HEADER HYDROLASE, TRANSFERASE 03-FEB-04 1VJ7 TITLE CRYSTAL STRUCTURE OF THE BIFUNCTIONAL CATALYTIC FRAGMENT OF RELSEQ, TITLE 2 THE RELA/SPOT HOMOLOG FROM STREPTOCOCCUS EQUISIMILIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL RELA/SPOT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: (P)PPGPP-3'-PYROPHOSPHOHYDROLASE AND (P)PPGPP-SYNTHETASE COMPND 5 SUBDOMAINS; COMPND 6 SYNONYM: ATP:GTP 3'- PYROPHOSPHOTRANSFERASE, PPGPP SYNTHETASE I, P, COMPND 7 PPGPP SYNTHETASE, STRINGENT RESPONSE-LIKE PROTEIN; COMPND 8 EC: 3.1.7.2, 2.7.6.5; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS DYSGALACTIAE SUBSP. EQUISIMILIS; SOURCE 3 ORGANISM_TAXID: 119602; SOURCE 4 STRAIN: SUBSP. EQUISIMILIS; SOURCE 5 GENE: RELA, REL, SPOT, RSH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(LAMBDA DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21(+)-PENH385 KEYWDS HD DOMAIN, ALPHA BETA 2-LAYER SANDWICH, HELIX BUNDLE, MANGANESE, GDP, KEYWDS 2 PPG2':3'P, (P)PPGPP, PPGPP, RELA, SPOT, STRINGENT RESPONSE, KEYWDS 3 STRINGENT FACTOR, STRINGENT EFFECTOR, MAGIC SPOT, RSH, HYDROLASE, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HOGG,U.MECHOLD,H.MALKE,M.CASHEL,R.HILGENFELD REVDAT 4 14-FEB-24 1VJ7 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1VJ7 1 VERSN REVDAT 2 24-FEB-09 1VJ7 1 VERSN REVDAT 1 04-MAY-04 1VJ7 0 JRNL AUTH T.HOGG,U.MECHOLD,H.MALKE,M.CASHEL,R.HILGENFELD JRNL TITL CONFORMATIONAL ANTAGONISM BETWEEN OPPOSING ACTIVE SITES IN A JRNL TITL 2 BIFUNCTIONAL RELA/SPOT HOMOLOG MODULATES (P)PPGPP METABOLISM JRNL TITL 3 DURING THE STRINGENT RESPONSE. JRNL REF CELL(CAMBRIDGE,MASS.) V. 117 57 2004 JRNL REFN ISSN 0092-8674 JRNL PMID 15066282 JRNL DOI 10.1016/S0092-8674(04)00260-0 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 51035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3691 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5139 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.81000 REMARK 3 B22 (A**2) : 5.23000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.218 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.327 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5325 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4858 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7201 ; 2.068 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11265 ; 0.972 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 627 ; 4.190 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 992 ;19.523 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 805 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5739 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1081 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1298 ; 0.249 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4915 ; 0.218 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2 ; 0.056 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 272 ; 0.187 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 4 ; 0.163 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.144 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 50 ; 0.248 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.338 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): 1 ; 0.040 ; 0.500 REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3155 ; 1.609 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5093 ; 2.492 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2170 ; 3.447 ; 3.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2108 ; 5.133 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 109 REMARK 3 RESIDUE RANGE : A 124 A 131 REMARK 3 RESIDUE RANGE : A 997 A 997 REMARK 3 RESIDUE RANGE : A 2002 A 2241 REMARK 3 ORIGIN FOR THE GROUP (A): 107.0236 -12.6005 78.3517 REMARK 3 T TENSOR REMARK 3 T11: 0.1760 T22: 0.1457 REMARK 3 T33: 0.1529 T12: -0.1105 REMARK 3 T13: -0.0299 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 5.5625 L22: 1.4149 REMARK 3 L33: 2.9395 L12: 0.4388 REMARK 3 L13: 0.5686 L23: 0.5382 REMARK 3 S TENSOR REMARK 3 S11: 0.2572 S12: -0.5093 S13: -0.0418 REMARK 3 S21: 0.1058 S22: -0.2572 S23: -0.1077 REMARK 3 S31: 0.0543 S32: -0.2803 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 152 REMARK 3 RESIDUE RANGE : A 159 A 195 REMARK 3 RESIDUE RANGE : A 363 A 371 REMARK 3 ORIGIN FOR THE GROUP (A): 124.5004 -15.2911 74.1616 REMARK 3 T TENSOR REMARK 3 T11: 0.1706 T22: 0.0415 REMARK 3 T33: 0.2248 T12: -0.0773 REMARK 3 T13: -0.0484 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 7.2980 L22: 2.4137 REMARK 3 L33: 3.5432 L12: 1.4924 REMARK 3 L13: 1.6197 L23: 0.4236 REMARK 3 S TENSOR REMARK 3 S11: 0.2330 S12: -0.1647 S13: -0.8100 REMARK 3 S21: 0.0373 S22: -0.0991 S23: -0.2435 REMARK 3 S31: 0.2058 S32: 0.0144 S33: -0.1339 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 196 A 341 REMARK 3 RESIDUE RANGE : A 998 A 998 REMARK 3 RESIDUE RANGE : A 2242 A 2242 REMARK 3 ORIGIN FOR THE GROUP (A): 137.4666 2.1030 62.6234 REMARK 3 T TENSOR REMARK 3 T11: 0.1625 T22: 0.1018 REMARK 3 T33: 0.2268 T12: 0.0151 REMARK 3 T13: 0.0030 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 2.7769 L22: 1.0143 REMARK 3 L33: 2.8147 L12: 0.7707 REMARK 3 L13: -0.3051 L23: -0.7259 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: 0.0572 S13: 0.1804 REMARK 3 S21: 0.0829 S22: -0.0961 S23: -0.0870 REMARK 3 S31: -0.1736 S32: -0.0489 S33: -0.0673 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 112 REMARK 3 RESIDUE RANGE : B 1997 B 1997 REMARK 3 RESIDUE RANGE : B 1999 B 1999 REMARK 3 RESIDUE RANGE : B 2001 B 2243 REMARK 3 ORIGIN FOR THE GROUP (A): 172.7334 11.4879 98.5696 REMARK 3 T TENSOR REMARK 3 T11: 0.2915 T22: 0.2759 REMARK 3 T33: 0.2101 T12: -0.1597 REMARK 3 T13: 0.0129 T23: -0.0450 REMARK 3 L TENSOR REMARK 3 L11: 6.4862 L22: 1.9384 REMARK 3 L33: 6.0553 L12: 0.9768 REMARK 3 L13: -0.7771 L23: 1.0061 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: -0.3098 S13: 0.5387 REMARK 3 S21: 0.1209 S22: 0.1047 S23: 0.0700 REMARK 3 S31: -0.4183 S32: 0.7931 S33: -0.1401 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 132 B 195 REMARK 3 RESIDUE RANGE : B 364 B 370 REMARK 3 ORIGIN FOR THE GROUP (A): 158.6115 1.0684 101.9017 REMARK 3 T TENSOR REMARK 3 T11: 0.2941 T22: 0.1432 REMARK 3 T33: 0.2239 T12: -0.0721 REMARK 3 T13: 0.0473 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 8.7638 L22: 2.3913 REMARK 3 L33: 6.3961 L12: 1.1215 REMARK 3 L13: 2.0910 L23: 1.5399 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: -0.4729 S13: -0.4596 REMARK 3 S21: 0.2126 S22: 0.1536 S23: 0.0130 REMARK 3 S31: 0.3537 S32: 0.0178 S33: -0.1374 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 196 B 210 REMARK 3 RESIDUE RANGE : B 217 B 253 REMARK 3 RESIDUE RANGE : B 262 B 340 REMARK 3 RESIDUE RANGE : B 1998 B 1998 REMARK 3 ORIGIN FOR THE GROUP (A): 136.1195 12.5860 105.6819 REMARK 3 T TENSOR REMARK 3 T11: 0.4772 T22: 0.3568 REMARK 3 T33: 0.3093 T12: -0.0467 REMARK 3 T13: 0.0350 T23: 0.0774 REMARK 3 L TENSOR REMARK 3 L11: 4.0749 L22: 0.9894 REMARK 3 L33: 2.4453 L12: -1.7274 REMARK 3 L13: -2.5513 L23: 1.4950 REMARK 3 S TENSOR REMARK 3 S11: 0.1523 S12: 0.3467 S13: 0.0780 REMARK 3 S21: -0.2094 S22: 0.0538 S23: 0.1186 REMARK 3 S31: -0.2935 S32: -0.3231 S33: -0.2061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1VJ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-04. REMARK 100 THE DEPOSITION ID IS D_1000021509. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8445 REMARK 200 MONOCHROMATOR : RHODIUM COATED PRE-MIRROR BENT REMARK 200 SINGLE-CRYSTAL GERMANIUM REMARK 200 TRIANGULAR MONOCHROMATOR; REMARK 200 SEGMENTED MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53798 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 22.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD + MIR(AS) REMARK 200 SOFTWARE USED: CNS, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM CHLORIDE, MAGNESIUM REMARK 280 CHLORIDE, TRIS, MES, GDP, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K, PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.74500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.72500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.74500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.72500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS TWO COPIES OF THE N-TERMINAL REMARK 300 BIFUNCTIONAL CATALYTIC DOMAIN. THE BIOLOGICAL UNIT IS BELIEVED TO REMARK 300 BE A SINGLE COPY OF THE FULL-LENGTH PROTEIN, INCLUDING THE C- REMARK 300 TERMINAL RIBOSOME-BINDING DOMAIN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 110 REMARK 465 VAL A 111 REMARK 465 GLU A 112 REMARK 465 TYR A 113 REMARK 465 LYS A 114 REMARK 465 SER A 115 REMARK 465 HIS A 116 REMARK 465 GLU A 117 REMARK 465 GLU A 118 REMARK 465 GLN A 119 REMARK 465 LEU A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 ASN A 123 REMARK 465 LYS A 153 REMARK 465 HIS A 154 REMARK 465 LEU A 155 REMARK 465 ARG A 156 REMARK 465 LYS A 157 REMARK 465 ASP A 158 REMARK 465 HIS A 342 REMARK 465 TRP A 343 REMARK 465 ALA A 344 REMARK 465 TYR A 345 REMARK 465 LYS A 346 REMARK 465 LYS A 347 REMARK 465 GLY A 348 REMARK 465 VAL A 349 REMARK 465 ARG A 350 REMARK 465 GLY A 351 REMARK 465 LYS A 352 REMARK 465 VAL A 353 REMARK 465 ASN A 354 REMARK 465 GLN A 355 REMARK 465 ALA A 356 REMARK 465 GLU A 357 REMARK 465 GLN A 358 REMARK 465 LYS A 359 REMARK 465 VAL A 360 REMARK 465 GLY A 361 REMARK 465 MET A 362 REMARK 465 GLN A 372 REMARK 465 ASP A 373 REMARK 465 ALA A 374 REMARK 465 SER A 375 REMARK 465 ASN A 376 REMARK 465 GLY A 377 REMARK 465 ASP A 378 REMARK 465 ALA A 379 REMARK 465 VAL A 380 REMARK 465 ASP A 381 REMARK 465 PHE A 382 REMARK 465 VAL A 383 REMARK 465 ASP A 384 REMARK 465 SER A 385 REMARK 465 LEU A 386 REMARK 465 GLU A 387 REMARK 465 HIS A 388 REMARK 465 HIS A 389 REMARK 465 HIS A 390 REMARK 465 HIS A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 4 REMARK 465 TYR B 113 REMARK 465 LYS B 114 REMARK 465 SER B 115 REMARK 465 HIS B 116 REMARK 465 GLU B 117 REMARK 465 GLU B 118 REMARK 465 GLN B 119 REMARK 465 LEU B 120 REMARK 465 ALA B 121 REMARK 465 GLU B 122 REMARK 465 ASN B 123 REMARK 465 HIS B 124 REMARK 465 ARG B 125 REMARK 465 LYS B 126 REMARK 465 MET B 127 REMARK 465 LEU B 128 REMARK 465 MET B 129 REMARK 465 ALA B 130 REMARK 465 MET B 131 REMARK 465 ARG B 211 REMARK 465 ARG B 212 REMARK 465 GLU B 213 REMARK 465 ARG B 214 REMARK 465 GLU B 215 REMARK 465 ALA B 216 REMARK 465 ASP B 254 REMARK 465 LYS B 255 REMARK 465 LYS B 256 REMARK 465 LYS B 257 REMARK 465 ARG B 258 REMARK 465 PHE B 259 REMARK 465 ASP B 260 REMARK 465 GLN B 261 REMARK 465 ALA B 341 REMARK 465 HIS B 342 REMARK 465 TRP B 343 REMARK 465 ALA B 344 REMARK 465 TYR B 345 REMARK 465 LYS B 346 REMARK 465 LYS B 347 REMARK 465 GLY B 348 REMARK 465 VAL B 349 REMARK 465 ARG B 350 REMARK 465 GLY B 351 REMARK 465 LYS B 352 REMARK 465 VAL B 353 REMARK 465 ASN B 354 REMARK 465 GLN B 355 REMARK 465 ALA B 356 REMARK 465 GLU B 357 REMARK 465 GLN B 358 REMARK 465 LYS B 359 REMARK 465 VAL B 360 REMARK 465 GLY B 361 REMARK 465 MET B 362 REMARK 465 ASN B 363 REMARK 465 LEU B 371 REMARK 465 GLN B 372 REMARK 465 ASP B 373 REMARK 465 ALA B 374 REMARK 465 SER B 375 REMARK 465 ASN B 376 REMARK 465 GLY B 377 REMARK 465 ASP B 378 REMARK 465 ALA B 379 REMARK 465 VAL B 380 REMARK 465 ASP B 381 REMARK 465 PHE B 382 REMARK 465 VAL B 383 REMARK 465 ASP B 384 REMARK 465 SER B 385 REMARK 465 LEU B 386 REMARK 465 GLU B 387 REMARK 465 HIS B 388 REMARK 465 HIS B 389 REMARK 465 HIS B 390 REMARK 465 HIS B 391 REMARK 465 HIS B 392 REMARK 465 HIS B 393 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP B 364 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 364 CZ3 CH2 REMARK 470 ILE B 365 CG1 CG2 CD1 REMARK 470 LYS B 366 CG CD CE NZ REMARK 470 GLU B 367 CG CD OE1 OE2 REMARK 470 LEU B 368 CG CD1 CD2 REMARK 470 VAL B 369 CG1 CG2 REMARK 470 GLU B 370 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 253 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 363 O HOH A 2106 1.88 REMARK 500 OE1 GLU A 231 O HOH A 2183 2.05 REMARK 500 O HOH B 2112 O HOH B 2181 2.11 REMARK 500 OE1 GLN A 275 O HOH A 2236 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 226 OE1 GLU A 370 1565 2.19 REMARK 500 OD2 ASP A 93 OH TYR B 41 3445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 33 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 67 N - CA - CB ANGL. DEV. = -15.0 DEGREES REMARK 500 ASP A 67 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 67 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 93 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 144 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 214 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 214 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 254 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 264 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 327 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 327 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP B 78 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 100 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP B 158 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 269 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 269 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP B 298 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 44 -169.96 -75.68 REMARK 500 ASP A 67 146.46 -34.23 REMARK 500 ARG A 125 -6.54 97.80 REMARK 500 LYS A 126 20.69 -164.76 REMARK 500 GLN A 160 -34.44 -37.26 REMARK 500 ILE A 170 -64.37 -124.95 REMARK 500 ASN A 196 71.14 -150.98 REMARK 500 LYS A 256 -117.44 38.09 REMARK 500 GLN A 261 0.21 -68.19 REMARK 500 ILE A 262 -69.81 -103.73 REMARK 500 TRP A 364 -36.60 -35.35 REMARK 500 MET B 20 -153.03 -105.24 REMARK 500 ASN B 21 -149.37 -134.53 REMARK 500 TYR B 41 -3.82 71.17 REMARK 500 ASP B 67 -159.53 -21.10 REMARK 500 TYR B 316 -79.14 -70.91 REMARK 500 PRO B 318 -83.05 -78.73 REMARK 500 ILE B 365 -27.56 113.25 REMARK 500 LYS B 366 24.11 -52.32 REMARK 500 LEU B 368 59.13 -108.99 REMARK 500 VAL B 369 130.41 -175.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 997 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 53 NE2 REMARK 620 2 HIS A 77 NE2 100.4 REMARK 620 3 ASP A 144 OD1 88.5 100.7 REMARK 620 4 HOH A2002 O 165.1 94.1 92.3 REMARK 620 5 HOH A2100 O 101.8 102.0 152.8 71.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1997 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 53 NE2 REMARK 620 2 HIS B 77 NE2 93.4 REMARK 620 3 ASP B 78 OD2 88.6 78.5 REMARK 620 4 ASP B 144 OD1 100.7 95.7 169.4 REMARK 620 5 HOH B2009 O 158.7 106.2 87.1 85.9 REMARK 620 6 HOH B2178 O 85.6 169.8 91.2 94.5 73.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 997 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1997 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 998 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 1998 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GPX B 1999 DBREF 1VJ7 A 1 385 UNP Q54089 RELA_STREQ 1 385 DBREF 1VJ7 B 1 385 UNP Q54089 RELA_STREQ 1 385 SEQADV 1VJ7 LEU A 386 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 GLU A 387 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 388 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 389 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 390 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 391 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 392 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS A 393 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 LEU B 386 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 GLU B 387 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 388 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 389 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 390 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 391 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 392 UNP Q54089 EXPRESSION TAG SEQADV 1VJ7 HIS B 393 UNP Q54089 EXPRESSION TAG SEQRES 1 A 393 MET ALA LYS GLU ILE ASN LEU THR GLY GLU GLU VAL VAL SEQRES 2 A 393 ALA LEU ALA ALA LYS TYR MET ASN GLU THR ASP ALA ALA SEQRES 3 A 393 PHE VAL LYS LYS ALA LEU ASP TYR ALA THR ALA ALA HIS SEQRES 4 A 393 PHE TYR GLN VAL ARG LYS SER GLY GLU PRO TYR ILE VAL SEQRES 5 A 393 HIS PRO ILE GLN VAL ALA GLY ILE LEU ALA ASP LEU HIS SEQRES 6 A 393 LEU ASP ALA VAL THR VAL ALA CYS GLY PHE LEU HIS ASP SEQRES 7 A 393 VAL VAL GLU ASP THR ASP ILE THR LEU ASP ASN ILE GLU SEQRES 8 A 393 PHE ASP PHE GLY LYS ASP VAL ARG ASP ILE VAL ASP GLY SEQRES 9 A 393 VAL THR LYS LEU GLY LYS VAL GLU TYR LYS SER HIS GLU SEQRES 10 A 393 GLU GLN LEU ALA GLU ASN HIS ARG LYS MET LEU MET ALA SEQRES 11 A 393 MET SER LYS ASP ILE ARG VAL ILE LEU VAL LYS LEU ALA SEQRES 12 A 393 ASP ARG LEU HIS ASN MET ARG THR LEU LYS HIS LEU ARG SEQRES 13 A 393 LYS ASP LYS GLN GLU ARG ILE SER ARG GLU THR MET GLU SEQRES 14 A 393 ILE TYR ALA PRO LEU ALA HIS ARG LEU GLY ILE SER ARG SEQRES 15 A 393 ILE LYS TRP GLU LEU GLU ASP LEU ALA PHE ARG TYR LEU SEQRES 16 A 393 ASN GLU THR GLU PHE TYR LYS ILE SER HIS MET MET ASN SEQRES 17 A 393 GLU LYS ARG ARG GLU ARG GLU ALA LEU VAL ASP ASP ILE SEQRES 18 A 393 VAL THR LYS ILE LYS SER TYR THR THR GLU GLN GLY LEU SEQRES 19 A 393 PHE GLY ASP VAL TYR GLY ARG PRO LYS HIS ILE TYR SER SEQRES 20 A 393 ILE TYR ARG LYS MET ARG ASP LYS LYS LYS ARG PHE ASP SEQRES 21 A 393 GLN ILE PHE ASP LEU ILE ALA ILE ARG CYS VAL MET GLU SEQRES 22 A 393 THR GLN SER ASP VAL TYR ALA MET VAL GLY TYR ILE HIS SEQRES 23 A 393 GLU LEU TRP ARG PRO MET PRO GLY ARG PHE LYS ASP TYR SEQRES 24 A 393 ILE ALA ALA PRO LYS ALA ASN GLY TYR GLN SER ILE HIS SEQRES 25 A 393 THR THR VAL TYR GLY PRO LYS GLY PRO ILE GLU ILE GLN SEQRES 26 A 393 ILE ARG THR LYS GLU MET HIS GLN VAL ALA GLU TYR GLY SEQRES 27 A 393 VAL ALA ALA HIS TRP ALA TYR LYS LYS GLY VAL ARG GLY SEQRES 28 A 393 LYS VAL ASN GLN ALA GLU GLN LYS VAL GLY MET ASN TRP SEQRES 29 A 393 ILE LYS GLU LEU VAL GLU LEU GLN ASP ALA SER ASN GLY SEQRES 30 A 393 ASP ALA VAL ASP PHE VAL ASP SER LEU GLU HIS HIS HIS SEQRES 31 A 393 HIS HIS HIS SEQRES 1 B 393 MET ALA LYS GLU ILE ASN LEU THR GLY GLU GLU VAL VAL SEQRES 2 B 393 ALA LEU ALA ALA LYS TYR MET ASN GLU THR ASP ALA ALA SEQRES 3 B 393 PHE VAL LYS LYS ALA LEU ASP TYR ALA THR ALA ALA HIS SEQRES 4 B 393 PHE TYR GLN VAL ARG LYS SER GLY GLU PRO TYR ILE VAL SEQRES 5 B 393 HIS PRO ILE GLN VAL ALA GLY ILE LEU ALA ASP LEU HIS SEQRES 6 B 393 LEU ASP ALA VAL THR VAL ALA CYS GLY PHE LEU HIS ASP SEQRES 7 B 393 VAL VAL GLU ASP THR ASP ILE THR LEU ASP ASN ILE GLU SEQRES 8 B 393 PHE ASP PHE GLY LYS ASP VAL ARG ASP ILE VAL ASP GLY SEQRES 9 B 393 VAL THR LYS LEU GLY LYS VAL GLU TYR LYS SER HIS GLU SEQRES 10 B 393 GLU GLN LEU ALA GLU ASN HIS ARG LYS MET LEU MET ALA SEQRES 11 B 393 MET SER LYS ASP ILE ARG VAL ILE LEU VAL LYS LEU ALA SEQRES 12 B 393 ASP ARG LEU HIS ASN MET ARG THR LEU LYS HIS LEU ARG SEQRES 13 B 393 LYS ASP LYS GLN GLU ARG ILE SER ARG GLU THR MET GLU SEQRES 14 B 393 ILE TYR ALA PRO LEU ALA HIS ARG LEU GLY ILE SER ARG SEQRES 15 B 393 ILE LYS TRP GLU LEU GLU ASP LEU ALA PHE ARG TYR LEU SEQRES 16 B 393 ASN GLU THR GLU PHE TYR LYS ILE SER HIS MET MET ASN SEQRES 17 B 393 GLU LYS ARG ARG GLU ARG GLU ALA LEU VAL ASP ASP ILE SEQRES 18 B 393 VAL THR LYS ILE LYS SER TYR THR THR GLU GLN GLY LEU SEQRES 19 B 393 PHE GLY ASP VAL TYR GLY ARG PRO LYS HIS ILE TYR SER SEQRES 20 B 393 ILE TYR ARG LYS MET ARG ASP LYS LYS LYS ARG PHE ASP SEQRES 21 B 393 GLN ILE PHE ASP LEU ILE ALA ILE ARG CYS VAL MET GLU SEQRES 22 B 393 THR GLN SER ASP VAL TYR ALA MET VAL GLY TYR ILE HIS SEQRES 23 B 393 GLU LEU TRP ARG PRO MET PRO GLY ARG PHE LYS ASP TYR SEQRES 24 B 393 ILE ALA ALA PRO LYS ALA ASN GLY TYR GLN SER ILE HIS SEQRES 25 B 393 THR THR VAL TYR GLY PRO LYS GLY PRO ILE GLU ILE GLN SEQRES 26 B 393 ILE ARG THR LYS GLU MET HIS GLN VAL ALA GLU TYR GLY SEQRES 27 B 393 VAL ALA ALA HIS TRP ALA TYR LYS LYS GLY VAL ARG GLY SEQRES 28 B 393 LYS VAL ASN GLN ALA GLU GLN LYS VAL GLY MET ASN TRP SEQRES 29 B 393 ILE LYS GLU LEU VAL GLU LEU GLN ASP ALA SER ASN GLY SEQRES 30 B 393 ASP ALA VAL ASP PHE VAL ASP SER LEU GLU HIS HIS HIS SEQRES 31 B 393 HIS HIS HIS HET MN A 997 1 HET GDP A 998 28 HET MN B1997 1 HET GDP B1998 28 HET GPX B1999 31 HETNAM MN MANGANESE (II) ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GPX GUANOSINE 5'-DIPHOSPHATE 2':3'-CYCLIC MONOPHOSPHATE FORMUL 3 MN 2(MN 2+) FORMUL 4 GDP 2(C10 H15 N5 O11 P2) FORMUL 7 GPX C10 H14 N5 O13 P3 FORMUL 8 HOH *196(H2 O) HELIX 1 1 THR A 8 MET A 20 1 13 HELIX 2 2 ASN A 21 HIS A 39 1 19 HELIX 3 3 ILE A 51 LEU A 64 1 14 HELIX 4 4 ASP A 67 HIS A 77 1 11 HELIX 5 5 ASP A 78 THR A 83 1 6 HELIX 6 6 THR A 86 GLY A 95 1 10 HELIX 7 7 GLY A 95 GLY A 109 1 15 HELIX 8 8 ASP A 134 THR A 151 1 18 HELIX 9 9 LYS A 159 ILE A 170 1 12 HELIX 10 10 ILE A 170 LEU A 178 1 9 HELIX 11 11 ILE A 180 ASN A 196 1 17 HELIX 12 12 ASN A 196 LYS A 210 1 15 HELIX 13 13 LYS A 210 GLU A 231 1 22 HELIX 14 14 HIS A 244 LYS A 256 1 13 HELIX 15 15 LYS A 257 PHE A 259 5 3 HELIX 16 16 ILE A 262 LEU A 265 5 4 HELIX 17 17 THR A 274 TRP A 289 1 16 HELIX 18 18 LYS A 329 GLY A 338 1 10 HELIX 19 19 ASN A 363 LEU A 371 1 9 HELIX 20 20 THR B 8 MET B 20 1 13 HELIX 21 21 ASN B 21 HIS B 39 1 19 HELIX 22 22 ILE B 51 LEU B 64 1 14 HELIX 23 23 ALA B 68 HIS B 77 1 10 HELIX 24 24 ASP B 78 THR B 83 1 6 HELIX 25 25 THR B 86 GLY B 95 1 10 HELIX 26 26 GLY B 95 GLY B 109 1 15 HELIX 27 27 ASP B 134 THR B 151 1 18 HELIX 28 28 LEU B 152 LEU B 155 5 4 HELIX 29 29 ARG B 156 ILE B 170 1 15 HELIX 30 30 ILE B 170 LEU B 178 1 9 HELIX 31 31 ILE B 180 ASN B 196 1 17 HELIX 32 32 ASN B 196 ASN B 208 1 13 HELIX 33 33 LEU B 217 GLN B 232 1 16 HELIX 34 34 HIS B 244 LYS B 251 1 8 HELIX 35 35 THR B 274 TRP B 289 1 16 HELIX 36 36 LYS B 329 GLY B 338 1 10 SHEET 1 A 5 ASP A 237 GLY A 240 0 SHEET 2 A 5 ALA A 267 MET A 272 -1 O ARG A 269 N TYR A 239 SHEET 3 A 5 PRO A 321 THR A 328 1 O ARG A 327 N MET A 272 SHEET 4 A 5 ILE A 311 TYR A 316 -1 N THR A 313 O ILE A 324 SHEET 5 A 5 LYS A 297 ASP A 298 -1 N LYS A 297 O HIS A 312 SHEET 1 B 5 ASP B 237 GLY B 240 0 SHEET 2 B 5 ILE B 266 MET B 272 -1 O VAL B 271 N ASP B 237 SHEET 3 B 5 ILE B 322 THR B 328 1 O ARG B 327 N MET B 272 SHEET 4 B 5 ILE B 311 VAL B 315 -1 N ILE B 311 O ILE B 326 SHEET 5 B 5 LYS B 297 ASP B 298 -1 N LYS B 297 O HIS B 312 LINK NE2 HIS A 53 MN MN A 997 1555 1555 2.15 LINK NE2 HIS A 77 MN MN A 997 1555 1555 2.01 LINK OD1 ASP A 144 MN MN A 997 1555 1555 1.97 LINK MN MN A 997 O HOH A2002 1555 1555 1.98 LINK MN MN A 997 O HOH A2100 1555 1555 2.32 LINK NE2 HIS B 53 MN MN B1997 1555 1555 1.94 LINK NE2 HIS B 77 MN MN B1997 1555 1555 2.07 LINK OD2 ASP B 78 MN MN B1997 1555 1555 2.25 LINK OD1 ASP B 144 MN MN B1997 1555 1555 2.09 LINK MN MN B1997 O HOH B2009 1555 1555 2.06 LINK MN MN B1997 O HOH B2178 1555 1555 2.06 SITE 1 AC1 6 HIS A 53 HIS A 77 ASP A 144 HOH A2002 SITE 2 AC1 6 HOH A2089 HOH A2100 SITE 1 AC2 6 HIS B 53 HIS B 77 ASP B 78 ASP B 144 SITE 2 AC2 6 HOH B2009 HOH B2178 SITE 1 AC3 15 HIS A 176 SER A 181 TRP A 185 ARG A 241 SITE 2 AC3 15 LYS A 297 TYR A 299 LYS A 304 ASN A 306 SITE 3 AC3 15 TYR A 308 HIS A 312 GLN A 325 ALA A 335 SITE 4 AC3 15 HOH A2022 HOH A2036 HOH A2153 SITE 1 AC4 13 HIS B 176 SER B 181 TRP B 185 ARG B 241 SITE 2 AC4 13 LYS B 297 TYR B 299 LYS B 304 ASN B 306 SITE 3 AC4 13 TYR B 308 HIS B 312 GLU B 323 GLN B 325 SITE 4 AC4 13 ALA B 335 SITE 1 AC5 11 ARG B 44 LYS B 45 SER B 46 ASN B 148 SITE 2 AC5 11 THR B 151 LEU B 155 LYS B 159 HOH B2092 SITE 3 AC5 11 HOH B2104 HOH B2178 HOH B2231 CRYST1 173.490 45.450 126.470 90.00 109.83 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005764 0.000000 0.002079 0.00000 SCALE2 0.000000 0.022002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008405 0.00000