data_1UKY # _entry.id 1UKY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1UKY pdb_00001uky 10.2210/pdb1uky/pdb WWPDB D_1000176946 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-01-26 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-06-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1UKY _pdbx_database_status.recvd_initial_deposition_date 1994-07-13 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mueller-Dieckmann, H.-J.' 1 'Schulz, G.E.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase.' J.Mol.Biol. 246 522 530 1995 JMOBAK UK 0022-2836 0070 ? 7877173 10.1006/jmbi.1994.0104 1 'The Structure of Uridylate Kinase with its Substrates, Showing the Transition State Geometry' J.Mol.Biol. 236 361 ? 1994 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Muller-Dieckmann, H.J.' 1 ? primary 'Schulz, G.E.' 2 ? 1 'Mueller-Dieckmann, H.-J.' 3 ? 1 'Schulz, G.E.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'URIDYLATE KINASE' 22834.020 1 2.7.4.- ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 2 ? ? ? ? 3 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TAATTSQPAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEIT LALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFN TFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRDSL ; _entity_poly.pdbx_seq_one_letter_code_can ;TAATTSQPAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEIT LALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFN TFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRDSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ALA n 1 3 ALA n 1 4 THR n 1 5 THR n 1 6 SER n 1 7 GLN n 1 8 PRO n 1 9 ALA n 1 10 PHE n 1 11 SER n 1 12 PRO n 1 13 ASP n 1 14 GLN n 1 15 VAL n 1 16 SER n 1 17 VAL n 1 18 ILE n 1 19 PHE n 1 20 VAL n 1 21 LEU n 1 22 GLY n 1 23 GLY n 1 24 PRO n 1 25 GLY n 1 26 ALA n 1 27 GLY n 1 28 LYS n 1 29 GLY n 1 30 THR n 1 31 GLN n 1 32 CYS n 1 33 GLU n 1 34 LYS n 1 35 LEU n 1 36 VAL n 1 37 LYS n 1 38 ASP n 1 39 TYR n 1 40 SER n 1 41 PHE n 1 42 VAL n 1 43 HIS n 1 44 LEU n 1 45 SER n 1 46 ALA n 1 47 GLY n 1 48 ASP n 1 49 LEU n 1 50 LEU n 1 51 ARG n 1 52 ALA n 1 53 GLU n 1 54 GLN n 1 55 GLY n 1 56 ARG n 1 57 ALA n 1 58 GLY n 1 59 SER n 1 60 GLN n 1 61 TYR n 1 62 GLY n 1 63 GLU n 1 64 LEU n 1 65 ILE n 1 66 LYS n 1 67 ASN n 1 68 CYS n 1 69 ILE n 1 70 LYS n 1 71 GLU n 1 72 GLY n 1 73 GLN n 1 74 ILE n 1 75 VAL n 1 76 PRO n 1 77 GLN n 1 78 GLU n 1 79 ILE n 1 80 THR n 1 81 LEU n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 ARG n 1 86 ASN n 1 87 ALA n 1 88 ILE n 1 89 SER n 1 90 ASP n 1 91 ASN n 1 92 VAL n 1 93 LYS n 1 94 ALA n 1 95 ASN n 1 96 LYS n 1 97 HIS n 1 98 LYS n 1 99 PHE n 1 100 LEU n 1 101 ILE n 1 102 ASP n 1 103 GLY n 1 104 PHE n 1 105 PRO n 1 106 ARG n 1 107 LYS n 1 108 MET n 1 109 ASP n 1 110 GLN n 1 111 ALA n 1 112 ILE n 1 113 SER n 1 114 PHE n 1 115 GLU n 1 116 ARG n 1 117 ASP n 1 118 ILE n 1 119 VAL n 1 120 GLU n 1 121 SER n 1 122 LYS n 1 123 PHE n 1 124 ILE n 1 125 LEU n 1 126 PHE n 1 127 PHE n 1 128 ASP n 1 129 CYS n 1 130 PRO n 1 131 GLU n 1 132 ASP n 1 133 ILE n 1 134 MET n 1 135 LEU n 1 136 GLU n 1 137 ARG n 1 138 LEU n 1 139 LEU n 1 140 GLU n 1 141 ARG n 1 142 GLY n 1 143 LYS n 1 144 THR n 1 145 SER n 1 146 GLY n 1 147 ARG n 1 148 SER n 1 149 ASP n 1 150 ASP n 1 151 ASN n 1 152 ILE n 1 153 GLU n 1 154 SER n 1 155 ILE n 1 156 LYS n 1 157 LYS n 1 158 ARG n 1 159 PHE n 1 160 ASN n 1 161 THR n 1 162 PHE n 1 163 LYS n 1 164 GLU n 1 165 THR n 1 166 SER n 1 167 MET n 1 168 PRO n 1 169 VAL n 1 170 ILE n 1 171 GLU n 1 172 TYR n 1 173 PHE n 1 174 GLU n 1 175 THR n 1 176 LYS n 1 177 SER n 1 178 LYS n 1 179 VAL n 1 180 VAL n 1 181 ARG n 1 182 VAL n 1 183 ARG n 1 184 CYS n 1 185 ASP n 1 186 ARG n 1 187 SER n 1 188 VAL n 1 189 GLU n 1 190 ASP n 1 191 VAL n 1 192 TYR n 1 193 LYS n 1 194 ASP n 1 195 VAL n 1 196 GLN n 1 197 ASP n 1 198 ALA n 1 199 ILE n 1 200 ARG n 1 201 ASP n 1 202 SER n 1 203 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 2 ? ? ? A . n A 1 2 ALA 2 3 ? ? ? A . n A 1 3 ALA 3 4 ? ? ? A . n A 1 4 THR 4 5 ? ? ? A . n A 1 5 THR 5 6 ? ? ? A . n A 1 6 SER 6 7 ? ? ? A . n A 1 7 GLN 7 8 ? ? ? A . n A 1 8 PRO 8 9 9 PRO PRO A . n A 1 9 ALA 9 10 10 ALA ALA A . n A 1 10 PHE 10 11 11 PHE PHE A . n A 1 11 SER 11 12 12 SER SER A . n A 1 12 PRO 12 13 13 PRO PRO A . n A 1 13 ASP 13 14 14 ASP ASP A . n A 1 14 GLN 14 15 15 GLN GLN A . n A 1 15 VAL 15 16 16 VAL VAL A . n A 1 16 SER 16 17 17 SER SER A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 ILE 18 19 19 ILE ILE A . n A 1 19 PHE 19 20 20 PHE PHE A . n A 1 20 VAL 20 21 21 VAL VAL A . n A 1 21 LEU 21 22 22 LEU LEU A . n A 1 22 GLY 22 23 23 GLY GLY A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 PRO 24 25 25 PRO PRO A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 ALA 26 27 27 ALA ALA A . n A 1 27 GLY 27 28 28 GLY GLY A . n A 1 28 LYS 28 29 29 LYS LYS A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 THR 30 31 31 THR THR A . n A 1 31 GLN 31 32 32 GLN GLN A . n A 1 32 CYS 32 33 33 CYS CYS A . n A 1 33 GLU 33 34 34 GLU GLU A . n A 1 34 LYS 34 35 35 LYS LYS A . n A 1 35 LEU 35 36 36 LEU LEU A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 LYS 37 38 38 LYS LYS A . n A 1 38 ASP 38 39 39 ASP ASP A . n A 1 39 TYR 39 40 40 TYR TYR A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 PHE 41 42 42 PHE PHE A . n A 1 42 VAL 42 43 43 VAL VAL A . n A 1 43 HIS 43 44 44 HIS HIS A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 SER 45 46 46 SER SER A . n A 1 46 ALA 46 47 47 ALA ALA A . n A 1 47 GLY 47 48 48 GLY GLY A . n A 1 48 ASP 48 49 49 ASP ASP A . n A 1 49 LEU 49 50 50 LEU LEU A . n A 1 50 LEU 50 51 51 LEU LEU A . n A 1 51 ARG 51 52 52 ARG ARG A . n A 1 52 ALA 52 53 53 ALA ALA A . n A 1 53 GLU 53 54 54 GLU GLU A . n A 1 54 GLN 54 55 55 GLN GLN A . n A 1 55 GLY 55 56 56 GLY GLY A . n A 1 56 ARG 56 57 57 ARG ARG A . n A 1 57 ALA 57 58 58 ALA ALA A . n A 1 58 GLY 58 59 59 GLY GLY A . n A 1 59 SER 59 60 60 SER SER A . n A 1 60 GLN 60 61 61 GLN GLN A . n A 1 61 TYR 61 62 62 TYR TYR A . n A 1 62 GLY 62 63 63 GLY GLY A . n A 1 63 GLU 63 64 64 GLU GLU A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 ILE 65 66 66 ILE ILE A . n A 1 66 LYS 66 67 67 LYS LYS A . n A 1 67 ASN 67 68 68 ASN ASN A . n A 1 68 CYS 68 69 69 CYS CYS A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 LYS 70 71 71 LYS LYS A . n A 1 71 GLU 71 72 72 GLU GLU A . n A 1 72 GLY 72 73 73 GLY GLY A . n A 1 73 GLN 73 74 74 GLN GLN A . n A 1 74 ILE 74 75 75 ILE ILE A . n A 1 75 VAL 75 76 76 VAL VAL A . n A 1 76 PRO 76 77 77 PRO PRO A . n A 1 77 GLN 77 78 78 GLN GLN A . n A 1 78 GLU 78 79 79 GLU GLU A . n A 1 79 ILE 79 80 80 ILE ILE A . n A 1 80 THR 80 81 81 THR THR A . n A 1 81 LEU 81 82 82 LEU LEU A . n A 1 82 ALA 82 83 83 ALA ALA A . n A 1 83 LEU 83 84 84 LEU LEU A . n A 1 84 LEU 84 85 85 LEU LEU A . n A 1 85 ARG 85 86 86 ARG ARG A . n A 1 86 ASN 86 87 87 ASN ASN A . n A 1 87 ALA 87 88 88 ALA ALA A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 SER 89 90 90 SER SER A . n A 1 90 ASP 90 91 91 ASP ASP A . n A 1 91 ASN 91 92 92 ASN ASN A . n A 1 92 VAL 92 93 93 VAL VAL A . n A 1 93 LYS 93 94 94 LYS LYS A . n A 1 94 ALA 94 95 95 ALA ALA A . n A 1 95 ASN 95 96 96 ASN ASN A . n A 1 96 LYS 96 97 97 LYS LYS A . n A 1 97 HIS 97 98 98 HIS HIS A . n A 1 98 LYS 98 99 99 LYS LYS A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 ILE 101 102 102 ILE ILE A . n A 1 102 ASP 102 103 103 ASP ASP A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 PHE 104 105 105 PHE PHE A . n A 1 105 PRO 105 106 106 PRO PRO A . n A 1 106 ARG 106 107 107 ARG ARG A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 MET 108 109 109 MET MET A . n A 1 109 ASP 109 110 110 ASP ASP A . n A 1 110 GLN 110 111 111 GLN GLN A . n A 1 111 ALA 111 112 112 ALA ALA A . n A 1 112 ILE 112 113 113 ILE ILE A . n A 1 113 SER 113 114 114 SER SER A . n A 1 114 PHE 114 115 115 PHE PHE A . n A 1 115 GLU 115 116 116 GLU GLU A . n A 1 116 ARG 116 117 117 ARG ARG A . n A 1 117 ASP 117 118 118 ASP ASP A . n A 1 118 ILE 118 119 119 ILE ILE A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 GLU 120 121 121 GLU GLU A . n A 1 121 SER 121 122 122 SER SER A . n A 1 122 LYS 122 123 123 LYS LYS A . n A 1 123 PHE 123 124 124 PHE PHE A . n A 1 124 ILE 124 125 125 ILE ILE A . n A 1 125 LEU 125 126 126 LEU LEU A . n A 1 126 PHE 126 127 127 PHE PHE A . n A 1 127 PHE 127 128 128 PHE PHE A . n A 1 128 ASP 128 129 129 ASP ASP A . n A 1 129 CYS 129 130 130 CYS CYS A . n A 1 130 PRO 130 131 131 PRO PRO A . n A 1 131 GLU 131 132 132 GLU GLU A . n A 1 132 ASP 132 133 133 ASP ASP A . n A 1 133 ILE 133 134 134 ILE ILE A . n A 1 134 MET 134 135 135 MET MET A . n A 1 135 LEU 135 136 136 LEU LEU A . n A 1 136 GLU 136 137 137 GLU GLU A . n A 1 137 ARG 137 138 138 ARG ARG A . n A 1 138 LEU 138 139 139 LEU LEU A . n A 1 139 LEU 139 140 140 LEU LEU A . n A 1 140 GLU 140 141 141 GLU GLU A . n A 1 141 ARG 141 142 142 ARG ARG A . n A 1 142 GLY 142 143 143 GLY GLY A . n A 1 143 LYS 143 144 144 LYS LYS A . n A 1 144 THR 144 145 145 THR THR A . n A 1 145 SER 145 146 146 SER SER A . n A 1 146 GLY 146 147 147 GLY GLY A . n A 1 147 ARG 147 148 148 ARG ARG A . n A 1 148 SER 148 149 149 SER SER A . n A 1 149 ASP 149 150 150 ASP ASP A . n A 1 150 ASP 150 151 151 ASP ASP A . n A 1 151 ASN 151 152 152 ASN ASN A . n A 1 152 ILE 152 153 153 ILE ILE A . n A 1 153 GLU 153 154 154 GLU GLU A . n A 1 154 SER 154 155 155 SER SER A . n A 1 155 ILE 155 156 156 ILE ILE A . n A 1 156 LYS 156 157 157 LYS LYS A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 ARG 158 159 159 ARG ARG A . n A 1 159 PHE 159 160 160 PHE PHE A . n A 1 160 ASN 160 161 161 ASN ASN A . n A 1 161 THR 161 162 162 THR THR A . n A 1 162 PHE 162 163 163 PHE PHE A . n A 1 163 LYS 163 164 164 LYS LYS A . n A 1 164 GLU 164 165 165 GLU GLU A . n A 1 165 THR 165 166 166 THR THR A . n A 1 166 SER 166 167 167 SER SER A . n A 1 167 MET 167 168 168 MET MET A . n A 1 168 PRO 168 169 169 PRO PRO A . n A 1 169 VAL 169 170 170 VAL VAL A . n A 1 170 ILE 170 171 171 ILE ILE A . n A 1 171 GLU 171 172 172 GLU GLU A . n A 1 172 TYR 172 173 173 TYR TYR A . n A 1 173 PHE 173 174 174 PHE PHE A . n A 1 174 GLU 174 175 175 GLU GLU A . n A 1 175 THR 175 176 176 THR THR A . n A 1 176 LYS 176 177 177 LYS LYS A . n A 1 177 SER 177 178 178 SER SER A . n A 1 178 LYS 178 179 179 LYS LYS A . n A 1 179 VAL 179 180 180 VAL VAL A . n A 1 180 VAL 180 181 181 VAL VAL A . n A 1 181 ARG 181 182 182 ARG ARG A . n A 1 182 VAL 182 183 183 VAL VAL A . n A 1 183 ARG 183 184 184 ARG ARG A . n A 1 184 CYS 184 185 185 CYS CYS A . n A 1 185 ASP 185 186 186 ASP ASP A . n A 1 186 ARG 186 187 187 ARG ARG A . n A 1 187 SER 187 188 188 SER SER A . n A 1 188 VAL 188 189 189 VAL VAL A . n A 1 189 GLU 189 190 190 GLU GLU A . n A 1 190 ASP 190 191 191 ASP ASP A . n A 1 191 VAL 191 192 192 VAL VAL A . n A 1 192 TYR 192 193 193 TYR TYR A . n A 1 193 LYS 193 194 194 LYS LYS A . n A 1 194 ASP 194 195 195 ASP ASP A . n A 1 195 VAL 195 196 196 VAL VAL A . n A 1 196 GLN 196 197 197 GLN GLN A . n A 1 197 ASP 197 198 198 ASP ASP A . n A 1 198 ALA 198 199 199 ALA ALA A . n A 1 199 ILE 199 200 200 ILE ILE A . n A 1 200 ARG 200 201 201 ARG ARG A . n A 1 201 ASP 201 202 202 ASP ASP A . n A 1 202 SER 202 203 203 SER SER A . n A 1 203 LEU 203 204 204 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 205 205 ADP ADP A . C 2 ADP 1 206 206 ADP ADP A . D 3 HOH 1 301 301 HOH HOH A . D 3 HOH 2 302 302 HOH HOH A . D 3 HOH 3 303 303 HOH HOH A . D 3 HOH 4 304 304 HOH HOH A . D 3 HOH 5 305 305 HOH HOH A . D 3 HOH 6 306 306 HOH HOH A . D 3 HOH 7 307 307 HOH HOH A . D 3 HOH 8 308 308 HOH HOH A . D 3 HOH 9 309 309 HOH HOH A . D 3 HOH 10 310 310 HOH HOH A . D 3 HOH 11 311 311 HOH HOH A . D 3 HOH 12 312 312 HOH HOH A . D 3 HOH 13 313 313 HOH HOH A . D 3 HOH 14 314 314 HOH HOH A . D 3 HOH 15 315 315 HOH HOH A . D 3 HOH 16 316 316 HOH HOH A . D 3 HOH 17 317 317 HOH HOH A . D 3 HOH 18 318 318 HOH HOH A . D 3 HOH 19 319 319 HOH HOH A . D 3 HOH 20 320 320 HOH HOH A . D 3 HOH 21 321 321 HOH HOH A . D 3 HOH 22 322 322 HOH HOH A . D 3 HOH 23 323 323 HOH HOH A . D 3 HOH 24 324 324 HOH HOH A . D 3 HOH 25 325 325 HOH HOH A . D 3 HOH 26 326 326 HOH HOH A . D 3 HOH 27 327 327 HOH HOH A . D 3 HOH 28 328 328 HOH HOH A . D 3 HOH 29 329 329 HOH HOH A . D 3 HOH 30 330 330 HOH HOH A . D 3 HOH 31 331 331 HOH HOH A . D 3 HOH 32 332 332 HOH HOH A . D 3 HOH 33 333 333 HOH HOH A . D 3 HOH 34 334 334 HOH HOH A . D 3 HOH 35 335 335 HOH HOH A . D 3 HOH 36 336 336 HOH HOH A . D 3 HOH 37 337 337 HOH HOH A . D 3 HOH 38 338 338 HOH HOH A . D 3 HOH 39 339 339 HOH HOH A . D 3 HOH 40 340 340 HOH HOH A . D 3 HOH 41 341 341 HOH HOH A . D 3 HOH 42 342 342 HOH HOH A . D 3 HOH 43 343 343 HOH HOH A . D 3 HOH 44 344 344 HOH HOH A . D 3 HOH 45 345 345 HOH HOH A . D 3 HOH 46 346 346 HOH HOH A . D 3 HOH 47 347 347 HOH HOH A . D 3 HOH 48 348 348 HOH HOH A . D 3 HOH 49 349 349 HOH HOH A . D 3 HOH 50 350 350 HOH HOH A . D 3 HOH 51 351 351 HOH HOH A . D 3 HOH 52 352 352 HOH HOH A . D 3 HOH 53 353 353 HOH HOH A . D 3 HOH 54 354 354 HOH HOH A . D 3 HOH 55 355 355 HOH HOH A . D 3 HOH 56 356 356 HOH HOH A . D 3 HOH 57 357 357 HOH HOH A . D 3 HOH 58 358 358 HOH HOH A . D 3 HOH 59 359 359 HOH HOH A . D 3 HOH 60 360 360 HOH HOH A . D 3 HOH 61 361 361 HOH HOH A . D 3 HOH 62 362 362 HOH HOH A . D 3 HOH 63 363 363 HOH HOH A . D 3 HOH 64 364 364 HOH HOH A . D 3 HOH 65 365 365 HOH HOH A . D 3 HOH 66 366 366 HOH HOH A . D 3 HOH 67 367 367 HOH HOH A . D 3 HOH 68 368 368 HOH HOH A . D 3 HOH 69 369 369 HOH HOH A . D 3 HOH 70 370 370 HOH HOH A . D 3 HOH 71 371 371 HOH HOH A . D 3 HOH 72 372 372 HOH HOH A . D 3 HOH 73 373 373 HOH HOH A . D 3 HOH 74 374 374 HOH HOH A . D 3 HOH 75 375 375 HOH HOH A . D 3 HOH 76 376 376 HOH HOH A . D 3 HOH 77 377 377 HOH HOH A . D 3 HOH 78 378 378 HOH HOH A . D 3 HOH 79 379 379 HOH HOH A . D 3 HOH 80 380 380 HOH HOH A . D 3 HOH 81 381 381 HOH HOH A . D 3 HOH 82 382 382 HOH HOH A . D 3 HOH 83 383 383 HOH HOH A . D 3 HOH 84 384 384 HOH HOH A . D 3 HOH 85 385 385 HOH HOH A . D 3 HOH 86 386 386 HOH HOH A . D 3 HOH 87 387 387 HOH HOH A . D 3 HOH 88 388 388 HOH HOH A . D 3 HOH 89 389 389 HOH HOH A . D 3 HOH 90 390 390 HOH HOH A . D 3 HOH 91 391 391 HOH HOH A . D 3 HOH 92 392 392 HOH HOH A . D 3 HOH 93 393 393 HOH HOH A . D 3 HOH 94 394 394 HOH HOH A . D 3 HOH 95 395 395 HOH HOH A . D 3 HOH 96 396 396 HOH HOH A . D 3 HOH 97 397 397 HOH HOH A . D 3 HOH 98 398 398 HOH HOH A . D 3 HOH 99 399 399 HOH HOH A . D 3 HOH 100 400 400 HOH HOH A . D 3 HOH 101 401 401 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1UKY _cell.length_a 64.200 _cell.length_b 64.200 _cell.length_c 185.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UKY _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 1UKY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_percent_sol 48.95 _exptl_crystal.description ? # _refine.entry_id 1UKY _refine.ls_number_reflns_obs 12091 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10. _refine.ls_d_res_high 2.13 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.178 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.178 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1556 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 1711 _refine_hist.d_res_high 2.13 _refine_hist.d_res_low 10. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.10 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1UKY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1UKY _struct.title 'SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1UKY _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UMPK_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P15700 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MTAATTSQPAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEI TLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRF NTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRDSL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1UKY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 203 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15700 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 204 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 204 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 LYS A 28 ? ASP A 38 ? LYS A 29 ASP A 39 1 ? 11 HELX_P HELX_P2 H2 ALA A 46 ? GLY A 55 ? ALA A 47 GLY A 56 1 ? 10 HELX_P HELX_P3 H3 TYR A 61 ? ILE A 69 ? TYR A 62 ILE A 70 1 ? 9 HELX_P HELX_P4 H4 GLN A 77 ? VAL A 92 ? GLN A 78 VAL A 93 1 ? 16 HELX_P HELX_P5 H5 MET A 108 ? ILE A 118 ? MET A 109 ILE A 119 1 ? 11 HELX_P HELX_P6 H6 GLU A 131 ? SER A 145 ? GLU A 132 SER A 146 1 ? 15 HELX_P HELX_P7 H7 ILE A 152 ? SER A 166 ? ILE A 153 SER A 167 1 ? 15 HELX_P HELX_P8 H8 VAL A 169 ? GLU A 174 ? VAL A 170 GLU A 175 1 ? 6 HELX_P HELX_P9 H9 VAL A 188 ? ASP A 201 ? VAL A 189 ASP A 202 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 129 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 184 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 130 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 185 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.999 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 104 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 105 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 105 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 106 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.21 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 42 ? LEU A 44 ? VAL A 43 LEU A 45 A 2 LYS A 98 ? GLY A 103 ? LYS A 99 GLY A 104 A 3 SER A 16 ? LEU A 21 ? SER A 17 LEU A 22 A 4 PHE A 123 ? ASP A 128 ? PHE A 124 ASP A 129 A 5 LYS A 178 ? VAL A 182 ? LYS A 179 VAL A 183 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 42 ? N VAL A 43 O LYS A 98 ? O LYS A 99 A 2 3 N PHE A 99 ? N PHE A 100 O SER A 16 ? O SER A 17 A 3 4 N PHE A 19 ? N PHE A 20 O PHE A 123 ? O PHE A 124 A 4 5 N ILE A 124 ? N ILE A 125 O LYS A 178 ? O LYS A 179 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ADP 205 ? 19 'BINDING SITE FOR RESIDUE ADP A 205' AC2 Software A ADP 206 ? 21 'BINDING SITE FOR RESIDUE ADP A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 GLY A 25 ? GLY A 26 . ? 1_555 ? 2 AC1 19 ALA A 26 ? ALA A 27 . ? 1_555 ? 3 AC1 19 GLY A 27 ? GLY A 28 . ? 1_555 ? 4 AC1 19 LYS A 28 ? LYS A 29 . ? 1_555 ? 5 AC1 19 GLY A 29 ? GLY A 30 . ? 1_555 ? 6 AC1 19 THR A 30 ? THR A 31 . ? 1_555 ? 7 AC1 19 ARG A 137 ? ARG A 138 . ? 1_555 ? 8 AC1 19 ARG A 141 ? ARG A 142 . ? 1_555 ? 9 AC1 19 ARG A 186 ? ARG A 187 . ? 1_555 ? 10 AC1 19 SER A 187 ? SER A 188 . ? 1_555 ? 11 AC1 19 VAL A 188 ? VAL A 189 . ? 1_555 ? 12 AC1 19 ADP C . ? ADP A 206 . ? 1_555 ? 13 AC1 19 HOH D . ? HOH A 308 . ? 1_555 ? 14 AC1 19 HOH D . ? HOH A 309 . ? 1_555 ? 15 AC1 19 HOH D . ? HOH A 326 . ? 1_555 ? 16 AC1 19 HOH D . ? HOH A 339 . ? 1_555 ? 17 AC1 19 HOH D . ? HOH A 351 . ? 1_555 ? 18 AC1 19 HOH D . ? HOH A 361 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH A 377 . ? 1_555 ? 20 AC2 21 PRO A 24 ? PRO A 25 . ? 1_555 ? 21 AC2 21 LYS A 28 ? LYS A 29 . ? 1_555 ? 22 AC2 21 LEU A 50 ? LEU A 51 . ? 1_555 ? 23 AC2 21 ARG A 51 ? ARG A 52 . ? 1_555 ? 24 AC2 21 ILE A 69 ? ILE A 70 . ? 1_555 ? 25 AC2 21 GLN A 73 ? GLN A 74 . ? 1_555 ? 26 AC2 21 ILE A 74 ? ILE A 75 . ? 1_555 ? 27 AC2 21 VAL A 75 ? VAL A 76 . ? 1_555 ? 28 AC2 21 GLY A 103 ? GLY A 104 . ? 1_555 ? 29 AC2 21 PHE A 104 ? PHE A 105 . ? 1_555 ? 30 AC2 21 ARG A 106 ? ARG A 107 . ? 1_555 ? 31 AC2 21 GLN A 110 ? GLN A 111 . ? 1_555 ? 32 AC2 21 ARG A 141 ? ARG A 142 . ? 1_555 ? 33 AC2 21 ARG A 147 ? ARG A 148 . ? 1_555 ? 34 AC2 21 ARG A 158 ? ARG A 159 . ? 1_555 ? 35 AC2 21 ADP B . ? ADP A 205 . ? 1_555 ? 36 AC2 21 HOH D . ? HOH A 303 . ? 1_555 ? 37 AC2 21 HOH D . ? HOH A 313 . ? 1_555 ? 38 AC2 21 HOH D . ? HOH A 359 . ? 1_555 ? 39 AC2 21 HOH D . ? HOH A 375 . ? 1_555 ? 40 AC2 21 HOH D . ? HOH A 389 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 14 ? ? CA A ASP 14 ? ? C A ASP 14 ? ? 134.47 110.40 24.07 2.00 N 2 1 NE A ARG 57 ? ? CZ A ARG 57 ? ? NH2 A ARG 57 ? ? 116.84 120.30 -3.46 0.50 N 3 1 N A ASP 103 ? ? CA A ASP 103 ? ? CB A ASP 103 ? ? 99.28 110.60 -11.32 1.80 N 4 1 NE A ARG 117 ? ? CZ A ARG 117 ? ? NH1 A ARG 117 ? ? 123.83 120.30 3.53 0.50 N 5 1 NE A ARG 182 ? ? CZ A ARG 182 ? ? NH1 A ARG 182 ? ? 123.54 120.30 3.24 0.50 N 6 1 NE A ARG 187 ? ? CZ A ARG 187 ? ? NH1 A ARG 187 ? ? 124.19 120.30 3.89 0.50 N 7 1 NE A ARG 201 ? ? CZ A ARG 201 ? ? NH1 A ARG 201 ? ? 130.69 120.30 10.39 0.50 N 8 1 NE A ARG 201 ? ? CZ A ARG 201 ? ? NH2 A ARG 201 ? ? 112.35 120.30 -7.95 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 14 ? ? -55.87 -84.92 2 1 ASN A 96 ? ? 74.35 42.13 3 1 ILE A 119 ? ? -120.71 -71.78 4 1 THR A 145 ? ? -65.51 -74.24 5 1 ASP A 151 ? ? -91.46 57.86 6 1 ASP A 186 ? ? -82.34 40.07 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C1'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id ADP _pdbx_validate_chiral.auth_seq_id 205 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # _pdbx_entry_details.entry_id 1UKY _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE COMPLEX CONTAINS AN ADP AT THE ATP-BINDING SITE AND A MIXTURE OF ADP AND AMP AT THE NMP-BINDING SITE. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 2 ? A THR 1 2 1 Y 1 A ALA 3 ? A ALA 2 3 1 Y 1 A ALA 4 ? A ALA 3 4 1 Y 1 A THR 5 ? A THR 4 5 1 Y 1 A THR 6 ? A THR 5 6 1 Y 1 A SER 7 ? A SER 6 7 1 Y 1 A GLN 8 ? A GLN 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIS N N N N 179 HIS CA C N S 180 HIS C C N N 181 HIS O O N N 182 HIS CB C N N 183 HIS CG C Y N 184 HIS ND1 N Y N 185 HIS CD2 C Y N 186 HIS CE1 C Y N 187 HIS NE2 N Y N 188 HIS OXT O N N 189 HIS H H N N 190 HIS H2 H N N 191 HIS HA H N N 192 HIS HB2 H N N 193 HIS HB3 H N N 194 HIS HD1 H N N 195 HIS HD2 H N N 196 HIS HE1 H N N 197 HIS HE2 H N N 198 HIS HXT H N N 199 HOH O O N N 200 HOH H1 H N N 201 HOH H2 H N N 202 ILE N N N N 203 ILE CA C N S 204 ILE C C N N 205 ILE O O N N 206 ILE CB C N S 207 ILE CG1 C N N 208 ILE CG2 C N N 209 ILE CD1 C N N 210 ILE OXT O N N 211 ILE H H N N 212 ILE H2 H N N 213 ILE HA H N N 214 ILE HB H N N 215 ILE HG12 H N N 216 ILE HG13 H N N 217 ILE HG21 H N N 218 ILE HG22 H N N 219 ILE HG23 H N N 220 ILE HD11 H N N 221 ILE HD12 H N N 222 ILE HD13 H N N 223 ILE HXT H N N 224 LEU N N N N 225 LEU CA C N S 226 LEU C C N N 227 LEU O O N N 228 LEU CB C N N 229 LEU CG C N N 230 LEU CD1 C N N 231 LEU CD2 C N N 232 LEU OXT O N N 233 LEU H H N N 234 LEU H2 H N N 235 LEU HA H N N 236 LEU HB2 H N N 237 LEU HB3 H N N 238 LEU HG H N N 239 LEU HD11 H N N 240 LEU HD12 H N N 241 LEU HD13 H N N 242 LEU HD21 H N N 243 LEU HD22 H N N 244 LEU HD23 H N N 245 LEU HXT H N N 246 LYS N N N N 247 LYS CA C N S 248 LYS C C N N 249 LYS O O N N 250 LYS CB C N N 251 LYS CG C N N 252 LYS CD C N N 253 LYS CE C N N 254 LYS NZ N N N 255 LYS OXT O N N 256 LYS H H N N 257 LYS H2 H N N 258 LYS HA H N N 259 LYS HB2 H N N 260 LYS HB3 H N N 261 LYS HG2 H N N 262 LYS HG3 H N N 263 LYS HD2 H N N 264 LYS HD3 H N N 265 LYS HE2 H N N 266 LYS HE3 H N N 267 LYS HZ1 H N N 268 LYS HZ2 H N N 269 LYS HZ3 H N N 270 LYS HXT H N N 271 MET N N N N 272 MET CA C N S 273 MET C C N N 274 MET O O N N 275 MET CB C N N 276 MET CG C N N 277 MET SD S N N 278 MET CE C N N 279 MET OXT O N N 280 MET H H N N 281 MET H2 H N N 282 MET HA H N N 283 MET HB2 H N N 284 MET HB3 H N N 285 MET HG2 H N N 286 MET HG3 H N N 287 MET HE1 H N N 288 MET HE2 H N N 289 MET HE3 H N N 290 MET HXT H N N 291 PHE N N N N 292 PHE CA C N S 293 PHE C C N N 294 PHE O O N N 295 PHE CB C N N 296 PHE CG C Y N 297 PHE CD1 C Y N 298 PHE CD2 C Y N 299 PHE CE1 C Y N 300 PHE CE2 C Y N 301 PHE CZ C Y N 302 PHE OXT O N N 303 PHE H H N N 304 PHE H2 H N N 305 PHE HA H N N 306 PHE HB2 H N N 307 PHE HB3 H N N 308 PHE HD1 H N N 309 PHE HD2 H N N 310 PHE HE1 H N N 311 PHE HE2 H N N 312 PHE HZ H N N 313 PHE HXT H N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 THR N N N N 346 THR CA C N S 347 THR C C N N 348 THR O O N N 349 THR CB C N R 350 THR OG1 O N N 351 THR CG2 C N N 352 THR OXT O N N 353 THR H H N N 354 THR H2 H N N 355 THR HA H N N 356 THR HB H N N 357 THR HG1 H N N 358 THR HG21 H N N 359 THR HG22 H N N 360 THR HG23 H N N 361 THR HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TYR N CA sing N N 350 TYR N H sing N N 351 TYR N H2 sing N N 352 TYR CA C sing N N 353 TYR CA CB sing N N 354 TYR CA HA sing N N 355 TYR C O doub N N 356 TYR C OXT sing N N 357 TYR CB CG sing N N 358 TYR CB HB2 sing N N 359 TYR CB HB3 sing N N 360 TYR CG CD1 doub Y N 361 TYR CG CD2 sing Y N 362 TYR CD1 CE1 sing Y N 363 TYR CD1 HD1 sing N N 364 TYR CD2 CE2 doub Y N 365 TYR CD2 HD2 sing N N 366 TYR CE1 CZ doub Y N 367 TYR CE1 HE1 sing N N 368 TYR CE2 CZ sing Y N 369 TYR CE2 HE2 sing N N 370 TYR CZ OH sing N N 371 TYR OH HH sing N N 372 TYR OXT HXT sing N N 373 VAL N CA sing N N 374 VAL N H sing N N 375 VAL N H2 sing N N 376 VAL CA C sing N N 377 VAL CA CB sing N N 378 VAL CA HA sing N N 379 VAL C O doub N N 380 VAL C OXT sing N N 381 VAL CB CG1 sing N N 382 VAL CB CG2 sing N N 383 VAL CB HB sing N N 384 VAL CG1 HG11 sing N N 385 VAL CG1 HG12 sing N N 386 VAL CG1 HG13 sing N N 387 VAL CG2 HG21 sing N N 388 VAL CG2 HG22 sing N N 389 VAL CG2 HG23 sing N N 390 VAL OXT HXT sing N N 391 # _atom_sites.entry_id 1UKY _atom_sites.fract_transf_matrix[1][1] 0.015576 _atom_sites.fract_transf_matrix[1][2] 0.008993 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017986 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005405 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'CIS PROLINE - PRO 106' # loop_ _atom_type.symbol C N O P S # loop_