HEADER OXIDOREDUCTASE 01-DEC-03 1VI2 TITLE CRYSTAL STRUCTURE OF SHIKIMATE-5-DEHYDROGENASE WITH NAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHIKIMATE 5-DEHYDROGENASE 2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.25; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YDIB, B1692, C2087; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR STRUCTURAL GENOMIX REVDAT 4 27-DEC-23 1VI2 1 REMARK LINK REVDAT 3 24-FEB-09 1VI2 1 VERSN REVDAT 2 30-AUG-05 1VI2 1 JRNL REVDAT 1 30-DEC-03 1VI2 0 JRNL AUTH J.BADGER,J.M.SAUDER,J.M.ADAMS,S.ANTONYSAMY,K.BAIN, JRNL AUTH 2 M.G.BERGSEID,S.G.BUCHANAN,M.D.BUCHANAN,Y.BATIYENKO, JRNL AUTH 3 J.A.CHRISTOPHER,S.EMTAGE,A.EROSHKINA,I.FEIL,E.B.FURLONG, JRNL AUTH 4 K.S.GAJIWALA,X.GAO,D.HE,J.HENDLE,A.HUBER,K.HODA,P.KEARINS, JRNL AUTH 5 C.KISSINGER,B.LAUBERT,H.A.LEWIS,J.LIN,K.LOOMIS,D.LORIMER, JRNL AUTH 6 G.LOUIE,M.MALETIC,C.D.MARSH,I.MILLER,J.MOLINARI, JRNL AUTH 7 H.J.MULLER-DIECKMANN,J.M.NEWMAN,B.W.NOLAND,B.PAGARIGAN, JRNL AUTH 8 F.PARK,T.S.PEAT,K.W.POST,S.RADOJICIC,A.RAMOS,R.ROMERO, JRNL AUTH 9 M.E.RUTTER,W.E.SANDERSON,K.D.SCHWINN,J.TRESSER,J.WINHOVEN, JRNL AUTH10 T.A.WRIGHT,L.WU,J.XU,T.J.HARRIS JRNL TITL STRUCTURAL ANALYSIS OF A SET OF PROTEINS RESULTING FROM A JRNL TITL 2 BACTERIAL GENOMICS PROJECT JRNL REF PROTEINS V. 60 787 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 16021622 JRNL DOI 10.1002/PROT.20541 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 4.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 32984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1674 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4261 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 275 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60600 REMARK 3 B22 (A**2) : -0.60600 REMARK 3 B33 (A**2) : 0.90900 REMARK 3 B12 (A**2) : -0.30300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.014 ; NULL REMARK 3 ANGLE DISTANCE (A) : 2.045 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.016 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.123 ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 3.123 ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.881 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.215 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 3.472 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.855 ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000001892. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418, 0.9795 , 0.9641 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32986 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 38.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.790 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.17600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SE-MET MAD PHASING REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.25700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.51400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.25700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.51400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 ASP A 2 REMARK 465 VAL A 3 REMARK 465 THR A 4 REMARK 465 GLU A 289 REMARK 465 GLY A 290 REMARK 465 GLY A 291 REMARK 465 SER A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 MSE B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ASP B 2 REMARK 465 VAL B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 288 REMARK 465 GLU B 289 REMARK 465 GLY B 290 REMARK 465 GLY B 291 REMARK 465 SER B 292 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 465 HIS B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 169 CG CD OE1 NE2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 GLN A 246 CG CD OE1 NE2 REMARK 470 LYS B 163 CG CD CE NZ REMARK 470 SER B 221 OG REMARK 470 LEU B 222 CG CD1 CD2 REMARK 470 PRO B 225 CG CD REMARK 470 LEU B 227 CG CD1 CD2 REMARK 470 GLN B 243 CG CD OE1 NE2 REMARK 470 GLN B 247 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 15 119.17 -160.09 REMARK 500 ASP A 45 -164.02 -113.02 REMARK 500 ALA A 132 21.19 -147.88 REMARK 500 LYS A 152 79.45 -103.08 REMARK 500 ASP A 158 -152.02 -114.85 REMARK 500 ASP A 186 83.73 -68.74 REMARK 500 LEU A 211 20.99 -66.03 REMARK 500 GLU A 212 -8.86 -59.09 REMARK 500 ASN A 213 50.30 -108.23 REMARK 500 GLN A 247 40.40 -105.66 REMARK 500 ALA A 248 4.11 -160.83 REMARK 500 TYR B 15 117.03 -165.47 REMARK 500 ALA B 132 21.45 -147.40 REMARK 500 ASP B 158 -152.25 -123.97 REMARK 500 ALA B 195 -51.69 -23.31 REMARK 500 PRO B 210 37.49 -88.38 REMARK 500 PRO B 225 92.86 -39.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY B 110 10.29 REMARK 500 SER B 196 13.62 REMARK 500 HIS B 224 -12.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 300 DBREF 1VI2 A 2 288 UNP P0A6D5 YDIB_ECOLI 2 288 DBREF 1VI2 B 2 288 UNP P0A6D5 YDIB_ECOLI 2 288 SEQADV 1VI2 MSE A -1 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 SER A 0 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 LEU A 1 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 MSE A 13 UNP P0A6D5 MET 13 MODIFIED RESIDUE SEQADV 1VI2 MSE A 25 UNP P0A6D5 MET 25 MODIFIED RESIDUE SEQADV 1VI2 MSE A 40 UNP P0A6D5 MET 40 MODIFIED RESIDUE SEQADV 1VI2 MSE A 61 UNP P0A6D5 MET 61 MODIFIED RESIDUE SEQADV 1VI2 MSE A 68 UNP P0A6D5 MET 68 MODIFIED RESIDUE SEQADV 1VI2 MSE A 127 UNP P0A6D5 MET 127 MODIFIED RESIDUE SEQADV 1VI2 MSE A 208 UNP P0A6D5 MET 208 MODIFIED RESIDUE SEQADV 1VI2 MSE A 238 UNP P0A6D5 MET 238 MODIFIED RESIDUE SEQADV 1VI2 MSE A 258 UNP P0A6D5 MET 258 MODIFIED RESIDUE SEQADV 1VI2 MSE A 284 UNP P0A6D5 MET 284 MODIFIED RESIDUE SEQADV 1VI2 GLU A 289 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 GLY A 290 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 GLY A 291 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 SER A 292 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 293 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 294 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 295 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 296 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 297 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS A 298 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 MSE B -1 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 SER B 0 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 LEU B 1 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 MSE B 13 UNP P0A6D5 MET 13 MODIFIED RESIDUE SEQADV 1VI2 MSE B 25 UNP P0A6D5 MET 25 MODIFIED RESIDUE SEQADV 1VI2 MSE B 40 UNP P0A6D5 MET 40 MODIFIED RESIDUE SEQADV 1VI2 MSE B 61 UNP P0A6D5 MET 61 MODIFIED RESIDUE SEQADV 1VI2 MSE B 68 UNP P0A6D5 MET 68 MODIFIED RESIDUE SEQADV 1VI2 MSE B 127 UNP P0A6D5 MET 127 MODIFIED RESIDUE SEQADV 1VI2 MSE B 208 UNP P0A6D5 MET 208 MODIFIED RESIDUE SEQADV 1VI2 MSE B 238 UNP P0A6D5 MET 238 MODIFIED RESIDUE SEQADV 1VI2 MSE B 258 UNP P0A6D5 MET 258 MODIFIED RESIDUE SEQADV 1VI2 MSE B 284 UNP P0A6D5 MET 284 MODIFIED RESIDUE SEQADV 1VI2 GLU B 289 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 GLY B 290 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 GLY B 291 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 SER B 292 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 293 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 294 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 295 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 296 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 297 UNP P0A6D5 CLONING ARTIFACT SEQADV 1VI2 HIS B 298 UNP P0A6D5 CLONING ARTIFACT SEQRES 1 A 300 MSE SER LEU ASP VAL THR ALA LYS TYR GLU LEU ILE GLY SEQRES 2 A 300 LEU MSE ALA TYR PRO ILE ARG HIS SER LEU SER PRO GLU SEQRES 3 A 300 MSE GLN ASN LYS ALA LEU GLU LYS ALA GLY LEU PRO PHE SEQRES 4 A 300 THR TYR MSE ALA PHE GLU VAL ASP ASN ASP SER PHE PRO SEQRES 5 A 300 GLY ALA ILE GLU GLY LEU LYS ALA LEU LYS MSE ARG GLY SEQRES 6 A 300 THR GLY VAL SER MSE PRO ASN LYS GLN LEU ALA CYS GLU SEQRES 7 A 300 TYR VAL ASP GLU LEU THR PRO ALA ALA LYS LEU VAL GLY SEQRES 8 A 300 ALA ILE ASN THR ILE VAL ASN ASP ASP GLY TYR LEU ARG SEQRES 9 A 300 GLY TYR ASN THR ASP GLY THR GLY HIS ILE ARG ALA ILE SEQRES 10 A 300 LYS GLU SER GLY PHE ASP ILE LYS GLY LYS THR MSE VAL SEQRES 11 A 300 LEU LEU GLY ALA GLY GLY ALA SER THR ALA ILE GLY ALA SEQRES 12 A 300 GLN GLY ALA ILE GLU GLY LEU LYS GLU ILE LYS LEU PHE SEQRES 13 A 300 ASN ARG ARG ASP GLU PHE PHE ASP LYS ALA LEU ALA PHE SEQRES 14 A 300 ALA GLN ARG VAL ASN GLU ASN THR ASP CYS VAL VAL THR SEQRES 15 A 300 VAL THR ASP LEU ALA ASP GLN GLN ALA PHE ALA GLU ALA SEQRES 16 A 300 LEU ALA SER ALA ASP ILE LEU THR ASN GLY THR LYS VAL SEQRES 17 A 300 GLY MSE LYS PRO LEU GLU ASN GLU SER LEU VAL ASN ASP SEQRES 18 A 300 ILE SER LEU LEU HIS PRO GLY LEU LEU VAL THR GLU CYS SEQRES 19 A 300 VAL TYR ASN PRO HIS MSE THR LYS LEU LEU GLN GLN ALA SEQRES 20 A 300 GLN GLN ALA GLY CYS LYS THR ILE ASP GLY TYR GLY MSE SEQRES 21 A 300 LEU LEU TRP GLN GLY ALA GLU GLN PHE THR LEU TRP THR SEQRES 22 A 300 GLY LYS ASP PHE PRO LEU GLU TYR VAL LYS GLN VAL MSE SEQRES 23 A 300 GLY PHE GLY ALA GLU GLY GLY SER HIS HIS HIS HIS HIS SEQRES 24 A 300 HIS SEQRES 1 B 300 MSE SER LEU ASP VAL THR ALA LYS TYR GLU LEU ILE GLY SEQRES 2 B 300 LEU MSE ALA TYR PRO ILE ARG HIS SER LEU SER PRO GLU SEQRES 3 B 300 MSE GLN ASN LYS ALA LEU GLU LYS ALA GLY LEU PRO PHE SEQRES 4 B 300 THR TYR MSE ALA PHE GLU VAL ASP ASN ASP SER PHE PRO SEQRES 5 B 300 GLY ALA ILE GLU GLY LEU LYS ALA LEU LYS MSE ARG GLY SEQRES 6 B 300 THR GLY VAL SER MSE PRO ASN LYS GLN LEU ALA CYS GLU SEQRES 7 B 300 TYR VAL ASP GLU LEU THR PRO ALA ALA LYS LEU VAL GLY SEQRES 8 B 300 ALA ILE ASN THR ILE VAL ASN ASP ASP GLY TYR LEU ARG SEQRES 9 B 300 GLY TYR ASN THR ASP GLY THR GLY HIS ILE ARG ALA ILE SEQRES 10 B 300 LYS GLU SER GLY PHE ASP ILE LYS GLY LYS THR MSE VAL SEQRES 11 B 300 LEU LEU GLY ALA GLY GLY ALA SER THR ALA ILE GLY ALA SEQRES 12 B 300 GLN GLY ALA ILE GLU GLY LEU LYS GLU ILE LYS LEU PHE SEQRES 13 B 300 ASN ARG ARG ASP GLU PHE PHE ASP LYS ALA LEU ALA PHE SEQRES 14 B 300 ALA GLN ARG VAL ASN GLU ASN THR ASP CYS VAL VAL THR SEQRES 15 B 300 VAL THR ASP LEU ALA ASP GLN GLN ALA PHE ALA GLU ALA SEQRES 16 B 300 LEU ALA SER ALA ASP ILE LEU THR ASN GLY THR LYS VAL SEQRES 17 B 300 GLY MSE LYS PRO LEU GLU ASN GLU SER LEU VAL ASN ASP SEQRES 18 B 300 ILE SER LEU LEU HIS PRO GLY LEU LEU VAL THR GLU CYS SEQRES 19 B 300 VAL TYR ASN PRO HIS MSE THR LYS LEU LEU GLN GLN ALA SEQRES 20 B 300 GLN GLN ALA GLY CYS LYS THR ILE ASP GLY TYR GLY MSE SEQRES 21 B 300 LEU LEU TRP GLN GLY ALA GLU GLN PHE THR LEU TRP THR SEQRES 22 B 300 GLY LYS ASP PHE PRO LEU GLU TYR VAL LYS GLN VAL MSE SEQRES 23 B 300 GLY PHE GLY ALA GLU GLY GLY SER HIS HIS HIS HIS HIS SEQRES 24 B 300 HIS MODRES 1VI2 MSE A 13 MET SELENOMETHIONINE MODRES 1VI2 MSE A 25 MET SELENOMETHIONINE MODRES 1VI2 MSE A 40 MET SELENOMETHIONINE MODRES 1VI2 MSE A 61 MET SELENOMETHIONINE MODRES 1VI2 MSE A 68 MET SELENOMETHIONINE MODRES 1VI2 MSE A 127 MET SELENOMETHIONINE MODRES 1VI2 MSE A 208 MET SELENOMETHIONINE MODRES 1VI2 MSE A 238 MET SELENOMETHIONINE MODRES 1VI2 MSE A 258 MET SELENOMETHIONINE MODRES 1VI2 MSE A 284 MET SELENOMETHIONINE MODRES 1VI2 MSE B 13 MET SELENOMETHIONINE MODRES 1VI2 MSE B 25 MET SELENOMETHIONINE MODRES 1VI2 MSE B 40 MET SELENOMETHIONINE MODRES 1VI2 MSE B 61 MET SELENOMETHIONINE MODRES 1VI2 MSE B 68 MET SELENOMETHIONINE MODRES 1VI2 MSE B 127 MET SELENOMETHIONINE MODRES 1VI2 MSE B 208 MET SELENOMETHIONINE MODRES 1VI2 MSE B 238 MET SELENOMETHIONINE MODRES 1VI2 MSE B 258 MET SELENOMETHIONINE MODRES 1VI2 MSE B 284 MET SELENOMETHIONINE HET MSE A 13 8 HET MSE A 25 8 HET MSE A 40 8 HET MSE A 61 8 HET MSE A 68 11 HET MSE A 127 8 HET MSE A 208 8 HET MSE A 238 8 HET MSE A 258 8 HET MSE A 284 8 HET MSE B 13 8 HET MSE B 25 8 HET MSE B 40 8 HET MSE B 61 8 HET MSE B 68 8 HET MSE B 127 9 HET MSE B 208 8 HET MSE B 238 8 HET MSE B 258 8 HET MSE B 284 8 HET SO4 A 299 5 HET NAD A 300 44 HET SO4 B 299 5 HET NAD B 300 44 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 NAD 2(C21 H27 N7 O14 P2) FORMUL 7 HOH *275(H2 O) HELIX 1 1 LEU A 21 ALA A 33 1 13 HELIX 2 2 SER A 48 LEU A 59 1 12 HELIX 3 3 GLN A 72 VAL A 78 5 7 HELIX 4 4 THR A 82 GLY A 89 1 8 HELIX 5 5 ASN A 105 SER A 118 1 14 HELIX 6 6 GLY A 133 GLU A 146 1 14 HELIX 7 7 PHE A 160 THR A 175 1 16 HELIX 8 8 ASP A 186 SER A 196 1 11 HELIX 9 9 ASP A 219 LEU A 223 5 5 HELIX 10 10 THR A 239 GLN A 247 1 9 HELIX 11 11 ASP A 254 GLY A 272 1 19 HELIX 12 12 PRO A 276 GLY A 285 1 10 HELIX 13 13 LEU B 21 ALA B 33 1 13 HELIX 14 14 SER B 48 LYS B 60 1 13 HELIX 15 15 ASN B 70 CYS B 75 1 6 HELIX 16 16 GLU B 76 VAL B 78 5 3 HELIX 17 17 THR B 82 GLY B 89 1 8 HELIX 18 18 ASN B 105 SER B 118 1 14 HELIX 19 19 GLY B 133 GLU B 146 1 14 HELIX 20 20 GLU B 159 THR B 175 1 17 HELIX 21 21 ASP B 186 SER B 196 1 11 HELIX 22 22 ASP B 219 LEU B 223 5 5 HELIX 23 23 THR B 239 GLY B 249 1 11 HELIX 24 24 ASP B 254 GLY B 272 1 19 HELIX 25 25 PRO B 276 MSE B 284 1 9 SHEET 1 A 6 PHE A 37 GLU A 43 0 SHEET 2 A 6 GLU A 8 ALA A 14 1 N ILE A 10 O THR A 38 SHEET 3 A 6 GLY A 63 VAL A 66 1 O GLY A 65 N GLY A 11 SHEET 4 A 6 THR A 93 ASP A 97 -1 O ILE A 94 N THR A 64 SHEET 5 A 6 TYR A 100 TYR A 104 -1 O TYR A 100 N ASP A 97 SHEET 6 A 6 GLU A 80 LEU A 81 1 N GLU A 80 O GLY A 103 SHEET 1 B 6 VAL A 178 ASP A 183 0 SHEET 2 B 6 GLU A 150 ASN A 155 1 N LEU A 153 O THR A 182 SHEET 3 B 6 THR A 126 LEU A 130 1 N MSE A 127 O LYS A 152 SHEET 4 B 6 ILE A 199 ASN A 202 1 O ILE A 199 N VAL A 128 SHEET 5 B 6 LEU A 228 GLU A 231 1 O LEU A 228 N LEU A 200 SHEET 6 B 6 LYS A 251 ILE A 253 1 O LYS A 251 N VAL A 229 SHEET 1 C 6 PHE B 37 GLU B 43 0 SHEET 2 C 6 GLU B 8 ALA B 14 1 N LEU B 12 O PHE B 42 SHEET 3 C 6 GLY B 63 VAL B 66 1 O GLY B 65 N GLY B 11 SHEET 4 C 6 THR B 93 ASP B 97 -1 O ILE B 94 N THR B 64 SHEET 5 C 6 TYR B 100 TYR B 104 -1 O TYR B 100 N ASP B 97 SHEET 6 C 6 GLU B 80 LEU B 81 1 N GLU B 80 O GLY B 103 SHEET 1 D 6 VAL B 178 ASP B 183 0 SHEET 2 D 6 GLU B 150 ASN B 155 1 N ILE B 151 O VAL B 178 SHEET 3 D 6 THR B 126 LEU B 130 1 N MSE B 127 O LYS B 152 SHEET 4 D 6 ILE B 199 ASN B 202 1 O ILE B 199 N VAL B 128 SHEET 5 D 6 LEU B 228 GLU B 231 1 O LEU B 228 N LEU B 200 SHEET 6 D 6 LYS B 251 ILE B 253 1 O ILE B 253 N VAL B 229 LINK C LEU A 12 N MSE A 13 1555 1555 1.33 LINK C MSE A 13 N ALA A 14 1555 1555 1.32 LINK C GLU A 24 N MSE A 25 1555 1555 1.34 LINK C MSE A 25 N GLN A 26 1555 1555 1.34 LINK C TYR A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N ALA A 41 1555 1555 1.31 LINK C LYS A 60 N MSE A 61 1555 1555 1.34 LINK C MSE A 61 N ARG A 62 1555 1555 1.31 LINK C SER A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N PRO A 69 1555 1555 1.32 LINK C THR A 126 N MSE A 127 1555 1555 1.34 LINK C MSE A 127 N VAL A 128 1555 1555 1.32 LINK C GLY A 207 N MSE A 208 1555 1555 1.33 LINK C MSE A 208 N LYS A 209 1555 1555 1.32 LINK C HIS A 237 N MSE A 238 1555 1555 1.33 LINK C MSE A 238 N THR A 239 1555 1555 1.33 LINK C GLY A 257 N MSE A 258 1555 1555 1.33 LINK C MSE A 258 N LEU A 259 1555 1555 1.34 LINK C VAL A 283 N MSE A 284 1555 1555 1.33 LINK C MSE A 284 N GLY A 285 1555 1555 1.34 LINK C LEU B 12 N MSE B 13 1555 1555 1.31 LINK C MSE B 13 N ALA B 14 1555 1555 1.32 LINK C GLU B 24 N MSE B 25 1555 1555 1.34 LINK C MSE B 25 N GLN B 26 1555 1555 1.33 LINK C TYR B 39 N MSE B 40 1555 1555 1.32 LINK C MSE B 40 N ALA B 41 1555 1555 1.32 LINK C LYS B 60 N MSE B 61 1555 1555 1.34 LINK C MSE B 61 N ARG B 62 1555 1555 1.32 LINK C SER B 67 N MSE B 68 1555 1555 1.32 LINK C MSE B 68 N PRO B 69 1555 1555 1.31 LINK C THR B 126 N MSE B 127 1555 1555 1.33 LINK C MSE B 127 N VAL B 128 1555 1555 1.33 LINK C GLY B 207 N MSE B 208 1555 1555 1.34 LINK C MSE B 208 N LYS B 209 1555 1555 1.32 LINK C HIS B 237 N MSE B 238 1555 1555 1.33 LINK C MSE B 238 N THR B 239 1555 1555 1.33 LINK C GLY B 257 N MSE B 258 1555 1555 1.34 LINK C MSE B 258 N LEU B 259 1555 1555 1.33 LINK C VAL B 283 N MSE B 284 1555 1555 1.33 LINK C MSE B 284 N GLY B 285 1555 1555 1.34 CISPEP 1 TYR A 15 PRO A 16 0 -0.21 CISPEP 2 MSE A 68 PRO A 69 0 0.95 CISPEP 3 LYS A 209 PRO A 210 0 0.49 CISPEP 4 ASN A 235 PRO A 236 0 3.32 CISPEP 5 TYR B 15 PRO B 16 0 1.48 CISPEP 6 MSE B 68 PRO B 69 0 2.52 CISPEP 7 LYS B 209 PRO B 210 0 0.21 CISPEP 8 ASN B 235 PRO B 236 0 2.58 SITE 1 AC1 6 SER A 67 MSE A 68 PRO A 69 ASN A 70 SITE 2 AC1 6 LYS A 71 GLN A 72 SITE 1 AC2 7 MSE B 68 PRO B 69 ASN B 70 LYS B 71 SITE 2 AC2 7 GLN B 72 HOH B 316 HOH B 356 SITE 1 AC3 28 GLY A 131 ALA A 132 GLY A 133 GLY A 134 SITE 2 AC3 28 ALA A 135 ASN A 155 ARG A 156 ASP A 158 SITE 3 AC3 28 PHE A 160 GLY A 203 THR A 204 LYS A 205 SITE 4 AC3 28 VAL A 206 MSE A 208 CYS A 232 VAL A 233 SITE 5 AC3 28 TYR A 234 GLY A 255 MSE A 258 LEU A 259 SITE 6 AC3 28 HOH A 313 HOH A 327 HOH A 328 HOH A 329 SITE 7 AC3 28 HOH A 334 HOH A 398 HOH A 399 HOH A 402 SITE 1 AC4 29 ASP B 107 ALA B 132 GLY B 133 GLY B 134 SITE 2 AC4 29 ALA B 135 ASN B 155 ARG B 156 ASP B 158 SITE 3 AC4 29 PHE B 160 GLY B 203 THR B 204 LYS B 205 SITE 4 AC4 29 VAL B 206 MSE B 208 CYS B 232 VAL B 233 SITE 5 AC4 29 TYR B 234 GLY B 255 MSE B 258 LEU B 259 SITE 6 AC4 29 HOH B 304 HOH B 309 HOH B 315 HOH B 335 SITE 7 AC4 29 HOH B 351 HOH B 394 HOH B 400 HOH B 409 SITE 8 AC4 29 HOH B 425 CRYST1 157.497 157.497 39.771 90.00 90.00 120.00 P 64 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006349 0.003666 0.000000 0.00000 SCALE2 0.000000 0.007332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025144 0.00000