HEADER LYASE 30-JUN-04 1TVZ TITLE CRYSTAL STRUCTURE OF 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A SYNTHASE TITLE 2 FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXY-3-METHYLGLUTARYL-COA SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HMG-COA SYNTHASE; COMPND 5 EC: 4.1.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MVAS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS HMG-COA SYNTHASE; HMGS, COENZYME A; THIOLASE FOLD; CONDENSING ENZYME; KEYWDS 2 CHOLESTEROL BIOSYNTHESIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR N.CAMPOBASSO,M.PATEL,I.E.WILDING,H.KALLENDER,M.ROSENBERG,M.GWYNN REVDAT 4 13-JUL-11 1TVZ 1 VERSN REVDAT 3 24-FEB-09 1TVZ 1 VERSN REVDAT 2 01-FEB-05 1TVZ 1 JRNL REMARK REVDAT 1 31-AUG-04 1TVZ 0 JRNL AUTH N.CAMPOBASSO,M.PATEL,I.E.WILDING,H.KALLENDER,M.ROSENBERG, JRNL AUTH 2 M.GWYNN JRNL TITL STAPHYLOCOCCUS AUREUS 3-HYDROXY-3-METHYLGLUTARYL-COA JRNL TITL 2 SYNTHASE: CRYSTAL STRUCTURE AND MECHANISM JRNL REF J.BIOL.CHEM. V. 279 44883 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15292254 JRNL DOI 10.1074/JBC.M407882200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 29725 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1577 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2024 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3040 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3106 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4211 ; 1.337 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 5.694 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 462 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2398 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1492 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 189 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1923 ; 0.631 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3083 ; 1.213 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1183 ; 2.171 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1128 ; 3.496 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TVZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-04. REMARK 100 THE RCSB ID CODE IS RCSB022952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32374 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27000 REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, AMMONIUM SULFATE, PH 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.03833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.07667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.03833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.07667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.03833 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 76.07667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.03833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 76.07667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATION: -X+1, -Y, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 119.40100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 311 CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG PRO A 100 O HOH A 1117 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 139 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 181 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 354 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 85 -54.01 -121.86 REMARK 500 GLU A 109 83.72 -169.28 REMARK 500 ALA A 110 -124.11 35.76 REMARK 500 GLU A 173 55.79 -94.98 REMARK 500 ASP A 174 19.37 -142.94 REMARK 500 TYR A 183 66.81 -108.51 REMARK 500 VAL A 273 -51.73 -129.24 REMARK 500 TYR A 277 -110.10 54.86 REMARK 500 ASP A 293 57.04 -105.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TXT RELATED DB: PDB REMARK 900 HMGS COMPLEXED WITH ACETOACETYL-COA DBREF 1TVZ A 1 388 GB 9937361 AAG02422 1 388 SEQADV 1TVZ CSD A 111 GB 9937361 CYS 111 MODIFIED RESIDUE SEQADV 1TVZ GLU A 320 GB 9937361 VAL 320 CONFLICT SEQRES 1 A 388 MET THR ILE GLY ILE ASP LYS ILE ASN PHE TYR VAL PRO SEQRES 2 A 388 LYS TYR TYR VAL ASP MET ALA LYS LEU ALA GLU ALA ARG SEQRES 3 A 388 GLN VAL ASP PRO ASN LYS PHE LEU ILE GLY ILE GLY GLN SEQRES 4 A 388 THR GLU MET ALA VAL SER PRO VAL ASN GLN ASP ILE VAL SEQRES 5 A 388 SER MET GLY ALA ASN ALA ALA LYS ASP ILE ILE THR ASP SEQRES 6 A 388 GLU ASP LYS LYS LYS ILE GLY MET VAL ILE VAL ALA THR SEQRES 7 A 388 GLU SER ALA VAL ASP ALA ALA LYS ALA ALA ALA VAL GLN SEQRES 8 A 388 ILE HIS ASN LEU LEU GLY ILE GLN PRO PHE ALA ARG CYS SEQRES 9 A 388 PHE GLU MET LYS GLU ALA CSD TYR ALA ALA THR PRO ALA SEQRES 10 A 388 ILE GLN LEU ALA LYS ASP TYR LEU ALA THR ARG PRO ASN SEQRES 11 A 388 GLU LYS VAL LEU VAL ILE ALA THR ASP THR ALA ARG TYR SEQRES 12 A 388 GLY LEU ASN SER GLY GLY GLU PRO THR GLN GLY ALA GLY SEQRES 13 A 388 ALA VAL ALA MET VAL ILE ALA HIS ASN PRO SER ILE LEU SEQRES 14 A 388 ALA LEU ASN GLU ASP ALA VAL ALA TYR THR GLU ASP VAL SEQRES 15 A 388 TYR ASP PHE TRP ARG PRO THR GLY HIS LYS TYR PRO LEU SEQRES 16 A 388 VAL ASP GLY ALA LEU SER LYS ASP ALA TYR ILE ARG SER SEQRES 17 A 388 PHE GLN GLN SER TRP ASN GLU TYR ALA LYS ARG GLN GLY SEQRES 18 A 388 LYS SER LEU ALA ASP PHE ALA SER LEU CYS PHE HIS VAL SEQRES 19 A 388 PRO PHE THR LYS MET GLY LYS LYS ALA LEU GLU SER ILE SEQRES 20 A 388 ILE ASP ASN ALA ASP GLU THR THR GLN GLU ARG LEU ARG SEQRES 21 A 388 SER GLY TYR GLU ASP ALA VAL ASP TYR ASN ARG TYR VAL SEQRES 22 A 388 GLY ASN ILE TYR THR GLY SER LEU TYR LEU SER LEU ILE SEQRES 23 A 388 SER LEU LEU GLU ASN ARG ASP LEU GLN ALA GLY GLU THR SEQRES 24 A 388 ILE GLY LEU PHE SER TYR GLY SER GLY SER VAL VAL GLU SEQRES 25 A 388 PHE TYR SER ALA THR LEU VAL GLU GLY TYR LYS ASP HIS SEQRES 26 A 388 LEU ASP GLN ALA ALA HIS LYS ALA LEU LEU ASN ASN ARG SEQRES 27 A 388 THR GLU VAL SER VAL ASP ALA TYR GLU THR PHE PHE LYS SEQRES 28 A 388 ARG PHE ASP ASP VAL GLU PHE ASP GLU GLU GLN ASP ALA SEQRES 29 A 388 VAL HIS GLU ASP ARG HIS ILE PHE TYR LEU SER ASN ILE SEQRES 30 A 388 GLU ASN ASN VAL ARG GLU TYR HIS ARG PRO GLU MODRES 1TVZ CSD A 111 CYS 3-SULFINOALANINE HET CSD A 111 8 HET SO4 A1001 5 HETNAM CSD 3-SULFINOALANINE HETNAM SO4 SULFATE ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *198(H2 O) HELIX 1 1 MET A 19 ARG A 26 1 8 HELIX 2 2 ASP A 29 ILE A 35 1 7 HELIX 3 3 ASP A 50 ASP A 61 1 12 HELIX 4 4 THR A 64 LYS A 70 1 7 HELIX 5 5 ALA A 87 GLY A 97 1 11 HELIX 6 6 GLU A 109 TYR A 112 5 4 HELIX 7 7 ALA A 113 ALA A 126 1 14 HELIX 8 8 GLY A 149 GLN A 153 5 5 HELIX 9 9 LEU A 200 GLY A 221 1 22 HELIX 10 10 SER A 223 PHE A 227 5 5 HELIX 11 11 PHE A 236 ILE A 248 1 13 HELIX 12 12 ASP A 252 TYR A 272 1 21 HELIX 13 13 ILE A 276 THR A 278 5 3 HELIX 14 14 GLY A 279 ARG A 292 1 14 HELIX 15 15 GLY A 321 LEU A 326 5 6 HELIX 16 16 ASP A 327 ASN A 337 1 11 HELIX 17 17 SER A 342 VAL A 356 1 15 HELIX 18 18 ALA A 364 ASP A 368 5 5 SHEET 1 A 8 ARG A 103 MET A 107 0 SHEET 2 A 8 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 A 8 LYS A 132 ALA A 141 1 O ILE A 136 N ILE A 75 SHEET 4 A 8 GLY A 154 HIS A 164 -1 O VAL A 158 N ALA A 137 SHEET 5 A 8 ILE A 3 TYR A 11 -1 N ASP A 6 O VAL A 161 SHEET 6 A 8 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 A 8 VAL A 310 LEU A 318 -1 O THR A 317 N ALA A 170 SHEET 8 A 8 VAL A 176 THR A 179 -1 N TYR A 178 O VAL A 311 SHEET 1 B 9 ARG A 103 MET A 107 0 SHEET 2 B 9 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 B 9 LYS A 132 ALA A 141 1 O ILE A 136 N ILE A 75 SHEET 4 B 9 GLY A 154 HIS A 164 -1 O VAL A 158 N ALA A 137 SHEET 5 B 9 ILE A 3 TYR A 11 -1 N ASP A 6 O VAL A 161 SHEET 6 B 9 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 B 9 VAL A 310 LEU A 318 -1 O THR A 317 N ALA A 170 SHEET 8 B 9 THR A 299 GLY A 306 -1 N LEU A 302 O TYR A 314 SHEET 9 B 9 SER A 229 PHE A 232 1 N SER A 229 O GLY A 301 SHEET 1 C 3 GLU A 41 VAL A 44 0 SHEET 2 C 3 TYR A 15 ASP A 18 -1 N VAL A 17 O MET A 42 SHEET 3 C 3 THR A 339 VAL A 341 1 O VAL A 341 N TYR A 16 SHEET 1 D 2 PHE A 185 TRP A 186 0 SHEET 2 D 2 LEU A 195 VAL A 196 -1 O LEU A 195 N TRP A 186 SHEET 1 E 2 TYR A 373 GLU A 378 0 SHEET 2 E 2 VAL A 381 HIS A 385 -1 O GLU A 383 N ASN A 376 LINK C ALA A 110 N CSD A 111 1555 1555 1.33 LINK C CSD A 111 N TYR A 112 1555 1555 1.33 CISPEP 1 GLY A 308 SER A 309 0 -2.01 SITE 1 AC1 3 LYS A 70 LYS A 132 ARG A 369 CRYST1 119.401 119.401 114.115 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008375 0.004835 0.000000 0.00000 SCALE2 0.000000 0.009671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008763 0.00000