data_1TZI # _entry.id 1TZI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1TZI pdb_00001tzi 10.2210/pdb1tzi/pdb RCSB RCSB023056 ? ? WWPDB D_1000023056 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-31 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_entry_details 6 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TZI _pdbx_database_status.recvd_initial_deposition_date 2004-07-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1TZH _pdbx_database_related.details 'Crystal Structure of the Fab YADS1 Complexed with h-VEGF' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fellouse, F.A.' 1 'Wiesmann, C.' 2 'Sidhu, S.S.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Synthetic antibodies from a four-amino-acid code: A dominant role for tyrosine in antigen recognition' Proc.Natl.Acad.Sci.USA 101 12467 12472 2004 PNASA6 US 0027-8424 0040 ? 15306681 10.1073/pnas.0401786101 1 'Phage-displayed antibody libraries of synthetic heavy chain complementarity determining regions' J.Mol.Biol. 338 299 310 2004 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fellouse, F.A.' 1 ? primary 'Wiesmann, C.' 2 ? primary 'Sidhu, S.S.' 3 ? 1 'Sidhu, S.S.' 4 ? 1 'Li, B.' 5 ? 1 'Chen, Y.' 6 ? 1 'Fellouse, F.A.' 7 ? 1 'Eigenbrot, C.' 8 ? 1 'Fuh, G.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fab YADS2 Light Chain' 23387.828 1 ? ? ? ? 2 polymer man 'Fab YADS2 Heavy Chain' 23376.049 1 ? ? ? ? 3 polymer man 'Vascular endothelial growth factor A' 11948.680 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'VEGF-A, Vascular permeability factor, VPF, h-vegf' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIQMTQSPSSLSASVGDRVTITCRASQSYAYAVAWYQQKPGKAPKLLIYDASYLYSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQAYSSPDTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;DIQMTQSPSSLSASVGDRVTITCRASQSYAYAVAWYQQKPGKAPKLLIYDASYLYSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQAYSSPDTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; A ? 2 'polypeptide(L)' no no ;EVQLVESGGGLVQPGGSLRLSCAASGFAIYDYDIHWVRQAPGKGLEWVADIAPYAGATAYADSVKGRFTISADTSKNTAY LQMNSLRAEDTAVYYCSRSSYAYYAAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS ; ;EVQLVESGGGLVQPGGSLRLSCAASGFAIYDYDIHWVRQAPGKGLEWVADIAPYAGATAYADSVKGRFTISADTSKNTAY LQMNSLRAEDTAVYYCSRSSYAYYAAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS ; B ? 3 'polypeptide(L)' no no ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; V ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 GLN n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 SER n 1 10 SER n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 ARG n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 SER n 1 29 TYR n 1 30 ALA n 1 31 TYR n 1 32 ALA n 1 33 VAL n 1 34 ALA n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 LYS n 1 40 PRO n 1 41 GLY n 1 42 LYS n 1 43 ALA n 1 44 PRO n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ILE n 1 49 TYR n 1 50 ASP n 1 51 ALA n 1 52 SER n 1 53 TYR n 1 54 LEU n 1 55 TYR n 1 56 SER n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 ASP n 1 71 PHE n 1 72 THR n 1 73 LEU n 1 74 THR n 1 75 ILE n 1 76 SER n 1 77 SER n 1 78 LEU n 1 79 GLN n 1 80 PRO n 1 81 GLU n 1 82 ASP n 1 83 PHE n 1 84 ALA n 1 85 THR n 1 86 TYR n 1 87 TYR n 1 88 CYS n 1 89 GLN n 1 90 GLN n 1 91 ALA n 1 92 TYR n 1 93 SER n 1 94 SER n 1 95 PRO n 1 96 ASP n 1 97 THR n 1 98 PHE n 1 99 GLY n 1 100 GLN n 1 101 GLY n 1 102 THR n 1 103 LYS n 1 104 VAL n 1 105 GLU n 1 106 ILE n 1 107 LYS n 1 108 ARG n 1 109 THR n 1 110 VAL n 1 111 ALA n 1 112 ALA n 1 113 PRO n 1 114 SER n 1 115 VAL n 1 116 PHE n 1 117 ILE n 1 118 PHE n 1 119 PRO n 1 120 PRO n 1 121 SER n 1 122 ASP n 1 123 GLU n 1 124 GLN n 1 125 LEU n 1 126 LYS n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 ALA n 1 131 SER n 1 132 VAL n 1 133 VAL n 1 134 CYS n 1 135 LEU n 1 136 LEU n 1 137 ASN n 1 138 ASN n 1 139 PHE n 1 140 TYR n 1 141 PRO n 1 142 ARG n 1 143 GLU n 1 144 ALA n 1 145 LYS n 1 146 VAL n 1 147 GLN n 1 148 TRP n 1 149 LYS n 1 150 VAL n 1 151 ASP n 1 152 ASN n 1 153 ALA n 1 154 LEU n 1 155 GLN n 1 156 SER n 1 157 GLY n 1 158 ASN n 1 159 SER n 1 160 GLN n 1 161 GLU n 1 162 SER n 1 163 VAL n 1 164 THR n 1 165 GLU n 1 166 GLN n 1 167 ASP n 1 168 SER n 1 169 LYS n 1 170 ASP n 1 171 SER n 1 172 THR n 1 173 TYR n 1 174 SER n 1 175 LEU n 1 176 SER n 1 177 SER n 1 178 THR n 1 179 LEU n 1 180 THR n 1 181 LEU n 1 182 SER n 1 183 LYS n 1 184 ALA n 1 185 ASP n 1 186 TYR n 1 187 GLU n 1 188 LYS n 1 189 HIS n 1 190 LYS n 1 191 VAL n 1 192 TYR n 1 193 ALA n 1 194 CYS n 1 195 GLU n 1 196 VAL n 1 197 THR n 1 198 HIS n 1 199 GLN n 1 200 GLY n 1 201 LEU n 1 202 SER n 1 203 SER n 1 204 PRO n 1 205 VAL n 1 206 THR n 1 207 LYS n 1 208 SER n 1 209 PHE n 1 210 ASN n 1 211 ARG n 1 212 GLY n 1 213 GLU n 1 214 CYS n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 ALA n 2 29 ILE n 2 30 TYR n 2 31 ASP n 2 32 TYR n 2 33 ASP n 2 34 ILE n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 ASP n 2 51 ILE n 2 52 ALA n 2 53 PRO n 2 54 TYR n 2 55 ALA n 2 56 GLY n 2 57 ALA n 2 58 THR n 2 59 ALA n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ALA n 2 73 ASP n 2 74 THR n 2 75 SER n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 ALA n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 SER n 2 98 ARG n 2 99 SER n 2 100 SER n 2 101 TYR n 2 102 ALA n 2 103 TYR n 2 104 TYR n 2 105 ALA n 2 106 ALA n 2 107 MET n 2 108 ASP n 2 109 TYR n 2 110 TRP n 2 111 GLY n 2 112 GLN n 2 113 GLY n 2 114 THR n 2 115 LEU n 2 116 VAL n 2 117 THR n 2 118 VAL n 2 119 SER n 2 120 SER n 2 121 ALA n 2 122 SER n 2 123 THR n 2 124 LYS n 2 125 GLY n 2 126 PRO n 2 127 SER n 2 128 VAL n 2 129 PHE n 2 130 PRO n 2 131 LEU n 2 132 ALA n 2 133 PRO n 2 134 SER n 2 135 SER n 2 136 LYS n 2 137 SER n 2 138 THR n 2 139 SER n 2 140 GLY n 2 141 GLY n 2 142 THR n 2 143 ALA n 2 144 ALA n 2 145 LEU n 2 146 GLY n 2 147 CYS n 2 148 LEU n 2 149 VAL n 2 150 LYS n 2 151 ASP n 2 152 TYR n 2 153 PHE n 2 154 PRO n 2 155 GLU n 2 156 PRO n 2 157 VAL n 2 158 THR n 2 159 VAL n 2 160 SER n 2 161 TRP n 2 162 ASN n 2 163 SER n 2 164 GLY n 2 165 ALA n 2 166 LEU n 2 167 THR n 2 168 SER n 2 169 GLY n 2 170 VAL n 2 171 HIS n 2 172 THR n 2 173 PHE n 2 174 PRO n 2 175 ALA n 2 176 VAL n 2 177 LEU n 2 178 GLN n 2 179 SER n 2 180 SER n 2 181 GLY n 2 182 LEU n 2 183 TYR n 2 184 SER n 2 185 LEU n 2 186 SER n 2 187 SER n 2 188 VAL n 2 189 VAL n 2 190 THR n 2 191 VAL n 2 192 PRO n 2 193 SER n 2 194 SER n 2 195 SER n 2 196 LEU n 2 197 GLY n 2 198 THR n 2 199 GLN n 2 200 THR n 2 201 TYR n 2 202 ILE n 2 203 CYS n 2 204 ASN n 2 205 VAL n 2 206 ASN n 2 207 HIS n 2 208 LYS n 2 209 PRO n 2 210 SER n 2 211 ASN n 2 212 THR n 2 213 LYS n 2 214 VAL n 2 215 ASP n 2 216 LYS n 2 217 LYS n 2 218 VAL n 2 219 GLU n 2 220 PRO n 2 221 LYS n 2 222 SER n 3 1 GLY n 3 2 GLN n 3 3 ASN n 3 4 HIS n 3 5 HIS n 3 6 GLU n 3 7 VAL n 3 8 VAL n 3 9 LYS n 3 10 PHE n 3 11 MET n 3 12 ASP n 3 13 VAL n 3 14 TYR n 3 15 GLN n 3 16 ARG n 3 17 SER n 3 18 TYR n 3 19 CYS n 3 20 HIS n 3 21 PRO n 3 22 ILE n 3 23 GLU n 3 24 THR n 3 25 LEU n 3 26 VAL n 3 27 ASP n 3 28 ILE n 3 29 PHE n 3 30 GLN n 3 31 GLU n 3 32 TYR n 3 33 PRO n 3 34 ASP n 3 35 GLU n 3 36 ILE n 3 37 GLU n 3 38 TYR n 3 39 ILE n 3 40 PHE n 3 41 LYS n 3 42 PRO n 3 43 SER n 3 44 CYS n 3 45 VAL n 3 46 PRO n 3 47 LEU n 3 48 MET n 3 49 ARG n 3 50 CYS n 3 51 GLY n 3 52 GLY n 3 53 CYS n 3 54 CYS n 3 55 ASN n 3 56 ASP n 3 57 GLU n 3 58 GLY n 3 59 LEU n 3 60 GLU n 3 61 CYS n 3 62 VAL n 3 63 PRO n 3 64 THR n 3 65 GLU n 3 66 GLU n 3 67 SER n 3 68 ASN n 3 69 ILE n 3 70 THR n 3 71 MET n 3 72 GLN n 3 73 ILE n 3 74 MET n 3 75 ARG n 3 76 ILE n 3 77 LYS n 3 78 PRO n 3 79 HIS n 3 80 GLN n 3 81 GLY n 3 82 GLN n 3 83 HIS n 3 84 ILE n 3 85 GLY n 3 86 GLU n 3 87 MET n 3 88 SER n 3 89 PHE n 3 90 LEU n 3 91 GLN n 3 92 HIS n 3 93 ASN n 3 94 LYS n 3 95 CYS n 3 96 GLU n 3 97 CYS n 3 98 ARG n 3 99 PRO n 3 100 LYS n 3 101 LYS n 3 102 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 16C9 ? ? ? ? ? ? ? PLASMID ? ? ? F0771-B6 ? ? 2 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 16C9 ? ? ? ? ? ? ? PLASMID ? ? ? F0771-B6 ? ? 3 1 sample ? ? ? human Homo 'VEGF, VEGFA' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 CYS 134 134 134 CYS CYS A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 HIS 189 189 189 HIS HIS A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 CYS 194 194 194 CYS CYS A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 HIS 198 198 198 HIS HIS A . n A 1 199 GLN 199 199 199 GLN GLN A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 SER 203 203 203 SER SER A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 ARG 211 211 211 ARG ARG A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 GLU 213 213 213 GLU GLU A . n A 1 214 CYS 214 214 214 CYS CYS A . n B 2 1 GLU 1 1 1 GLU GLU B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 GLN 13 13 13 GLN GLN B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 GLY 15 15 15 GLY GLY B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 ARG 19 19 19 ARG ARG B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 ALA 23 23 23 ALA ALA B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 PHE 27 27 27 PHE PHE B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 TYR 30 30 30 TYR TYR B . n B 2 31 ASP 31 31 31 ASP ASP B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 ASP 33 33 33 ASP ASP B . n B 2 34 ILE 34 34 34 ILE ILE B . n B 2 35 HIS 35 35 35 HIS HIS B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 VAL 37 37 37 VAL VAL B . n B 2 38 ARG 38 38 38 ARG ARG B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 LYS 43 43 43 LYS LYS B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 LEU 45 45 45 LEU LEU B . n B 2 46 GLU 46 46 46 GLU GLU B . n B 2 47 TRP 47 47 47 TRP TRP B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 ALA 49 49 49 ALA ALA B . n B 2 50 ASP 50 50 50 ASP ASP B . n B 2 51 ILE 51 51 51 ILE ILE B . n B 2 52 ALA 52 52 52 ALA ALA B . n B 2 53 PRO 53 52 52 PRO PRO B A n B 2 54 TYR 54 53 53 TYR TYR B . n B 2 55 ALA 55 54 54 ALA ALA B . n B 2 56 GLY 56 55 55 GLY GLY B . n B 2 57 ALA 57 56 56 ALA ALA B . n B 2 58 THR 58 57 57 THR THR B . n B 2 59 ALA 59 58 58 ALA ALA B . n B 2 60 TYR 60 59 59 TYR TYR B . n B 2 61 ALA 61 60 60 ALA ALA B . n B 2 62 ASP 62 61 61 ASP ASP B . n B 2 63 SER 63 62 62 SER SER B . n B 2 64 VAL 64 63 63 VAL VAL B . n B 2 65 LYS 65 64 64 LYS LYS B . n B 2 66 GLY 66 65 65 GLY GLY B . n B 2 67 ARG 67 66 66 ARG ARG B . n B 2 68 PHE 68 67 67 PHE PHE B . n B 2 69 THR 69 68 68 THR THR B . n B 2 70 ILE 70 69 69 ILE ILE B . n B 2 71 SER 71 70 70 SER SER B . n B 2 72 ALA 72 71 71 ALA ALA B . n B 2 73 ASP 73 72 72 ASP ASP B . n B 2 74 THR 74 73 73 THR THR B . n B 2 75 SER 75 74 74 SER SER B . n B 2 76 LYS 76 75 75 LYS LYS B . n B 2 77 ASN 77 76 76 ASN ASN B . n B 2 78 THR 78 77 77 THR THR B . n B 2 79 ALA 79 78 78 ALA ALA B . n B 2 80 TYR 80 79 79 TYR TYR B . n B 2 81 LEU 81 80 80 LEU LEU B . n B 2 82 GLN 82 81 81 GLN GLN B . n B 2 83 MET 83 82 82 MET MET B . n B 2 84 ASN 84 82 82 ASN ASN B A n B 2 85 SER 85 82 82 SER SER B B n B 2 86 LEU 86 82 82 LEU LEU B C n B 2 87 ARG 87 83 83 ARG ARG B . n B 2 88 ALA 88 84 84 ALA ALA B . n B 2 89 GLU 89 85 85 GLU GLU B . n B 2 90 ASP 90 86 86 ASP ASP B . n B 2 91 THR 91 87 87 THR THR B . n B 2 92 ALA 92 88 88 ALA ALA B . n B 2 93 VAL 93 89 89 VAL VAL B . n B 2 94 TYR 94 90 90 TYR TYR B . n B 2 95 TYR 95 91 91 TYR TYR B . n B 2 96 CYS 96 92 92 CYS CYS B . n B 2 97 SER 97 93 93 SER SER B . n B 2 98 ARG 98 94 94 ARG ARG B . n B 2 99 SER 99 95 95 SER SER B . n B 2 100 SER 100 96 96 SER SER B . n B 2 101 TYR 101 97 97 TYR TYR B . n B 2 102 ALA 102 98 98 ALA ALA B . n B 2 103 TYR 103 99 99 TYR TYR B . n B 2 104 TYR 104 100 100 TYR TYR B . n B 2 105 ALA 105 100 100 ALA ALA B A n B 2 106 ALA 106 100 100 ALA ALA B B n B 2 107 MET 107 100 100 MET MET B C n B 2 108 ASP 108 101 101 ASP ASP B . n B 2 109 TYR 109 102 102 TYR TYR B . n B 2 110 TRP 110 103 103 TRP TRP B . n B 2 111 GLY 111 104 104 GLY GLY B . n B 2 112 GLN 112 105 105 GLN GLN B . n B 2 113 GLY 113 106 106 GLY GLY B . n B 2 114 THR 114 107 107 THR THR B . n B 2 115 LEU 115 108 108 LEU LEU B . n B 2 116 VAL 116 109 109 VAL VAL B . n B 2 117 THR 117 110 110 THR THR B . n B 2 118 VAL 118 111 111 VAL VAL B . n B 2 119 SER 119 112 112 SER SER B . n B 2 120 SER 120 113 113 SER SER B . n B 2 121 ALA 121 114 114 ALA ALA B . n B 2 122 SER 122 115 115 SER SER B . n B 2 123 THR 123 116 116 THR THR B . n B 2 124 LYS 124 117 117 LYS LYS B . n B 2 125 GLY 125 118 118 GLY GLY B . n B 2 126 PRO 126 119 119 PRO PRO B . n B 2 127 SER 127 120 120 SER SER B . n B 2 128 VAL 128 121 121 VAL VAL B . n B 2 129 PHE 129 122 122 PHE PHE B . n B 2 130 PRO 130 123 123 PRO PRO B . n B 2 131 LEU 131 124 124 LEU LEU B . n B 2 132 ALA 132 125 125 ALA ALA B . n B 2 133 PRO 133 126 126 PRO PRO B . n B 2 134 SER 134 127 127 SER SER B . n B 2 135 SER 135 128 128 SER SER B . n B 2 136 LYS 136 129 129 LYS LYS B . n B 2 137 SER 137 130 130 SER SER B . n B 2 138 THR 138 131 131 THR THR B . n B 2 139 SER 139 132 132 SER SER B . n B 2 140 GLY 140 133 133 GLY GLY B . n B 2 141 GLY 141 134 134 GLY GLY B . n B 2 142 THR 142 135 135 THR THR B . n B 2 143 ALA 143 136 136 ALA ALA B . n B 2 144 ALA 144 137 137 ALA ALA B . n B 2 145 LEU 145 138 138 LEU LEU B . n B 2 146 GLY 146 139 139 GLY GLY B . n B 2 147 CYS 147 140 140 CYS CYS B . n B 2 148 LEU 148 141 141 LEU LEU B . n B 2 149 VAL 149 142 142 VAL VAL B . n B 2 150 LYS 150 143 143 LYS LYS B . n B 2 151 ASP 151 144 144 ASP ASP B . n B 2 152 TYR 152 145 145 TYR TYR B . n B 2 153 PHE 153 146 146 PHE PHE B . n B 2 154 PRO 154 147 147 PRO PRO B . n B 2 155 GLU 155 148 148 GLU GLU B . n B 2 156 PRO 156 149 149 PRO PRO B . n B 2 157 VAL 157 150 150 VAL VAL B . n B 2 158 THR 158 151 151 THR THR B . n B 2 159 VAL 159 152 152 VAL VAL B . n B 2 160 SER 160 153 153 SER SER B . n B 2 161 TRP 161 154 154 TRP TRP B . n B 2 162 ASN 162 155 155 ASN ASN B . n B 2 163 SER 163 156 156 SER SER B . n B 2 164 GLY 164 157 157 GLY GLY B . n B 2 165 ALA 165 158 158 ALA ALA B . n B 2 166 LEU 166 159 159 LEU LEU B . n B 2 167 THR 167 160 160 THR THR B . n B 2 168 SER 168 161 161 SER SER B . n B 2 169 GLY 169 162 162 GLY GLY B . n B 2 170 VAL 170 163 163 VAL VAL B . n B 2 171 HIS 171 164 164 HIS HIS B . n B 2 172 THR 172 165 165 THR THR B . n B 2 173 PHE 173 166 166 PHE PHE B . n B 2 174 PRO 174 167 167 PRO PRO B . n B 2 175 ALA 175 168 168 ALA ALA B . n B 2 176 VAL 176 169 169 VAL VAL B . n B 2 177 LEU 177 170 170 LEU LEU B . n B 2 178 GLN 178 171 171 GLN GLN B . n B 2 179 SER 179 172 172 SER SER B . n B 2 180 SER 180 173 173 SER SER B . n B 2 181 GLY 181 174 174 GLY GLY B . n B 2 182 LEU 182 175 175 LEU LEU B . n B 2 183 TYR 183 176 176 TYR TYR B . n B 2 184 SER 184 177 177 SER SER B . n B 2 185 LEU 185 178 178 LEU LEU B . n B 2 186 SER 186 179 179 SER SER B . n B 2 187 SER 187 180 180 SER SER B . n B 2 188 VAL 188 181 181 VAL VAL B . n B 2 189 VAL 189 182 182 VAL VAL B . n B 2 190 THR 190 183 183 THR THR B . n B 2 191 VAL 191 184 184 VAL VAL B . n B 2 192 PRO 192 185 185 PRO PRO B . n B 2 193 SER 193 186 186 SER SER B . n B 2 194 SER 194 187 187 SER SER B . n B 2 195 SER 195 188 188 SER SER B . n B 2 196 LEU 196 189 189 LEU LEU B . n B 2 197 GLY 197 190 190 GLY GLY B . n B 2 198 THR 198 191 191 THR THR B . n B 2 199 GLN 199 192 192 GLN GLN B . n B 2 200 THR 200 193 193 THR THR B . n B 2 201 TYR 201 194 194 TYR TYR B . n B 2 202 ILE 202 195 195 ILE ILE B . n B 2 203 CYS 203 196 196 CYS CYS B . n B 2 204 ASN 204 197 197 ASN ASN B . n B 2 205 VAL 205 198 198 VAL VAL B . n B 2 206 ASN 206 199 199 ASN ASN B . n B 2 207 HIS 207 200 200 HIS HIS B . n B 2 208 LYS 208 201 201 LYS LYS B . n B 2 209 PRO 209 202 202 PRO PRO B . n B 2 210 SER 210 203 203 SER SER B . n B 2 211 ASN 211 204 204 ASN ASN B . n B 2 212 THR 212 205 205 THR THR B . n B 2 213 LYS 213 206 206 LYS LYS B . n B 2 214 VAL 214 207 207 VAL VAL B . n B 2 215 ASP 215 208 208 ASP ASP B . n B 2 216 LYS 216 209 209 LYS LYS B . n B 2 217 LYS 217 210 210 LYS LYS B . n B 2 218 VAL 218 211 211 VAL VAL B . n B 2 219 GLU 219 212 212 GLU GLU B . n B 2 220 PRO 220 213 213 PRO PRO B . n B 2 221 LYS 221 214 214 LYS LYS B . n B 2 222 SER 222 215 215 SER SER B . n C 3 1 GLY 1 8 ? ? ? V . n C 3 2 GLN 2 9 ? ? ? V . n C 3 3 ASN 3 10 ? ? ? V . n C 3 4 HIS 4 11 ? ? ? V . n C 3 5 HIS 5 12 ? ? ? V . n C 3 6 GLU 6 13 13 GLU GLU V . n C 3 7 VAL 7 14 14 VAL VAL V . n C 3 8 VAL 8 15 15 VAL VAL V . n C 3 9 LYS 9 16 16 LYS LYS V . n C 3 10 PHE 10 17 17 PHE PHE V . n C 3 11 MET 11 18 18 MET MET V . n C 3 12 ASP 12 19 19 ASP ASP V . n C 3 13 VAL 13 20 20 VAL VAL V . n C 3 14 TYR 14 21 21 TYR TYR V . n C 3 15 GLN 15 22 22 GLN GLN V . n C 3 16 ARG 16 23 23 ARG ARG V . n C 3 17 SER 17 24 24 SER SER V . n C 3 18 TYR 18 25 25 TYR TYR V . n C 3 19 CYS 19 26 26 CYS CYS V . n C 3 20 HIS 20 27 27 HIS HIS V . n C 3 21 PRO 21 28 28 PRO PRO V . n C 3 22 ILE 22 29 29 ILE ILE V . n C 3 23 GLU 23 30 30 GLU GLU V . n C 3 24 THR 24 31 31 THR THR V . n C 3 25 LEU 25 32 32 LEU LEU V . n C 3 26 VAL 26 33 33 VAL VAL V . n C 3 27 ASP 27 34 34 ASP ASP V . n C 3 28 ILE 28 35 35 ILE ILE V . n C 3 29 PHE 29 36 36 PHE PHE V . n C 3 30 GLN 30 37 37 GLN GLN V . n C 3 31 GLU 31 38 38 GLU GLU V . n C 3 32 TYR 32 39 39 TYR TYR V . n C 3 33 PRO 33 40 40 PRO PRO V . n C 3 34 ASP 34 41 41 ASP ASP V . n C 3 35 GLU 35 42 42 GLU GLU V . n C 3 36 ILE 36 43 43 ILE ILE V . n C 3 37 GLU 37 44 44 GLU GLU V . n C 3 38 TYR 38 45 45 TYR TYR V . n C 3 39 ILE 39 46 46 ILE ILE V . n C 3 40 PHE 40 47 47 PHE PHE V . n C 3 41 LYS 41 48 48 LYS LYS V . n C 3 42 PRO 42 49 49 PRO PRO V . n C 3 43 SER 43 50 50 SER SER V . n C 3 44 CYS 44 51 51 CYS CYS V . n C 3 45 VAL 45 52 52 VAL VAL V . n C 3 46 PRO 46 53 53 PRO PRO V . n C 3 47 LEU 47 54 54 LEU LEU V . n C 3 48 MET 48 55 55 MET MET V . n C 3 49 ARG 49 56 56 ARG ARG V . n C 3 50 CYS 50 57 57 CYS CYS V . n C 3 51 GLY 51 58 58 GLY GLY V . n C 3 52 GLY 52 59 59 GLY GLY V . n C 3 53 CYS 53 60 60 CYS CYS V . n C 3 54 CYS 54 61 61 CYS CYS V . n C 3 55 ASN 55 62 62 ASN ASN V . n C 3 56 ASP 56 63 63 ASP ASP V . n C 3 57 GLU 57 64 64 GLU GLU V . n C 3 58 GLY 58 65 65 GLY GLY V . n C 3 59 LEU 59 66 66 LEU LEU V . n C 3 60 GLU 60 67 67 GLU GLU V . n C 3 61 CYS 61 68 68 CYS CYS V . n C 3 62 VAL 62 69 69 VAL VAL V . n C 3 63 PRO 63 70 70 PRO PRO V . n C 3 64 THR 64 71 71 THR THR V . n C 3 65 GLU 65 72 72 GLU GLU V . n C 3 66 GLU 66 73 73 GLU GLU V . n C 3 67 SER 67 74 74 SER SER V . n C 3 68 ASN 68 75 75 ASN ASN V . n C 3 69 ILE 69 76 76 ILE ILE V . n C 3 70 THR 70 77 77 THR THR V . n C 3 71 MET 71 78 78 MET MET V . n C 3 72 GLN 72 79 79 GLN GLN V . n C 3 73 ILE 73 80 80 ILE ILE V . n C 3 74 MET 74 81 81 MET MET V . n C 3 75 ARG 75 82 82 ARG ARG V . n C 3 76 ILE 76 83 83 ILE ILE V . n C 3 77 LYS 77 84 84 LYS LYS V . n C 3 78 PRO 78 85 85 PRO PRO V . n C 3 79 HIS 79 86 86 HIS HIS V . n C 3 80 GLN 80 87 87 GLN GLN V . n C 3 81 GLY 81 88 88 GLY GLY V . n C 3 82 GLN 82 89 89 GLN GLN V . n C 3 83 HIS 83 90 90 HIS HIS V . n C 3 84 ILE 84 91 91 ILE ILE V . n C 3 85 GLY 85 92 92 GLY GLY V . n C 3 86 GLU 86 93 93 GLU GLU V . n C 3 87 MET 87 94 94 MET MET V . n C 3 88 SER 88 95 95 SER SER V . n C 3 89 PHE 89 96 96 PHE PHE V . n C 3 90 LEU 90 97 97 LEU LEU V . n C 3 91 GLN 91 98 98 GLN GLN V . n C 3 92 HIS 92 99 99 HIS HIS V . n C 3 93 ASN 93 100 100 ASN ASN V . n C 3 94 LYS 94 101 101 LYS LYS V . n C 3 95 CYS 95 102 102 CYS CYS V . n C 3 96 GLU 96 103 103 GLU GLU V . n C 3 97 CYS 97 104 104 CYS CYS V . n C 3 98 ARG 98 105 105 ARG ARG V . n C 3 99 PRO 99 106 106 PRO PRO V . n C 3 100 LYS 100 107 107 LYS LYS V . n C 3 101 LYS 101 108 108 LYS LYS V . n C 3 102 ASP 102 109 109 ASP ASP V . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1TZI _cell.length_a 96.504 _cell.length_b 149.588 _cell.length_c 117.421 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TZI _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1TZI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.2 _exptl_crystal.density_percent_sol 61.5 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.1 _exptl_crystal_grow.pdbx_details 'LITHIUM CHLORIDE, PEG 6000, MES, pH 6.1, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-03-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1TZI _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.80 _reflns.d_resolution_low 50.00 _reflns.number_all 21429 _reflns.number_obs 20861 _reflns.percent_possible_obs 97.3 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 82.92 _reflns_shell.Rmerge_I_obs 0.4 _reflns_shell.pdbx_Rsym_value 0.4 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 83.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2110 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1TZI _refine.ls_number_reflns_obs 19702 _refine.ls_number_reflns_all 21229 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 97.63 _refine.ls_R_factor_obs 0.2197 _refine.ls_R_factor_all 0.2197 _refine.ls_R_factor_R_work 0.21786 _refine.ls_R_factor_R_free 0.25447 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1023 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 46.845 _refine.aniso_B[1][1] -8.87 _refine.aniso_B[2][2] 1.62 _refine.aniso_B[3][3] 7.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'The VEGF is from pdb entry 1VPF. The Fab is from an in-house determined structure.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.685 _refine.pdbx_overall_ESU_R_Free 0.332 _refine.overall_SU_ML 0.299 _refine.overall_SU_B 16.331 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4077 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4077 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 4180 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 3602 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.334 1.952 ? 5685 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.945 3.000 ? 8459 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.592 5.000 ? 530 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 628 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 4672 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 817 'X-RAY DIFFRACTION' ? r_nbd_refined 0.203 0.200 ? 766 'X-RAY DIFFRACTION' ? r_nbd_other 0.224 0.200 ? 4141 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.086 0.200 ? 2582 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.134 0.200 ? 55 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.342 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.208 0.200 ? 71 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.175 0.200 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.211 2.500 ? 2656 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 5.231 5.000 ? 4294 'X-RAY DIFFRACTION' ? r_scbond_it 2.869 2.500 ? 1524 'X-RAY DIFFRACTION' ? r_scangle_it 4.696 5.000 ? 1391 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 25 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.857 _refine_ls_shell.number_reflns_R_work 965 _refine_ls_shell.R_factor_R_work 0.301 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_obs 965 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1TZI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1TZI _struct.title 'Crystal Structure of the Fab YADS2 Complexed with h-VEGF' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TZI _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'phage display, antibody library, protein engineering, immune system' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VEGFA_HUMAN P15692 3 ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; 34 ? 2 PDB 1TZI 1TZI 1 ? ? ? 3 PDB 1TZI 1TZI 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1TZI V 1 ? 102 ? P15692 34 ? 135 ? 8 109 2 2 1TZI A 1 ? 214 ? 1TZI 1 ? 214 ? 1 214 3 3 1TZI B 1 ? 222 ? 1TZI 1 ? 215 ? 1 215 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 58.7105000000 # _struct_biol.id 1 _struct_biol.details ;For VEGF, the biological assembly corresponds to two copies of chain V, related by a two fold symetry and physically linked by a disulfide bridge. The Fab VEGF complex, the biological assembly corresponds to all chains, related by a two fold symetry. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 121 ? GLY A 128 ? SER A 121 GLY A 128 1 ? 8 HELX_P HELX_P2 2 LYS A 183 ? LYS A 188 ? LYS A 183 LYS A 188 1 ? 6 HELX_P HELX_P3 3 ARG B 87 ? THR B 91 ? ARG B 83 THR B 87 5 ? 5 HELX_P HELX_P4 4 SER B 134 ? LYS B 136 ? SER B 127 LYS B 129 5 ? 3 HELX_P HELX_P5 5 SER B 163 ? ALA B 165 ? SER B 156 ALA B 158 5 ? 3 HELX_P HELX_P6 6 LYS B 208 ? ASN B 211 ? LYS B 201 ASN B 204 5 ? 4 HELX_P HELX_P7 7 LYS C 9 ? TYR C 18 ? LYS V 16 TYR V 25 1 ? 10 HELX_P HELX_P8 8 ILE C 28 ? TYR C 32 ? ILE V 35 TYR V 39 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 23 A CYS 88 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf2 disulf ? ? A CYS 134 SG ? ? ? 1_555 A CYS 194 SG ? ? A CYS 134 A CYS 194 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 22 B CYS 92 1_555 ? ? ? ? ? ? ? 2.063 ? ? disulf4 disulf ? ? B CYS 147 SG ? ? ? 1_555 B CYS 203 SG ? ? B CYS 140 B CYS 196 1_555 ? ? ? ? ? ? ? 2.012 ? ? disulf5 disulf ? ? C CYS 19 SG ? ? ? 1_555 C CYS 61 SG ? ? V CYS 26 V CYS 68 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf6 disulf ? ? C CYS 44 SG ? ? ? 1_555 C CYS 53 SG ? ? V CYS 51 V CYS 60 3_555 ? ? ? ? ? ? ? 2.906 ? ? disulf7 disulf ? ? C CYS 50 SG ? ? ? 1_555 C CYS 95 SG ? ? V CYS 57 V CYS 102 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf8 disulf ? ? C CYS 54 SG ? ? ? 1_555 C CYS 97 SG ? ? V CYS 61 V CYS 104 1_555 ? ? ? ? ? ? ? 2.022 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 23 ? CYS A 88 ? CYS A 23 ? 1_555 CYS A 88 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 134 ? CYS A 194 ? CYS A 134 ? 1_555 CYS A 194 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 22 ? CYS B 96 ? CYS B 22 ? 1_555 CYS B 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 147 ? CYS B 203 ? CYS B 140 ? 1_555 CYS B 196 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS C 19 ? CYS C 61 ? CYS V 26 ? 1_555 CYS V 68 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS C 44 ? CYS C 53 ? CYS V 51 ? 1_555 CYS V 60 ? 3_555 SG SG . . . None 'Disulfide bridge' 7 CYS C 50 ? CYS C 95 ? CYS V 57 ? 1_555 CYS V 102 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS C 54 ? CYS C 97 ? CYS V 61 ? 1_555 CYS V 104 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 A PRO 8 A ? PRO 8 A 1 -6.98 2 TYR 140 A . ? TYR 140 A PRO 141 A ? PRO 141 A 1 2.82 3 ARG 211 A . ? ARG 211 A GLY 212 A ? GLY 212 A 1 -6.18 4 GLU 213 A . ? GLU 213 A CYS 214 A ? CYS 214 A 1 0.77 5 PHE 153 B . ? PHE 146 B PRO 154 B ? PRO 147 B 1 -9.46 6 GLU 155 B . ? GLU 148 B PRO 156 B ? PRO 149 B 1 -3.47 7 LYS 41 C . ? LYS 48 V PRO 42 C ? PRO 49 V 1 -8.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 6 ? G ? 4 ? H ? 4 ? I ? 4 ? J ? 3 ? K ? 2 ? L ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel K 1 2 ? anti-parallel L 1 2 ? anti-parallel L 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 10 ? SER A 14 ? SER A 10 SER A 14 A 2 THR A 102 ? LYS A 107 ? THR A 102 LYS A 107 A 3 ALA A 84 ? GLN A 90 ? ALA A 84 GLN A 90 A 4 VAL A 33 ? GLN A 38 ? VAL A 33 GLN A 38 A 5 LYS A 45 ? TYR A 49 ? LYS A 45 TYR A 49 A 6 TYR A 53 ? LEU A 54 ? TYR A 53 LEU A 54 B 1 VAL A 19 ? ARG A 24 ? VAL A 19 ARG A 24 B 2 ASP A 70 ? ILE A 75 ? ASP A 70 ILE A 75 B 3 PHE A 62 ? SER A 67 ? PHE A 62 SER A 67 C 1 SER A 114 ? PHE A 118 ? SER A 114 PHE A 118 C 2 THR A 129 ? PHE A 139 ? THR A 129 PHE A 139 C 3 TYR A 173 ? SER A 182 ? TYR A 173 SER A 182 C 4 GLU A 161 ? VAL A 163 ? GLU A 161 VAL A 163 D 1 ALA A 153 ? LEU A 154 ? ALA A 153 LEU A 154 D 2 LYS A 145 ? VAL A 150 ? LYS A 145 VAL A 150 D 3 VAL A 191 ? HIS A 198 ? VAL A 191 HIS A 198 D 4 LEU A 201 ? ASN A 210 ? LEU A 201 ASN A 210 E 1 GLN B 3 ? SER B 7 ? GLN B 3 SER B 7 E 2 LEU B 18 ? SER B 25 ? LEU B 18 SER B 25 E 3 THR B 78 ? MET B 83 ? THR B 77 MET B 82 E 4 THR B 69 ? ASP B 73 ? THR B 68 ASP B 72 F 1 LEU B 11 ? VAL B 12 ? LEU B 11 VAL B 12 F 2 THR B 114 ? VAL B 118 ? THR B 107 VAL B 111 F 3 ALA B 92 ? SER B 99 ? ALA B 88 SER B 95 F 4 ASP B 33 ? GLN B 39 ? ASP B 33 GLN B 39 F 5 GLU B 46 ? ALA B 52 ? GLU B 46 ALA B 52 F 6 ALA B 57 ? TYR B 60 ? ALA B 56 TYR B 59 G 1 LEU B 11 ? VAL B 12 ? LEU B 11 VAL B 12 G 2 THR B 114 ? VAL B 118 ? THR B 107 VAL B 111 G 3 ALA B 92 ? SER B 99 ? ALA B 88 SER B 95 G 4 MET B 107 C TRP B 110 ? MET B 100 TRP B 103 H 1 SER B 127 ? LEU B 131 ? SER B 120 LEU B 124 H 2 THR B 142 ? TYR B 152 ? THR B 135 TYR B 145 H 3 TYR B 183 ? PRO B 192 ? TYR B 176 PRO B 185 H 4 VAL B 170 ? THR B 172 ? VAL B 163 THR B 165 I 1 THR B 138 ? SER B 139 ? THR B 131 SER B 132 I 2 THR B 142 ? TYR B 152 ? THR B 135 TYR B 145 I 3 TYR B 183 ? PRO B 192 ? TYR B 176 PRO B 185 I 4 VAL B 176 ? LEU B 177 ? VAL B 169 LEU B 170 J 1 THR B 158 ? TRP B 161 ? THR B 151 TRP B 154 J 2 ILE B 202 ? HIS B 207 ? ILE B 195 HIS B 200 J 3 THR B 212 ? LYS B 217 ? THR B 205 LYS B 210 K 1 HIS C 20 ? ASP C 27 ? HIS V 27 ASP V 34 K 2 CYS C 44 ? GLY C 51 ? CYS V 51 GLY V 58 L 1 ILE C 39 ? LYS C 41 ? ILE V 46 LYS V 48 L 2 LEU C 59 ? LYS C 77 ? LEU V 66 LYS V 84 L 3 GLY C 81 ? PRO C 99 ? GLY V 88 PRO V 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 11 ? N LEU A 11 O LYS A 103 ? O LYS A 103 A 2 3 O VAL A 104 ? O VAL A 104 N ALA A 84 ? N ALA A 84 A 3 4 O TYR A 87 ? O TYR A 87 N TYR A 36 ? N TYR A 36 A 4 5 N GLN A 37 ? N GLN A 37 O LYS A 45 ? O LYS A 45 A 5 6 N TYR A 49 ? N TYR A 49 O TYR A 53 ? O TYR A 53 B 1 2 N CYS A 23 ? N CYS A 23 O PHE A 71 ? O PHE A 71 B 2 3 O THR A 74 ? O THR A 74 N SER A 63 ? N SER A 63 C 1 2 N SER A 114 ? N SER A 114 O ASN A 137 ? O ASN A 137 C 2 3 N VAL A 132 ? N VAL A 132 O LEU A 179 ? O LEU A 179 C 3 4 O SER A 176 ? O SER A 176 N SER A 162 ? N SER A 162 D 1 2 O ALA A 153 ? O ALA A 153 N VAL A 150 ? N VAL A 150 D 2 3 N LYS A 145 ? N LYS A 145 O THR A 197 ? O THR A 197 D 3 4 N TYR A 192 ? N TYR A 192 O PHE A 209 ? O PHE A 209 E 1 2 N VAL B 5 ? N VAL B 5 O ALA B 23 ? O ALA B 23 E 2 3 N LEU B 20 ? N LEU B 20 O LEU B 81 ? O LEU B 80 E 3 4 O THR B 78 ? O THR B 77 N ASP B 73 ? N ASP B 72 F 1 2 N VAL B 12 ? N VAL B 12 O THR B 117 ? O THR B 110 F 2 3 O VAL B 116 ? O VAL B 109 N ALA B 92 ? N ALA B 88 F 3 4 O TYR B 95 ? O TYR B 91 N VAL B 37 ? N VAL B 37 F 4 5 N ILE B 34 ? N ILE B 34 O ILE B 51 ? O ILE B 51 F 5 6 N ASP B 50 ? N ASP B 50 O ALA B 59 ? O ALA B 58 G 1 2 N VAL B 12 ? N VAL B 12 O THR B 117 ? O THR B 110 G 2 3 O VAL B 116 ? O VAL B 109 N ALA B 92 ? N ALA B 88 G 3 4 N ARG B 98 ? N ARG B 94 O ASP B 108 ? O ASP B 101 H 1 2 N PHE B 129 ? N PHE B 122 O LEU B 148 ? O LEU B 141 H 2 3 N VAL B 149 ? N VAL B 142 O LEU B 185 ? O LEU B 178 H 3 4 O VAL B 188 ? O VAL B 181 N HIS B 171 ? N HIS B 164 I 1 2 N SER B 139 ? N SER B 132 O THR B 142 ? O THR B 135 I 2 3 N VAL B 149 ? N VAL B 142 O LEU B 185 ? O LEU B 178 I 3 4 O SER B 184 ? O SER B 177 N VAL B 176 ? N VAL B 169 J 1 2 N SER B 160 ? N SER B 153 O ASN B 204 ? O ASN B 197 J 2 3 N HIS B 207 ? N HIS B 200 O THR B 212 ? O THR B 205 K 1 2 N THR C 24 ? N THR V 31 O LEU C 47 ? O LEU V 54 L 1 2 N ILE C 39 ? N ILE V 46 O ILE C 76 ? O ILE V 83 L 2 3 N LYS C 77 ? N LYS V 84 O GLY C 81 ? O GLY V 88 # _pdbx_entry_details.entry_id 1TZI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 1 ? ? CG A ASP 1 ? ? OD2 A ASP 1 ? ? 123.74 118.30 5.44 0.90 N 2 1 CB V ASP 19 ? ? CG V ASP 19 ? ? OD2 V ASP 19 ? ? 124.13 118.30 5.83 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -69.79 -160.48 2 1 TYR A 29 ? ? -5.89 -108.78 3 1 ALA A 30 ? ? 58.69 91.88 4 1 ALA A 32 ? ? -90.09 42.87 5 1 LEU A 47 ? ? -120.92 -60.68 6 1 ASP A 50 ? ? 43.74 14.55 7 1 ALA A 51 ? ? 94.47 -33.29 8 1 ALA A 84 ? ? -178.35 -179.77 9 1 GLN A 89 ? ? -162.04 113.81 10 1 ASP A 96 ? ? -64.70 27.08 11 1 ASN A 138 ? ? 55.08 79.18 12 1 ALA A 144 ? ? -177.11 134.64 13 1 ASN A 152 ? ? 58.82 9.22 14 1 LEU A 154 ? ? -39.79 137.97 15 1 GLN A 160 ? ? -170.61 127.83 16 1 THR A 164 ? ? -36.36 138.39 17 1 LEU A 201 ? ? -161.45 88.74 18 1 PRO A 204 ? ? -39.33 98.91 19 1 PHE B 27 ? ? 175.19 152.73 20 1 TYR B 99 ? ? -98.13 35.66 21 1 ALA B 100 A ? 67.69 -5.26 22 1 ASP B 144 ? ? 66.94 86.67 23 1 PHE B 146 ? ? -176.99 143.58 24 1 PRO B 147 ? ? -72.27 -160.40 25 1 ASN B 155 ? ? 28.20 50.11 26 1 PRO B 213 ? ? -52.29 -171.51 27 1 CYS V 26 ? ? -21.89 108.45 28 1 GLU V 44 ? ? -77.53 29.60 29 1 ASP V 63 ? ? 169.48 147.40 30 1 SER V 74 ? ? -173.46 129.51 31 1 HIS V 86 ? ? 87.42 -3.58 32 1 GLN V 87 ? ? -112.19 -77.45 33 1 LYS V 108 ? ? -55.23 103.45 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 TYR _pdbx_validate_peptide_omega.auth_asym_id_1 V _pdbx_validate_peptide_omega.auth_seq_id_1 39 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 V _pdbx_validate_peptide_omega.auth_seq_id_2 40 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.68 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 41.4673 41.7638 16.5588 0.3291 0.2785 0.3541 -0.1912 -0.0865 0.1565 6.5056 3.7384 1.0625 0.3282 -1.2943 0.1317 0.3033 -0.9396 -0.6390 0.5326 -0.4492 -0.5369 0.1674 0.1218 0.1459 'X-RAY DIFFRACTION' 2 ? refined 75.0629 50.9724 3.8372 0.1636 0.4500 0.2798 0.0865 -0.0948 -0.0211 6.0887 5.9477 1.2189 1.6787 -1.0076 0.7641 -0.1119 -0.7766 -0.3798 -0.2469 0.2676 -0.1874 0.1994 0.8518 -0.1556 'X-RAY DIFFRACTION' 3 ? refined 36.6517 63.0872 10.9753 0.3471 0.2617 0.0696 -0.0732 0.1123 -0.1080 6.8210 5.1979 1.3479 2.5721 0.5539 0.7661 0.4906 -0.3658 0.3156 0.2345 -0.5014 0.4575 -0.0704 0.0094 0.0109 'X-RAY DIFFRACTION' 4 ? refined 64.2039 56.9371 -5.8362 0.2934 0.2058 0.2468 0.0806 -0.0867 -0.0282 4.1881 4.5481 2.8093 -0.3574 -1.6383 2.5602 0.0245 0.0944 -0.1535 -0.3304 -0.0425 0.2049 -0.1479 0.2274 0.0180 'X-RAY DIFFRACTION' 5 ? refined 1.0525 53.2817 37.3582 0.0239 0.4973 0.3085 0.0819 0.0013 0.1328 6.3423 0.5995 6.3566 0.8842 -5.4427 -1.1858 -0.2306 -1.0282 -0.8947 -0.0424 -0.1753 0.0715 0.1204 1.1645 0.4058 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 1 A 109 109 ? A A 'X-RAY DIFFRACTION' ? 2 2 A 110 110 A 213 213 ? A A 'X-RAY DIFFRACTION' ? 3 3 B 1 1 B 128 121 ? B B 'X-RAY DIFFRACTION' ? 4 4 B 129 122 B 222 215 ? B B 'X-RAY DIFFRACTION' ? 5 5 C 6 13 C 102 109 ? V V 'X-RAY DIFFRACTION' ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE AUTHORS INFORMED THAT THE SEQUENCES OF Fab YADS2 Light Chain and Fab YADS2 heavy Chain are not yet available in any reference sequence database. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 V GLY 8 ? C GLY 1 2 1 Y 1 V GLN 9 ? C GLN 2 3 1 Y 1 V ASN 10 ? C ASN 3 4 1 Y 1 V HIS 11 ? C HIS 4 5 1 Y 1 V HIS 12 ? C HIS 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1VPF _pdbx_initial_refinement_model.details 'The VEGF is from pdb entry 1VPF. The Fab is from an in-house determined structure.' # _atom_sites.entry_id 1TZI _atom_sites.fract_transf_matrix[1][1] 0.010362 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006685 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008516 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_