data_1V8Q # _entry.id 1V8Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1V8Q pdb_00001v8q 10.2210/pdb1v8q/pdb RCSB RCSB006347 ? ? WWPDB D_1000006347 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-13 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1V8Q _pdbx_database_status.recvd_initial_deposition_date 2004-01-13 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ttk003000826 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, H.' 1 'Takemoto-Hori, C.' 2 'Murayama, K.' 3 'Terada, T.' 4 'Shirouzu, M.' 5 'Kuramitsu, S.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 13 _citation.page_first 2806 _citation.page_last 2810 _citation.year 2004 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15340170 _citation.pdbx_database_id_DOI 10.1110/ps.04864904 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, H.' 1 ? primary 'Takemoto-Hori, C.' 2 ? primary 'Murayama, K.' 3 ? primary 'Sakai, H.' 4 ? primary 'Tatsuguchi, A.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Kuramitsu, S.' 8 ? primary 'Yokoyama, S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TT0826 9529.074 4 ? ? ? ? 2 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? 3 water nat water 18.015 18 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRGRLGRYVH VRPLA ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRGRLGRYVH VRPLA ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ttk003000826 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 LYS n 1 5 LYS n 1 6 GLY n 1 7 LEU n 1 8 GLY n 1 9 SER n 1 10 THR n 1 11 ARG n 1 12 ASN n 1 13 GLY n 1 14 ARG n 1 15 ASP n 1 16 SER n 1 17 GLN n 1 18 ALA n 1 19 LYS n 1 20 ARG n 1 21 LEU n 1 22 GLY n 1 23 VAL n 1 24 LYS n 1 25 ARG n 1 26 TYR n 1 27 GLU n 1 28 GLY n 1 29 GLN n 1 30 VAL n 1 31 VAL n 1 32 ARG n 1 33 ALA n 1 34 GLY n 1 35 ASN n 1 36 ILE n 1 37 LEU n 1 38 VAL n 1 39 ARG n 1 40 GLN n 1 41 ARG n 1 42 GLY n 1 43 THR n 1 44 ARG n 1 45 PHE n 1 46 LYS n 1 47 PRO n 1 48 GLY n 1 49 LYS n 1 50 ASN n 1 51 VAL n 1 52 GLY n 1 53 MET n 1 54 GLY n 1 55 ARG n 1 56 ASP n 1 57 PHE n 1 58 THR n 1 59 LEU n 1 60 PHE n 1 61 ALA n 1 62 LEU n 1 63 VAL n 1 64 ASP n 1 65 GLY n 1 66 VAL n 1 67 VAL n 1 68 GLU n 1 69 PHE n 1 70 GLN n 1 71 ASP n 1 72 ARG n 1 73 GLY n 1 74 ARG n 1 75 LEU n 1 76 GLY n 1 77 ARG n 1 78 TYR n 1 79 VAL n 1 80 HIS n 1 81 VAL n 1 82 ARG n 1 83 PRO n 1 84 LEU n 1 85 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-26 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 LEU 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 SER 9 9 ? ? ? A . n A 1 10 THR 10 10 ? ? ? A . n A 1 11 ARG 11 11 ? ? ? A . n A 1 12 ASN 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 ARG 14 14 ? ? ? A . n A 1 15 ASP 15 15 ? ? ? A . n A 1 16 SER 16 16 ? ? ? A . n A 1 17 GLN 17 17 ? ? ? A . n A 1 18 ALA 18 18 ? ? ? A . n A 1 19 LYS 19 19 ? ? ? A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ALA 85 85 85 ALA ALA A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 HIS 3 3 ? ? ? B . n B 1 4 LYS 4 4 ? ? ? B . n B 1 5 LYS 5 5 ? ? ? B . n B 1 6 GLY 6 6 ? ? ? B . n B 1 7 LEU 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 SER 9 9 ? ? ? B . n B 1 10 THR 10 10 ? ? ? B . n B 1 11 ARG 11 11 ? ? ? B . n B 1 12 ASN 12 12 ? ? ? B . n B 1 13 GLY 13 13 ? ? ? B . n B 1 14 ARG 14 14 ? ? ? B . n B 1 15 ASP 15 15 ? ? ? B . n B 1 16 SER 16 16 ? ? ? B . n B 1 17 GLN 17 17 ? ? ? B . n B 1 18 ALA 18 18 ? ? ? B . n B 1 19 LYS 19 19 ? ? ? B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 TYR 26 26 26 TYR TYR B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 GLN 29 29 29 GLN GLN B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 ARG 39 39 39 ARG ARG B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ARG 44 44 44 ARG ARG B . n B 1 45 PHE 45 45 45 PHE PHE B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 ASN 50 50 50 ASN ASN B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 MET 53 53 53 MET MET B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 ASP 56 56 56 ASP ASP B . n B 1 57 PHE 57 57 57 PHE PHE B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 PHE 60 60 60 PHE PHE B . n B 1 61 ALA 61 61 61 ALA ALA B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 PHE 69 69 69 PHE PHE B . n B 1 70 GLN 70 70 70 GLN GLN B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 ARG 77 77 77 ARG ARG B . n B 1 78 TYR 78 78 78 TYR TYR B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 HIS 80 80 80 HIS HIS B . n B 1 81 VAL 81 81 81 VAL VAL B . n B 1 82 ARG 82 82 82 ARG ARG B . n B 1 83 PRO 83 83 83 PRO PRO B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 ALA 85 85 85 ALA ALA B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 ALA 2 2 ? ? ? C . n C 1 3 HIS 3 3 ? ? ? C . n C 1 4 LYS 4 4 ? ? ? C . n C 1 5 LYS 5 5 ? ? ? C . n C 1 6 GLY 6 6 ? ? ? C . n C 1 7 LEU 7 7 ? ? ? C . n C 1 8 GLY 8 8 ? ? ? C . n C 1 9 SER 9 9 ? ? ? C . n C 1 10 THR 10 10 ? ? ? C . n C 1 11 ARG 11 11 ? ? ? C . n C 1 12 ASN 12 12 ? ? ? C . n C 1 13 GLY 13 13 ? ? ? C . n C 1 14 ARG 14 14 ? ? ? C . n C 1 15 ASP 15 15 ? ? ? C . n C 1 16 SER 16 16 ? ? ? C . n C 1 17 GLN 17 17 ? ? ? C . n C 1 18 ALA 18 18 ? ? ? C . n C 1 19 LYS 19 19 ? ? ? C . n C 1 20 ARG 20 20 20 ARG ARG C . n C 1 21 LEU 21 21 21 LEU LEU C . n C 1 22 GLY 22 22 22 GLY GLY C . n C 1 23 VAL 23 23 23 VAL VAL C . n C 1 24 LYS 24 24 24 LYS LYS C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 TYR 26 26 26 TYR TYR C . n C 1 27 GLU 27 27 27 GLU GLU C . n C 1 28 GLY 28 28 28 GLY GLY C . n C 1 29 GLN 29 29 29 GLN GLN C . n C 1 30 VAL 30 30 30 VAL VAL C . n C 1 31 VAL 31 31 31 VAL VAL C . n C 1 32 ARG 32 32 32 ARG ARG C . n C 1 33 ALA 33 33 33 ALA ALA C . n C 1 34 GLY 34 34 34 GLY GLY C . n C 1 35 ASN 35 35 35 ASN ASN C . n C 1 36 ILE 36 36 36 ILE ILE C . n C 1 37 LEU 37 37 37 LEU LEU C . n C 1 38 VAL 38 38 38 VAL VAL C . n C 1 39 ARG 39 39 39 ARG ARG C . n C 1 40 GLN 40 40 40 GLN GLN C . n C 1 41 ARG 41 41 41 ARG ARG C . n C 1 42 GLY 42 42 42 GLY GLY C . n C 1 43 THR 43 43 43 THR THR C . n C 1 44 ARG 44 44 44 ARG ARG C . n C 1 45 PHE 45 45 45 PHE PHE C . n C 1 46 LYS 46 46 46 LYS LYS C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 GLY 48 48 48 GLY GLY C . n C 1 49 LYS 49 49 49 LYS LYS C . n C 1 50 ASN 50 50 50 ASN ASN C . n C 1 51 VAL 51 51 51 VAL VAL C . n C 1 52 GLY 52 52 52 GLY GLY C . n C 1 53 MET 53 53 53 MET MET C . n C 1 54 GLY 54 54 54 GLY GLY C . n C 1 55 ARG 55 55 55 ARG ARG C . n C 1 56 ASP 56 56 56 ASP ASP C . n C 1 57 PHE 57 57 57 PHE PHE C . n C 1 58 THR 58 58 58 THR THR C . n C 1 59 LEU 59 59 59 LEU LEU C . n C 1 60 PHE 60 60 60 PHE PHE C . n C 1 61 ALA 61 61 61 ALA ALA C . n C 1 62 LEU 62 62 62 LEU LEU C . n C 1 63 VAL 63 63 63 VAL VAL C . n C 1 64 ASP 64 64 64 ASP ASP C . n C 1 65 GLY 65 65 65 GLY GLY C . n C 1 66 VAL 66 66 66 VAL VAL C . n C 1 67 VAL 67 67 67 VAL VAL C . n C 1 68 GLU 68 68 68 GLU GLU C . n C 1 69 PHE 69 69 69 PHE PHE C . n C 1 70 GLN 70 70 70 GLN GLN C . n C 1 71 ASP 71 71 71 ASP ASP C . n C 1 72 ARG 72 72 72 ARG ARG C . n C 1 73 GLY 73 73 73 GLY GLY C . n C 1 74 ARG 74 74 74 ARG ARG C . n C 1 75 LEU 75 75 75 LEU LEU C . n C 1 76 GLY 76 76 76 GLY GLY C . n C 1 77 ARG 77 77 77 ARG ARG C . n C 1 78 TYR 78 78 78 TYR TYR C . n C 1 79 VAL 79 79 79 VAL VAL C . n C 1 80 HIS 80 80 80 HIS HIS C . n C 1 81 VAL 81 81 81 VAL VAL C . n C 1 82 ARG 82 82 82 ARG ARG C . n C 1 83 PRO 83 83 83 PRO PRO C . n C 1 84 LEU 84 84 84 LEU LEU C . n C 1 85 ALA 85 85 85 ALA ALA C . n D 1 1 MET 1 1 ? ? ? D . n D 1 2 ALA 2 2 ? ? ? D . n D 1 3 HIS 3 3 ? ? ? D . n D 1 4 LYS 4 4 ? ? ? D . n D 1 5 LYS 5 5 ? ? ? D . n D 1 6 GLY 6 6 ? ? ? D . n D 1 7 LEU 7 7 ? ? ? D . n D 1 8 GLY 8 8 ? ? ? D . n D 1 9 SER 9 9 ? ? ? D . n D 1 10 THR 10 10 ? ? ? D . n D 1 11 ARG 11 11 ? ? ? D . n D 1 12 ASN 12 12 ? ? ? D . n D 1 13 GLY 13 13 ? ? ? D . n D 1 14 ARG 14 14 ? ? ? D . n D 1 15 ASP 15 15 ? ? ? D . n D 1 16 SER 16 16 ? ? ? D . n D 1 17 GLN 17 17 ? ? ? D . n D 1 18 ALA 18 18 ? ? ? D . n D 1 19 LYS 19 19 ? ? ? D . n D 1 20 ARG 20 20 20 ARG ARG D . n D 1 21 LEU 21 21 21 LEU LEU D . n D 1 22 GLY 22 22 22 GLY GLY D . n D 1 23 VAL 23 23 23 VAL VAL D . n D 1 24 LYS 24 24 24 LYS LYS D . n D 1 25 ARG 25 25 25 ARG ARG D . n D 1 26 TYR 26 26 26 TYR TYR D . n D 1 27 GLU 27 27 27 GLU GLU D . n D 1 28 GLY 28 28 28 GLY GLY D . n D 1 29 GLN 29 29 29 GLN GLN D . n D 1 30 VAL 30 30 30 VAL VAL D . n D 1 31 VAL 31 31 31 VAL VAL D . n D 1 32 ARG 32 32 32 ARG ARG D . n D 1 33 ALA 33 33 33 ALA ALA D . n D 1 34 GLY 34 34 34 GLY GLY D . n D 1 35 ASN 35 35 35 ASN ASN D . n D 1 36 ILE 36 36 36 ILE ILE D . n D 1 37 LEU 37 37 37 LEU LEU D . n D 1 38 VAL 38 38 38 VAL VAL D . n D 1 39 ARG 39 39 39 ARG ARG D . n D 1 40 GLN 40 40 40 GLN GLN D . n D 1 41 ARG 41 41 41 ARG ARG D . n D 1 42 GLY 42 42 42 GLY GLY D . n D 1 43 THR 43 43 43 THR THR D . n D 1 44 ARG 44 44 44 ARG ARG D . n D 1 45 PHE 45 45 45 PHE PHE D . n D 1 46 LYS 46 46 46 LYS LYS D . n D 1 47 PRO 47 47 47 PRO PRO D . n D 1 48 GLY 48 48 48 GLY GLY D . n D 1 49 LYS 49 49 49 LYS LYS D . n D 1 50 ASN 50 50 50 ASN ASN D . n D 1 51 VAL 51 51 51 VAL VAL D . n D 1 52 GLY 52 52 52 GLY GLY D . n D 1 53 MET 53 53 53 MET MET D . n D 1 54 GLY 54 54 54 GLY GLY D . n D 1 55 ARG 55 55 55 ARG ARG D . n D 1 56 ASP 56 56 56 ASP ASP D . n D 1 57 PHE 57 57 57 PHE PHE D . n D 1 58 THR 58 58 58 THR THR D . n D 1 59 LEU 59 59 59 LEU LEU D . n D 1 60 PHE 60 60 60 PHE PHE D . n D 1 61 ALA 61 61 61 ALA ALA D . n D 1 62 LEU 62 62 62 LEU LEU D . n D 1 63 VAL 63 63 63 VAL VAL D . n D 1 64 ASP 64 64 64 ASP ASP D . n D 1 65 GLY 65 65 65 GLY GLY D . n D 1 66 VAL 66 66 66 VAL VAL D . n D 1 67 VAL 67 67 67 VAL VAL D . n D 1 68 GLU 68 68 68 GLU GLU D . n D 1 69 PHE 69 69 69 PHE PHE D . n D 1 70 GLN 70 70 70 GLN GLN D . n D 1 71 ASP 71 71 71 ASP ASP D . n D 1 72 ARG 72 72 72 ARG ARG D . n D 1 73 GLY 73 73 73 GLY GLY D . n D 1 74 ARG 74 74 74 ARG ARG D . n D 1 75 LEU 75 75 75 LEU LEU D . n D 1 76 GLY 76 76 76 GLY GLY D . n D 1 77 ARG 77 77 77 ARG ARG D . n D 1 78 TYR 78 78 78 TYR TYR D . n D 1 79 VAL 79 79 79 VAL VAL D . n D 1 80 HIS 80 80 80 HIS HIS D . n D 1 81 VAL 81 81 81 VAL VAL D . n D 1 82 ARG 82 82 82 ARG ARG D . n D 1 83 PRO 83 83 83 PRO PRO D . n D 1 84 LEU 84 84 84 LEU LEU D . n D 1 85 ALA 85 85 85 ALA ALA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DTT 1 101 1 DTT DTT D . F 3 HOH 1 86 2 HOH HOH A . F 3 HOH 2 87 4 HOH HOH A . F 3 HOH 3 88 7 HOH HOH A . F 3 HOH 4 89 8 HOH HOH A . F 3 HOH 5 90 13 HOH HOH A . F 3 HOH 6 91 16 HOH HOH A . F 3 HOH 7 92 17 HOH HOH A . G 3 HOH 1 86 1 HOH HOH B . H 3 HOH 1 86 9 HOH HOH C . H 3 HOH 2 87 12 HOH HOH C . I 3 HOH 1 102 3 HOH HOH D . I 3 HOH 2 103 5 HOH HOH D . I 3 HOH 3 104 6 HOH HOH D . I 3 HOH 4 105 10 HOH HOH D . I 3 HOH 5 106 11 HOH HOH D . I 3 HOH 6 107 14 HOH HOH D . I 3 HOH 7 108 15 HOH HOH D . I 3 HOH 8 109 18 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1V8Q _cell.length_a 48.543 _cell.length_b 48.543 _cell.length_c 139.120 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 # _symmetry.entry_id 1V8Q _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 78 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 1V8Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'PEG 4000, Ammonium Acetate, tri-Sodium Citrate dihydrate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 303K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MACSCIENCE 2002-02-25 ? 2 'IMAGE PLATE' RIGAKU 2002-12-13 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si 111 CHANNEL' 'SINGLE WAVELENGTH' x-ray 2 1 M ? MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.90 1.0 2 0.96000 1.0 3 0.97854 1.0 4 0.97934 1.0 5 0.98454 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SPRING-8 BEAMLINE BL44B2' SPring-8 BL44B2 ? 0.90 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL26B1' SPring-8 BL26B1 ? '0.96000, 0.97854, 0.97934, 0.98454' # _reflns.entry_id 1V8Q _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 45.83 _reflns.d_resolution_high 2.80 _reflns.number_obs 7947 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.074 _reflns.pdbx_netI_over_sigmaI 27.8 _reflns.B_iso_Wilson_estimate 48.7 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.43 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 6.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 766 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1V8Q _refine.ls_number_reflns_obs 7520 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 237937.01 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.83 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 94.6 _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.197 _refine.ls_R_factor_R_free 0.236 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.7 _refine.ls_number_reflns_R_free 802 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 58.9 _refine.aniso_B[1][1] 16.44 _refine.aniso_B[2][2] 16.44 _refine.aniso_B[3][3] -32.88 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.389673 _refine.solvent_model_param_bsol 58.2951 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1V8Q _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.51 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.41 _refine_analyze.Luzzati_sigma_a_free 0.58 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2116 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 2142 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 45.83 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.70 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.98 _refine_ls_shell.number_reflns_R_work 993 _refine_ls_shell.R_factor_R_work 0.32 _refine_ls_shell.percent_reflns_obs 83.4 _refine_ls_shell.R_factor_R_free 0.353 _refine_ls_shell.R_factor_R_free_error 0.035 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 99 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 3 DTT_CNS.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1V8Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1V8Q _struct.title 'Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1V8Q _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text 'structural genomics, proteomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSLATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P84123_THETH _struct_ref.pdbx_db_accession P84123 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1V8Q A 1 ? 85 ? P84123 1 ? 85 ? 1 85 2 1 1V8Q B 1 ? 85 ? P84123 1 ? 85 ? 1 85 3 1 1V8Q C 1 ? 85 ? P84123 1 ? 85 ? 1 85 4 1 1V8Q D 1 ? 85 ? P84123 1 ? 85 ? 1 85 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 73 ? LEU A 75 ? GLY A 73 LEU A 75 5 ? 3 HELX_P HELX_P2 2 GLY B 73 ? LEU B 75 ? GLY B 73 LEU B 75 5 ? 3 HELX_P HELX_P3 3 GLY C 73 ? LEU C 75 ? GLY C 73 LEU C 75 5 ? 3 HELX_P HELX_P4 4 GLY D 73 ? LEU D 75 ? GLY D 73 LEU D 75 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 22 ? VAL A 23 ? GLY A 22 VAL A 23 A 2 ILE A 36 ? ARG A 39 ? ILE A 36 ARG A 39 A 3 LEU A 59 ? ALA A 61 ? LEU A 59 ALA A 61 A 4 VAL A 51 ? MET A 53 ? VAL A 51 MET A 53 B 1 VAL A 30 ? VAL A 31 ? VAL A 30 VAL A 31 B 2 GLY A 65 ? ASP A 71 ? GLY A 65 ASP A 71 B 3 ARG A 77 ? PRO A 83 ? ARG A 77 PRO A 83 B 4 LYS A 46 ? PRO A 47 ? LYS A 46 PRO A 47 C 1 GLY B 22 ? VAL B 23 ? GLY B 22 VAL B 23 C 2 ILE B 36 ? ARG B 39 ? ILE B 36 ARG B 39 C 3 LEU B 59 ? ALA B 61 ? LEU B 59 ALA B 61 C 4 VAL B 51 ? MET B 53 ? VAL B 51 MET B 53 D 1 VAL B 30 ? VAL B 31 ? VAL B 30 VAL B 31 D 2 GLY B 65 ? ASP B 71 ? GLY B 65 ASP B 71 D 3 ARG B 77 ? PRO B 83 ? ARG B 77 PRO B 83 D 4 LYS B 46 ? PRO B 47 ? LYS B 46 PRO B 47 E 1 GLY C 22 ? VAL C 23 ? GLY C 22 VAL C 23 E 2 ILE C 36 ? ARG C 39 ? ILE C 36 ARG C 39 E 3 LEU C 59 ? ALA C 61 ? LEU C 59 ALA C 61 E 4 VAL C 51 ? MET C 53 ? VAL C 51 MET C 53 F 1 VAL C 30 ? VAL C 31 ? VAL C 30 VAL C 31 F 2 GLY C 65 ? ASP C 71 ? GLY C 65 ASP C 71 F 3 ARG C 77 ? PRO C 83 ? ARG C 77 PRO C 83 F 4 PHE C 45 ? PRO C 47 ? PHE C 45 PRO C 47 G 1 GLY D 22 ? VAL D 23 ? GLY D 22 VAL D 23 G 2 ILE D 36 ? ARG D 39 ? ILE D 36 ARG D 39 G 3 LEU D 59 ? ALA D 61 ? LEU D 59 ALA D 61 G 4 VAL D 51 ? MET D 53 ? VAL D 51 MET D 53 H 1 VAL D 30 ? VAL D 31 ? VAL D 30 VAL D 31 H 2 GLY D 65 ? ASP D 71 ? GLY D 65 ASP D 71 H 3 ARG D 77 ? PRO D 83 ? ARG D 77 PRO D 83 H 4 PHE D 45 ? PRO D 47 ? PHE D 45 PRO D 47 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 22 ? N GLY A 22 O ARG A 39 ? O ARG A 39 A 2 3 N VAL A 38 ? N VAL A 38 O LEU A 59 ? O LEU A 59 A 3 4 O PHE A 60 ? O PHE A 60 N GLY A 52 ? N GLY A 52 B 1 2 N VAL A 31 ? N VAL A 31 O GLY A 65 ? O GLY A 65 B 2 3 N GLN A 70 ? N GLN A 70 O TYR A 78 ? O TYR A 78 B 3 4 O VAL A 79 ? O VAL A 79 N LYS A 46 ? N LYS A 46 C 1 2 N GLY B 22 ? N GLY B 22 O ARG B 39 ? O ARG B 39 C 2 3 N VAL B 38 ? N VAL B 38 O LEU B 59 ? O LEU B 59 C 3 4 O PHE B 60 ? O PHE B 60 N GLY B 52 ? N GLY B 52 D 1 2 N VAL B 31 ? N VAL B 31 O GLY B 65 ? O GLY B 65 D 2 3 N GLU B 68 ? N GLU B 68 O HIS B 80 ? O HIS B 80 D 3 4 O ARG B 77 ? O ARG B 77 N LYS B 46 ? N LYS B 46 E 1 2 N GLY C 22 ? N GLY C 22 O ARG C 39 ? O ARG C 39 E 2 3 N VAL C 38 ? N VAL C 38 O LEU C 59 ? O LEU C 59 E 3 4 O PHE C 60 ? O PHE C 60 N GLY C 52 ? N GLY C 52 F 1 2 N VAL C 31 ? N VAL C 31 O GLY C 65 ? O GLY C 65 F 2 3 N GLU C 68 ? N GLU C 68 O HIS C 80 ? O HIS C 80 F 3 4 O ARG C 77 ? O ARG C 77 N LYS C 46 ? N LYS C 46 G 1 2 N GLY D 22 ? N GLY D 22 O ARG D 39 ? O ARG D 39 G 2 3 N VAL D 38 ? N VAL D 38 O LEU D 59 ? O LEU D 59 G 3 4 O PHE D 60 ? O PHE D 60 N GLY D 52 ? N GLY D 52 H 1 2 N VAL D 31 ? N VAL D 31 O GLY D 65 ? O GLY D 65 H 2 3 N GLU D 68 ? N GLU D 68 O HIS D 80 ? O HIS D 80 H 3 4 O ARG D 77 ? O ARG D 77 N LYS D 46 ? N LYS D 46 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id D _struct_site.pdbx_auth_comp_id DTT _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE DTT D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PHE A 69 ? PHE A 69 . ? 1_555 ? 2 AC1 7 GLN A 70 ? GLN A 70 . ? 1_555 ? 3 AC1 7 ASP A 71 ? ASP A 71 . ? 1_555 ? 4 AC1 7 ARG B 32 ? ARG B 32 . ? 4_565 ? 5 AC1 7 THR D 43 ? THR D 43 . ? 1_555 ? 6 AC1 7 LYS D 46 ? LYS D 46 . ? 1_555 ? 7 AC1 7 ARG D 74 ? ARG D 74 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 43 ? ? -95.14 55.15 2 1 THR B 43 ? ? -98.12 59.22 3 1 ASP B 56 ? ? -90.80 30.61 4 1 PHE B 57 ? ? 53.37 5.81 5 1 THR C 43 ? ? -109.94 55.35 6 1 THR D 43 ? ? -89.46 44.99 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? D DTT 101 ? 'WRONG HAND' . 2 1 C3 ? D DTT 101 ? 'WRONG HAND' . # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A LEU 7 ? A LEU 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A SER 9 ? A SER 9 10 1 Y 1 A THR 10 ? A THR 10 11 1 Y 1 A ARG 11 ? A ARG 11 12 1 Y 1 A ASN 12 ? A ASN 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A ARG 14 ? A ARG 14 15 1 Y 1 A ASP 15 ? A ASP 15 16 1 Y 1 A SER 16 ? A SER 16 17 1 Y 1 A GLN 17 ? A GLN 17 18 1 Y 1 A ALA 18 ? A ALA 18 19 1 Y 1 A LYS 19 ? A LYS 19 20 1 Y 1 B MET 1 ? B MET 1 21 1 Y 1 B ALA 2 ? B ALA 2 22 1 Y 1 B HIS 3 ? B HIS 3 23 1 Y 1 B LYS 4 ? B LYS 4 24 1 Y 1 B LYS 5 ? B LYS 5 25 1 Y 1 B GLY 6 ? B GLY 6 26 1 Y 1 B LEU 7 ? B LEU 7 27 1 Y 1 B GLY 8 ? B GLY 8 28 1 Y 1 B SER 9 ? B SER 9 29 1 Y 1 B THR 10 ? B THR 10 30 1 Y 1 B ARG 11 ? B ARG 11 31 1 Y 1 B ASN 12 ? B ASN 12 32 1 Y 1 B GLY 13 ? B GLY 13 33 1 Y 1 B ARG 14 ? B ARG 14 34 1 Y 1 B ASP 15 ? B ASP 15 35 1 Y 1 B SER 16 ? B SER 16 36 1 Y 1 B GLN 17 ? B GLN 17 37 1 Y 1 B ALA 18 ? B ALA 18 38 1 Y 1 B LYS 19 ? B LYS 19 39 1 Y 1 C MET 1 ? C MET 1 40 1 Y 1 C ALA 2 ? C ALA 2 41 1 Y 1 C HIS 3 ? C HIS 3 42 1 Y 1 C LYS 4 ? C LYS 4 43 1 Y 1 C LYS 5 ? C LYS 5 44 1 Y 1 C GLY 6 ? C GLY 6 45 1 Y 1 C LEU 7 ? C LEU 7 46 1 Y 1 C GLY 8 ? C GLY 8 47 1 Y 1 C SER 9 ? C SER 9 48 1 Y 1 C THR 10 ? C THR 10 49 1 Y 1 C ARG 11 ? C ARG 11 50 1 Y 1 C ASN 12 ? C ASN 12 51 1 Y 1 C GLY 13 ? C GLY 13 52 1 Y 1 C ARG 14 ? C ARG 14 53 1 Y 1 C ASP 15 ? C ASP 15 54 1 Y 1 C SER 16 ? C SER 16 55 1 Y 1 C GLN 17 ? C GLN 17 56 1 Y 1 C ALA 18 ? C ALA 18 57 1 Y 1 C LYS 19 ? C LYS 19 58 1 Y 1 D MET 1 ? D MET 1 59 1 Y 1 D ALA 2 ? D ALA 2 60 1 Y 1 D HIS 3 ? D HIS 3 61 1 Y 1 D LYS 4 ? D LYS 4 62 1 Y 1 D LYS 5 ? D LYS 5 63 1 Y 1 D GLY 6 ? D GLY 6 64 1 Y 1 D LEU 7 ? D LEU 7 65 1 Y 1 D GLY 8 ? D GLY 8 66 1 Y 1 D SER 9 ? D SER 9 67 1 Y 1 D THR 10 ? D THR 10 68 1 Y 1 D ARG 11 ? D ARG 11 69 1 Y 1 D ASN 12 ? D ASN 12 70 1 Y 1 D GLY 13 ? D GLY 13 71 1 Y 1 D ARG 14 ? D ARG 14 72 1 Y 1 D ASP 15 ? D ASP 15 73 1 Y 1 D SER 16 ? D SER 16 74 1 Y 1 D GLN 17 ? D GLN 17 75 1 Y 1 D ALA 18 ? D ALA 18 76 1 Y 1 D LYS 19 ? D LYS 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DTT S1 S N N 74 DTT C1 C N N 75 DTT C2 C N R 76 DTT O2 O N N 77 DTT C3 C N R 78 DTT O3 O N N 79 DTT C4 C N N 80 DTT S4 S N N 81 DTT HS1 H N N 82 DTT H11 H N N 83 DTT H12 H N N 84 DTT H2 H N N 85 DTT HO2 H N N 86 DTT H3 H N N 87 DTT HO3 H N N 88 DTT H41 H N N 89 DTT H42 H N N 90 DTT HS2 H N N 91 GLN N N N N 92 GLN CA C N S 93 GLN C C N N 94 GLN O O N N 95 GLN CB C N N 96 GLN CG C N N 97 GLN CD C N N 98 GLN OE1 O N N 99 GLN NE2 N N N 100 GLN OXT O N N 101 GLN H H N N 102 GLN H2 H N N 103 GLN HA H N N 104 GLN HB2 H N N 105 GLN HB3 H N N 106 GLN HG2 H N N 107 GLN HG3 H N N 108 GLN HE21 H N N 109 GLN HE22 H N N 110 GLN HXT H N N 111 GLU N N N N 112 GLU CA C N S 113 GLU C C N N 114 GLU O O N N 115 GLU CB C N N 116 GLU CG C N N 117 GLU CD C N N 118 GLU OE1 O N N 119 GLU OE2 O N N 120 GLU OXT O N N 121 GLU H H N N 122 GLU H2 H N N 123 GLU HA H N N 124 GLU HB2 H N N 125 GLU HB3 H N N 126 GLU HG2 H N N 127 GLU HG3 H N N 128 GLU HE2 H N N 129 GLU HXT H N N 130 GLY N N N N 131 GLY CA C N N 132 GLY C C N N 133 GLY O O N N 134 GLY OXT O N N 135 GLY H H N N 136 GLY H2 H N N 137 GLY HA2 H N N 138 GLY HA3 H N N 139 GLY HXT H N N 140 HIS N N N N 141 HIS CA C N S 142 HIS C C N N 143 HIS O O N N 144 HIS CB C N N 145 HIS CG C Y N 146 HIS ND1 N Y N 147 HIS CD2 C Y N 148 HIS CE1 C Y N 149 HIS NE2 N Y N 150 HIS OXT O N N 151 HIS H H N N 152 HIS H2 H N N 153 HIS HA H N N 154 HIS HB2 H N N 155 HIS HB3 H N N 156 HIS HD1 H N N 157 HIS HD2 H N N 158 HIS HE1 H N N 159 HIS HE2 H N N 160 HIS HXT H N N 161 HOH O O N N 162 HOH H1 H N N 163 HOH H2 H N N 164 ILE N N N N 165 ILE CA C N S 166 ILE C C N N 167 ILE O O N N 168 ILE CB C N S 169 ILE CG1 C N N 170 ILE CG2 C N N 171 ILE CD1 C N N 172 ILE OXT O N N 173 ILE H H N N 174 ILE H2 H N N 175 ILE HA H N N 176 ILE HB H N N 177 ILE HG12 H N N 178 ILE HG13 H N N 179 ILE HG21 H N N 180 ILE HG22 H N N 181 ILE HG23 H N N 182 ILE HD11 H N N 183 ILE HD12 H N N 184 ILE HD13 H N N 185 ILE HXT H N N 186 LEU N N N N 187 LEU CA C N S 188 LEU C C N N 189 LEU O O N N 190 LEU CB C N N 191 LEU CG C N N 192 LEU CD1 C N N 193 LEU CD2 C N N 194 LEU OXT O N N 195 LEU H H N N 196 LEU H2 H N N 197 LEU HA H N N 198 LEU HB2 H N N 199 LEU HB3 H N N 200 LEU HG H N N 201 LEU HD11 H N N 202 LEU HD12 H N N 203 LEU HD13 H N N 204 LEU HD21 H N N 205 LEU HD22 H N N 206 LEU HD23 H N N 207 LEU HXT H N N 208 LYS N N N N 209 LYS CA C N S 210 LYS C C N N 211 LYS O O N N 212 LYS CB C N N 213 LYS CG C N N 214 LYS CD C N N 215 LYS CE C N N 216 LYS NZ N N N 217 LYS OXT O N N 218 LYS H H N N 219 LYS H2 H N N 220 LYS HA H N N 221 LYS HB2 H N N 222 LYS HB3 H N N 223 LYS HG2 H N N 224 LYS HG3 H N N 225 LYS HD2 H N N 226 LYS HD3 H N N 227 LYS HE2 H N N 228 LYS HE3 H N N 229 LYS HZ1 H N N 230 LYS HZ2 H N N 231 LYS HZ3 H N N 232 LYS HXT H N N 233 MET N N N N 234 MET CA C N S 235 MET C C N N 236 MET O O N N 237 MET CB C N N 238 MET CG C N N 239 MET SD S N N 240 MET CE C N N 241 MET OXT O N N 242 MET H H N N 243 MET H2 H N N 244 MET HA H N N 245 MET HB2 H N N 246 MET HB3 H N N 247 MET HG2 H N N 248 MET HG3 H N N 249 MET HE1 H N N 250 MET HE2 H N N 251 MET HE3 H N N 252 MET HXT H N N 253 PHE N N N N 254 PHE CA C N S 255 PHE C C N N 256 PHE O O N N 257 PHE CB C N N 258 PHE CG C Y N 259 PHE CD1 C Y N 260 PHE CD2 C Y N 261 PHE CE1 C Y N 262 PHE CE2 C Y N 263 PHE CZ C Y N 264 PHE OXT O N N 265 PHE H H N N 266 PHE H2 H N N 267 PHE HA H N N 268 PHE HB2 H N N 269 PHE HB3 H N N 270 PHE HD1 H N N 271 PHE HD2 H N N 272 PHE HE1 H N N 273 PHE HE2 H N N 274 PHE HZ H N N 275 PHE HXT H N N 276 PRO N N N N 277 PRO CA C N S 278 PRO C C N N 279 PRO O O N N 280 PRO CB C N N 281 PRO CG C N N 282 PRO CD C N N 283 PRO OXT O N N 284 PRO H H N N 285 PRO HA H N N 286 PRO HB2 H N N 287 PRO HB3 H N N 288 PRO HG2 H N N 289 PRO HG3 H N N 290 PRO HD2 H N N 291 PRO HD3 H N N 292 PRO HXT H N N 293 SER N N N N 294 SER CA C N S 295 SER C C N N 296 SER O O N N 297 SER CB C N N 298 SER OG O N N 299 SER OXT O N N 300 SER H H N N 301 SER H2 H N N 302 SER HA H N N 303 SER HB2 H N N 304 SER HB3 H N N 305 SER HG H N N 306 SER HXT H N N 307 THR N N N N 308 THR CA C N S 309 THR C C N N 310 THR O O N N 311 THR CB C N R 312 THR OG1 O N N 313 THR CG2 C N N 314 THR OXT O N N 315 THR H H N N 316 THR H2 H N N 317 THR HA H N N 318 THR HB H N N 319 THR HG1 H N N 320 THR HG21 H N N 321 THR HG22 H N N 322 THR HG23 H N N 323 THR HXT H N N 324 TYR N N N N 325 TYR CA C N S 326 TYR C C N N 327 TYR O O N N 328 TYR CB C N N 329 TYR CG C Y N 330 TYR CD1 C Y N 331 TYR CD2 C Y N 332 TYR CE1 C Y N 333 TYR CE2 C Y N 334 TYR CZ C Y N 335 TYR OH O N N 336 TYR OXT O N N 337 TYR H H N N 338 TYR H2 H N N 339 TYR HA H N N 340 TYR HB2 H N N 341 TYR HB3 H N N 342 TYR HD1 H N N 343 TYR HD2 H N N 344 TYR HE1 H N N 345 TYR HE2 H N N 346 TYR HH H N N 347 TYR HXT H N N 348 VAL N N N N 349 VAL CA C N S 350 VAL C C N N 351 VAL O O N N 352 VAL CB C N N 353 VAL CG1 C N N 354 VAL CG2 C N N 355 VAL OXT O N N 356 VAL H H N N 357 VAL H2 H N N 358 VAL HA H N N 359 VAL HB H N N 360 VAL HG11 H N N 361 VAL HG12 H N N 362 VAL HG13 H N N 363 VAL HG21 H N N 364 VAL HG22 H N N 365 VAL HG23 H N N 366 VAL HXT H N N 367 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DTT S1 C1 sing N N 70 DTT S1 HS1 sing N N 71 DTT C1 C2 sing N N 72 DTT C1 H11 sing N N 73 DTT C1 H12 sing N N 74 DTT C2 O2 sing N N 75 DTT C2 C3 sing N N 76 DTT C2 H2 sing N N 77 DTT O2 HO2 sing N N 78 DTT C3 O3 sing N N 79 DTT C3 C4 sing N N 80 DTT C3 H3 sing N N 81 DTT O3 HO3 sing N N 82 DTT C4 S4 sing N N 83 DTT C4 H41 sing N N 84 DTT C4 H42 sing N N 85 DTT S4 HS2 sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _atom_sites.entry_id 1V8Q _atom_sites.fract_transf_matrix[1][1] 0.020600 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020600 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007188 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_