data_1UPR # _entry.id 1UPR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1UPR pdb_00001upr 10.2210/pdb1upr/pdb PDBE EBI-13692 ? ? WWPDB D_1290013692 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1UPQ _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF THE PLECKSTRIN HOMOLOGY (PH) DOMAIN OF PEPP1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1UPR _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2003-10-10 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Milburn, C.C.' 1 'Komander, D.' 2 'Deak, M.' 3 'Alessi, D.R.' 4 'Van Aalten, D.M.F.' 5 # _citation.id primary _citation.title 'Crystal Structure of the Pleckstrin Homology Domain of Pepp1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Milburn, C.C.' 1 ? primary 'Komander, D.' 2 ? primary 'Deak, M.' 3 ? primary 'Alessi, D.R.' 4 ? primary 'Van Aalten, D.M.F.' 5 ? # _cell.entry_id 1UPR _cell.length_a 92.577 _cell.length_b 92.577 _cell.length_c 35.571 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UPR _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY A MEMBER 4' 14142.014 1 ? ? 'PLECKSTRIN HOMOLOGY DOMAIN, RESIDUES 45-167' ? 2 non-polymer syn 'INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE' 500.075 1 ? ? ? ? 3 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PEPP1, PH DOMAIN-CONTAINING FAMILY A MEMBER 4,' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NALRRDPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAE HPGMRTYVLAADTLEDLRGWLRALGRASRAEGDDYGQPRSPAR ; _entity_poly.pdbx_seq_one_letter_code_can ;NALRRDPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAE HPGMRTYVLAADTLEDLRGWLRALGRASRAEGDDYGQPRSPAR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ALA n 1 3 LEU n 1 4 ARG n 1 5 ARG n 1 6 ASP n 1 7 PRO n 1 8 ASN n 1 9 LEU n 1 10 PRO n 1 11 VAL n 1 12 HIS n 1 13 ILE n 1 14 ARG n 1 15 GLY n 1 16 TRP n 1 17 LEU n 1 18 HIS n 1 19 LYS n 1 20 GLN n 1 21 ASP n 1 22 SER n 1 23 SER n 1 24 GLY n 1 25 LEU n 1 26 ARG n 1 27 LEU n 1 28 TRP n 1 29 LYS n 1 30 ARG n 1 31 ARG n 1 32 TRP n 1 33 PHE n 1 34 VAL n 1 35 LEU n 1 36 SER n 1 37 GLY n 1 38 HIS n 1 39 CYS n 1 40 LEU n 1 41 PHE n 1 42 TYR n 1 43 TYR n 1 44 LYS n 1 45 ASP n 1 46 SER n 1 47 ARG n 1 48 GLU n 1 49 GLU n 1 50 SER n 1 51 VAL n 1 52 LEU n 1 53 GLY n 1 54 SER n 1 55 VAL n 1 56 LEU n 1 57 LEU n 1 58 PRO n 1 59 SER n 1 60 TYR n 1 61 ASN n 1 62 ILE n 1 63 ARG n 1 64 PRO n 1 65 ASP n 1 66 GLY n 1 67 PRO n 1 68 GLY n 1 69 ALA n 1 70 PRO n 1 71 ARG n 1 72 GLY n 1 73 ARG n 1 74 ARG n 1 75 PHE n 1 76 THR n 1 77 PHE n 1 78 THR n 1 79 ALA n 1 80 GLU n 1 81 HIS n 1 82 PRO n 1 83 GLY n 1 84 MET n 1 85 ARG n 1 86 THR n 1 87 TYR n 1 88 VAL n 1 89 LEU n 1 90 ALA n 1 91 ALA n 1 92 ASP n 1 93 THR n 1 94 LEU n 1 95 GLU n 1 96 ASP n 1 97 LEU n 1 98 ARG n 1 99 GLY n 1 100 TRP n 1 101 LEU n 1 102 ARG n 1 103 ALA n 1 104 LEU n 1 105 GLY n 1 106 ARG n 1 107 ALA n 1 108 SER n 1 109 ARG n 1 110 ALA n 1 111 GLU n 1 112 GLY n 1 113 ASP n 1 114 ASP n 1 115 TYR n 1 116 GLY n 1 117 GLN n 1 118 PRO n 1 119 ARG n 1 120 SER n 1 121 PRO n 1 122 ALA n 1 123 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX4-T1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PKHA4_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9H4M7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1UPR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9H4M7 _struct_ref_seq.db_align_beg 45 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 167 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1045 _struct_ref_seq.pdbx_auth_seq_align_end 1167 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4IP non-polymer . 'INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE' ? 'C6 H16 O18 P4' 500.075 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1UPR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '16% PEG 20,000, 0.1 M MES (PH 6.0)' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2002-02-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97668 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_wavelength 0.97668 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1UPR _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.270 _reflns.number_obs 7339 _reflns.number_all ? _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.05500 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.2000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.100 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.27 _reflns_shell.d_res_low 2.35 _reflns_shell.percent_possible_all 96.2 _reflns_shell.Rmerge_I_obs 0.32900 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.400 _reflns_shell.pdbx_redundancy 5.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1UPR _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6628 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.27 _refine.ls_percent_reflns_obs 96.9 _refine.ls_R_factor_obs 0.240 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.237 _refine.ls_R_factor_R_free 0.276 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.000 _refine.ls_number_reflns_R_free 499 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 36.28 _refine.aniso_B[1][1] -2.99000 _refine.aniso_B[2][2] -2.99000 _refine.aniso_B[3][3] 5.98000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1UPQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.310 _refine.pdbx_overall_ESU_R_Free 0.241 _refine.overall_SU_ML 0.176 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.242 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 880 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 937 _refine_hist.d_res_high 2.27 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.021 ? 912 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.533 1.987 ? 1244 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.515 3.000 ? 106 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.749 15.000 ? 155 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 133 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 685 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.247 0.300 ? 367 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.500 ? 78 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.207 0.300 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.152 0.500 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.765 1.500 ? 531 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.412 2.000 ? 846 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.987 3.000 ? 381 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.051 4.500 ? 398 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.27 _refine_ls_shell.d_res_low 2.33 _refine_ls_shell.number_reflns_R_work 443 _refine_ls_shell.R_factor_R_work 0.3260 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2960 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1UPR _struct.title 'Crystal structure of the PEPP1 pleckstrin homology domain in complex with Inositol 1,3,4,5-tetrakisphosphate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1UPR _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SIGNALING PROTEIN, SIGNAL TRANSDUCTION, PHOSPHOINOSITIDE BINDING DOMAIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 58 ? TYR A 60 ? PRO A 1102 TYR A 1104 5 ? 3 HELX_P HELX_P2 2 THR A 93 ? ARG A 109 ? THR A 1137 ARG A 1153 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 53 ? LEU A 56 ? GLY A 1097 LEU A 1100 AA 2 CYS A 39 ? TYR A 43 ? CYS A 1083 TYR A 1087 AA 3 TRP A 28 ? SER A 36 ? TRP A 1072 SER A 1080 AA 4 ILE A 13 ? GLN A 20 ? ILE A 1057 GLN A 1064 AA 5 TYR A 87 ? ALA A 90 ? TYR A 1131 ALA A 1134 AA 6 THR A 76 ? GLU A 80 ? THR A 1120 GLU A 1124 AA 7 ASN A 61 ? PRO A 64 ? ASN A 1105 PRO A 1108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 55 ? N VAL A 1099 O LEU A 40 ? O LEU A 1084 AA 2 3 N TYR A 43 ? N TYR A 1087 O TRP A 32 ? O TRP A 1076 AA 3 4 N LEU A 35 ? N LEU A 1079 O ILE A 13 ? O ILE A 1057 AA 4 5 N GLN A 20 ? N GLN A 1064 O VAL A 88 ? O VAL A 1132 AA 5 6 N LEU A 89 ? N LEU A 1133 O PHE A 77 ? O PHE A 1121 AA 6 7 N GLU A 80 ? N GLU A 1124 O ASN A 61 ? O ASN A 1105 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 4IP _struct_site.pdbx_auth_seq_id 2154 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE 4IP A 2154' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 LYS A 19 ? LYS A 1063 . ? 1_555 ? 2 AC1 10 ASP A 21 ? ASP A 1065 . ? 1_555 ? 3 AC1 10 SER A 22 ? SER A 1066 . ? 1_555 ? 4 AC1 10 LYS A 29 ? LYS A 1073 . ? 1_555 ? 5 AC1 10 ARG A 31 ? ARG A 1075 . ? 1_555 ? 6 AC1 10 TYR A 42 ? TYR A 1086 . ? 1_555 ? 7 AC1 10 LYS A 44 ? LYS A 1088 . ? 7_556 ? 8 AC1 10 ARG A 85 ? ARG A 1129 . ? 1_555 ? 9 AC1 10 ARG A 102 ? ARG A 1146 . ? 1_556 ? 10 AC1 10 HOH C . ? HOH A 2029 . ? 1_555 ? # _database_PDB_matrix.entry_id 1UPR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1UPR _atom_sites.fract_transf_matrix[1][1] 0.010802 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010802 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028113 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1045 ? ? ? A . n A 1 2 ALA 2 1046 ? ? ? A . n A 1 3 LEU 3 1047 1047 LEU LEU A . n A 1 4 ARG 4 1048 1048 ARG ARG A . n A 1 5 ARG 5 1049 1049 ARG ARG A . n A 1 6 ASP 6 1050 1050 ASP ASP A . n A 1 7 PRO 7 1051 1051 PRO PRO A . n A 1 8 ASN 8 1052 1052 ASN ASN A . n A 1 9 LEU 9 1053 1053 LEU LEU A . n A 1 10 PRO 10 1054 1054 PRO PRO A . n A 1 11 VAL 11 1055 1055 VAL VAL A . n A 1 12 HIS 12 1056 1056 HIS HIS A . n A 1 13 ILE 13 1057 1057 ILE ILE A . n A 1 14 ARG 14 1058 1058 ARG ARG A . n A 1 15 GLY 15 1059 1059 GLY GLY A . n A 1 16 TRP 16 1060 1060 TRP TRP A . n A 1 17 LEU 17 1061 1061 LEU LEU A . n A 1 18 HIS 18 1062 1062 HIS HIS A . n A 1 19 LYS 19 1063 1063 LYS LYS A . n A 1 20 GLN 20 1064 1064 GLN GLN A . n A 1 21 ASP 21 1065 1065 ASP ASP A . n A 1 22 SER 22 1066 1066 SER SER A . n A 1 23 SER 23 1067 1067 SER SER A . n A 1 24 GLY 24 1068 1068 GLY GLY A . n A 1 25 LEU 25 1069 1069 LEU LEU A . n A 1 26 ARG 26 1070 1070 ARG ARG A . n A 1 27 LEU 27 1071 1071 LEU LEU A . n A 1 28 TRP 28 1072 1072 TRP TRP A . n A 1 29 LYS 29 1073 1073 LYS LYS A . n A 1 30 ARG 30 1074 1074 ARG ARG A . n A 1 31 ARG 31 1075 1075 ARG ARG A . n A 1 32 TRP 32 1076 1076 TRP TRP A . n A 1 33 PHE 33 1077 1077 PHE PHE A . n A 1 34 VAL 34 1078 1078 VAL VAL A . n A 1 35 LEU 35 1079 1079 LEU LEU A . n A 1 36 SER 36 1080 1080 SER SER A . n A 1 37 GLY 37 1081 1081 GLY GLY A . n A 1 38 HIS 38 1082 1082 HIS HIS A . n A 1 39 CYS 39 1083 1083 CYS CYS A . n A 1 40 LEU 40 1084 1084 LEU LEU A . n A 1 41 PHE 41 1085 1085 PHE PHE A . n A 1 42 TYR 42 1086 1086 TYR TYR A . n A 1 43 TYR 43 1087 1087 TYR TYR A . n A 1 44 LYS 44 1088 1088 LYS LYS A . n A 1 45 ASP 45 1089 1089 ASP ASP A . n A 1 46 SER 46 1090 1090 SER SER A . n A 1 47 ARG 47 1091 1091 ARG ARG A . n A 1 48 GLU 48 1092 1092 GLU GLU A . n A 1 49 GLU 49 1093 1093 GLU GLU A . n A 1 50 SER 50 1094 1094 SER SER A . n A 1 51 VAL 51 1095 1095 VAL VAL A . n A 1 52 LEU 52 1096 1096 LEU LEU A . n A 1 53 GLY 53 1097 1097 GLY GLY A . n A 1 54 SER 54 1098 1098 SER SER A . n A 1 55 VAL 55 1099 1099 VAL VAL A . n A 1 56 LEU 56 1100 1100 LEU LEU A . n A 1 57 LEU 57 1101 1101 LEU LEU A . n A 1 58 PRO 58 1102 1102 PRO PRO A . n A 1 59 SER 59 1103 1103 SER SER A . n A 1 60 TYR 60 1104 1104 TYR TYR A . n A 1 61 ASN 61 1105 1105 ASN ASN A . n A 1 62 ILE 62 1106 1106 ILE ILE A . n A 1 63 ARG 63 1107 1107 ARG ARG A . n A 1 64 PRO 64 1108 1108 PRO PRO A . n A 1 65 ASP 65 1109 1109 ASP ASP A . n A 1 66 GLY 66 1110 1110 GLY GLY A . n A 1 67 PRO 67 1111 1111 PRO PRO A . n A 1 68 GLY 68 1112 1112 GLY GLY A . n A 1 69 ALA 69 1113 1113 ALA ALA A . n A 1 70 PRO 70 1114 1114 PRO PRO A . n A 1 71 ARG 71 1115 1115 ARG ARG A . n A 1 72 GLY 72 1116 1116 GLY GLY A . n A 1 73 ARG 73 1117 1117 ARG ARG A . n A 1 74 ARG 74 1118 1118 ARG ARG A . n A 1 75 PHE 75 1119 1119 PHE PHE A . n A 1 76 THR 76 1120 1120 THR THR A . n A 1 77 PHE 77 1121 1121 PHE PHE A . n A 1 78 THR 78 1122 1122 THR THR A . n A 1 79 ALA 79 1123 1123 ALA ALA A . n A 1 80 GLU 80 1124 1124 GLU GLU A . n A 1 81 HIS 81 1125 1125 HIS HIS A . n A 1 82 PRO 82 1126 1126 PRO PRO A . n A 1 83 GLY 83 1127 1127 GLY GLY A . n A 1 84 MET 84 1128 1128 MET MET A . n A 1 85 ARG 85 1129 1129 ARG ARG A . n A 1 86 THR 86 1130 1130 THR THR A . n A 1 87 TYR 87 1131 1131 TYR TYR A . n A 1 88 VAL 88 1132 1132 VAL VAL A . n A 1 89 LEU 89 1133 1133 LEU LEU A . n A 1 90 ALA 90 1134 1134 ALA ALA A . n A 1 91 ALA 91 1135 1135 ALA ALA A . n A 1 92 ASP 92 1136 1136 ASP ASP A . n A 1 93 THR 93 1137 1137 THR THR A . n A 1 94 LEU 94 1138 1138 LEU LEU A . n A 1 95 GLU 95 1139 1139 GLU GLU A . n A 1 96 ASP 96 1140 1140 ASP ASP A . n A 1 97 LEU 97 1141 1141 LEU LEU A . n A 1 98 ARG 98 1142 1142 ARG ARG A . n A 1 99 GLY 99 1143 1143 GLY GLY A . n A 1 100 TRP 100 1144 1144 TRP TRP A . n A 1 101 LEU 101 1145 1145 LEU LEU A . n A 1 102 ARG 102 1146 1146 ARG ARG A . n A 1 103 ALA 103 1147 1147 ALA ALA A . n A 1 104 LEU 104 1148 1148 LEU LEU A . n A 1 105 GLY 105 1149 1149 GLY GLY A . n A 1 106 ARG 106 1150 1150 ARG ARG A . n A 1 107 ALA 107 1151 1151 ALA ALA A . n A 1 108 SER 108 1152 1152 SER SER A . n A 1 109 ARG 109 1153 1153 ARG ARG A . n A 1 110 ALA 110 1154 ? ? ? A . n A 1 111 GLU 111 1155 ? ? ? A . n A 1 112 GLY 112 1156 ? ? ? A . n A 1 113 ASP 113 1157 ? ? ? A . n A 1 114 ASP 114 1158 ? ? ? A . n A 1 115 TYR 115 1159 ? ? ? A . n A 1 116 GLY 116 1160 ? ? ? A . n A 1 117 GLN 117 1161 ? ? ? A . n A 1 118 PRO 118 1162 ? ? ? A . n A 1 119 ARG 119 1163 ? ? ? A . n A 1 120 SER 120 1164 ? ? ? A . n A 1 121 PRO 121 1165 ? ? ? A . n A 1 122 ALA 122 1166 ? ? ? A . n A 1 123 ARG 123 1167 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4IP 1 2154 2154 4IP 4IP A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-10-20 2 'Structure model' 1 1 2012-05-16 3 'Structure model' 1 2 2016-12-07 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' 6 2 'Structure model' 'Structure summary' 7 2 'Structure model' 'Version format compliance' 8 3 'Structure model' 'Database references' 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Database references' 11 4 'Structure model' 'Derived calculations' 12 4 'Structure model' Other 13 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 15.7803 _pdbx_refine_tls.origin_y 32.2178 _pdbx_refine_tls.origin_z 4.2185 _pdbx_refine_tls.T[1][1] 0.0870 _pdbx_refine_tls.T[2][2] 0.0974 _pdbx_refine_tls.T[3][3] 0.0001 _pdbx_refine_tls.T[1][2] 0.0106 _pdbx_refine_tls.T[1][3] 0.0006 _pdbx_refine_tls.T[2][3] -0.0023 _pdbx_refine_tls.L[1][1] 2.2263 _pdbx_refine_tls.L[2][2] 4.0075 _pdbx_refine_tls.L[3][3] 0.9625 _pdbx_refine_tls.L[1][2] -0.0272 _pdbx_refine_tls.L[1][3] -0.2644 _pdbx_refine_tls.L[2][3] 0.1799 _pdbx_refine_tls.S[1][1] -0.0051 _pdbx_refine_tls.S[1][2] 0.0651 _pdbx_refine_tls.S[1][3] 0.0242 _pdbx_refine_tls.S[2][1] 0.0664 _pdbx_refine_tls.S[2][2] -0.0049 _pdbx_refine_tls.S[2][3] 0.0452 _pdbx_refine_tls.S[3][1] 0.0126 _pdbx_refine_tls.S[3][2] -0.0361 _pdbx_refine_tls.S[3][3] 0.0099 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1047 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 1115 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 1129 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OPH _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 4IP _pdbx_validate_close_contact.auth_seq_id_2 2154 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 1136 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 1136 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 1136 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.00 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.70 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 1052 ? ? -95.70 47.10 2 1 SER A 1067 ? ? -133.68 -118.06 3 1 GLU A 1093 ? ? -87.06 -78.75 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 1048 ? CG ? A ARG 4 CG 2 1 Y 0 A ARG 1048 ? CD ? A ARG 4 CD 3 1 Y 0 A ARG 1048 ? NE ? A ARG 4 NE 4 1 Y 0 A ARG 1048 ? CZ ? A ARG 4 CZ 5 1 Y 0 A ARG 1048 ? NH1 ? A ARG 4 NH1 6 1 Y 0 A ARG 1048 ? NH2 ? A ARG 4 NH2 7 1 Y 0 A ASN 1052 ? CG ? A ASN 8 CG 8 1 Y 0 A ASN 1052 ? OD1 ? A ASN 8 OD1 9 1 Y 0 A ASN 1052 ? ND2 ? A ASN 8 ND2 10 1 Y 0 A ARG 1070 ? CD ? A ARG 26 CD 11 1 Y 0 A ARG 1070 ? NE ? A ARG 26 NE 12 1 Y 0 A ARG 1070 ? CZ ? A ARG 26 CZ 13 1 Y 0 A ARG 1070 ? NH1 ? A ARG 26 NH1 14 1 Y 0 A ARG 1070 ? NH2 ? A ARG 26 NH2 15 1 Y 0 A ASN 1105 ? OD1 ? A ASN 61 OD1 16 1 Y 0 A ASN 1105 ? ND2 ? A ASN 61 ND2 17 1 Y 0 A ARG 1142 ? CG ? A ARG 98 CG 18 1 Y 0 A ARG 1142 ? CD ? A ARG 98 CD 19 1 Y 0 A ARG 1142 ? NE ? A ARG 98 NE 20 1 Y 0 A ARG 1142 ? CZ ? A ARG 98 CZ 21 1 Y 0 A ARG 1142 ? NH1 ? A ARG 98 NH1 22 1 Y 0 A ARG 1142 ? NH2 ? A ARG 98 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 1045 ? A ASN 1 2 1 Y 1 A ALA 1046 ? A ALA 2 3 1 Y 1 A ALA 1154 ? A ALA 110 4 1 Y 1 A GLU 1155 ? A GLU 111 5 1 Y 1 A GLY 1156 ? A GLY 112 6 1 Y 1 A ASP 1157 ? A ASP 113 7 1 Y 1 A ASP 1158 ? A ASP 114 8 1 Y 1 A TYR 1159 ? A TYR 115 9 1 Y 1 A GLY 1160 ? A GLY 116 10 1 Y 1 A GLN 1161 ? A GLN 117 11 1 Y 1 A PRO 1162 ? A PRO 118 12 1 Y 1 A ARG 1163 ? A ARG 119 13 1 Y 1 A SER 1164 ? A SER 120 14 1 Y 1 A PRO 1165 ? A PRO 121 15 1 Y 1 A ALA 1166 ? A ALA 122 16 1 Y 1 A ARG 1167 ? A ARG 123 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4IP C1 C N N 1 4IP O1 O N N 2 4IP C2 C N S 3 4IP O2 O N N 4 4IP C3 C N S 5 4IP O3 O N N 6 4IP C4 C N N 7 4IP O4 O N N 8 4IP C5 C N R 9 4IP O5 O N N 10 4IP C6 C N S 11 4IP O6 O N N 12 4IP P1 P N N 13 4IP O1P O N N 14 4IP O2P O N N 15 4IP O3P O N N 16 4IP P3 P N N 17 4IP O4P O N N 18 4IP O5P O N N 19 4IP O6P O N N 20 4IP P4 P N N 21 4IP O7P O N N 22 4IP O8P O N N 23 4IP O9P O N N 24 4IP P5 P N N 25 4IP OPF O N N 26 4IP OPG O N N 27 4IP OPH O N N 28 4IP H1 H N N 29 4IP H2 H N N 30 4IP HO2 H N N 31 4IP H3 H N N 32 4IP H4 H N N 33 4IP H5 H N N 34 4IP H6 H N N 35 4IP HO6 H N N 36 4IP HO2P H N N 37 4IP HO3P H N N 38 4IP HO5P H N N 39 4IP HO6P H N N 40 4IP HO7P H N N 41 4IP HO8P H N N 42 4IP HOP1 H N N 43 4IP HOP3 H N N 44 ALA N N N N 45 ALA CA C N S 46 ALA C C N N 47 ALA O O N N 48 ALA CB C N N 49 ALA OXT O N N 50 ALA H H N N 51 ALA H2 H N N 52 ALA HA H N N 53 ALA HB1 H N N 54 ALA HB2 H N N 55 ALA HB3 H N N 56 ALA HXT H N N 57 ARG N N N N 58 ARG CA C N S 59 ARG C C N N 60 ARG O O N N 61 ARG CB C N N 62 ARG CG C N N 63 ARG CD C N N 64 ARG NE N N N 65 ARG CZ C N N 66 ARG NH1 N N N 67 ARG NH2 N N N 68 ARG OXT O N N 69 ARG H H N N 70 ARG H2 H N N 71 ARG HA H N N 72 ARG HB2 H N N 73 ARG HB3 H N N 74 ARG HG2 H N N 75 ARG HG3 H N N 76 ARG HD2 H N N 77 ARG HD3 H N N 78 ARG HE H N N 79 ARG HH11 H N N 80 ARG HH12 H N N 81 ARG HH21 H N N 82 ARG HH22 H N N 83 ARG HXT H N N 84 ASN N N N N 85 ASN CA C N S 86 ASN C C N N 87 ASN O O N N 88 ASN CB C N N 89 ASN CG C N N 90 ASN OD1 O N N 91 ASN ND2 N N N 92 ASN OXT O N N 93 ASN H H N N 94 ASN H2 H N N 95 ASN HA H N N 96 ASN HB2 H N N 97 ASN HB3 H N N 98 ASN HD21 H N N 99 ASN HD22 H N N 100 ASN HXT H N N 101 ASP N N N N 102 ASP CA C N S 103 ASP C C N N 104 ASP O O N N 105 ASP CB C N N 106 ASP CG C N N 107 ASP OD1 O N N 108 ASP OD2 O N N 109 ASP OXT O N N 110 ASP H H N N 111 ASP H2 H N N 112 ASP HA H N N 113 ASP HB2 H N N 114 ASP HB3 H N N 115 ASP HD2 H N N 116 ASP HXT H N N 117 CYS N N N N 118 CYS CA C N R 119 CYS C C N N 120 CYS O O N N 121 CYS CB C N N 122 CYS SG S N N 123 CYS OXT O N N 124 CYS H H N N 125 CYS H2 H N N 126 CYS HA H N N 127 CYS HB2 H N N 128 CYS HB3 H N N 129 CYS HG H N N 130 CYS HXT H N N 131 GLN N N N N 132 GLN CA C N S 133 GLN C C N N 134 GLN O O N N 135 GLN CB C N N 136 GLN CG C N N 137 GLN CD C N N 138 GLN OE1 O N N 139 GLN NE2 N N N 140 GLN OXT O N N 141 GLN H H N N 142 GLN H2 H N N 143 GLN HA H N N 144 GLN HB2 H N N 145 GLN HB3 H N N 146 GLN HG2 H N N 147 GLN HG3 H N N 148 GLN HE21 H N N 149 GLN HE22 H N N 150 GLN HXT H N N 151 GLU N N N N 152 GLU CA C N S 153 GLU C C N N 154 GLU O O N N 155 GLU CB C N N 156 GLU CG C N N 157 GLU CD C N N 158 GLU OE1 O N N 159 GLU OE2 O N N 160 GLU OXT O N N 161 GLU H H N N 162 GLU H2 H N N 163 GLU HA H N N 164 GLU HB2 H N N 165 GLU HB3 H N N 166 GLU HG2 H N N 167 GLU HG3 H N N 168 GLU HE2 H N N 169 GLU HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 HIS N N N N 181 HIS CA C N S 182 HIS C C N N 183 HIS O O N N 184 HIS CB C N N 185 HIS CG C Y N 186 HIS ND1 N Y N 187 HIS CD2 C Y N 188 HIS CE1 C Y N 189 HIS NE2 N Y N 190 HIS OXT O N N 191 HIS H H N N 192 HIS H2 H N N 193 HIS HA H N N 194 HIS HB2 H N N 195 HIS HB3 H N N 196 HIS HD1 H N N 197 HIS HD2 H N N 198 HIS HE1 H N N 199 HIS HE2 H N N 200 HIS HXT H N N 201 HOH O O N N 202 HOH H1 H N N 203 HOH H2 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4IP C1 O1 sing N N 1 4IP C1 C2 sing N N 2 4IP C1 C6 sing N N 3 4IP C1 H1 sing N N 4 4IP O1 P1 sing N N 5 4IP C2 O2 sing N N 6 4IP C2 C3 sing N N 7 4IP C2 H2 sing N N 8 4IP O2 HO2 sing N N 9 4IP C3 O3 sing N N 10 4IP C3 C4 sing N N 11 4IP C3 H3 sing N N 12 4IP O3 P3 sing N N 13 4IP C4 O4 sing N N 14 4IP C4 C5 sing N N 15 4IP C4 H4 sing N N 16 4IP O4 P4 sing N N 17 4IP C5 O5 sing N N 18 4IP C5 C6 sing N N 19 4IP C5 H5 sing N N 20 4IP O5 P5 sing N N 21 4IP C6 O6 sing N N 22 4IP C6 H6 sing N N 23 4IP O6 HO6 sing N N 24 4IP P1 O1P doub N N 25 4IP P1 O2P sing N N 26 4IP P1 O3P sing N N 27 4IP O2P HO2P sing N N 28 4IP O3P HO3P sing N N 29 4IP P3 O4P doub N N 30 4IP P3 O5P sing N N 31 4IP P3 O6P sing N N 32 4IP O5P HO5P sing N N 33 4IP O6P HO6P sing N N 34 4IP P4 O7P sing N N 35 4IP P4 O8P sing N N 36 4IP P4 O9P doub N N 37 4IP O7P HO7P sing N N 38 4IP O8P HO8P sing N N 39 4IP P5 OPF sing N N 40 4IP P5 OPG doub N N 41 4IP P5 OPH sing N N 42 4IP OPF HOP1 sing N N 43 4IP OPH HOP3 sing N N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE' 4IP 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1UPQ _pdbx_initial_refinement_model.details 'PDB ENTRY 1UPQ' #