HEADER ISOMERASE 26-JUL-03 1UJ6 TITLE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE TITLE 2 COMPLEXED WITH ARABINOSE-5-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSE 5-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS ENZYME-INHIBITOR COMPLEX, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.HAMADA,H.AGO,M.SUGAHARA,Y.NODAKE,S.KURAMITSU,S.YOKOYAMA,M.MIYANO, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 20-NOV-24 1UJ6 1 REMARK REVDAT 4 27-DEC-23 1UJ6 1 REMARK LINK REVDAT 3 13-JUL-11 1UJ6 1 VERSN REVDAT 2 24-FEB-09 1UJ6 1 VERSN REVDAT 1 13-JUL-04 1UJ6 0 JRNL AUTH K.HAMADA,H.AGO,M.SUGAHARA,Y.NODAKE,S.KURAMITSU,M.MIYANO JRNL TITL OXYANION HOLE-STABILIZED STEREOSPECIFIC ISOMERIZATION IN JRNL TITL 2 RIBOSE-5-PHOSPHATE ISOMERASE (RPI) JRNL REF J.BIOL.CHEM. V. 278 49183 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 13679361 JRNL DOI 10.1074/JBC.M309272200 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1773313.180 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 26639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2642 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3870 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 440 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1671 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.26000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : 2.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.990 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.550 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.030 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.040 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 54.86 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : A5P.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : A5P.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UJ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000005882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL45XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26688 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, TRIS, LICL, ARABINOSE-5 REMARK 280 -PHOSPHATE, PH 8.4, LIQUID DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.62700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.62700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.17450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.27050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.17450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.27050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.62700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.17450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 31.27050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.62700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.17450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 31.27050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 65.62700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1301 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 3 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 223 OE1 GLU A 223 4565 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 158 58.53 36.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A5P A 228 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UJ4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE APO FORM REMARK 900 RELATED ID: 1UJ5 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMLEX WITH RIBOSE-5-PHOSPHATE REMARK 900 RELATED ID: TTK003000500.3 RELATED DB: TARGETDB DBREF 1UJ6 A 1 227 UNP Q72J47 Q72J47_THET2 1 227 SEQRES 1 A 227 MET GLU ARG PRO LEU GLU SER TYR LYS LYS GLU ALA ALA SEQRES 2 A 227 HIS ALA ALA ILE ALA TYR VAL GLN ASP GLY MSE VAL VAL SEQRES 3 A 227 GLY LEU GLY THR GLY SER THR ALA ARG TYR ALA VAL LEU SEQRES 4 A 227 GLU LEU ALA ARG ARG LEU ARG GLU GLY GLU LEU LYS GLY SEQRES 5 A 227 VAL VAL GLY VAL PRO THR SER ARG ALA THR GLU GLU LEU SEQRES 6 A 227 ALA LYS ARG GLU GLY ILE PRO LEU VAL ASP LEU PRO PRO SEQRES 7 A 227 GLU GLY VAL ASP LEU ALA ILE ASP GLY ALA ASP GLU ILE SEQRES 8 A 227 ALA PRO GLY LEU ALA LEU ILE LYS GLY MSE GLY GLY ALA SEQRES 9 A 227 LEU LEU ARG GLU LYS ILE VAL GLU ARG VAL ALA LYS GLU SEQRES 10 A 227 PHE ILE VAL ILE ALA ASP HIS THR LYS LYS VAL PRO VAL SEQRES 11 A 227 LEU GLY ARG GLY PRO VAL PRO VAL GLU ILE VAL PRO PHE SEQRES 12 A 227 GLY TYR ARG ALA THR LEU LYS ALA ILE ALA ASP LEU GLY SEQRES 13 A 227 GLY GLU PRO GLU LEU ARG MSE ASP GLY ASP GLU PHE TYR SEQRES 14 A 227 PHE THR ASP GLY GLY HIS LEU ILE ALA ASP CYS ARG PHE SEQRES 15 A 227 GLY PRO ILE GLY ASP PRO LEU GLY LEU HIS ARG ALA LEU SEQRES 16 A 227 LEU GLU ILE PRO GLY VAL VAL GLU THR GLY LEU PHE VAL SEQRES 17 A 227 GLY MSE ALA THR ARG ALA LEU VAL ALA GLY PRO PHE GLY SEQRES 18 A 227 VAL GLU GLU LEU LEU PRO MODRES 1UJ6 MSE A 24 MET SELENOMETHIONINE MODRES 1UJ6 MSE A 101 MET SELENOMETHIONINE MODRES 1UJ6 MSE A 163 MET SELENOMETHIONINE MODRES 1UJ6 MSE A 210 MET SELENOMETHIONINE HET MSE A 24 8 HET MSE A 101 8 HET MSE A 163 8 HET MSE A 210 8 HET CL A 300 1 HET CL A 301 1 HET A5P A 228 14 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM A5P ARABINOSE-5-PHOSPHATE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 CL 2(CL 1-) FORMUL 4 A5P C5 H13 O8 P FORMUL 5 HOH *310(H2 O) HELIX 1 1 LEU A 5 ALA A 18 1 14 HELIX 2 2 GLY A 31 GLU A 47 1 17 HELIX 3 3 SER A 59 GLU A 69 1 11 HELIX 4 4 PRO A 93 LEU A 95 5 3 HELIX 5 5 ALA A 104 VAL A 114 1 11 HELIX 6 6 THR A 125 LYS A 127 5 3 HELIX 7 7 GLY A 144 ASP A 154 1 11 HELIX 8 8 ASP A 187 GLU A 197 1 11 SHEET 1 A 6 VAL A 54 PRO A 57 0 SHEET 2 A 6 VAL A 25 LEU A 28 1 N VAL A 26 O VAL A 54 SHEET 3 A 6 VAL A 81 ASP A 86 1 O LEU A 83 N GLY A 27 SHEET 4 A 6 ALA A 115 ASP A 123 1 O ILE A 119 N ALA A 84 SHEET 5 A 6 ARG A 213 GLY A 218 1 O LEU A 215 N VAL A 120 SHEET 6 A 6 GLY A 221 LEU A 225 -1 O LEU A 225 N ALA A 214 SHEET 1 B 3 GLU A 90 ALA A 92 0 SHEET 2 B 3 ALA A 96 ILE A 98 -1 O ALA A 96 N ALA A 92 SHEET 3 B 3 LEU A 206 PHE A 207 -1 O PHE A 207 N LEU A 97 SHEET 1 C 4 PRO A 159 LEU A 161 0 SHEET 2 C 4 LEU A 176 CYS A 180 -1 O ASP A 179 N GLU A 160 SHEET 3 C 4 VAL A 136 ILE A 140 -1 N ILE A 140 O LEU A 176 SHEET 4 C 4 VAL A 201 THR A 204 -1 O VAL A 202 N GLU A 139 SHEET 1 D 2 MSE A 163 ASP A 164 0 SHEET 2 D 2 GLU A 167 PHE A 168 -1 O GLU A 167 N ASP A 164 LINK C GLY A 23 N MSE A 24 1555 1555 1.32 LINK C MSE A 24 N VAL A 25 1555 1555 1.33 LINK C GLY A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N GLY A 102 1555 1555 1.33 LINK C ARG A 162 N MSE A 163 1555 1555 1.33 LINK C MSE A 163 N ASP A 164 1555 1555 1.33 LINK C GLY A 209 N MSE A 210 1555 1555 1.33 LINK C MSE A 210 N ALA A 211 1555 1555 1.33 SITE 1 AC1 6 ARG A 107 VAL A 141 PRO A 142 PHE A 143 SITE 2 AC1 6 HOH A1255 HOH A1274 SITE 1 AC2 4 LEU A 76 GLY A 144 HOH A1091 HOH A1093 SITE 1 AC3 20 THR A 30 SER A 32 THR A 33 ASP A 86 SITE 2 AC3 20 GLY A 87 ASP A 89 LYS A 99 GLY A 100 SITE 3 AC3 20 MSE A 101 GLY A 102 GLY A 103 ALA A 104 SITE 4 AC3 20 GLU A 108 LYS A 126 HOH A1005 HOH A1009 SITE 5 AC3 20 HOH A1040 HOH A1149 HOH A1177 HOH A1303 CRYST1 62.349 62.541 131.254 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016039 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015990 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007619 0.00000