HEADER UNKNOWN FUNCTION 10-MAR-04 1VJL TITLE CRYSTAL STRUCTURE OF A DUF151 FAMILY PROTEIN (TM0160) FROM THERMOTOGA TITLE 2 MARITIMA AT 1.90 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TM0160; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: PREDICTED PROTEIN RELATED TO WOUND INDUCIVE PROTEINS COMPND 6 IN PLANTS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM0160; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS,JOINT CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (JCSG) REVDAT 9 09-OCT-24 1VJL 1 REMARK REVDAT 8 25-JAN-23 1VJL 1 REMARK SEQADV LINK REVDAT 7 18-JUL-18 1VJL 1 REMARK REVDAT 6 13-JUL-11 1VJL 1 VERSN REVDAT 5 23-MAR-11 1VJL 1 HEADER TITLE KEYWDS REVDAT 4 24-FEB-09 1VJL 1 VERSN REVDAT 3 01-MAR-05 1VJL 1 REVDAT 2 10-AUG-04 1VJL 1 TITLE KEYWDS COMPND JRNL REVDAT 1 16-MAR-04 1VJL 0 SPRSDE 16-MAR-04 1VJL 1O5Y JRNL AUTH G.SPRAGGON,D.PANTAZATOS,H.E.KLOCK,I.A.WILSON,V.L.WOODS, JRNL AUTH 2 S.A.LESLEY JRNL TITL ON THE USE OF DXMS TO PRODUCE MORE CRYSTALLIZABLE PROTEINS: JRNL TITL 2 STRUCTURES OF THE T. MARITIMA PROTEINS TM0160 AND TM1171. JRNL REF PROTEIN SCI. V. 13 3187 2004 JRNL REFN ISSN 0961-8368 JRNL PMID 15557262 JRNL DOI 10.1110/PS.04939904 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 23110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1214 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1652 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2175 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 42.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.30000 REMARK 3 B22 (A**2) : 1.36000 REMARK 3 B33 (A**2) : 2.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2210 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2143 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3008 ; 1.665 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4955 ; 0.813 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 6.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;41.589 ;24.138 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 392 ;16.655 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;23.207 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 376 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2380 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 402 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 452 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2195 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1497 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1 ; 0.033 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.115 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 58 ; 0.219 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.103 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1494 ; 1.079 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2274 ; 1.470 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 865 ; 2.259 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 734 ; 3.298 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 140 REMARK 3 RESIDUE RANGE : B 0 B 130 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 RESIDUE RANGE : A 401 A 406 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8756 0.3860 18.3276 REMARK 3 T TENSOR REMARK 3 T11: -0.1363 T22: -0.2057 REMARK 3 T33: -0.2622 T12: -0.0309 REMARK 3 T13: -0.0073 T23: 0.0475 REMARK 3 L TENSOR REMARK 3 L11: 6.3987 L22: 2.4554 REMARK 3 L33: 1.0827 L12: -2.2082 REMARK 3 L13: -0.4467 L23: 0.1660 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: -0.3151 S13: -0.2633 REMARK 3 S21: 0.0341 S22: 0.1506 S23: 0.1209 REMARK 3 S31: 0.0267 S32: 0.0198 S33: -0.1283 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): -23.1110 14.1500 5.3214 REMARK 3 T TENSOR REMARK 3 T11: 0.0821 T22: 0.1503 REMARK 3 T33: 0.0426 T12: -0.0387 REMARK 3 T13: -0.0155 T23: 0.0885 REMARK 3 L TENSOR REMARK 3 L11: 11.9797 L22: 59.8467 REMARK 3 L33: 61.8614 L12: 8.5374 REMARK 3 L13: 12.1361 L23: 43.4893 REMARK 3 S TENSOR REMARK 3 S11: -1.0389 S12: 0.2795 S13: 0.1675 REMARK 3 S21: -0.7178 S22: 0.5912 S23: 1.9923 REMARK 3 S31: -0.0686 S32: -0.2389 S33: 0.4477 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 131 B 141 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1897 -19.2291 9.0967 REMARK 3 T TENSOR REMARK 3 T11: 0.0771 T22: -0.1385 REMARK 3 T33: 0.1240 T12: 0.1042 REMARK 3 T13: -0.0355 T23: -0.0992 REMARK 3 L TENSOR REMARK 3 L11: 13.4063 L22: 17.7163 REMARK 3 L33: 12.7534 L12: -5.3893 REMARK 3 L13: 6.4302 L23: 5.2467 REMARK 3 S TENSOR REMARK 3 S11: 0.5259 S12: 0.7230 S13: -0.9520 REMARK 3 S21: -1.4335 S22: 0.0189 S23: -0.0448 REMARK 3 S31: 0.0904 S32: 0.4076 S33: -0.5448 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. CHLORINE WAS MODELED SINCE IT OCCURS IN THE REMARK 3 CRYSTALLIZATION BUFFER AND RESULTED IN NO RESIDUAL DIFFERENCE REMARK 3 DENSITY AT THE SITES. 3. CONTINUOUS, UNINTERPRETABLE ELECTRON REMARK 3 DENSITY NEAR RESIDUES (5,121,126) IN BOTH SUBUNITS IS LISTED AS REMARK 3 UNL, AN UNKNOWN LIGAND CONTAINING OXYGENS. REMARK 4 REMARK 4 1VJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000001922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-03; 15-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; ALS REMARK 200 BEAMLINE : 5.0.3; 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 0.9793 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL, CYLINDRICALLY REMARK 200 BENT, SI(220); DOUBLE-CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC; ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24182 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.180 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.31 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % ISOPROPANOL, 20 % PEG 4000; 0.1 M REMARK 280 HEPES PH7.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE REMARK 280 293K. 10 % ISOPROPANOL, 20 % PEG 4000; 0.1 M HEPES PH7.5, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.53050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 TYR A 96 REMARK 465 THR A 97 REMARK 465 ASP A 98 REMARK 465 GLU A 99 REMARK 465 GLU A 100 REMARK 465 ASP A 101 REMARK 465 GLU A 102 REMARK 465 GLU A 103 REMARK 465 SER A 151 REMARK 465 ARG A 152 REMARK 465 MET B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 THR B 97 REMARK 465 ASP B 98 REMARK 465 GLU B 99 REMARK 465 GLU B 100 REMARK 465 ASP B 101 REMARK 465 GLU B 142 REMARK 465 VAL B 143 REMARK 465 ASN B 144 REMARK 465 GLU B 145 REMARK 465 ARG B 146 REMARK 465 ASP B 147 REMARK 465 LEU B 148 REMARK 465 ILE B 149 REMARK 465 ASN B 150 REMARK 465 SER B 151 REMARK 465 ARG B 152 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 LYS B 136 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 75 CB VAL A 75 CG1 -0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 95 OG1 - CB - CG2 ANGL. DEV. = -14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 13 16.13 -68.00 REMARK 500 VAL A 14 -54.65 -130.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 CONTINUOUS, UNINTERPRETABLE ELECTRON DENSITY REMARK 600 NEAR RESIDUES (5,121,126) IN BOTH SUBUNITS IS REMARK 600 LISTED AS UNL, AN UNKNOWN LIGAND CONTAINING OXYGENS. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282040 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 BOTH CHAINS WERE TRUNCATIONS OF THE ORIGINAL SEQUENCE REMARK 999 TRUNCATED AT RESIDUE 145, THEN HAVING THE ADDITIONAL REMARK 999 RDLINSR, A C-TERMINAL EPITOPE TAG. DBREF 1VJL A 1 145 UNP Q9WY07 Q9WY07_THEMA 1 145 DBREF 1VJL B 1 145 UNP Q9WY07 Q9WY07_THEMA 1 145 SEQADV 1VJL MET A -11 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL GLY A -10 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL SER A -9 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL ASP A -8 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL LYS A -7 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL ILE A -6 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A -5 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A -4 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A -3 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A -2 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A -1 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS A 0 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL MSE A 1 UNP Q9WY07 MET 1 MODIFIED RESIDUE SEQADV 1VJL MSE A 47 UNP Q9WY07 MET 47 MODIFIED RESIDUE SEQADV 1VJL MSE A 50 UNP Q9WY07 MET 50 MODIFIED RESIDUE SEQADV 1VJL ARG A 146 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ASP A 147 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL LEU A 148 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ILE A 149 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ASN A 150 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL SER A 151 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ARG A 152 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL MET B -11 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL GLY B -10 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL SER B -9 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL ASP B -8 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL LYS B -7 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL ILE B -6 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B -5 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B -4 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B -3 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B -2 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B -1 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL HIS B 0 UNP Q9WY07 EXPRESSION TAG SEQADV 1VJL MSE B 1 UNP Q9WY07 MET 1 MODIFIED RESIDUE SEQADV 1VJL MSE B 47 UNP Q9WY07 MET 47 MODIFIED RESIDUE SEQADV 1VJL MSE B 50 UNP Q9WY07 MET 50 MODIFIED RESIDUE SEQADV 1VJL ARG B 146 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ASP B 147 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL LEU B 148 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ILE B 149 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ASN B 150 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL SER B 151 UNP Q9WY07 SEE REMARK 999 SEQADV 1VJL ARG B 152 UNP Q9WY07 SEE REMARK 999 SEQRES 1 A 164 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 164 ARG LYS ALA TRP VAL LYS THR LEU ALA LEU ASP ARG VAL SEQRES 3 A 164 SER ASN THR PRO VAL VAL ILE LEU GLY ILE GLU GLY THR SEQRES 4 A 164 ASN ARG VAL LEU PRO ILE TRP ILE GLY ALA CYS GLU GLY SEQRES 5 A 164 HIS ALA LEU ALA LEU ALA MSE GLU LYS MSE GLU PHE PRO SEQRES 6 A 164 ARG PRO LEU THR HIS ASP LEU LEU LEU SER VAL LEU GLU SEQRES 7 A 164 SER LEU GLU ALA ARG VAL ASP LYS VAL ILE ILE HIS SER SEQRES 8 A 164 LEU LYS ASP ASN THR PHE TYR ALA THR LEU VAL ILE ARG SEQRES 9 A 164 ASP LEU THR TYR THR ASP GLU GLU ASP GLU GLU ALA ALA SEQRES 10 A 164 LEU ILE ASP ILE ASP SER ARG PRO SER ASP ALA ILE ILE SEQRES 11 A 164 LEU ALA VAL LYS THR GLY ALA PRO ILE PHE VAL SER ASP SEQRES 12 A 164 ASN LEU VAL GLU LYS HIS SER ILE GLU LEU GLU VAL ASN SEQRES 13 A 164 GLU ARG ASP LEU ILE ASN SER ARG SEQRES 1 B 164 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 164 ARG LYS ALA TRP VAL LYS THR LEU ALA LEU ASP ARG VAL SEQRES 3 B 164 SER ASN THR PRO VAL VAL ILE LEU GLY ILE GLU GLY THR SEQRES 4 B 164 ASN ARG VAL LEU PRO ILE TRP ILE GLY ALA CYS GLU GLY SEQRES 5 B 164 HIS ALA LEU ALA LEU ALA MSE GLU LYS MSE GLU PHE PRO SEQRES 6 B 164 ARG PRO LEU THR HIS ASP LEU LEU LEU SER VAL LEU GLU SEQRES 7 B 164 SER LEU GLU ALA ARG VAL ASP LYS VAL ILE ILE HIS SER SEQRES 8 B 164 LEU LYS ASP ASN THR PHE TYR ALA THR LEU VAL ILE ARG SEQRES 9 B 164 ASP LEU THR TYR THR ASP GLU GLU ASP GLU GLU ALA ALA SEQRES 10 B 164 LEU ILE ASP ILE ASP SER ARG PRO SER ASP ALA ILE ILE SEQRES 11 B 164 LEU ALA VAL LYS THR GLY ALA PRO ILE PHE VAL SER ASP SEQRES 12 B 164 ASN LEU VAL GLU LYS HIS SER ILE GLU LEU GLU VAL ASN SEQRES 13 B 164 GLU ARG ASP LEU ILE ASN SER ARG MODRES 1VJL MSE A 1 MET SELENOMETHIONINE MODRES 1VJL MSE A 47 MET SELENOMETHIONINE MODRES 1VJL MSE A 50 MET SELENOMETHIONINE MODRES 1VJL MSE B 1 MET SELENOMETHIONINE MODRES 1VJL MSE B 47 MET SELENOMETHIONINE MODRES 1VJL MSE B 50 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 47 8 HET MSE A 50 8 HET MSE B 1 8 HET MSE B 47 8 HET MSE B 50 8 HET CL A 301 1 HET UNL A 401 3 HET CL B 302 1 HET UNL B 402 3 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM UNL UNKNOWN LIGAND FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 7 HOH *164(H2 O) HELIX 1 1 GLY A 36 LYS A 49 1 14 HELIX 2 2 LEU A 56 LEU A 68 1 13 HELIX 3 3 ARG A 112 GLY A 124 1 13 HELIX 4 4 ASP A 131 SER A 138 1 8 HELIX 5 5 GLU A 142 ASN A 150 1 9 HELIX 6 6 GLY B 36 LYS B 49 1 14 HELIX 7 7 LEU B 56 LEU B 68 1 13 HELIX 8 8 ARG B 112 GLY B 124 1 13 HELIX 9 9 ASP B 131 SER B 138 1 8 SHEET 1 A 8 LEU A 106 SER A 111 0 SHEET 2 A 8 THR A 84 ASP A 93 -1 N LEU A 89 O ILE A 109 SHEET 3 A 8 ALA A 70 LYS A 81 -1 N ARG A 71 O ARG A 92 SHEET 4 A 8 ILE A 127 SER A 130 1 O PHE A 128 N ILE A 77 SHEET 5 A 8 MSE A 1 LEU A 11 -1 N ARG A 2 O VAL A 129 SHEET 6 A 8 PRO A 18 ILE A 24 -1 O VAL A 19 N ALA A 10 SHEET 7 A 8 ARG A 29 TRP A 34 -1 O ILE A 33 N VAL A 20 SHEET 8 A 8 ILE A 139 GLU A 140 -1 O ILE A 139 N VAL A 30 SHEET 1 B 8 LEU B 106 SER B 111 0 SHEET 2 B 8 THR B 84 ASP B 93 -1 N ILE B 91 O ILE B 107 SHEET 3 B 8 ALA B 70 LYS B 81 -1 N ARG B 71 O ARG B 92 SHEET 4 B 8 ILE B 127 SER B 130 1 O PHE B 128 N ILE B 77 SHEET 5 B 8 MSE B 1 ASP B 12 -1 N ARG B 2 O VAL B 129 SHEET 6 B 8 THR B 17 ILE B 24 -1 O THR B 17 N ASP B 12 SHEET 7 B 8 ARG B 29 TRP B 34 -1 O ILE B 33 N VAL B 20 SHEET 8 B 8 ILE B 139 GLU B 140 -1 O ILE B 139 N VAL B 30 SSBOND 1 CYS A 38 CYS B 38 1555 1555 2.06 LINK C HIS A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N ARG A 2 1555 1555 1.34 LINK C ALA A 46 N MSE A 47 1555 1555 1.33 LINK C MSE A 47 N GLU A 48 1555 1555 1.33 LINK C LYS A 49 N MSE A 50 1555 1555 1.32 LINK C MSE A 50 N GLU A 51 1555 1555 1.33 LINK C HIS B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ARG B 2 1555 1555 1.33 LINK C ALA B 46 N MSE B 47 1555 1555 1.31 LINK C MSE B 47 N GLU B 48 1555 1555 1.33 LINK C LYS B 49 N MSE B 50 1555 1555 1.31 LINK C MSE B 50 N GLU B 51 1555 1555 1.33 SITE 1 AC1 2 ARG A 112 SER A 114 SITE 1 AC2 3 ARG B 112 PRO B 113 SER B 114 SITE 1 AC3 3 TRP A 5 VAL A 6 ALA A 125 SITE 1 AC4 3 VAL B 6 ALA B 125 HOH B 405 CRYST1 43.509 51.061 72.974 90.00 97.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022984 0.000000 0.002981 0.00000 SCALE2 0.000000 0.019584 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013818 0.00000