HEADER LIGASE 08-MAY-03 1UDZ TITLE ISOLEUCYL-TRNA SYNTHETASE EDITING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOLEUCYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CP1 DOMAIN; COMPND 5 EC: 6.1.1.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: ILES; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS AMINOACYL-TRNA SYNTHETASE, CP1, EDITING, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR R.FUKUNAGA,S.FUKAI,R.ISHITANI,O.NUREKI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 6 03-APR-24 1UDZ 1 REMARK REVDAT 5 21-DEC-22 1UDZ 1 SEQADV REVDAT 4 16-OCT-19 1UDZ 1 REMARK REVDAT 3 24-FEB-09 1UDZ 1 VERSN REVDAT 2 05-SEP-06 1UDZ 1 TITLE AUTHOR KEYWDS REMARK REVDAT 1 23-MAR-04 1UDZ 0 JRNL AUTH R.FUKUNAGA,S.FUKAI,R.ISHITANI,O.NUREKI,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURES OF THE CP1 DOMAIN FROM THERMUS JRNL TITL 2 THERMOPHILUS ISOLEUCYL-TRNA SYNTHETASE AND ITS COMPLEX WITH JRNL TITL 3 L-VALINE. JRNL REF J.BIOL.CHEM. V. 279 8396 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14672940 JRNL DOI 10.1074/JBC.M312830200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2391031.130 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 41765 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2083 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6459 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 324 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2806 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.34000 REMARK 3 B22 (A**2) : 3.34000 REMARK 3 B33 (A**2) : -6.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.380 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 5.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.120 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 8.070 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 10.710; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 61.92 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UDZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000005715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41823 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 15.80 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 45.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.28200 REMARK 200 R SYM FOR SHELL (I) : 0.28200 REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: CP1 DOMAIN OF THE FULL-LENGTH T. THERMOPHILUS REMARK 200 ILERS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE,2-PROPANOL, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.91700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.36950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.36950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.95850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.36950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.36950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.87550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.36950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.36950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 20.95850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.36950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.36950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.87550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.91700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 486 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 463 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 200 REMARK 465 GLN A 201 REMARK 465 ASP A 202 REMARK 465 MET B 200 REMARK 465 GLN B 201 REMARK 465 ASP B 202 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 496 O HOH A 505 1.95 REMARK 500 OD1 ASP B 255 O HOH B 409 2.00 REMARK 500 O HOH B 477 O HOH B 501 2.03 REMARK 500 O HOH B 382 O HOH B 465 2.07 REMARK 500 O HOH A 497 O HOH A 503 2.15 REMARK 500 O HOH A 460 O HOH A 507 2.16 REMARK 500 N PRO A 203 O HOH A 498 2.17 REMARK 500 O HOH B 396 O HOH B 442 2.18 REMARK 500 OE1 GLU A 345 O HOH A 464 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 505 O HOH B 403 5545 1.92 REMARK 500 O HOH A 505 O HOH B 490 5545 2.03 REMARK 500 O HOH A 502 O HOH B 403 5545 2.06 REMARK 500 O HOH A 492 O HOH B 403 5545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 373 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 373 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 373 NE - CZ - NH1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 373 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 216 -6.05 -56.31 REMARK 500 PRO A 353 30.47 -95.73 REMARK 500 PHE B 324 -103.50 -111.21 REMARK 500 ASP B 344 -168.59 -77.46 REMARK 500 PRO B 353 32.64 -96.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 494 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH B 486 DISTANCE = 6.69 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UE0 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH L-VALINE REMARK 900 RELATED ID: TTK003000883.2 RELATED DB: TARGETDB DBREF 1UDZ A 201 381 UNP P56690 SYI_THET8 201 381 DBREF 1UDZ B 201 381 UNP P56690 SYI_THET8 201 381 SEQADV 1UDZ MET A 200 UNP P56690 INITIATING METHIONINE SEQADV 1UDZ PRO A 274 UNP P56690 GLN 274 SEE REMARK 999 SEQADV 1UDZ PHE A 375 UNP P56690 LEU 375 SEE REMARK 999 SEQADV 1UDZ MET B 200 UNP P56690 INITIATING METHIONINE SEQADV 1UDZ PRO B 274 UNP P56690 GLN 274 SEE REMARK 999 SEQADV 1UDZ PHE B 375 UNP P56690 LEU 375 SEE REMARK 999 SEQRES 1 A 182 MET GLN ASP PRO SER VAL TYR VAL ARG PHE PRO LEU LYS SEQRES 2 A 182 GLU PRO LYS LYS LEU GLY LEU GLU LYS ALA SER LEU LEU SEQRES 3 A 182 ILE TRP THR THR THR PRO TRP THR LEU PRO GLY ASN VAL SEQRES 4 A 182 ALA ALA ALA VAL HIS PRO GLU TYR THR TYR ALA ALA PHE SEQRES 5 A 182 GLN VAL GLY ASP GLU ALA LEU ILE LEU GLU GLU GLY LEU SEQRES 6 A 182 GLY ARG LYS LEU LEU GLY GLU GLY THR PRO VAL LEU LYS SEQRES 7 A 182 THR PHE PRO GLY LYS ALA LEU GLU GLY LEU PRO TYR THR SEQRES 8 A 182 PRO PRO TYR PRO GLN ALA LEU GLU LYS GLY TYR PHE VAL SEQRES 9 A 182 VAL LEU ALA ASP TYR VAL SER GLN GLU ASP GLY THR GLY SEQRES 10 A 182 ILE VAL HIS GLN ALA PRO ALA PHE GLY ALA GLU ASP LEU SEQRES 11 A 182 GLU THR ALA ARG VAL TYR GLY LEU PRO LEU LEU LYS THR SEQRES 12 A 182 VAL ASP GLU GLU GLY LYS LEU LEU VAL GLU PRO PHE LYS SEQRES 13 A 182 GLY LEU TYR PHE ARG GLU ALA ASN ARG ALA ILE LEU ARG SEQRES 14 A 182 ASP LEU ARG GLY ARG GLY PHE LEU PHE LYS GLU GLU SER SEQRES 1 B 182 MET GLN ASP PRO SER VAL TYR VAL ARG PHE PRO LEU LYS SEQRES 2 B 182 GLU PRO LYS LYS LEU GLY LEU GLU LYS ALA SER LEU LEU SEQRES 3 B 182 ILE TRP THR THR THR PRO TRP THR LEU PRO GLY ASN VAL SEQRES 4 B 182 ALA ALA ALA VAL HIS PRO GLU TYR THR TYR ALA ALA PHE SEQRES 5 B 182 GLN VAL GLY ASP GLU ALA LEU ILE LEU GLU GLU GLY LEU SEQRES 6 B 182 GLY ARG LYS LEU LEU GLY GLU GLY THR PRO VAL LEU LYS SEQRES 7 B 182 THR PHE PRO GLY LYS ALA LEU GLU GLY LEU PRO TYR THR SEQRES 8 B 182 PRO PRO TYR PRO GLN ALA LEU GLU LYS GLY TYR PHE VAL SEQRES 9 B 182 VAL LEU ALA ASP TYR VAL SER GLN GLU ASP GLY THR GLY SEQRES 10 B 182 ILE VAL HIS GLN ALA PRO ALA PHE GLY ALA GLU ASP LEU SEQRES 11 B 182 GLU THR ALA ARG VAL TYR GLY LEU PRO LEU LEU LYS THR SEQRES 12 B 182 VAL ASP GLU GLU GLY LYS LEU LEU VAL GLU PRO PHE LYS SEQRES 13 B 182 GLY LEU TYR PHE ARG GLU ALA ASN ARG ALA ILE LEU ARG SEQRES 14 B 182 ASP LEU ARG GLY ARG GLY PHE LEU PHE LYS GLU GLU SER FORMUL 3 HOH *251(H2 O) HELIX 1 1 GLU A 213 GLY A 218 5 6 HELIX 2 2 THR A 230 ASN A 237 5 8 HELIX 3 3 GLU A 262 GLY A 270 1 9 HELIX 4 4 LYS A 282 GLU A 285 5 4 HELIX 5 5 ALA A 321 PHE A 324 5 4 HELIX 6 6 GLY A 325 TYR A 335 1 11 HELIX 7 7 TYR A 358 ARG A 373 1 16 HELIX 8 8 GLU B 213 GLY B 218 5 6 HELIX 9 9 THR B 230 ASN B 237 5 8 HELIX 10 10 GLU B 262 GLY B 270 1 9 HELIX 11 11 LYS B 282 GLU B 285 5 4 HELIX 12 12 GLY B 325 GLY B 336 1 12 HELIX 13 13 TYR B 358 ARG B 373 1 16 SHEET 1 A 6 VAL A 275 PRO A 280 0 SHEET 2 A 6 THR A 247 VAL A 253 -1 N TYR A 248 O PHE A 279 SHEET 3 A 6 GLU A 256 GLU A 261 -1 O GLU A 256 N VAL A 253 SHEET 4 A 6 ALA A 222 THR A 228 1 N SER A 223 O ILE A 259 SHEET 5 A 6 SER A 204 PRO A 210 -1 N PHE A 209 O LEU A 224 SHEET 6 A 6 LEU A 376 GLU A 380 -1 O LYS A 378 N TYR A 206 SHEET 1 B 3 VAL A 303 LEU A 305 0 SHEET 2 B 3 ALA A 239 VAL A 242 1 N VAL A 242 O VAL A 304 SHEET 3 B 3 ILE A 317 GLN A 320 -1 O VAL A 318 N ALA A 241 SHEET 1 C 6 VAL B 275 PRO B 280 0 SHEET 2 C 6 THR B 247 VAL B 253 -1 N ALA B 250 O LEU B 276 SHEET 3 C 6 GLU B 256 GLU B 261 -1 O LEU B 258 N PHE B 251 SHEET 4 C 6 ALA B 222 THR B 228 1 N SER B 223 O ILE B 259 SHEET 5 C 6 SER B 204 PRO B 210 -1 N PHE B 209 O LEU B 224 SHEET 6 C 6 LEU B 376 GLU B 380 -1 O GLU B 380 N SER B 204 SHEET 1 D 3 VAL B 303 LEU B 305 0 SHEET 2 D 3 ALA B 239 VAL B 242 1 N VAL B 242 O VAL B 304 SHEET 3 D 3 VAL B 318 GLN B 320 -1 O VAL B 318 N ALA B 241 CISPEP 1 GLU A 352 PRO A 353 0 0.68 CISPEP 2 GLU B 352 PRO B 353 0 0.56 CRYST1 102.739 102.739 83.834 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009733 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009733 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011928 0.00000