HEADER TRANSFERASE 04-DEC-03 1V6S TITLE CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM THERMUS THERMOPHILUS TITLE 2 HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLYCERATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.2.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS PHOSPHOGLYCERATE KINASE, THERMUS THERMOPHILUS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.MIZUTANI,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 4 25-OCT-23 1V6S 1 REMARK LINK REVDAT 3 13-JUL-11 1V6S 1 VERSN REVDAT 2 24-FEB-09 1V6S 1 VERSN REVDAT 1 23-DEC-03 1V6S 0 JRNL AUTH H.MIZUTANI,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM THERMUS JRNL TITL 2 THERMOPHILUS HB8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2567263.230 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 140777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7031 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13162 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 721 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 734 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.49000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM SIGMAA (A) : 0.09 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.11 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.030 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.580 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.840 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.710 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 54.83 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : GOL.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : GOL.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1V6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000006277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 140815 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.460 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.38 REMARK 200 R MERGE FOR SHELL (I) : 0.19200 REMARK 200 R SYM FOR SHELL (I) : 0.16900 REMARK 200 FOR SHELL : 7.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 1VPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, ACETATE, PH 5.3, REMARK 280 MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.42733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.21367 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.82050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.60683 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.03417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 88 45.89 -73.05 REMARK 500 ASN A 113 119.91 -36.29 REMARK 500 VAL A 153 -57.76 -120.79 REMARK 500 PRO B 88 49.86 -73.54 REMARK 500 ASN B 113 119.60 -35.84 REMARK 500 LYS B 180 -110.02 -94.82 REMARK 500 ALA B 372 -6.84 -154.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1405 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 204 OG REMARK 620 2 GLU A 378 O 84.1 REMARK 620 3 HOH A1569 O 70.9 91.0 REMARK 620 4 HOH A1755 O 92.3 90.5 162.9 REMARK 620 5 HOH A1756 O 98.1 173.1 83.6 95.9 REMARK 620 6 HOH A1757 O 166.4 99.0 95.7 100.9 77.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 204 OG REMARK 620 2 GLU B 378 O 87.9 REMARK 620 3 HOH B1595 O 72.9 91.8 REMARK 620 4 HOH B1717 O 94.8 94.3 166.0 REMARK 620 5 HOH B1718 O 97.4 174.1 87.3 87.8 REMARK 620 6 HOH B1748 O 167.1 89.1 94.7 98.0 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1407 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B1484 O REMARK 620 2 HOH B1496 O 92.9 REMARK 620 3 HOH B1545 O 102.2 95.1 REMARK 620 4 HOH B1547 O 74.6 98.9 165.8 REMARK 620 5 HOH B1668 O 172.9 87.9 84.8 98.3 REMARK 620 6 HOH B1746 O 103.2 163.9 82.4 84.9 76.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003000467.1 RELATED DB: TARGETDB DBREF 1V6S A 1 390 UNP P09403 PGK_THET8 0 389 DBREF 1V6S B 1 390 UNP P09403 PGK_THET8 0 389 SEQRES 1 A 390 MET ARG THR LEU LEU ASP LEU ASP PRO LYS GLY LYS ARG SEQRES 2 A 390 VAL LEU VAL ARG VAL ASP TYR ASN VAL PRO VAL GLN ASP SEQRES 3 A 390 GLY LYS VAL GLN ASP GLU THR ARG ILE LEU GLU SER LEU SEQRES 4 A 390 PRO THR LEU ARG HIS LEU LEU ALA GLY GLY ALA SER LEU SEQRES 5 A 390 VAL LEU LEU SER HIS LEU GLY ARG PRO LYS GLY PRO ASP SEQRES 6 A 390 PRO LYS TYR SER LEU ALA PRO VAL GLY GLU ALA LEU ARG SEQRES 7 A 390 ALA HIS LEU PRO GLU ALA ARG PHE ALA PRO PHE PRO PRO SEQRES 8 A 390 GLY SER GLU GLU ALA ARG ARG GLU ALA GLU ALA LEU ARG SEQRES 9 A 390 PRO GLY GLU VAL LEU LEU LEU GLU ASN VAL ARG PHE GLU SEQRES 10 A 390 PRO GLY GLU GLU LYS ASN ASP PRO GLU LEU SER ALA ARG SEQRES 11 A 390 TYR ALA ARG LEU GLY GLU ALA PHE VAL LEU ASP ALA PHE SEQRES 12 A 390 GLY SER ALA HIS ARG ALA HIS ALA SER VAL VAL GLY VAL SEQRES 13 A 390 ALA ARG LEU LEU PRO ALA TYR ALA GLY PHE LEU MET GLU SEQRES 14 A 390 LYS GLU VAL ARG ALA LEU SER ARG LEU LEU LYS ASP PRO SEQRES 15 A 390 GLU ARG PRO TYR ALA VAL VAL LEU GLY GLY ALA LYS VAL SEQRES 16 A 390 SER ASP LYS ILE GLY VAL ILE GLU SER LEU LEU PRO ARG SEQRES 17 A 390 ILE ASP ARG LEU LEU ILE GLY GLY ALA MET ALA PHE THR SEQRES 18 A 390 PHE LEU LYS ALA LEU GLY GLY GLU VAL GLY ARG SER LEU SEQRES 19 A 390 VAL GLU GLU ASP ARG LEU ASP LEU ALA LYS ASP LEU LEU SEQRES 20 A 390 GLY ARG ALA GLU ALA LEU GLY VAL ARG VAL TYR LEU PRO SEQRES 21 A 390 GLU ASP VAL VAL ALA ALA GLU ARG ILE GLU ALA GLY VAL SEQRES 22 A 390 GLU THR ARG VAL PHE PRO ALA ARG ALA ILE PRO VAL PRO SEQRES 23 A 390 TYR MET GLY LEU ASP ILE GLY PRO LYS THR ARG GLU ALA SEQRES 24 A 390 PHE ALA ARG ALA LEU GLU GLY ALA ARG THR VAL PHE TRP SEQRES 25 A 390 ASN GLY PRO MET GLY VAL PHE GLU VAL PRO PRO PHE ASP SEQRES 26 A 390 GLU GLY THR LEU ALA VAL GLY GLN ALA ILE ALA ALA LEU SEQRES 27 A 390 GLU GLY ALA PHE THR VAL VAL GLY GLY GLY ASP SER VAL SEQRES 28 A 390 ALA ALA VAL ASN ARG LEU GLY LEU LYS GLU ARG PHE GLY SEQRES 29 A 390 HIS VAL SER THR GLY GLY GLY ALA SER LEU GLU PHE LEU SEQRES 30 A 390 GLU LYS GLY THR LEU PRO GLY LEU GLU VAL LEU GLU GLY SEQRES 1 B 390 MET ARG THR LEU LEU ASP LEU ASP PRO LYS GLY LYS ARG SEQRES 2 B 390 VAL LEU VAL ARG VAL ASP TYR ASN VAL PRO VAL GLN ASP SEQRES 3 B 390 GLY LYS VAL GLN ASP GLU THR ARG ILE LEU GLU SER LEU SEQRES 4 B 390 PRO THR LEU ARG HIS LEU LEU ALA GLY GLY ALA SER LEU SEQRES 5 B 390 VAL LEU LEU SER HIS LEU GLY ARG PRO LYS GLY PRO ASP SEQRES 6 B 390 PRO LYS TYR SER LEU ALA PRO VAL GLY GLU ALA LEU ARG SEQRES 7 B 390 ALA HIS LEU PRO GLU ALA ARG PHE ALA PRO PHE PRO PRO SEQRES 8 B 390 GLY SER GLU GLU ALA ARG ARG GLU ALA GLU ALA LEU ARG SEQRES 9 B 390 PRO GLY GLU VAL LEU LEU LEU GLU ASN VAL ARG PHE GLU SEQRES 10 B 390 PRO GLY GLU GLU LYS ASN ASP PRO GLU LEU SER ALA ARG SEQRES 11 B 390 TYR ALA ARG LEU GLY GLU ALA PHE VAL LEU ASP ALA PHE SEQRES 12 B 390 GLY SER ALA HIS ARG ALA HIS ALA SER VAL VAL GLY VAL SEQRES 13 B 390 ALA ARG LEU LEU PRO ALA TYR ALA GLY PHE LEU MET GLU SEQRES 14 B 390 LYS GLU VAL ARG ALA LEU SER ARG LEU LEU LYS ASP PRO SEQRES 15 B 390 GLU ARG PRO TYR ALA VAL VAL LEU GLY GLY ALA LYS VAL SEQRES 16 B 390 SER ASP LYS ILE GLY VAL ILE GLU SER LEU LEU PRO ARG SEQRES 17 B 390 ILE ASP ARG LEU LEU ILE GLY GLY ALA MET ALA PHE THR SEQRES 18 B 390 PHE LEU LYS ALA LEU GLY GLY GLU VAL GLY ARG SER LEU SEQRES 19 B 390 VAL GLU GLU ASP ARG LEU ASP LEU ALA LYS ASP LEU LEU SEQRES 20 B 390 GLY ARG ALA GLU ALA LEU GLY VAL ARG VAL TYR LEU PRO SEQRES 21 B 390 GLU ASP VAL VAL ALA ALA GLU ARG ILE GLU ALA GLY VAL SEQRES 22 B 390 GLU THR ARG VAL PHE PRO ALA ARG ALA ILE PRO VAL PRO SEQRES 23 B 390 TYR MET GLY LEU ASP ILE GLY PRO LYS THR ARG GLU ALA SEQRES 24 B 390 PHE ALA ARG ALA LEU GLU GLY ALA ARG THR VAL PHE TRP SEQRES 25 B 390 ASN GLY PRO MET GLY VAL PHE GLU VAL PRO PRO PHE ASP SEQRES 26 B 390 GLU GLY THR LEU ALA VAL GLY GLN ALA ILE ALA ALA LEU SEQRES 27 B 390 GLU GLY ALA PHE THR VAL VAL GLY GLY GLY ASP SER VAL SEQRES 28 B 390 ALA ALA VAL ASN ARG LEU GLY LEU LYS GLU ARG PHE GLY SEQRES 29 B 390 HIS VAL SER THR GLY GLY GLY ALA SER LEU GLU PHE LEU SEQRES 30 B 390 GLU LYS GLY THR LEU PRO GLY LEU GLU VAL LEU GLU GLY HET NA A1405 1 HET GOL A1401 6 HET GOL A1402 6 HET NA B1406 1 HET NA B1407 1 HET GOL B1403 6 HET GOL B1404 6 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NA 3(NA 1+) FORMUL 4 GOL 4(C3 H8 O3) FORMUL 10 HOH *734(H2 O) HELIX 1 1 THR A 3 LEU A 7 5 5 HELIX 2 2 GLU A 32 GLY A 48 1 17 HELIX 3 3 ASP A 65 SER A 69 5 5 HELIX 4 4 LEU A 70 LEU A 81 1 12 HELIX 5 5 SER A 93 ALA A 102 1 10 HELIX 6 6 ASN A 113 GLU A 117 5 5 HELIX 7 7 ASP A 124 ALA A 132 1 9 HELIX 8 8 ARG A 133 GLY A 135 5 3 HELIX 9 9 ALA A 142 ALA A 146 5 5 HELIX 10 10 GLY A 155 LEU A 159 5 5 HELIX 11 11 GLY A 165 ARG A 177 1 13 HELIX 12 12 LYS A 194 ASP A 197 5 4 HELIX 13 13 LYS A 198 LEU A 206 1 9 HELIX 14 14 PRO A 207 ILE A 209 5 3 HELIX 15 15 MET A 218 LEU A 226 1 9 HELIX 16 16 GLU A 236 ASP A 238 5 3 HELIX 17 17 ARG A 239 GLY A 254 1 16 HELIX 18 18 GLY A 293 LEU A 304 1 12 HELIX 19 19 ASP A 325 ALA A 337 1 13 HELIX 20 20 GLY A 347 ARG A 356 1 10 HELIX 21 21 LEU A 359 PHE A 363 5 5 HELIX 22 22 GLY A 371 GLY A 380 1 10 HELIX 23 23 LEU A 382 VAL A 387 1 6 HELIX 24 24 THR B 3 LEU B 7 5 5 HELIX 25 25 GLU B 32 GLY B 48 1 17 HELIX 26 26 ASP B 65 SER B 69 5 5 HELIX 27 27 LEU B 70 ALA B 79 1 10 HELIX 28 28 SER B 93 ALA B 102 1 10 HELIX 29 29 ASN B 113 GLU B 117 5 5 HELIX 30 30 ASP B 124 ALA B 132 1 9 HELIX 31 31 ARG B 133 GLY B 135 5 3 HELIX 32 32 ALA B 142 ALA B 146 5 5 HELIX 33 33 GLY B 155 LEU B 159 5 5 HELIX 34 34 GLY B 165 LEU B 178 1 14 HELIX 35 35 LYS B 194 ASP B 197 5 4 HELIX 36 36 LYS B 198 LEU B 206 1 9 HELIX 37 37 PRO B 207 ILE B 209 5 3 HELIX 38 38 ALA B 217 LEU B 226 1 10 HELIX 39 39 GLU B 236 ASP B 238 5 3 HELIX 40 40 ARG B 239 LEU B 253 1 15 HELIX 41 41 GLY B 293 GLU B 305 1 13 HELIX 42 42 ASP B 325 LEU B 338 1 14 HELIX 43 43 GLY B 347 LEU B 357 1 11 HELIX 44 44 LEU B 359 PHE B 363 5 5 HELIX 45 45 ALA B 372 GLY B 380 1 9 HELIX 46 46 LEU B 382 VAL B 387 1 6 SHEET 1 A 6 ALA A 84 PHE A 86 0 SHEET 2 A 6 VAL A 108 LEU A 110 1 O LEU A 110 N ARG A 85 SHEET 3 A 6 SER A 51 LEU A 55 1 N LEU A 54 O LEU A 109 SHEET 4 A 6 ARG A 13 ARG A 17 1 N VAL A 16 O VAL A 53 SHEET 5 A 6 ALA A 137 LEU A 140 1 O VAL A 139 N LEU A 15 SHEET 6 A 6 ALA A 162 ALA A 164 1 O TYR A 163 N LEU A 140 SHEET 1 B 2 VAL A 24 GLN A 25 0 SHEET 2 B 2 LYS A 28 VAL A 29 -1 O LYS A 28 N GLN A 25 SHEET 1 C 6 ARG A 256 TYR A 258 0 SHEET 2 C 6 ARG A 211 ILE A 214 1 N LEU A 212 O TYR A 258 SHEET 3 C 6 TYR A 186 LEU A 190 1 N VAL A 188 O LEU A 213 SHEET 4 C 6 THR A 309 ASN A 313 1 O PHE A 311 N VAL A 189 SHEET 5 C 6 PHE A 342 GLY A 346 1 O VAL A 344 N TRP A 312 SHEET 6 C 6 HIS A 365 VAL A 366 1 O HIS A 365 N VAL A 345 SHEET 1 D 3 ARG A 276 PRO A 279 0 SHEET 2 D 3 ASP A 262 ALA A 266 -1 N ALA A 265 O ARG A 276 SHEET 3 D 3 MET A 288 ILE A 292 -1 O LEU A 290 N VAL A 264 SHEET 1 E 6 ALA B 84 PHE B 86 0 SHEET 2 E 6 VAL B 108 LEU B 110 1 O LEU B 110 N ARG B 85 SHEET 3 E 6 SER B 51 LEU B 55 1 N LEU B 54 O LEU B 109 SHEET 4 E 6 ARG B 13 ARG B 17 1 N VAL B 16 O VAL B 53 SHEET 5 E 6 ALA B 137 LEU B 140 1 O VAL B 139 N ARG B 17 SHEET 6 E 6 ALA B 162 ALA B 164 1 O TYR B 163 N LEU B 140 SHEET 1 F 2 VAL B 24 GLN B 25 0 SHEET 2 F 2 LYS B 28 VAL B 29 -1 O LYS B 28 N GLN B 25 SHEET 1 G 6 ARG B 256 TYR B 258 0 SHEET 2 G 6 ARG B 211 ILE B 214 1 N LEU B 212 O TYR B 258 SHEET 3 G 6 TYR B 186 LEU B 190 1 N VAL B 188 O LEU B 213 SHEET 4 G 6 THR B 309 ASN B 313 1 O PHE B 311 N VAL B 189 SHEET 5 G 6 PHE B 342 GLY B 346 1 O VAL B 344 N VAL B 310 SHEET 6 G 6 HIS B 365 VAL B 366 1 O HIS B 365 N VAL B 345 SHEET 1 H 3 ARG B 276 PRO B 279 0 SHEET 2 H 3 ASP B 262 ALA B 266 -1 N ALA B 265 O ARG B 276 SHEET 3 H 3 MET B 288 ILE B 292 -1 O LEU B 290 N VAL B 264 LINK OG SER A 204 NA NA A1405 1555 1555 2.67 LINK O GLU A 378 NA NA A1405 1555 1555 2.40 LINK NA NA A1405 O HOH A1569 1555 1555 2.39 LINK NA NA A1405 O HOH A1755 1555 1555 2.30 LINK NA NA A1405 O HOH A1756 1555 1555 2.48 LINK NA NA A1405 O HOH A1757 1555 1555 2.43 LINK OG SER B 204 NA NA B1406 1555 1555 2.67 LINK O GLU B 378 NA NA B1406 1555 1555 2.20 LINK NA NA B1406 O HOH B1595 1555 1555 2.57 LINK NA NA B1406 O HOH B1717 1555 1555 2.34 LINK NA NA B1406 O HOH B1718 1555 1555 2.37 LINK NA NA B1406 O HOH B1748 1555 1555 2.48 LINK NA NA B1407 O HOH B1484 1555 1555 2.76 LINK NA NA B1407 O HOH B1496 1555 1555 2.61 LINK NA NA B1407 O HOH B1545 1555 1555 2.47 LINK NA NA B1407 O HOH B1547 1555 1555 2.50 LINK NA NA B1407 O HOH B1668 1555 1555 2.58 LINK NA NA B1407 O HOH B1746 1555 1555 2.65 CISPEP 1 ARG A 184 PRO A 185 0 -0.20 CISPEP 2 VAL A 285 PRO A 286 0 0.18 CISPEP 3 PRO A 322 PRO A 323 0 0.26 CISPEP 4 ARG B 184 PRO B 185 0 -0.32 CISPEP 5 VAL B 285 PRO B 286 0 1.43 CISPEP 6 PRO B 322 PRO B 323 0 0.11 SITE 1 AC1 6 SER A 204 GLU A 378 HOH A1569 HOH A1755 SITE 2 AC1 6 HOH A1756 HOH A1757 SITE 1 AC2 6 SER B 204 GLU B 378 HOH B1595 HOH B1717 SITE 2 AC2 6 HOH B1718 HOH B1748 SITE 1 AC3 6 HOH B1484 HOH B1496 HOH B1545 HOH B1547 SITE 2 AC3 6 HOH B1668 HOH B1746 SITE 1 AC4 8 GLU A 126 ARG A 130 HOH A1435 HOH A1506 SITE 2 AC4 8 GLY B 92 SER B 93 GLU B 117 ARG B 130 SITE 1 AC5 5 ARG A 60 TYR A 68 GLY A 227 ARG A 281 SITE 2 AC5 5 HOH A1530 SITE 1 AC6 8 GLY A 92 SER A 93 GLU A 117 ARG A 130 SITE 2 AC6 8 GLU B 126 ARG B 130 HOH B1472 HOH B1488 SITE 1 AC7 7 ARG B 60 PRO B 61 TYR B 68 GLY B 227 SITE 2 AC7 7 ARG B 281 HOH B1448 HOH B1486 CRYST1 143.175 143.175 75.641 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006984 0.004032 0.000000 0.00000 SCALE2 0.000000 0.008065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013220 0.00000