HEADER DNA-BINDING PROTEIN 19-SEP-03 1UOL TITLE CRYSTAL STRUCTURE OF THE HUMAN P53 CORE DOMAIN MUTANT TITLE 2 M133L/V203A/N239Y/N268D AT 1.9 A RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULAR TUMOR ANTIGEN P53; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA BINDING (CORE) DOMAIN, RESIDUES 94-312; COMPND 5 SYNONYM: TUMOR SUPPRESSOR P53, PHOSPHOPROTEIN P53, ANTIGEN COMPND 6 NY-CO-13; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA-BINDING PROTEIN, P53, DNA-BINDING DOMAIN, TUMOR KEYWDS 2 SUPPRESSOR, SECOND-SITE SUPPRESSOR MUTATION, SUPERSTABLE KEYWDS 3 MUTANT, APOPTOSIS, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.C.JOERGER,M.D.ALLEN,A.R.FERSHT REVDAT 3 24-FEB-09 1UOL 1 VERSN REVDAT 2 26-MAY-05 1UOL 1 JRNL REMARK HET LINK REVDAT 2 2 HETATM REVDAT 1 16-OCT-03 1UOL 0 JRNL AUTH A.C.JOERGER,M.D.ALLEN,A.R.FERSHT JRNL TITL CRYSTAL STRUCTURE OF A SUPERSTABLE MUTANT OF HUMAN JRNL TITL 2 P53 CORE DOMAIN. INSIGHTS INTO THE MECHANISM OF JRNL TITL 3 RESCUING ONCOGENIC MUTATIONS JRNL REF J.BIOL.CHEM. V. 279 1291 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14534297 JRNL DOI 10.1074/JBC.M309732200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.NIKOLOVA,J.HENKEL,D.P.LANE,A.R.FERSHT REMARK 1 TITL SEMIRATIONAL DESIGN OF ACTIVE TUMOR SUPPRESSOR P53 REMARK 1 TITL 2 DNA BINDING DOMAIN WITH ENHANCED STABILITY REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 95 14675 1998 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 9843948 REMARK 1 DOI 10.1073/PNAS.95.25.14675 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.CHO,S.GORINA,P.D.JEFFREY,N.P.PAVLETICH REMARK 1 TITL CRYSTAL STRUCTURE OF A P53 TUMOR SUPPRESSOR-DNA REMARK 1 TITL 2 COMPLEX: UNDERSTANDING TUMORIGENIC MUTATIONS REMARK 1 REF SCIENCE V. 265 346 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 8023157 REMARK 1 DOI 10.1126/SCIENCE.8023157 REMARK 2 REMARK 2 RESOLUTION. 1.9 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.9 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.6 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 38078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3072 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 391 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.4 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UOL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-SEP-03. REMARK 100 THE PDBE ID CODE IS EBI-13352. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.20 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38078 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 35.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.40000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.40000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED MUTATION MET 133 LEU, VAL 203 ALA, ASN 239 TYR REMARK 400 AND ASN 268 ASP IN CHAINS A AND B REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 94 REMARK 465 SER A 95 REMARK 465 LYS A 291 REMARK 465 LYS A 292 REMARK 465 GLY A 293 REMARK 465 GLU A 294 REMARK 465 PRO A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 GLU A 298 REMARK 465 LEU A 299 REMARK 465 PRO A 300 REMARK 465 PRO A 301 REMARK 465 GLY A 302 REMARK 465 SER A 303 REMARK 465 THR A 304 REMARK 465 LYS A 305 REMARK 465 ARG A 306 REMARK 465 ALA A 307 REMARK 465 LEU A 308 REMARK 465 PRO A 309 REMARK 465 ASN A 310 REMARK 465 ASN A 311 REMARK 465 THR A 312 REMARK 465 SER B 94 REMARK 465 SER B 95 REMARK 465 LYS B 291 REMARK 465 LYS B 292 REMARK 465 GLY B 293 REMARK 465 GLU B 294 REMARK 465 PRO B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 GLU B 298 REMARK 465 LEU B 299 REMARK 465 PRO B 300 REMARK 465 PRO B 301 REMARK 465 GLY B 302 REMARK 465 SER B 303 REMARK 465 THR B 304 REMARK 465 LYS B 305 REMARK 465 ARG B 306 REMARK 465 ALA B 307 REMARK 465 LEU B 308 REMARK 465 PRO B 309 REMARK 465 ASN B 310 REMARK 465 ASN B 311 REMARK 465 THR B 312 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 120 -14.75 -49.63 REMARK 500 ALA B 138 18.20 56.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 179 ND1 REMARK 620 2 CYS A 176 SG 107.0 REMARK 620 3 CYS A 238 SG 106.7 109.6 REMARK 620 4 CYS A 242 SG 106.8 109.4 116.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 179 ND1 REMARK 620 2 CYS B 238 SG 107.7 REMARK 620 3 CYS B 176 SG 104.2 108.5 REMARK 620 4 CYS B 242 SG 106.3 118.2 111.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1A1U RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE DETERMINATION OF A P53 REMARK 900 MUTANT DIMERIZATION DOMAIN, NMR, MINIMIZED REMARK 900 AVERAGE STRUCTURE REMARK 900 RELATED ID: 1AIE RELATED DB: PDB REMARK 900 P53 TETRAMERIZATION DOMAIN CRYSTAL STRUCTURE REMARK 900 RELATED ID: 1DT7 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE C-TERMINAL REMARK 900 NEGATIVE REGULATORY DOMAIN OF P53 IN A REMARK 900 COMPLEX WITH CA2+-BOUND S100B(BB) REMARK 900 RELATED ID: 1GZH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE BRCT DOMAINS OF REMARK 900 HUMAN 53BP1 BOUND TO THE P53 TUMOR REMARK 900 SUPRESSOR REMARK 900 RELATED ID: 1H26 RELATED DB: PDB REMARK 900 CDK2/CYCLINA IN COMPLEX WITH AN 11-RESIDUE REMARK 900 RECRUITMENT PEPTIDE FROM P53 REMARK 900 RELATED ID: 1HS5 RELATED DB: PDB REMARK 900 NMR SOLUTION STRUCTURE OF DESIGNED P53 DIMER REMARK 900 RELATED ID: 1KZY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 53BP1 BRCT REGION REMARK 900 COMPLEXED TOTUMOR SUPPRESSOR P53 REMARK 900 RELATED ID: 1MA3 RELATED DB: PDB REMARK 900 STRUCTURE OF A SIR2 ENZYME BOUND TO AN REMARK 900 ACETYLATED P53PEPTIDE REMARK 900 RELATED ID: 1OLG RELATED DB: PDB REMARK 900 P53 (OLIGOMERIZATION DOMAIN) (NMR, MINIMIZED REMARK 900 AVERAGE STRUCTURE) REMARK 900 RELATED ID: 1OLH RELATED DB: PDB REMARK 900 P53 (OLIGOMERIZATION DOMAIN) (NMR, 35 REMARK 900 STRUCTURES) REMARK 900 RELATED ID: 1PES RELATED DB: PDB REMARK 900 TUMOR ANTIGEN P53 (TETRAMERIZATION DOMAIN) REMARK 900 (P53TET) (NMR, MINIMIZED AVERAGE STRUCTURE) REMARK 900 RELATED ID: 1PET RELATED DB: PDB REMARK 900 TUMOR ANTIGEN P53 (TETRAMERIZATION DOMAIN) REMARK 900 (P53TET) (NMR, 19 STRUCTURES) REMARK 900 RELATED ID: 1SAE RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAC STRUCTURES) REMARK 900 RELATED ID: 1SAF RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAD STRUCTURES) REMARK 900 RELATED ID: 1SAG RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAC STRUCTURES) REMARK 900 RELATED ID: 1SAH RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAD STRUCTURES) REMARK 900 RELATED ID: 1SAI RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAC STRUCTURES) REMARK 900 RELATED ID: 1SAJ RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAD STRUCTURES) REMARK 900 RELATED ID: 1SAK RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAC STRUCTURES) REMARK 900 RELATED ID: 1SAL RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAD STRUCTURES) REMARK 900 RELATED ID: 1TSR RELATED DB: PDB REMARK 900 P53 CORE DOMAIN IN COMPLEX WITH REMARK 900 DEOXYRIBONUCLEIC ACID REMARK 900 RELATED ID: 1TUP RELATED DB: PDB REMARK 900 TUMOR SUPPRESSOR P53 COMPLEXED WITH REMARK 900 DEOXYRIBONUCLEIC ACID REMARK 900 RELATED ID: 1YCQ RELATED DB: PDB REMARK 900 XENOPUS LAEVIS MDM2 BOUND TO THE REMARK 900 TRANSACTIVATION DOMAIN OF HUMAN P53 REMARK 900 RELATED ID: 1YCR RELATED DB: PDB REMARK 900 MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF REMARK 900 P53 REMARK 900 RELATED ID: 1YCS RELATED DB: PDB REMARK 900 P53-53BP2 COMPLEX REMARK 900 RELATED ID: 3SAK RELATED DB: PDB REMARK 900 HIGH RESOLUTION SOLUTION NMR STRUCTURE OF REMARK 900 THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI- REMARK 900 DIMENSIONAL NMR (SAC STRUCTURES) DBREF 1UOL A 94 312 UNP P04637 P53_HUMAN 94 312 DBREF 1UOL B 94 312 UNP P04637 P53_HUMAN 94 312 SEQADV 1UOL LEU A 133 UNP P04637 MET 133 ENGINEERED MUTATION SEQADV 1UOL ALA A 203 UNP P04637 VAL 203 ENGINEERED MUTATION SEQADV 1UOL TYR A 239 UNP P04637 ASN 239 ENGINEERED MUTATION SEQADV 1UOL ASP A 268 UNP P04637 ASN 268 ENGINEERED MUTATION SEQADV 1UOL LEU B 133 UNP P04637 MET 133 ENGINEERED MUTATION SEQADV 1UOL ALA B 203 UNP P04637 VAL 203 ENGINEERED MUTATION SEQADV 1UOL TYR B 239 UNP P04637 ASN 239 ENGINEERED MUTATION SEQADV 1UOL ASP B 268 UNP P04637 ASN 268 ENGINEERED MUTATION SEQRES 1 A 219 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 A 219 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 A 219 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 A 219 LEU PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 A 219 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 A 219 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 A 219 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 A 219 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 A 219 GLU GLY ASN LEU ARG ALA GLU TYR LEU ASP ASP ARG ASN SEQRES 10 A 219 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 A 219 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 A 219 MET CYS TYR SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 A 219 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 A 219 ASN LEU LEU GLY ARG ASP SER PHE GLU VAL ARG VAL CYS SEQRES 15 A 219 ALA CYS PRO GLY ARG ASP ARG ARG THR GLU GLU GLU ASN SEQRES 16 A 219 LEU ARG LYS LYS GLY GLU PRO HIS HIS GLU LEU PRO PRO SEQRES 17 A 219 GLY SER THR LYS ARG ALA LEU PRO ASN ASN THR SEQRES 1 B 219 SER SER SER VAL PRO SER GLN LYS THR TYR GLN GLY SER SEQRES 2 B 219 TYR GLY PHE ARG LEU GLY PHE LEU HIS SER GLY THR ALA SEQRES 3 B 219 LYS SER VAL THR CYS THR TYR SER PRO ALA LEU ASN LYS SEQRES 4 B 219 LEU PHE CYS GLN LEU ALA LYS THR CYS PRO VAL GLN LEU SEQRES 5 B 219 TRP VAL ASP SER THR PRO PRO PRO GLY THR ARG VAL ARG SEQRES 6 B 219 ALA MET ALA ILE TYR LYS GLN SER GLN HIS MET THR GLU SEQRES 7 B 219 VAL VAL ARG ARG CYS PRO HIS HIS GLU ARG CYS SER ASP SEQRES 8 B 219 SER ASP GLY LEU ALA PRO PRO GLN HIS LEU ILE ARG VAL SEQRES 9 B 219 GLU GLY ASN LEU ARG ALA GLU TYR LEU ASP ASP ARG ASN SEQRES 10 B 219 THR PHE ARG HIS SER VAL VAL VAL PRO TYR GLU PRO PRO SEQRES 11 B 219 GLU VAL GLY SER ASP CYS THR THR ILE HIS TYR ASN TYR SEQRES 12 B 219 MET CYS TYR SER SER CYS MET GLY GLY MET ASN ARG ARG SEQRES 13 B 219 PRO ILE LEU THR ILE ILE THR LEU GLU ASP SER SER GLY SEQRES 14 B 219 ASN LEU LEU GLY ARG ASP SER PHE GLU VAL ARG VAL CYS SEQRES 15 B 219 ALA CYS PRO GLY ARG ASP ARG ARG THR GLU GLU GLU ASN SEQRES 16 B 219 LEU ARG LYS LYS GLY GLU PRO HIS HIS GLU LEU PRO PRO SEQRES 17 B 219 GLY SER THR LYS ARG ALA LEU PRO ASN ASN THR HET ZN A1300 1 HET ZN B1300 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *391(H2 O1) HELIX 1 1 HIS A 178 CYS A 182 5 5 HELIX 2 2 CYS A 277 ARG A 290 1 14 HELIX 3 3 HIS B 178 CYS B 182 5 5 HELIX 4 4 CYS B 277 ARG B 290 1 14 SHEET 1 AA 4 ARG A 110 GLY A 112 0 SHEET 2 AA 4 CYS A 141 TRP A 146 -1 O GLN A 144 N GLY A 112 SHEET 3 AA 4 THR A 230 TYR A 236 -1 O THR A 230 N LEU A 145 SHEET 4 AA 4 ILE A 195 VAL A 197 -1 O ARG A 196 N ASN A 235 SHEET 1 AB 7 CYS A 124 SER A 127 0 SHEET 2 AB 7 LYS A 132 CYS A 135 -1 O LYS A 132 N SER A 127 SHEET 3 AB 7 LEU A 264 VAL A 274 1 O GLU A 271 N LEU A 133 SHEET 4 AB 7 ILE A 251 GLU A 258 -1 O ILE A 251 N VAL A 272 SHEET 5 AB 7 ARG A 156 TYR A 163 -1 O ARG A 156 N GLU A 258 SHEET 6 AB 7 HIS A 214 PRO A 219 -1 O VAL A 216 N ALA A 159 SHEET 7 AB 7 GLU A 204 ASP A 207 -1 O GLU A 204 N VAL A 217 SHEET 1 BA 4 ARG B 110 GLY B 112 0 SHEET 2 BA 4 CYS B 141 TRP B 146 -1 O GLN B 144 N GLY B 112 SHEET 3 BA 4 THR B 230 TYR B 236 -1 O THR B 230 N LEU B 145 SHEET 4 BA 4 ILE B 195 VAL B 197 -1 O ARG B 196 N ASN B 235 SHEET 1 BB 7 CYS B 124 SER B 127 0 SHEET 2 BB 7 LYS B 132 CYS B 135 -1 O LYS B 132 N SER B 127 SHEET 3 BB 7 LEU B 264 VAL B 274 1 O GLU B 271 N LEU B 133 SHEET 4 BB 7 ILE B 251 GLU B 258 -1 O ILE B 251 N VAL B 272 SHEET 5 BB 7 ARG B 156 TYR B 163 -1 O ARG B 156 N GLU B 258 SHEET 6 BB 7 HIS B 214 PRO B 219 -1 O VAL B 216 N ALA B 159 SHEET 7 BB 7 GLU B 204 ASP B 207 -1 O GLU B 204 N VAL B 217 LINK ZN ZN A1300 ND1 HIS A 179 1555 1555 2.02 LINK ZN ZN A1300 SG CYS A 176 1555 1555 2.41 LINK ZN ZN A1300 SG CYS A 238 1555 1555 2.35 LINK ZN ZN A1300 SG CYS A 242 1555 1555 2.35 LINK ZN ZN B1300 SG CYS B 238 1555 1555 2.41 LINK ZN ZN B1300 SG CYS B 176 1555 1555 2.38 LINK ZN ZN B1300 SG CYS B 242 1555 1555 2.32 LINK ZN ZN B1300 ND1 HIS B 179 1555 1555 2.01 SITE 1 AC1 4 CYS A 176 HIS A 179 CYS A 238 CYS A 242 SITE 1 AC2 4 CYS B 176 HIS B 179 CYS B 238 CYS B 242 CRYST1 65.000 71.000 104.800 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015385 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014084 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009542 0.00000