data_1USZ # _entry.id 1USZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1USZ PDBE EBI-14079 WWPDB D_1290014079 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1USQ unspecified 'COMPLEX OF E. COLI DRAE ADHESIN WITH CHLORAMPHENICOL' PDB 1UT2 unspecified 'AFAE-3 ADHESIN FROM ESCHERICHIA COLI' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1USZ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2003-12-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Anderson, K.L.' 1 'Billington, J.' 2 'Pettigrew, D.' 3 'Cota, E.' 4 'Roversi, P.' 5 'Simpson, P.' 6 'Chen, H.A.' 7 'Urvil, P.' 8 'Dumerle, L.' 9 'Barlow, P.' 10 'Medof, E.' 11 'Smith, R.A.G.' 12 'Nowicki, B.' 13 'Le Bouguenec, C.' 14 'Lea, S.M.' 15 'Matthews, S.' 16 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol' J.Biol.Chem. 279 46851 ? 2004 JBCHA3 US 0021-9258 0071 ? 15331605 10.1074/JBC.M409284200 1 'An Atomic Resolution Model for Assmebly, Architecture,and Function of the Dr Adhesins' Mol.Cell 15 647 ? 2004 MOCEFL US 1097-2765 2168 ? 15327779 10.1016/J.MOLCEL.2004.08.003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pettigrew, D.' 1 primary 'Anderson, K.L.' 2 primary 'Billington, J.' 3 primary 'Cota, E.' 4 primary 'Simpson, P.' 5 primary 'Urvil, P.' 6 primary 'Rabuzin, F.' 7 primary 'Roversi, P.' 8 primary 'Nowicki, B.' 9 primary 'Du Merle, L.' 10 primary 'Le Bouguenec, C.' 11 primary 'Matthews, S.' 12 primary 'Lea, S.M.' 13 1 'Anderson, K.L.' 14 1 'Billington, J.' 15 1 'Pettigrew, D.' 16 1 'Cota, E.' 17 1 'Simpson, P.' 18 1 'Roversi, P.' 19 1 'Chen, H.A.' 20 1 'Urvil, P.' 21 1 'Du Merle, L.' 22 1 'Barlow, P.N.' 23 1 'Medof, M.E.' 24 1 'Smith, R.A.G.' 25 1 'Nowicki, B.' 26 1 'Le Bouguenec, C.' 27 1 'Lea, S.M.' 28 1 'Matthews, S.' 29 # _cell.entry_id 1USZ _cell.length_a 141.300 _cell.length_b 141.300 _cell.length_c 141.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1USZ _symmetry.space_group_name_H-M 'I 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AFIMBRIAL ADHESIN AFA-III' 16233.725 1 ? YES ? 'SELENOMETHIONINE DERIVATIVE' 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name AFAE3 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;RGSHHHHHHGSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKF FLISDNNRDKLYVNIRP(MSE)DNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWAK ; _entity_poly.pdbx_seq_one_letter_code_can ;RGSHHHHHHGSFTPSGTTGTTKLTVTEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKF FLISDNNRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 GLY n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 GLY n 1 11 SER n 1 12 PHE n 1 13 THR n 1 14 PRO n 1 15 SER n 1 16 GLY n 1 17 THR n 1 18 THR n 1 19 GLY n 1 20 THR n 1 21 THR n 1 22 LYS n 1 23 LEU n 1 24 THR n 1 25 VAL n 1 26 THR n 1 27 GLU n 1 28 GLU n 1 29 CYS n 1 30 GLN n 1 31 VAL n 1 32 ARG n 1 33 VAL n 1 34 GLY n 1 35 ASP n 1 36 LEU n 1 37 THR n 1 38 VAL n 1 39 ALA n 1 40 LYS n 1 41 THR n 1 42 ARG n 1 43 GLY n 1 44 GLN n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 ALA n 1 49 ALA n 1 50 PRO n 1 51 ILE n 1 52 GLY n 1 53 PRO n 1 54 VAL n 1 55 THR n 1 56 VAL n 1 57 GLN n 1 58 ALA n 1 59 LEU n 1 60 GLY n 1 61 CYS n 1 62 ASN n 1 63 ALA n 1 64 ARG n 1 65 GLN n 1 66 VAL n 1 67 ALA n 1 68 LEU n 1 69 LYS n 1 70 ALA n 1 71 ASP n 1 72 THR n 1 73 ASP n 1 74 ASN n 1 75 PHE n 1 76 GLU n 1 77 GLN n 1 78 GLY n 1 79 LYS n 1 80 PHE n 1 81 PHE n 1 82 LEU n 1 83 ILE n 1 84 SER n 1 85 ASP n 1 86 ASN n 1 87 ASN n 1 88 ARG n 1 89 ASP n 1 90 LYS n 1 91 LEU n 1 92 TYR n 1 93 VAL n 1 94 ASN n 1 95 ILE n 1 96 ARG n 1 97 PRO n 1 98 MSE n 1 99 ASP n 1 100 ASN n 1 101 SER n 1 102 ALA n 1 103 TRP n 1 104 THR n 1 105 THR n 1 106 ASP n 1 107 ASN n 1 108 GLY n 1 109 VAL n 1 110 PHE n 1 111 TYR n 1 112 LYS n 1 113 ASN n 1 114 ASP n 1 115 VAL n 1 116 GLY n 1 117 SER n 1 118 TRP n 1 119 GLY n 1 120 GLY n 1 121 THR n 1 122 ILE n 1 123 GLY n 1 124 ILE n 1 125 TYR n 1 126 VAL n 1 127 ASP n 1 128 GLY n 1 129 GLN n 1 130 GLN n 1 131 THR n 1 132 ASN n 1 133 THR n 1 134 PRO n 1 135 PRO n 1 136 GLY n 1 137 ASN n 1 138 TYR n 1 139 THR n 1 140 LEU n 1 141 THR n 1 142 LEU n 1 143 THR n 1 144 GLY n 1 145 GLY n 1 146 TYR n 1 147 TRP n 1 148 ALA n 1 149 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain A30 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PQE-30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'N-TERMINUS 6-HIS-TAGGED' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1USZ 1 ? ? 1USZ ? 2 UNP FMA3_ECOLI 1 ? ? Q57254 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1USZ A 1 ? 9 ? 1USZ -9 ? -1 ? -9 -1 2 2 1USZ A 10 ? 149 ? Q57254 21 ? 160 ? 0 139 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1USZ GLY A 10 ? UNP Q57254 ALA 21 'engineered mutation' 0 1 1 1USZ SER A 11 ? UNP Q57254 GLY 22 'engineered mutation' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1USZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.62 _exptl_crystal.density_percent_sol 67 _exptl_crystal.description 'SOLVED BY SAD WITH AUTOSHARP' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2.0 M AMMONIUM SULPHATE, 2% PEG 400, 0.1M NAHEPES PH 6.8' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97892 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength 0.97892 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1USZ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.900 _reflns.d_resolution_high 3.100 _reflns.number_obs 5108 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.08400 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.8000 _reflns.B_iso_Wilson_estimate -2.3 _reflns.pdbx_redundancy 23.000 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.27 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.32000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.700 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1USZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 3941 _refine.ls_number_reflns_all 3941 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 3.28 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.220 _refine.ls_R_factor_all 0.220 _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.247 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 713 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'BABINET SCALING' _refine.solvent_model_param_ksol 0.36 _refine.solvent_model_param_bsol 37 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'MAXIMUM LIKELIHOOD BUSTER-TNT REFINEMENT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model 'TNT BCORREL' _refine.pdbx_stereochemistry_target_values 'TNT CSDX_PROTGEO' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1059 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 1069 _refine_hist.d_res_high 3.28 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.006 ? 2 1085 'X-RAY DIFFRACTION' ? t_angle_deg 0.667 ? 3 1475 'X-RAY DIFFRACTION' ? t_dihedral_angle_d 20.71 ? 0.00 636 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? 0 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.007 ? 2 30 'X-RAY DIFFRACTION' ? t_gen_planes 0.013 ? 5 157 'X-RAY DIFFRACTION' ? t_it 1.268 ? 20.000 1085 'X-RAY DIFFRACTION' ? t_nbd 0.032 ? 5 42 'X-RAY DIFFRACTION' ? t_omega_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1USZ _pdbx_refine.R_factor_all_no_cutoff 0.220 _pdbx_refine.R_factor_obs_no_cutoff 0.218 _pdbx_refine.free_R_factor_no_cutoff 0.247 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 713 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 1USZ _struct.title 'SeMet AfaE-3 adhesin from Escherichia Coli' _struct.pdbx_descriptor 'AFIMBRIAL ADHESIN AFA-III' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1USZ _struct_keywords.pdbx_keywords ADHESIN _struct_keywords.text 'ADHESIN, AFAE-3, AFIMBRIAL ADHESIN, UPEC, DAEC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ;THE MONOMER SITS AROUND THE THREEFOLD AXIS AND FORMS ATRIMER WITH ITS THREEFOLD-RELATED COPIES; THE TRIMER ISLINKED INTERNALLY BY INTERMOLECULAR DISULPHIDE BONDS. ; # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 43 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 45 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 33 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 35 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 61 SG ? ? A CYS 19 A CYS 51 9_555 ? ? ? ? ? ? ? 2.031 ? covale1 covale ? ? A PRO 97 C ? ? ? 1_555 A MSE 98 N ? ? A PRO 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 98 C ? ? ? 1_555 A ASP 99 N ? ? A MSE 88 A ASP 89 1_555 ? ? ? ? ? ? ? 1.326 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AB 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ALA A 39 ? THR A 41 ? ALA A 29 THR A 31 AA 2 SER A 11 ? THR A 26 ? SER A 1 THR A 16 AA 3 GLY A 136 ? ALA A 148 ? GLY A 126 ALA A 138 AA 4 GLN A 65 ? ALA A 70 ? GLN A 55 ALA A 60 AA 5 VAL A 109 ? LYS A 112 ? VAL A 99 LYS A 102 AA 6 TRP A 103 ? ASP A 106 ? TRP A 93 ASP A 96 AB 1 ALA A 39 ? THR A 41 ? ALA A 29 THR A 31 AB 2 SER A 11 ? THR A 26 ? SER A 1 THR A 16 AB 3 GLY A 136 ? ALA A 148 ? GLY A 126 ALA A 138 AB 4 PHE A 80 ? SER A 84 ? PHE A 70 SER A 74 AB 5 LYS A 90 ? PRO A 97 ? LYS A 80 PRO A 87 AB 6 GLY A 119 ? VAL A 126 ? GLY A 109 VAL A 116 AB 7 PRO A 50 ? GLN A 57 ? PRO A 40 GLN A 47 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LYS A 40 ? N LYS A 30 O THR A 24 ? O THR A 14 AA 2 3 N VAL A 25 ? N VAL A 15 O GLY A 136 ? O GLY A 126 AA 3 4 N TRP A 147 ? N TRP A 137 O GLN A 65 ? O GLN A 55 AA 4 5 N LEU A 68 ? N LEU A 58 O PHE A 110 ? O PHE A 100 AA 5 6 N TYR A 111 ? N TYR A 101 O THR A 104 ? O THR A 94 AB 1 2 N LYS A 40 ? N LYS A 30 O THR A 24 ? O THR A 14 AB 2 3 N VAL A 25 ? N VAL A 15 O GLY A 136 ? O GLY A 126 AB 3 4 N THR A 139 ? N THR A 129 O ILE A 83 ? O ILE A 73 AB 4 5 N LEU A 82 ? N LEU A 72 O LEU A 91 ? O LEU A 81 AB 5 6 N ARG A 96 ? N ARG A 86 O GLY A 123 ? O GLY A 113 AB 6 7 O ILE A 124 ? O ILE A 114 N ILE A 51 ? N ILE A 41 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 A1140' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CL A1141' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 THR A 20 ? THR A 10 . ? 1_555 ? 2 AC1 2 ASP A 35 ? ASP A 25 . ? 1_555 ? 3 AC2 1 GLY A 52 ? GLY A 42 . ? 1_555 ? # _database_PDB_matrix.entry_id 1USZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1USZ _atom_sites.fract_transf_matrix[1][1] 0.007077 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007077 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007077 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 -9 ? ? ? A . n A 1 2 GLY 2 -8 ? ? ? A . n A 1 3 SER 3 -7 ? ? ? A . n A 1 4 HIS 4 -6 ? ? ? A . n A 1 5 HIS 5 -5 ? ? ? A . n A 1 6 HIS 6 -4 ? ? ? A . n A 1 7 HIS 7 -3 ? ? ? A . n A 1 8 HIS 8 -2 ? ? ? A . n A 1 9 HIS 9 -1 ? ? ? A . n A 1 10 GLY 10 0 0 GLY GLY A . n A 1 11 SER 11 1 1 SER SER A . n A 1 12 PHE 12 2 2 PHE PHE A . n A 1 13 THR 13 3 3 THR THR A . n A 1 14 PRO 14 4 4 PRO PRO A . n A 1 15 SER 15 5 5 SER SER A . n A 1 16 GLY 16 6 6 GLY GLY A . n A 1 17 THR 17 7 7 THR THR A . n A 1 18 THR 18 8 8 THR THR A . n A 1 19 GLY 19 9 9 GLY GLY A . n A 1 20 THR 20 10 10 THR THR A . n A 1 21 THR 21 11 11 THR THR A . n A 1 22 LYS 22 12 12 LYS LYS A . n A 1 23 LEU 23 13 13 LEU LEU A . n A 1 24 THR 24 14 14 THR THR A . n A 1 25 VAL 25 15 15 VAL VAL A . n A 1 26 THR 26 16 16 THR THR A . n A 1 27 GLU 27 17 17 GLU GLU A . n A 1 28 GLU 28 18 18 GLU GLU A . n A 1 29 CYS 29 19 19 CYS CYS A . n A 1 30 GLN 30 20 20 GLN GLN A . n A 1 31 VAL 31 21 21 VAL VAL A . n A 1 32 ARG 32 22 22 ARG ARG A . n A 1 33 VAL 33 23 23 VAL VAL A . n A 1 34 GLY 34 24 24 GLY GLY A . n A 1 35 ASP 35 25 25 ASP ASP A . n A 1 36 LEU 36 26 26 LEU LEU A . n A 1 37 THR 37 27 27 THR THR A . n A 1 38 VAL 38 28 28 VAL VAL A . n A 1 39 ALA 39 29 29 ALA ALA A . n A 1 40 LYS 40 30 30 LYS LYS A . n A 1 41 THR 41 31 31 THR THR A . n A 1 42 ARG 42 32 32 ARG ARG A . n A 1 43 GLY 43 33 33 GLY GLY A . n A 1 44 GLN 44 34 34 GLN GLN A . n A 1 45 LEU 45 35 35 LEU LEU A . n A 1 46 THR 46 36 36 THR THR A . n A 1 47 ASP 47 37 37 ASP ASP A . n A 1 48 ALA 48 38 38 ALA ALA A . n A 1 49 ALA 49 39 39 ALA ALA A . n A 1 50 PRO 50 40 40 PRO PRO A . n A 1 51 ILE 51 41 41 ILE ILE A . n A 1 52 GLY 52 42 42 GLY GLY A . n A 1 53 PRO 53 43 43 PRO PRO A . n A 1 54 VAL 54 44 44 VAL VAL A . n A 1 55 THR 55 45 45 THR THR A . n A 1 56 VAL 56 46 46 VAL VAL A . n A 1 57 GLN 57 47 47 GLN GLN A . n A 1 58 ALA 58 48 48 ALA ALA A . n A 1 59 LEU 59 49 49 LEU LEU A . n A 1 60 GLY 60 50 50 GLY GLY A . n A 1 61 CYS 61 51 51 CYS CYS A . n A 1 62 ASN 62 52 52 ASN ASN A . n A 1 63 ALA 63 53 53 ALA ALA A . n A 1 64 ARG 64 54 54 ARG ARG A . n A 1 65 GLN 65 55 55 GLN GLN A . n A 1 66 VAL 66 56 56 VAL VAL A . n A 1 67 ALA 67 57 57 ALA ALA A . n A 1 68 LEU 68 58 58 LEU LEU A . n A 1 69 LYS 69 59 59 LYS LYS A . n A 1 70 ALA 70 60 60 ALA ALA A . n A 1 71 ASP 71 61 61 ASP ASP A . n A 1 72 THR 72 62 62 THR THR A . n A 1 73 ASP 73 63 63 ASP ASP A . n A 1 74 ASN 74 64 64 ASN ASN A . n A 1 75 PHE 75 65 65 PHE PHE A . n A 1 76 GLU 76 66 66 GLU GLU A . n A 1 77 GLN 77 67 67 GLN GLN A . n A 1 78 GLY 78 68 68 GLY GLY A . n A 1 79 LYS 79 69 69 LYS LYS A . n A 1 80 PHE 80 70 70 PHE PHE A . n A 1 81 PHE 81 71 71 PHE PHE A . n A 1 82 LEU 82 72 72 LEU LEU A . n A 1 83 ILE 83 73 73 ILE ILE A . n A 1 84 SER 84 74 74 SER SER A . n A 1 85 ASP 85 75 75 ASP ASP A . n A 1 86 ASN 86 76 76 ASN ASN A . n A 1 87 ASN 87 77 77 ASN ASN A . n A 1 88 ARG 88 78 78 ARG ARG A . n A 1 89 ASP 89 79 79 ASP ASP A . n A 1 90 LYS 90 80 80 LYS LYS A . n A 1 91 LEU 91 81 81 LEU LEU A . n A 1 92 TYR 92 82 82 TYR TYR A . n A 1 93 VAL 93 83 83 VAL VAL A . n A 1 94 ASN 94 84 84 ASN ASN A . n A 1 95 ILE 95 85 85 ILE ILE A . n A 1 96 ARG 96 86 86 ARG ARG A . n A 1 97 PRO 97 87 87 PRO PRO A . n A 1 98 MSE 98 88 88 MSE MSE A . n A 1 99 ASP 99 89 89 ASP ASP A . n A 1 100 ASN 100 90 90 ASN ASN A . n A 1 101 SER 101 91 91 SER SER A . n A 1 102 ALA 102 92 92 ALA ALA A . n A 1 103 TRP 103 93 93 TRP TRP A . n A 1 104 THR 104 94 94 THR THR A . n A 1 105 THR 105 95 95 THR THR A . n A 1 106 ASP 106 96 96 ASP ASP A . n A 1 107 ASN 107 97 97 ASN ASN A . n A 1 108 GLY 108 98 98 GLY GLY A . n A 1 109 VAL 109 99 99 VAL VAL A . n A 1 110 PHE 110 100 100 PHE PHE A . n A 1 111 TYR 111 101 101 TYR TYR A . n A 1 112 LYS 112 102 102 LYS LYS A . n A 1 113 ASN 113 103 103 ASN ASN A . n A 1 114 ASP 114 104 104 ASP ASP A . n A 1 115 VAL 115 105 105 VAL VAL A . n A 1 116 GLY 116 106 106 GLY GLY A . n A 1 117 SER 117 107 107 SER SER A . n A 1 118 TRP 118 108 108 TRP TRP A . n A 1 119 GLY 119 109 109 GLY GLY A . n A 1 120 GLY 120 110 110 GLY GLY A . n A 1 121 THR 121 111 111 THR THR A . n A 1 122 ILE 122 112 112 ILE ILE A . n A 1 123 GLY 123 113 113 GLY GLY A . n A 1 124 ILE 124 114 114 ILE ILE A . n A 1 125 TYR 125 115 115 TYR TYR A . n A 1 126 VAL 126 116 116 VAL VAL A . n A 1 127 ASP 127 117 117 ASP ASP A . n A 1 128 GLY 128 118 118 GLY GLY A . n A 1 129 GLN 129 119 119 GLN GLN A . n A 1 130 GLN 130 120 120 GLN GLN A . n A 1 131 THR 131 121 121 THR THR A . n A 1 132 ASN 132 122 122 ASN ASN A . n A 1 133 THR 133 123 123 THR THR A . n A 1 134 PRO 134 124 124 PRO PRO A . n A 1 135 PRO 135 125 125 PRO PRO A . n A 1 136 GLY 136 126 126 GLY GLY A . n A 1 137 ASN 137 127 127 ASN ASN A . n A 1 138 TYR 138 128 128 TYR TYR A . n A 1 139 THR 139 129 129 THR THR A . n A 1 140 LEU 140 130 130 LEU LEU A . n A 1 141 THR 141 131 131 THR THR A . n A 1 142 LEU 142 132 132 LEU LEU A . n A 1 143 THR 143 133 133 THR THR A . n A 1 144 GLY 144 134 134 GLY GLY A . n A 1 145 GLY 145 135 135 GLY GLY A . n A 1 146 TYR 146 136 136 TYR TYR A . n A 1 147 TRP 147 137 137 TRP TRP A . n A 1 148 ALA 148 138 138 ALA ALA A . n A 1 149 LYS 149 139 139 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1140 1140 SO4 SO4 A . C 3 CL 1 1141 1141 CL CL A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 98 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 88 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-31 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XFIT 'model building' . ? 1 SCALA 'data scaling' . ? 2 RANTAN phasing . ? 3 SHARP phasing . ? 4 SOLOMON phasing . ? 5 XFIT phasing . ? 6 TNT refinement 5E ? 7 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_entry_details.entry_id 1USZ _pdbx_entry_details.compound_details ;ENGINEERED MUTATION IN CHAIN A GLY 21 TO ALA 21 ENGINEERED MUTATION IN CHAIN A SER 22 TO GLY 22 ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'MUTATIONS A0G, G1S' # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 42 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 43 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 43 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 96.21 _pdbx_validate_rmsd_angle.angle_target_value 128.40 _pdbx_validate_rmsd_angle.angle_deviation -32.19 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? -169.83 79.67 2 1 ILE A 41 ? ? -97.05 -123.16 3 1 ARG A 78 ? ? -126.07 -70.26 4 1 SER A 91 ? ? -33.57 145.44 5 1 VAL A 105 ? ? -58.83 -175.67 6 1 THR A 121 ? ? -67.32 3.01 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG -9 ? A ARG 1 2 1 Y 1 A GLY -8 ? A GLY 2 3 1 Y 1 A SER -7 ? A SER 3 4 1 Y 1 A HIS -6 ? A HIS 4 5 1 Y 1 A HIS -5 ? A HIS 5 6 1 Y 1 A HIS -4 ? A HIS 6 7 1 Y 1 A HIS -3 ? A HIS 7 8 1 Y 1 A HIS -2 ? A HIS 8 9 1 Y 1 A HIS -1 ? A HIS 9 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'CHLORIDE ION' CL 4 water HOH #