HEADER TRANSFERASE 30-JUL-04 1U6R TITLE TRANSITION STATE ANALOG COMPLEX OF MUSCLE CREATINE KINASE (R134K) TITLE 2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CREATINE KINASE, M CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: M-CK; COMPND 5 EC: 2.7.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 GENE: CKM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CREATINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.F.OHREN,M.L.KUNDRACIK,C.L.BORDERS,P.EDMISTON,R.E.VIOLA REVDAT 5 23-AUG-23 1U6R 1 REMARK REVDAT 4 20-OCT-21 1U6R 1 REMARK SEQADV LINK REVDAT 3 16-NOV-16 1U6R 1 JRNL VERSN REVDAT 2 24-FEB-09 1U6R 1 VERSN REVDAT 1 02-AUG-05 1U6R 0 JRNL AUTH J.F.OHREN,M.L.KUNDRACIK,C.L.BORDERS JR,P.EDMISTON,R.E.VIOLA JRNL TITL STRUCTURAL ASYMMETRY AND INTERSUBUNIT COMMUNICATION IN JRNL TITL 2 MUSCLE CREATINE KINASE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 63 381 2007 JRNL REFN ISSN 0907-4449 JRNL PMID 17327675 JRNL DOI 10.1107/S0907444906056204 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 84376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4446 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5035 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6048 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 1155 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.717 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6277 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 5570 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8468 ; 1.214 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13082 ; 1.122 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 758 ; 5.758 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 299 ;36.240 ;24.582 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1140 ;13.371 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;16.096 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 897 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6937 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1222 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1390 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5941 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3068 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3380 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 878 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.117 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 64 ; 0.150 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 84 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4927 ; 0.900 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1553 ; 0.139 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6094 ; 0.995 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2903 ; 1.690 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2374 ; 2.299 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1U6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000023315. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88822 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1CRK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8K, 25 MM AMMONIUM ACETATE, 25 REMARK 280 MM SODIUM NITRATE AND 0.1 M SODIUM CACODYLATE, PH 6.5., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.34450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.77650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.28600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.77650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.34450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.28600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 36 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 220 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 334 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 67 -65.93 -97.76 REMARK 500 GLU A 230 -112.18 -85.92 REMARK 500 LYS A 303 50.71 -96.15 REMARK 500 ASP A 325 62.39 -112.59 REMARK 500 ALA A 328 72.30 55.75 REMARK 500 ARG A 340 -47.42 -135.71 REMARK 500 ASP A 373 51.12 -152.92 REMARK 500 ASP A 374 -25.91 -176.97 REMARK 500 PHE B 2 -154.48 64.12 REMARK 500 ASP B 119 29.92 -143.35 REMARK 500 GLU B 230 -110.73 -80.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A1801 O3B REMARK 620 2 ADP A1801 O1A 78.1 REMARK 620 3 HOH A2174 O 95.2 165.8 REMARK 620 4 HOH A2233 O 105.0 106.1 87.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B1501 O1A REMARK 620 2 ADP B1501 O1B 82.9 REMARK 620 3 NO3 B1701 O3 90.2 84.9 REMARK 620 4 HOH B2217 O 84.9 101.4 171.5 REMARK 620 5 HOH B2218 O 168.6 96.8 101.1 84.0 REMARK 620 6 HOH B2219 O 87.3 168.2 88.6 84.2 94.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOM B 1601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CRK RELATED DB: PDB REMARK 900 MUSCLE CREATINE KINASE DBREF 1U6R A 1 380 UNP P00563 KCRM_RABIT 2 381 DBREF 1U6R B 1 380 UNP P00563 KCRM_RABIT 2 381 SEQADV 1U6R LYS A 134 UNP P00563 ARG 135 ENGINEERED MUTATION SEQADV 1U6R LYS B 134 UNP P00563 ARG 135 ENGINEERED MUTATION SEQRES 1 A 380 PRO PHE GLY ASN THR HIS ASN LYS TYR LYS LEU ASN TYR SEQRES 2 A 380 LYS SER GLU GLU GLU TYR PRO ASP LEU SER LYS HIS ASN SEQRES 3 A 380 ASN HIS MET ALA LYS VAL LEU THR PRO ASP LEU TYR LYS SEQRES 4 A 380 LYS LEU ARG ASP LYS GLU THR PRO SER GLY PHE THR LEU SEQRES 5 A 380 ASP ASP VAL ILE GLN THR GLY VAL ASP ASN PRO GLY HIS SEQRES 6 A 380 PRO PHE ILE MET THR VAL GLY CYS VAL ALA GLY ASP GLU SEQRES 7 A 380 GLU SER TYR THR VAL PHE LYS ASP LEU PHE ASP PRO ILE SEQRES 8 A 380 ILE GLN ASP ARG HIS GLY GLY PHE LYS PRO THR ASP LYS SEQRES 9 A 380 HIS LYS THR ASP LEU ASN HIS GLU ASN LEU LYS GLY GLY SEQRES 10 A 380 ASP ASP LEU ASP PRO HIS TYR VAL LEU SER SER ARG VAL SEQRES 11 A 380 ARG THR GLY LYS SER ILE LYS GLY TYR THR LEU PRO PRO SEQRES 12 A 380 HIS CYS SER ARG GLY GLU ARG ARG ALA VAL GLU LYS LEU SEQRES 13 A 380 SER VAL GLU ALA LEU ASN SER LEU THR GLY GLU PHE LYS SEQRES 14 A 380 GLY LYS TYR TYR PRO LEU LYS SER MET THR GLU GLN GLU SEQRES 15 A 380 GLN GLN GLN LEU ILE ASP ASP HIS PHE LEU PHE ASP LYS SEQRES 16 A 380 PRO VAL SER PRO LEU LEU LEU ALA SER GLY MET ALA ARG SEQRES 17 A 380 ASP TRP PRO ASP ALA ARG GLY ILE TRP HIS ASN ASP ASN SEQRES 18 A 380 LYS SER PHE LEU VAL TRP VAL ASN GLU GLU ASP HIS LEU SEQRES 19 A 380 ARG VAL ILE SER MET GLU LYS GLY GLY ASN MET LYS GLU SEQRES 20 A 380 VAL PHE ARG ARG PHE CYS VAL GLY LEU GLN LYS ILE GLU SEQRES 21 A 380 GLU ILE PHE LYS LYS ALA GLY HIS PRO PHE MET TRP ASN SEQRES 22 A 380 GLU HIS LEU GLY TYR VAL LEU THR CYS PRO SER ASN LEU SEQRES 23 A 380 GLY THR GLY LEU ARG GLY GLY VAL HIS VAL LYS LEU ALA SEQRES 24 A 380 HIS LEU SER LYS HIS PRO LYS PHE GLU GLU ILE LEU THR SEQRES 25 A 380 ARG LEU ARG LEU GLN LYS ARG GLY THR GLY GLY VAL ASP SEQRES 26 A 380 THR ALA ALA VAL GLY SER VAL PHE ASP ILE SER ASN ALA SEQRES 27 A 380 ASP ARG LEU GLY SER SER GLU VAL GLU GLN VAL GLN LEU SEQRES 28 A 380 VAL VAL ASP GLY VAL LYS LEU MET VAL GLU MET GLU LYS SEQRES 29 A 380 LYS LEU GLU LYS GLY GLN SER ILE ASP ASP MET ILE PRO SEQRES 30 A 380 ALA GLN LYS SEQRES 1 B 380 PRO PHE GLY ASN THR HIS ASN LYS TYR LYS LEU ASN TYR SEQRES 2 B 380 LYS SER GLU GLU GLU TYR PRO ASP LEU SER LYS HIS ASN SEQRES 3 B 380 ASN HIS MET ALA LYS VAL LEU THR PRO ASP LEU TYR LYS SEQRES 4 B 380 LYS LEU ARG ASP LYS GLU THR PRO SER GLY PHE THR LEU SEQRES 5 B 380 ASP ASP VAL ILE GLN THR GLY VAL ASP ASN PRO GLY HIS SEQRES 6 B 380 PRO PHE ILE MET THR VAL GLY CYS VAL ALA GLY ASP GLU SEQRES 7 B 380 GLU SER TYR THR VAL PHE LYS ASP LEU PHE ASP PRO ILE SEQRES 8 B 380 ILE GLN ASP ARG HIS GLY GLY PHE LYS PRO THR ASP LYS SEQRES 9 B 380 HIS LYS THR ASP LEU ASN HIS GLU ASN LEU LYS GLY GLY SEQRES 10 B 380 ASP ASP LEU ASP PRO HIS TYR VAL LEU SER SER ARG VAL SEQRES 11 B 380 ARG THR GLY LYS SER ILE LYS GLY TYR THR LEU PRO PRO SEQRES 12 B 380 HIS CYS SER ARG GLY GLU ARG ARG ALA VAL GLU LYS LEU SEQRES 13 B 380 SER VAL GLU ALA LEU ASN SER LEU THR GLY GLU PHE LYS SEQRES 14 B 380 GLY LYS TYR TYR PRO LEU LYS SER MET THR GLU GLN GLU SEQRES 15 B 380 GLN GLN GLN LEU ILE ASP ASP HIS PHE LEU PHE ASP LYS SEQRES 16 B 380 PRO VAL SER PRO LEU LEU LEU ALA SER GLY MET ALA ARG SEQRES 17 B 380 ASP TRP PRO ASP ALA ARG GLY ILE TRP HIS ASN ASP ASN SEQRES 18 B 380 LYS SER PHE LEU VAL TRP VAL ASN GLU GLU ASP HIS LEU SEQRES 19 B 380 ARG VAL ILE SER MET GLU LYS GLY GLY ASN MET LYS GLU SEQRES 20 B 380 VAL PHE ARG ARG PHE CYS VAL GLY LEU GLN LYS ILE GLU SEQRES 21 B 380 GLU ILE PHE LYS LYS ALA GLY HIS PRO PHE MET TRP ASN SEQRES 22 B 380 GLU HIS LEU GLY TYR VAL LEU THR CYS PRO SER ASN LEU SEQRES 23 B 380 GLY THR GLY LEU ARG GLY GLY VAL HIS VAL LYS LEU ALA SEQRES 24 B 380 HIS LEU SER LYS HIS PRO LYS PHE GLU GLU ILE LEU THR SEQRES 25 B 380 ARG LEU ARG LEU GLN LYS ARG GLY THR GLY GLY VAL ASP SEQRES 26 B 380 THR ALA ALA VAL GLY SER VAL PHE ASP ILE SER ASN ALA SEQRES 27 B 380 ASP ARG LEU GLY SER SER GLU VAL GLU GLN VAL GLN LEU SEQRES 28 B 380 VAL VAL ASP GLY VAL LYS LEU MET VAL GLU MET GLU LYS SEQRES 29 B 380 LYS LEU GLU LYS GLY GLN SER ILE ASP ASP MET ILE PRO SEQRES 30 B 380 ALA GLN LYS HET MG A1802 1 HET ADP A1801 27 HET MG B1502 1 HET NO3 B1701 4 HET ADP B1501 27 HET IOM B1601 9 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM NO3 NITRATE ION HETNAM IOM (DIAMINOMETHYL-METHYL-AMINO)-ACETIC ACID FORMUL 3 MG 2(MG 2+) FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 6 NO3 N O3 1- FORMUL 8 IOM C4 H11 N3 O2 FORMUL 9 HOH *1155(H2 O) HELIX 1 1 ASN A 4 LEU A 11 1 8 HELIX 2 2 LYS A 14 TYR A 19 1 6 HELIX 3 3 ASN A 27 LEU A 33 1 7 HELIX 4 4 THR A 34 ARG A 42 1 9 HELIX 5 5 THR A 51 ASN A 62 1 12 HELIX 6 6 GLU A 79 PHE A 84 1 6 HELIX 7 7 PHE A 84 HIS A 96 1 13 HELIX 8 8 ASN A 110 LEU A 114 5 5 HELIX 9 9 SER A 146 SER A 163 1 18 HELIX 10 10 LEU A 164 PHE A 168 5 5 HELIX 11 11 LYS A 176 MET A 178 5 3 HELIX 12 12 THR A 179 ASP A 189 1 11 HELIX 13 13 SER A 198 ALA A 203 1 6 HELIX 14 14 ASN A 244 GLY A 267 1 24 HELIX 15 15 CYS A 282 LEU A 286 5 5 HELIX 16 16 LEU A 298 LYS A 303 1 6 HELIX 17 17 LYS A 306 ARG A 315 1 10 HELIX 18 18 SER A 344 GLY A 369 1 26 HELIX 19 19 PRO B 1 TYR B 13 5 13 HELIX 20 20 LYS B 14 TYR B 19 1 6 HELIX 21 21 ASN B 27 LEU B 33 1 7 HELIX 22 22 THR B 34 ARG B 42 1 9 HELIX 23 23 THR B 51 ASN B 62 1 12 HELIX 24 24 GLU B 79 PHE B 84 1 6 HELIX 25 25 PHE B 84 HIS B 96 1 13 HELIX 26 26 ASN B 110 LEU B 114 5 5 HELIX 27 27 SER B 146 ASN B 162 1 17 HELIX 28 28 SER B 163 LEU B 164 5 2 HELIX 29 29 THR B 165 PHE B 168 5 4 HELIX 30 30 LYS B 176 MET B 178 5 3 HELIX 31 31 THR B 179 ASP B 189 1 11 HELIX 32 32 SER B 198 SER B 204 1 7 HELIX 33 33 ASN B 244 ALA B 266 1 23 HELIX 34 34 CYS B 282 LEU B 286 5 5 HELIX 35 35 HIS B 300 HIS B 304 5 5 HELIX 36 36 LYS B 306 ARG B 315 1 10 HELIX 37 37 SER B 344 LYS B 368 1 25 SHEET 1 A 8 GLY A 170 PRO A 174 0 SHEET 2 A 8 GLY A 215 ASN A 219 -1 O ILE A 216 N TYR A 173 SHEET 3 A 8 PHE A 224 VAL A 228 -1 O VAL A 226 N TRP A 217 SHEET 4 A 8 LEU A 234 LYS A 241 -1 O ILE A 237 N LEU A 225 SHEET 5 A 8 VAL A 125 LYS A 134 -1 N VAL A 130 O SER A 238 SHEET 6 A 8 ARG A 291 LYS A 297 -1 O GLY A 293 N ARG A 129 SHEET 7 A 8 VAL A 332 ASN A 337 -1 O PHE A 333 N VAL A 296 SHEET 8 A 8 LEU A 316 ARG A 319 -1 N GLN A 317 O SER A 336 SHEET 1 B 2 TRP A 272 ASN A 273 0 SHEET 2 B 2 GLY A 277 TYR A 278 -1 O GLY A 277 N ASN A 273 SHEET 1 C 8 GLY B 170 PRO B 174 0 SHEET 2 C 8 GLY B 215 ASN B 219 -1 O ILE B 216 N TYR B 173 SHEET 3 C 8 PHE B 224 VAL B 228 -1 O VAL B 226 N TRP B 217 SHEET 4 C 8 LEU B 234 LYS B 241 -1 O ILE B 237 N LEU B 225 SHEET 5 C 8 VAL B 125 LYS B 134 -1 N VAL B 130 O SER B 238 SHEET 6 C 8 ARG B 291 LYS B 297 -1 O GLY B 293 N ARG B 129 SHEET 7 C 8 VAL B 332 ASN B 337 -1 O PHE B 333 N VAL B 296 SHEET 8 C 8 LEU B 316 ARG B 319 -1 N GLN B 317 O SER B 336 SHEET 1 D 2 TRP B 272 ASN B 273 0 SHEET 2 D 2 GLY B 277 TYR B 278 -1 O GLY B 277 N ASN B 273 LINK O3B ADP A1801 MG MG A1802 1555 1555 2.52 LINK O1A ADP A1801 MG MG A1802 1555 1555 2.35 LINK MG MG A1802 O HOH A2174 1555 1555 2.51 LINK MG MG A1802 O HOH A2233 1555 1555 2.30 LINK O1A ADP B1501 MG MG B1502 1555 1555 2.19 LINK O1B ADP B1501 MG MG B1502 1555 1555 2.12 LINK MG MG B1502 O3 NO3 B1701 1555 1555 2.32 LINK MG MG B1502 O HOH B2217 1555 1555 2.25 LINK MG MG B1502 O HOH B2218 1555 1555 2.19 LINK MG MG B1502 O HOH B2219 1555 1555 2.23 CISPEP 1 TRP A 210 PRO A 211 0 1.74 CISPEP 2 TRP B 210 PRO B 211 0 3.23 SITE 1 AC1 5 ADP B1501 NO3 B1701 HOH B2217 HOH B2218 SITE 2 AC1 5 HOH B2219 SITE 1 AC2 8 ARG B 131 GLU B 231 ARG B 235 ARG B 319 SITE 2 AC2 8 ADP B1501 MG B1502 IOM B1601 HOH B2200 SITE 1 AC3 3 ADP A1801 HOH A2174 HOH A2233 SITE 1 AC4 25 SER B 127 ARG B 129 ARG B 131 HIS B 190 SITE 2 AC4 25 ARG B 235 MET B 239 ARG B 291 GLY B 293 SITE 3 AC4 25 VAL B 294 HIS B 295 ARG B 319 THR B 321 SITE 4 AC4 25 GLY B 322 GLY B 323 VAL B 324 ASP B 334 SITE 5 AC4 25 MG B1502 NO3 B1701 HOH B1721 HOH B1734 SITE 6 AC4 25 HOH B1756 HOH B1757 HOH B1802 HOH B2217 SITE 7 AC4 25 HOH B2219 SITE 1 AC5 11 THR B 70 VAL B 71 LEU B 200 GLU B 231 SITE 2 AC5 11 CYS B 282 ASN B 285 NO3 B1701 HOH B1707 SITE 3 AC5 11 HOH B1754 HOH B1763 HOH B1777 SITE 1 AC6 16 SER A 127 ARG A 129 ARG A 131 ARG A 235 SITE 2 AC6 16 ARG A 291 VAL A 294 HIS A 295 ARG A 319 SITE 3 AC6 16 GLY A 322 GLY A 323 VAL A 324 ASP A 334 SITE 4 AC6 16 MG A1802 HOH A2014 HOH A2233 HOH A2281 CRYST1 48.689 92.572 165.553 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020539 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006040 0.00000