TTY _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'sigma factor, rna polymerase, helix-turn-helix, TRANSCRIPTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 10 ? LYS A 17 ? GLU A 322 LYS A 329 1 ? 8 HELX_P HELX_P2 2 SER A 20 ? GLY A 32 ? SER A 332 GLY A 344 1 ? 13 HELX_P HELX_P3 3 THR A 40 ? PHE A 48 ? THR A 352 PHE A 360 1 ? 9 HELX_P HELX_P4 4 THR A 51 ? ARG A 67 ? THR A 363 ARG A 379 1 ? 17 HELX_P HELX_P5 5 SER A 72 ? MET A 82 ? SER A 384 MET A 394 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1TTY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TTY _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 313 313 LYS LYS A . n A 1 2 GLU 2 314 314 GLU GLU A . n A 1 3 ALA 3 315 315 ALA ALA A . n A 1 4 MET 4 316 316 MET MET A . n A 1 5 ARG 5 317 317 ARG ARG A . n A 1 6 MET 6 318 318 MET MET A . n A 1 7 LEU 7 319 319 LEU LEU A . n A 1 8 MET 8 320 320 MET MET A . n A 1 9 ARG 9 321 321 ARG ARG A . n A 1 10 GLU 10 322 322 GLU GLU A . n A 1 11 GLU 11 323 323 GLU GLU A . n A 1 12 LEU 12 324 324 LEU LEU A . n A 1 13 GLU 13 325 325 GLU GLU A . n A 1 14 LYS 14 326 326 LYS LYS A . n A 1 15 VAL 15 327 327 VAL VAL A . n A 1 16 LEU 16 328 328 LEU LEU A . n A 1 17 LYS 17 329 329 LYS LYS A . n A 1 18 THR 18 330 330 THR THR A . n A 1 19 LEU 19 331 331 LEU LEU A . n A 1 20 SER 20 332 332 SER SER A . n A 1 21 PRO 21 333 333 PRO PRO A . n A 1 22 ARG 22 334 334 ARG ARG A . n A 1 23 GLU 23 335 335 GLU GLU A . n A 1 24 ALA 24 336 336 ALA ALA A . n A 1 25 MET 25 337 337 MET MET A . n A 1 26 VAL 26 338 338 VAL VAL A . n A 1 27 LEU 27 339 339 LEU LEU A . n A 1 28 ARG 28 340 340 ARG ARG A . n A 1 29 MET 29 341 341 MET MET A . n A 1 30 ARG 30 342 342 ARG ARG A . n A 1 31 TYR 31 343 343 TYR TYR A . n A 1 32 GLY 32 344 344 GLY GLY A . n A 1 33 LEU 33 345 345 LEU LEU A . n A 1 34 LEU 34 346 346 LEU LEU A . n A 1 35 ASP 35 347 347 ASP ASP A . n A 1 36 GLY 36 348 348 GLY GLY A . n A 1 37 LYS 37 349 349 LYS LYS A . n A 1 38 PRO 38 350 350 PRO PRO A . n A 1 39 LYS 39 351 351 LYS LYS A . n A 1 40 THR 40 352 352 THR THR A . n A 1 41 LEU 41 353 353 LEU LEU A . n A 1 42 GLU 42 354 354 GLU GLU A . n A 1 43 GLU 43 355 355 GLU GLU A . n A 1 44 VAL 44 356 356 VAL VAL A . n A 1 45 GLY 45 357 357 GLY GLY A . n A 1 46 GLN 46 358 358 GLN GLN A . n A 1 47 TYR 47 359 359 TYR TYR A . n A 1 48 PHE 48 360 360 PHE PHE A . n A 1 49 ASN 49 361 361 ASN ASN A . n A 1 50 VAL 50 362 362 VAL VAL A . n A 1 51 THR 51 363 363 THR THR A . n A 1 52 ARG 52 364 364 ARG ARG A . n A 1 53 GLU 53 365 365 GLU GLU A . n A 1 54 ARG 54 366 366 ARG ARG A . n A 1 55 ILE 55 367 367 ILE ILE A . n A 1 56 ARG 56 368 368 ARG ARG A . n A 1 57 GLN 57 369 369 GLN GLN A . n A 1 58 ILE 58 370 370 ILE ILE A . n A 1 59 GLU 59 371 371 GLU GLU A . n A 1 60 VAL 60 372 372 VAL VAL A . n A 1 61 LYS 61 373 373 LYS LYS A . n A 1 62 ALA 62 374 374 ALA ALA A . n A 1 63 LEU 63 375 375 LEU LEU A . n A 1 64 ARG 64 376 376 ARG ARG A . n A 1 65 LYS 65 377 377 LYS LYS A . n A 1 66 LEU 66 378 378 LEU LEU A . n A 1 67 ARG 67 379 379 ARG ARG A . n A 1 68 HIS 68 380 380 HIS HIS A . n A 1 69 PRO 69 381 381 PRO PRO A . n A 1 70 SER 70 382 382 SER SER A . n A 1 71 ARG 71 383 383 ARG ARG A . n A 1 72 SER 72 384 384 SER SER A . n A 1 73 LYS 73 385 385 LYS LYS A . n A 1 74 TYR 74 386 386 TYR TYR A . n A 1 75 LEU 75 387 387 LEU LEU A . n A 1 76 LYS 76 388 388 LYS LYS A . n A 1 77 SER 77 389 389 SER SER A . n A 1 78 LEU 78 390 390 LEU LEU A . n A 1 79 LEU 79 391 391 LEU LEU A . n A 1 80 SER 80 392 392 SER SER A . n A 1 81 LEU 81 393 393 LEU LEU A . n A 1 82 MET 82 394 394 MET MET A . n A 1 83 ASP 83 395 395 ASP ASP A . n A 1 84 GLU 84 396 396 GLU GLU A . n A 1 85 ASN 85 397 397 ASN ASN A . n A 1 86 GLU 86 398 398 GLU GLU A . n A 1 87 GLY 87 399 399 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-23 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_spectrometer 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A LYS 373 ? ? H A LYS 377 ? ? 1.59 2 6 O A SER 389 ? ? HG A SER 392 ? ? 1.59 3 6 O A LYS 349 ? ? HZ2 A LYS 351 ? ? 1.59 4 7 O A LYS 373 ? ? H A LYS 377 ? ? 1.59 5 10 O A VAL 327 ? ? HG1 A THR 330 ? ? 1.58 6 13 O A LYS 373 ? ? H A LYS 377 ? ? 1.60 7 16 O A LYS 373 ? ? H A LYS 377 ? ? 1.58 8 19 O A LYS 373 ? ? H A LYS 377 ? ? 1.59 9 21 O A LYS 373 ? ? H A LYS 377 ? ? 1.59 10 22 O A GLU 322 ? ? H A LYS 326 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 317 ? ? -155.63 -74.71 2 1 MET A 320 ? ? 176.71 143.23 3 1 ARG A 321 ? ? -157.16 40.23 4 1 GLU A 322 ? ? -91.25 -65.13 5 1 PHE A 360 ? ? -90.64 -91.30 6 1 ASN A 361 ? ? -173.68 27.45 7 1 ARG A 379 ? ? -69.77 66.27 8 1 HIS A 380 ? ? -179.53 -64.67 9 1 SER A 384 ? ? 179.05 43.28 10 1 ASP A 395 ? ? -84.74 30.62 11 2 ARG A 317 ? ? -96.11 -67.80 12 2 MET A 320 ? ? 61.93 -78.21 13 2 GLU A 322 ? ? -98.70 -63.64 14 2 PHE A 360 ? ? -90.47 -92.01 15 2 ASN A 361 ? ? -177.35 29.11 16 2 ARG A 379 ? ? 43.75 71.55 17 2 HIS A 380 ? ? -166.05 78.07 18 2 PRO A 381 ? ? -51.35 102.03 19 2 SER A 382 ? ? -179.88 -50.45 20 2 SER A 384 ? ? -150.21 55.68 21 2 MET A 394 ? ? -162.11 -80.95 22 2 ASP A 395 ? ? -162.61 41.56 23 2 ASN A 397 ? ? -149.57 31.20 24 2 GLU A 398 ? ? -162.76 -48.96 25 3 MET A 318 ? ? 175.19 167.81 26 3 GLU A 322 ? ? -97.23 -63.91 27 3 PHE A 360 ? ? -91.61 -88.40 28 3 ASN A 361 ? ? -175.01 30.39 29 3 SER A 382 ? ? 179.13 -80.74 30 3 MET A 394 ? ? -91.11 -81.60 31 3 ASP A 395 ? ? -163.23 22.82 32 3 ASN A 397 ? ? -149.96 -54.81 33 4 MET A 318 ? ? 60.91 122.61 34 4 LEU A 319 ? ? -178.10 37.58 35 4 ARG A 321 ? ? 58.85 104.87 36 4 GLU A 322 ? ? -96.45 -61.76 37 4 PHE A 360 ? ? -93.57 -92.66 38 4 ASN A 361 ? ? -178.53 31.95 39 4 HIS A 380 ? ? -179.97 -66.19 40 4 SER A 384 ? ? 178.74 60.63 41 5 ALA A 315 ? ? -179.10 93.66 42 5 ARG A 317 ? ? -176.34 112.67 43 5 ARG A 321 ? ? 50.45 -176.81 44 5 GLU A 322 ? ? -97.02 -65.15 45 5 PHE A 360 ? ? -91.75 -88.73 46 5 ASN A 361 ? ? -174.37 30.02 47 5 HIS A 380 ? ? -179.70 -59.61 48 5 MET A 394 ? ? -86.94 -71.43 49 5 ASP A 395 ? ? -159.64 23.61 50 5 ASN A 397 ? ? -151.96 -54.97 51 6 ARG A 317 ? ? -140.58 30.01 52 6 MET A 318 ? ? -110.75 74.70 53 6 MET A 320 ? ? -132.09 -80.33 54 6 PHE A 360 ? ? -91.14 -89.57 55 6 ASN A 361 ? ? -174.63 28.85 56 6 MET A 394 ? ? -158.22 -9.27 57 7 ALA A 315 ? ? -166.31 -52.33 58 7 MET A 316 ? ? 66.19 -70.67 59 7 MET A 318 ? ? 61.27 151.57 60 7 ARG A 321 ? ? 49.57 94.82 61 7 PHE A 360 ? ? -90.69 -91.79 62 7 ASN A 361 ? ? -176.83 29.00 63 7 PRO A 381 ? ? -48.55 97.33 64 7 SER A 382 ? ? -167.26 -73.53 65 7 MET A 394 ? ? -158.59 23.85 66 7 ASP A 395 ? ? -154.57 17.69 67 7 GLU A 396 ? ? -159.98 79.26 68 7 ASN A 397 ? ? -90.19 -70.97 69 7 GLU A 398 ? ? -163.12 34.84 70 8 MET A 316 ? ? -157.51 28.94 71 8 MET A 318 ? ? 49.80 -175.75 72 8 LEU A 319 ? ? 61.59 83.39 73 8 MET A 320 ? ? -103.78 -78.05 74 8 ARG A 321 ? ? 54.56 101.27 75 8 GLU A 322 ? ? -96.39 -63.21 76 8 PHE A 360 ? ? -91.27 -92.07 77 8 ASN A 361 ? ? -177.52 30.35 78 8 SER A 382 ? ? -66.35 -78.49 79 8 MET A 394 ? ? -87.78 -72.77 80 8 ASP A 395 ? ? -160.16 23.70 81 9 ALA A 315 ? ? 63.65 -79.82 82 9 LEU A 319 ? ? 63.63 148.50 83 9 MET A 320 ? ? 62.35 141.63 84 9 PHE A 360 ? ? -93.09 -92.11 85 9 ASN A 361 ? ? -177.43 29.84 86 9 PRO A 381 ? ? -50.72 -179.21 87 9 SER A 384 ? ? -111.21 -79.18 88 9 MET A 394 ? ? -161.86 -8.12 89 10 GLU A 314 ? ? -157.50 61.42 90 10 MET A 318 ? ? 62.41 -77.81 91 10 ARG A 321 ? ? 53.87 97.60 92 10 GLU A 322 ? ? -98.80 -68.43 93 10 PHE A 360 ? ? -94.23 -92.60 94 10 ASN A 361 ? ? -178.55 31.22 95 10 ARG A 379 ? ? 45.58 70.15 96 10 SER A 382 ? ? -176.79 -39.20 97 10 MET A 394 ? ? -169.51 29.70 98 10 ASP A 395 ? ? -149.00 11.09 99 11 GLU A 314 ? ? 62.69 140.40 100 11 ARG A 321 ? ? 49.62 96.82 101 11 PHE A 360 ? ? -93.53 -89.85 102 11 ASN A 361 ? ? -176.39 29.87 103 11 PRO A 381 ? ? -60.97 89.48 104 11 MET A 394 ? ? -156.68 -81.37 105 11 ASP A 395 ? ? -161.61 49.51 106 12 MET A 318 ? ? 174.48 171.88 107 12 LEU A 319 ? ? 60.45 -175.85 108 12 MET A 320 ? ? 68.43 125.86 109 12 PHE A 360 ? ? -92.16 -90.57 110 12 ASN A 361 ? ? -175.03 29.63 111 12 ARG A 379 ? ? -158.61 -72.33 112 12 HIS A 380 ? ? -178.07 -64.93 113 12 ARG A 383 ? ? -156.10 27.64 114 12 MET A 394 ? ? -154.62 -12.78 115 12 ASN A 397 ? ? -149.10 25.59 116 13 ARG A 317 ? ? -133.29 -48.00 117 13 ARG A 321 ? ? 60.70 80.14 118 13 GLU A 322 ? ? -97.53 -64.06 119 13 PHE A 360 ? ? -90.96 -92.04 120 13 ASN A 361 ? ? -177.66 31.46 121 13 SER A 382 ? ? 179.67 -81.79 122 13 MET A 394 ? ? -157.12 -82.88 123 13 ASP A 395 ? ? -163.77 36.81 124 14 ARG A 317 ? ? -173.14 -70.83 125 14 MET A 318 ? ? -175.80 126.29 126 14 PHE A 360 ? ? -90.92 -90.47 127 14 ASN A 361 ? ? -176.11 28.76 128 14 ARG A 383 ? ? -178.07 79.93 129 14 MET A 394 ? ? -157.86 -78.80 130 14 ASP A 395 ? ? -158.33 60.08 131 15 ARG A 317 ? ? 60.22 -164.44 132 15 ARG A 321 ? ? 60.57 113.15 133 15 GLU A 322 ? ? -96.48 -63.63 134 15 PHE A 360 ? ? -92.91 -90.81 135 15 ASN A 361 ? ? -177.40 30.39 136 15 MET A 394 ? ? -88.47 -74.98 137 15 ASP A 395 ? ? -160.72 26.24 138 15 ASN A 397 ? ? -151.71 -47.93 139 15 GLU A 398 ? ? -162.93 -44.57 140 16 MET A 316 ? ? -176.40 36.10 141 16 PHE A 360 ? ? -92.28 -88.45 142 16 ASN A 361 ? ? -175.33 30.14 143 16 SER A 382 ? ? -179.73 -81.29 144 16 MET A 394 ? ? -85.05 -72.38 145 16 ASP A 395 ? ? -158.62 22.30 146 16 ASN A 397 ? ? -150.68 -46.60 147 17 ALA A 315 ? ? 60.98 112.21 148 17 MET A 316 ? ? -172.44 63.68 149 17 GLU A 322 ? ? -96.67 -61.52 150 17 PHE A 360 ? ? -91.58 -88.85 151 17 ASN A 361 ? ? -175.97 30.41 152 17 ARG A 379 ? ? -158.37 -72.20 153 17 ASN A 397 ? ? -92.71 -71.28 154 18 MET A 316 ? ? -176.70 -38.38 155 18 MET A 318 ? ? 70.33 130.57 156 18 PHE A 360 ? ? -92.76 -90.29 157 18 ASN A 361 ? ? -177.74 31.17 158 18 SER A 382 ? ? 179.62 -79.87 159 19 LEU A 319 ? ? -97.05 -75.78 160 19 PHE A 360 ? ? -96.31 -92.15 161 19 ASN A 361 ? ? -179.17 32.30 162 19 SER A 384 ? ? -116.16 -81.83 163 19 MET A 394 ? ? -157.22 -31.23 164 19 ASN A 397 ? ? -90.50 -70.89 165 19 GLU A 398 ? ? -158.16 -45.19 166 20 ARG A 317 ? ? -142.67 -69.25 167 20 PHE A 360 ? ? -96.58 -94.10 168 20 ASN A 361 ? ? -179.18 32.29 169 20 SER A 382 ? ? -179.61 -80.79 170 20 MET A 394 ? ? -164.04 -20.67 171 21 PHE A 360 ? ? -89.25 -90.93 172 21 ASN A 361 ? ? -173.68 28.05 173 21 ARG A 379 ? ? -156.18 -70.92 174 21 PRO A 381 ? ? -48.26 175.20 175 21 SER A 382 ? ? -48.66 109.52 176 21 ARG A 383 ? ? -159.39 -41.74 177 21 SER A 384 ? ? -59.14 -165.25 178 21 GLU A 396 ? ? -74.92 -76.34 179 22 ALA A 315 ? ? -169.26 85.81 180 22 ARG A 317 ? ? 61.38 114.42 181 22 GLU A 322 ? ? -97.91 -63.97 182 22 PHE A 360 ? ? -90.69 -91.29 183 22 ASN A 361 ? ? -177.45 31.44 184 22 ARG A 379 ? ? -154.65 -73.78 185 22 HIS A 380 ? ? -179.58 -176.62 186 22 SER A 382 ? ? -47.09 163.05 187 22 ASN A 397 ? ? -90.84 -71.46 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLY 399 ? O ? A GLY 87 O 2 2 Y 1 A GLY 399 ? O ? A GLY 87 O 3 3 Y 1 A GLY 399 ? O ? A GLY 87 O 4 4 Y 1 A GLY 399 ? O ? A GLY 87 O 5 5 Y 1 A GLY 399 ? O ? A GLY 87 O 6 6 Y 1 A GLY 399 ? O ? A GLY 87 O 7 7 Y 1 A GLY 399 ? O ? A GLY 87 O 8 8 Y 1 A GLY 399 ? O ? A GLY 87 O 9 9 Y 1 A GLY 399 ? O ? A GLY 87 O 10 10 Y 1 A GLY 399 ? O ? A GLY 87 O 11 11 Y 1 A GLY 399 ? O ? A GLY 87 O 12 12 Y 1 A GLY 399 ? O ? A GLY 87 O 13 13 Y 1 A GLY 399 ? O ? A GLY 87 O 14 14 Y 1 A GLY 399 ? O ? A GLY 87 O 15 15 Y 1 A GLY 399 ? O ? A GLY 87 O 16 16 Y 1 A GLY 399 ? O ? A GLY 87 O 17 17 Y 1 A GLY 399 ? O ? A GLY 87 O 18 18 Y 1 A GLY 399 ? O ? A GLY 87 O 19 19 Y 1 A GLY 399 ? O ? A GLY 87 O 20 20 Y 1 A GLY 399 ? O ? A GLY 87 O 21 21 Y 1 A GLY 399 ? O ? A GLY 87 O 22 22 Y 1 A GLY 399 ? O ? A GLY 87 O #