HEADER    TRANSFERASE                             14-JUN-04   1VKR              
TITLE     STRUCTURE OF IIB DOMAIN OF THE MANNITOL-SPECIFIC PERMEASE ENZYME II   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MANNITOL-SPECIFIC PTS SYSTEM ENZYME IIABC COMPONENTS;      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: IIB DOMAIN;                                                
COMPND   5 SYNONYM: IIBMTL PHOSPHOTRANSFERASE ENZYME II, B COMPONENT, EIIB-MTL; 
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   3 ORGANISM_TAXID: 83334;                                               
SOURCE   4 STRAIN: O157:H7;                                                     
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    PHOSPHOTRANSFERASE, TRANSFERASE, KINASE, SUGAR TRANSPORT              
EXPDTA    SOLUTION NMR                                                          
AUTHOR    G.M.CLORE,P.M.LEGLER,M.CAI                                            
REVDAT   4   27-DEC-23 1VKR    1       REMARK SEQADV                            
REVDAT   3   13-JUL-11 1VKR    1       VERSN                                    
REVDAT   2   24-FEB-09 1VKR    1       VERSN                                    
REVDAT   1   21-SEP-04 1VKR    0                                                
JRNL        AUTH   P.M.LEGLER,M.CAI,A.PETERKOFSKY,G.M.CLORE                     
JRNL        TITL   THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE CYTOPLASMIC B    
JRNL        TITL 2 DOMAIN OF THE MANNITOL TRANSPORTER II-MANNITOL OF THE        
JRNL        TITL 3 ESCHERICHIA COLI PHOSPHOTRANSFERASE SYSTEM.                  
JRNL        REF    J.BIOL.CHEM.                  V. 279 39115 2004              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   15258141                                                     
JRNL        DOI    10.1074/JBC.M406764200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR NIH (HTTP://NMR.CIT.NIH.GOV/XPLOR_NIH)        
REMARK   3   AUTHORS     : SCHWIETERS, KUSZEWSKI, TJANDRA, CLORE                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  THE TARGET FUNCTION COMPRISES TERMS FOR THE NOE-DERIVED             
REMARK   3  INTERPROTON DISTANCE RESTRAINTS, TORSION ANGLE RESTRAINTS, 3JHN-    
REMARK   3  HALPHA COUPLING CONSTANT RESTRAINTS, 13CALPHA/BETA CHEMICAL SHIFT   
REMARK   3  RESTRAINTS, AND RESIDUAL DIPOLAR COUPLING RESTRAINTS (N-H, N-C'     
REMARK   3  AND HN-C'); A QUARTIC VAN DER WAALS REPULSION TERM, TORSION ANGLE   
REMARK   3  AND HYDROGEN BONDING DATABASE POTENTIALS OF MEAN FORCE, AND A       
REMARK   3  RADIUS OF GYRATION RESTRAINTS.                                      
REMARK   3                                                                      
REMARK   3  IN THIS ENTRY THE LAST COLUMN REPRESENTS THE AVERAGE RMS            
REMARK   3  DIFFERENCE BETWEEN THE INDIVIDUAL SIMULATED  BEST-FITTED            
REMARK   3  TO RESIDUES 375-471. ONLY RESIDUES 375-471 ARE SHOWN                
REMARK   3  SINCE RESIDUES 365-374 AND 472-489 AT THE N- AND C-TERMINI          
REMARK   3  RESPECTIVELY, ARE DISORDERED IN SOLUTION.                           
REMARK   3                                                                      
REMARK   3  EXPERIMENTAL RESTRAINTS:                                            
REMARK   3     1444 INTERPROTON DISTANCE RESTRAINTS:                            
REMARK   3           (90 INTRARESIDUE; 419 SEQUENTIAL, 347                      
REMARK   3           MEDIUM-RANGE, AND 517 LONG-RANGE INTERRESIDUE;             
REMARK   3           50 SEQUENTIAL/MEDIUM-RANGE AMBIGUOUS;                      
REMARK   3           21 LONG-RANGE AMBIGUOUS                                    
REMARK   3     110 DISTANCE RESTRAINTS FOR 55 BACKBONE H-BONDS                  
REMARK   3     214 TORSION ANGLE RESTRAINTS (90 PHI, 94 PSI, 68 CHI)            
REMARK   3     189 CALPHA/CBETA CHEMICAL SHIFT RESTRAINTS                       
REMARK   3      70 3JHN-HA COUPLING CONSTANT RESTRAINTS                         
REMARK   3     200 RESIDUAL DIPOLAR COUPLING RESTRAINTS                         
REMARK   3           (74 N-H, 62 N-C', 64 HN-C')                                
REMARK   3     DIPOLAR COUPLING R-FACTORS:                                      
REMARK   3        N-H 2.8%                                                      
REMARK   3        N-C' 14.9%                                                    
REMARK   3        HN-C' 13.5%                                                   
REMARK   4                                                                      
REMARK   4 1VKR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000001960.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 308.00                             
REMARK 210  PH                             : 7.1                                
REMARK 210  IONIC STRENGTH                 : 40 MM SODIUM PHOSPHATE             
REMARK 210  PRESSURE                       : NULL                               
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 1) TRIPLE RESONANCE FOR            
REMARK 210                                   ASSIGNMENT OF PROTEIN; (2)         
REMARK 210                                   QUANTITATIVE J CORRELATION FOR     
REMARK 210                                   COUPLING CONSTANTS; (3) 3D, 4D     
REMARK 210                                   HETERONUCLEAR SEPARATED NOE        
REMARK 210                                   EXPTS; (4) IPAP AND COUPLED HSQC   
REMARK 210                                   EXPERIMENTS FOR DIPOLAR            
REMARK 210                                   COUPLINGS. DIPOLAR COUPLINGS       
REMARK 210                                   WERE MEASURED IN PEG/HEXANOL       
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 600 MHZ; 750 MHZ; 800     
REMARK 210                                   MHZ                                
REMARK 210  SPECTROMETER MODEL             : DMX500; DMX600; DRX600; DMC750;    
REMARK 210                                   DRX800                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 80                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 1                                  
REMARK 210 CONFORMERS, SELECTION CRITERIA  : REGULARIZED MEAN STRUCTURE         
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL                
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY A   365                                                      
REMARK 465     SER A   366                                                      
REMARK 465     ALA A   367                                                      
REMARK 465     GLY A   368                                                      
REMARK 465     ASP A   369                                                      
REMARK 465     VAL A   370                                                      
REMARK 465     THR A   371                                                      
REMARK 465     ASN A   372                                                      
REMARK 465     ASP A   373                                                      
REMARK 465     LEU A   374                                                      
REMARK 465     THR A   472                                                      
REMARK 465     GLU A   473                                                      
REMARK 465     ASN A   474                                                      
REMARK 465     GLU A   475                                                      
REMARK 465     VAL A   476                                                      
REMARK 465     LYS A   477                                                      
REMARK 465     VAL A   478                                                      
REMARK 465     LYS A   479                                                      
REMARK 465     ASP A   480                                                      
REMARK 465     SER A   481                                                      
REMARK 465     LEU A   482                                                      
REMARK 465     LYS A   483                                                      
REMARK 465     ASP A   484                                                      
REMARK 465     SER A   485                                                      
REMARK 465     PHE A   486                                                      
REMARK 465     ASP A   487                                                      
REMARK 465     ASP A   488                                                      
REMARK 465     SER A   489                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HD1  HIS A   430     H    ASP A   432              1.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A 378       -3.04   -143.23                                   
REMARK 500    MET A 388      -67.60   -149.09                                   
REMARK 500    ASP A 454       79.20    -62.04                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  1VKR A  367   489  UNP    P00550   PTM3C_ECOLI    367    489             
SEQADV 1VKR GLY A  365  UNP  P00550              CLONING ARTIFACT               
SEQADV 1VKR SER A  366  UNP  P00550              CLONING ARTIFACT               
SEQRES   1 A  125  GLY SER ALA GLY ASP VAL THR ASN ASP LEU SER HIS VAL          
SEQRES   2 A  125  ARG LYS ILE ILE VAL ALA CYS ASP ALA GLY MET GLY SER          
SEQRES   3 A  125  SER ALA MET GLY ALA GLY VAL LEU ARG LYS LYS ILE GLN          
SEQRES   4 A  125  ASP ALA GLY LEU SER GLN ILE SER VAL THR ASN SER ALA          
SEQRES   5 A  125  ILE ASN ASN LEU PRO PRO ASP VAL ASP LEU VAL ILE THR          
SEQRES   6 A  125  HIS ARG ASP LEU THR GLU ARG ALA MET ARG GLN VAL PRO          
SEQRES   7 A  125  GLN ALA GLN HIS ILE SER LEU THR ASN PHE LEU ASP SER          
SEQRES   8 A  125  GLY LEU TYR THR SER LEU THR GLU ARG LEU VAL ALA ALA          
SEQRES   9 A  125  GLN ARG HIS THR GLU ASN GLU VAL LYS VAL LYS ASP SER          
SEQRES  10 A  125  LEU LYS ASP SER PHE ASP ASP SER                              
HELIX    1   1 MET A  388  ALA A  405  1                                  18    
HELIX    2   2 ARG A  431  VAL A  441  1                                  11    
HELIX    3   3 ASP A  454  HIS A  471  1                                  18    
SHEET    1   A 4 SER A 411  ASN A 414  0                                        
SHEET    2   A 4 LYS A 379  VAL A 382  1  N  ILE A 380   O  SER A 411           
SHEET    3   A 4 LEU A 426  HIS A 430  1  O  ILE A 428   N  ILE A 381           
SHEET    4   A 4 GLN A 445  LEU A 449  1  O  GLN A 445   N  VAL A 427           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000