HEADER HYDROLASE 27-FEB-97 1VIP TITLE ANTICOAGULANT CLASS II PHOSPHOLIPASE A2 FROM THE VENOM OF VIPERA TITLE 2 RUSSELLI RUSSELLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DABOIA RUSSELLII RUSSELLII; SOURCE 3 ORGANISM_TAXID: 31159; SOURCE 4 STRAIN: RUSSELLII; SOURCE 5 SECRETION: VENOM; SOURCE 6 OTHER_DETAILS: MIAMI SERPENTARIUM KEYWDS HYDROLASE, PHOSPHOLIPASE A2, ANTICOAGULANT EXPDTA X-RAY DIFFRACTION AUTHOR E.CARREDANO,B.WESTERLUND,B.PERSSON,M.SAARINEN,S.RAMASWAMY,D.EAKER, AUTHOR 2 H.EKLUND REVDAT 5 09-AUG-23 1VIP 1 REMARK REVDAT 4 04-APR-18 1VIP 1 REMARK REVDAT 3 13-JUL-11 1VIP 1 VERSN REVDAT 2 24-FEB-09 1VIP 1 VERSN REVDAT 1 16-JUN-97 1VIP 0 JRNL AUTH E.CARREDANO,B.WESTERLUND,B.PERSSON,M.SAARINEN,S.RAMASWAMY, JRNL AUTH 2 D.EAKER,H.EKLUND JRNL TITL THE THREE-DIMENSIONAL STRUCTURES OF TWO TOXINS FROM SNAKE JRNL TITL 2 VENOM THROW LIGHT ON THE ANTICOAGULANT AND NEUROTOXIC SITES JRNL TITL 3 OF PHOSPHOLIPASE A2. JRNL REF TOXICON V. 36 75 1998 JRNL REFN ISSN 0041-0101 JRNL PMID 9604284 JRNL DOI 10.1016/S0041-0101(97)00051-2 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.8 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.1000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 8258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.000 REMARK 3 FREE R VALUE TEST SET COUNT : 658 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 930 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 60 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.042 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 946 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 2.570 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARAM19X.PRO REMARK 3 PARAMETER FILE 2 : PARAM19X.SOL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPH19X.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177050. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-93 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU R-AXIS II REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8258 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.001 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.03900 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.8 REMARK 200 STARTING MODEL: PDB ENTRY 1PP2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 1.4 M REMARK 280 AMSO4,N50 MM AMOAC AND 2 % DIOXANE AT PH 6.25. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X,-Y+1/2,Z REMARK 290 27555 -X+1/2,Y,-Z REMARK 290 28555 X,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z,-X,-Y+1/2 REMARK 290 31555 -Z,-X+1/2,Y REMARK 290 32555 -Z+1/2,X,-Y REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X REMARK 290 35555 Y,-Z,-X+1/2 REMARK 290 36555 -Y,-Z+1/2,X REMARK 290 37555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 38555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 39555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 40555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 41555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 42555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 43555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 44555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 45555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 46555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 47555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 48555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 61.39100 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 61.39100 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 61.39100 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 61.39100 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 61.39100 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 30.69550 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 92.08650 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 92.08650 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 92.08650 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 30.69550 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 92.08650 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 30.69550 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 92.08650 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 30.69550 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 30.69550 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 30.69550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 122.78200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 184.17300 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 30.69550 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 153.47750 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 -30.69550 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 300 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 292 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 293 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 294 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 89 NE2 HIS A 89 CD2 -0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 31 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP A 31 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 67 70.88 56.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: S1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: HYDROLYSIS OF 3-SN-PHOSPHOGLYCERIDES NAT THE 2 REMARK 800 POSITION, N. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 300 DBREF 1VIP A 1 133 UNP P81458 PA2_DABRR 1 121 SEQRES 1 A 121 ASN LEU PHE GLN PHE ALA GLU MET ILE VAL LYS MET THR SEQRES 2 A 121 GLY LYS ASN PRO LEU SER SER TYR SER ASP TYR GLY CYS SEQRES 3 A 121 TYR CYS GLY TRP GLY GLY LYS GLY LYS PRO GLN ASP ALA SEQRES 4 A 121 THR ASP ARG CYS CYS PHE VAL HIS ASP CYS CYS TYR GLU SEQRES 5 A 121 LYS VAL LYS SER CYS LYS PRO LYS LEU SER LEU TYR SER SEQRES 6 A 121 TYR SER PHE GLN ASN GLY GLY ILE VAL CYS GLY ASP ASN SEQRES 7 A 121 HIS SER CYS LYS ARG ALA VAL CYS GLU CYS ASP ARG VAL SEQRES 8 A 121 ALA ALA THR CYS PHE ARG ASP ASN LEU ASN THR TYR ASP SEQRES 9 A 121 LYS LYS TYR HIS ASN TYR PRO PRO SER GLN CYS THR GLY SEQRES 10 A 121 THR GLU GLN CYS HET SO4 A 300 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *94(H2 O) HELIX 1 1 LEU A 2 THR A 13 1 12 HELIX 2 2 PRO A 18 SER A 21 1 4 HELIX 3 3 ALA A 40 CYS A 61 1 19 HELIX 4 4 SER A 90 ASP A 108 1 19 HELIX 5 5 LYS A 115 TYR A 117 5 3 HELIX 6 6 PRO A 122 GLN A 125 5 3 SHEET 1 A 2 TYR A 75 PHE A 77 0 SHEET 2 A 2 ILE A 82 CYS A 84 -1 N VAL A 83 O SER A 76 SSBOND 1 CYS A 27 CYS A 126 1555 1555 2.01 SSBOND 2 CYS A 29 CYS A 45 1555 1555 2.02 SSBOND 3 CYS A 44 CYS A 105 1555 1555 2.01 SSBOND 4 CYS A 50 CYS A 133 1555 1555 2.03 SSBOND 5 CYS A 51 CYS A 98 1555 1555 2.02 SSBOND 6 CYS A 61 CYS A 91 1555 1555 2.01 SSBOND 7 CYS A 84 CYS A 96 1555 1555 2.01 SITE 1 S1 2 HIS A 48 ASP A 99 SITE 1 AC1 3 LYS A 34 THR A 127 GLY A 128 CRYST1 122.782 122.782 122.782 90.00 90.00 90.00 I 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008145 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008145 0.00000