HEADER PROTEIN TRANSPORT 15-SEP-04 1VMA TITLE CRYSTAL STRUCTURE OF CELL DIVISION PROTEIN FTSY (TM0570) FROM TITLE 2 THERMOTOGA MARITIMA AT 1.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION PROTEIN FTSY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM0570; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM0570, CELL DIVISION PROTEIN FTSY, STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, JOINT CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 23-AUG-23 1VMA 1 REMARK SEQADV LINK REVDAT 5 13-JUL-11 1VMA 1 VERSN REVDAT 4 24-FEB-09 1VMA 1 VERSN REVDAT 3 28-MAR-06 1VMA 1 JRNL REVDAT 2 18-JAN-05 1VMA 1 AUTHOR KEYWDS REMARK REVDAT 1 28-SEP-04 1VMA 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF CELL DIVISION PROTEIN FTSY (TM0570) JRNL TITL 2 FROM THERMOTOGA MARITIMA AT 1.60 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC (5.2.0001) REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 79919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4219 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5765 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 327 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 394 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.75000 REMARK 3 B22 (A**2) : -0.44000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.645 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4529 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4396 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6133 ; 1.660 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10205 ; 0.845 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 586 ; 5.904 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 173 ;30.222 ;25.491 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 831 ;14.474 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;14.058 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 755 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4964 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 810 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1148 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4679 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2710 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 283 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.085 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 50 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.183 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3009 ; 2.371 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1208 ; 0.723 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4720 ; 3.202 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1673 ; 5.106 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1413 ; 7.219 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7831 -0.8535 1.3226 REMARK 3 T TENSOR REMARK 3 T11: -0.0449 T22: -0.1049 REMARK 3 T33: -0.1777 T12: 0.0282 REMARK 3 T13: -0.0006 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.4537 L22: 1.7393 REMARK 3 L33: 1.5782 L12: 0.2817 REMARK 3 L13: -0.1920 L23: -0.0271 REMARK 3 S TENSOR REMARK 3 S11: 0.0196 S12: 0.1676 S13: -0.0471 REMARK 3 S21: -0.3305 S22: -0.0606 S23: -0.0281 REMARK 3 S31: 0.0404 S32: 0.0971 S33: 0.0409 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 282 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4407 1.3693 26.7954 REMARK 3 T TENSOR REMARK 3 T11: -0.0846 T22: -0.0567 REMARK 3 T33: -0.0646 T12: 0.0009 REMARK 3 T13: 0.0748 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.7539 L22: 2.1553 REMARK 3 L33: 2.0946 L12: -0.1021 REMARK 3 L13: -0.4383 L23: -0.2179 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.0970 S13: -0.0512 REMARK 3 S21: 0.3735 S22: -0.0402 S23: 0.4638 REMARK 3 S31: -0.1511 S32: -0.2265 S33: 0.0031 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 283 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2483 -6.6338 3.1385 REMARK 3 T TENSOR REMARK 3 T11: -0.0566 T22: -0.1173 REMARK 3 T33: -0.1271 T12: 0.0119 REMARK 3 T13: -0.0350 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.8609 L22: 3.4407 REMARK 3 L33: 8.3237 L12: 2.0194 REMARK 3 L13: -1.8316 L23: 0.8666 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: 0.1066 S13: -0.1713 REMARK 3 S21: -0.2949 S22: -0.1296 S23: 0.0671 REMARK 3 S31: 0.2148 S32: 0.0757 S33: 0.1606 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8105 -2.0668 41.7072 REMARK 3 T TENSOR REMARK 3 T11: 0.1631 T22: -0.0591 REMARK 3 T33: -0.0612 T12: -0.0387 REMARK 3 T13: -0.1340 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.4326 L22: 1.0813 REMARK 3 L33: 1.7578 L12: -0.5131 REMARK 3 L13: -0.3252 L23: -0.1618 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.2845 S13: -0.0165 REMARK 3 S21: 0.3843 S22: -0.0044 S23: -0.0916 REMARK 3 S31: 0.2071 S32: -0.0194 S33: -0.0126 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 83 B 282 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8553 0.5503 16.1629 REMARK 3 T TENSOR REMARK 3 T11: -0.1290 T22: -0.0691 REMARK 3 T33: 0.1073 T12: -0.0058 REMARK 3 T13: -0.0417 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.8160 L22: 1.4307 REMARK 3 L33: 2.2181 L12: -0.0806 REMARK 3 L13: -0.3187 L23: 0.4966 REMARK 3 S TENSOR REMARK 3 S11: 0.0508 S12: 0.0397 S13: 0.0271 REMARK 3 S21: 0.0535 S22: 0.0773 S23: -0.5734 REMARK 3 S31: -0.0327 S32: 0.2750 S33: -0.1280 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 283 B 294 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0913 -8.2797 39.2181 REMARK 3 T TENSOR REMARK 3 T11: 0.2101 T22: -0.0737 REMARK 3 T33: -0.0080 T12: 0.0144 REMARK 3 T13: -0.1834 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 1.2430 L22: 3.3465 REMARK 3 L33: 5.9593 L12: -1.3140 REMARK 3 L13: -1.6751 L23: 2.8516 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: -0.2538 S13: -0.1083 REMARK 3 S21: 0.1565 S22: -0.0664 S23: -0.0111 REMARK 3 S31: 0.4574 S32: 0.2412 S33: 0.0338 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1VMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000002006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000034 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA (CCP4 4.2), CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84144 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 24.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09700 REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42700 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1FTS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0% PEG-6000, 0.1M CITRATE, PH 5.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.05100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 N REMARK 470 LYS A 24 CE NZ REMARK 470 LYS A 84 CE NZ REMARK 470 GLU A 144 CD OE1 OE2 REMARK 470 ARG A 173 CD NE CZ NH1 NH2 REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 186 CG CD1 CD2 REMARK 470 HIS A 187 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 190 CD CE NZ REMARK 470 ASN A 191 CG OD1 ND2 REMARK 470 GLU A 194 CD OE1 OE2 REMARK 470 LYS A 198 CD CE NZ REMARK 470 LYS A 206 CD CE NZ REMARK 470 GLU A 274 CG CD OE1 OE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 LEU B 3 CD1 REMARK 470 LYS B 29 CE NZ REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 LYS B 84 CD CE NZ REMARK 470 LYS B 111 CD CE NZ REMARK 470 LYS B 114 CE NZ REMARK 470 LYS B 121 CD CE NZ REMARK 470 GLN B 138 CD OE1 NE2 REMARK 470 ARG B 173 CD NE CZ NH1 NH2 REMARK 470 LYS B 175 CE NZ REMARK 470 LEU B 186 CG CD1 CD2 REMARK 470 HIS B 187 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 274 CG CD OE1 OE2 REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 GLU B 277 CB CG CD OE1 OE2 REMARK 470 GLU B 294 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 158 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP B 32 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 18 -55.37 -134.00 REMARK 500 ASN A 80 59.76 -96.12 REMARK 500 THR A 188 83.62 -150.69 REMARK 500 PHE B 18 -51.47 -126.15 REMARK 500 THR B 188 74.86 -152.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 295 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 316 O REMARK 620 2 HOH A 349 O 101.3 REMARK 620 3 HOH A 381 O 131.1 76.5 REMARK 620 4 HOH A 418 O 66.8 168.0 109.5 REMARK 620 5 HOH A 435 O 137.8 81.3 90.8 108.5 REMARK 620 6 HOH A 484 O 67.2 90.3 158.8 86.7 70.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 295 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 295 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282443 RELATED DB: TARGETDB DBREF 1VMA A 1 294 UNP Q9WZ40 Q9WZ40_THEMA 1 294 DBREF 1VMA B 1 294 UNP Q9WZ40 Q9WZ40_THEMA 1 294 SEQADV 1VMA MET A -11 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA GLY A -10 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA SER A -9 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA ASP A -8 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA LYS A -7 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA ILE A -6 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A -5 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A -4 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A -3 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A -2 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A -1 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS A 0 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA MET B -11 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA GLY B -10 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA SER B -9 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA ASP B -8 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA LYS B -7 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA ILE B -6 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B -5 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B -4 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B -3 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B -2 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B -1 UNP Q9WZ40 EXPRESSION TAG SEQADV 1VMA HIS B 0 UNP Q9WZ40 EXPRESSION TAG SEQRES 1 A 306 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 306 GLY LEU PHE ASP PHE LEU LYS LYS GLY LEU GLN LYS THR SEQRES 3 A 306 LYS GLU THR PHE PHE GLY ARG VAL VAL LYS LEU LEU LYS SEQRES 4 A 306 GLY LYS LYS LEU ASP ASP GLU THR ARG GLU GLU LEU GLU SEQRES 5 A 306 GLU LEU LEU ILE GLN ALA ASP VAL GLY VAL GLU THR THR SEQRES 6 A 306 GLU TYR ILE LEU GLU ARG LEU GLU GLU LYS ASP GLY ASP SEQRES 7 A 306 ALA LEU GLU SER LEU LYS GLU ILE ILE LEU GLU ILE LEU SEQRES 8 A 306 ASN PHE ASP THR LYS LEU ASN VAL PRO PRO GLU PRO PRO SEQRES 9 A 306 PHE VAL ILE MET VAL VAL GLY VAL ASN GLY THR GLY LYS SEQRES 10 A 306 THR THR SER CYS GLY LYS LEU ALA LYS MET PHE VAL ASP SEQRES 11 A 306 GLU GLY LYS SER VAL VAL LEU ALA ALA ALA ASP THR PHE SEQRES 12 A 306 ARG ALA ALA ALA ILE GLU GLN LEU LYS ILE TRP GLY GLU SEQRES 13 A 306 ARG VAL GLY ALA THR VAL ILE SER HIS SER GLU GLY ALA SEQRES 14 A 306 ASP PRO ALA ALA VAL ALA PHE ASP ALA VAL ALA HIS ALA SEQRES 15 A 306 LEU ALA ARG ASN LYS ASP VAL VAL ILE ILE ASP THR ALA SEQRES 16 A 306 GLY ARG LEU HIS THR LYS LYS ASN LEU MET GLU GLU LEU SEQRES 17 A 306 ARG LYS VAL HIS ARG VAL VAL LYS LYS LYS ILE PRO ASP SEQRES 18 A 306 ALA PRO HIS GLU THR LEU LEU VAL ILE ASP ALA THR THR SEQRES 19 A 306 GLY GLN ASN GLY LEU VAL GLN ALA LYS ILE PHE LYS GLU SEQRES 20 A 306 ALA VAL ASN VAL THR GLY ILE ILE LEU THR LYS LEU ASP SEQRES 21 A 306 GLY THR ALA LYS GLY GLY ILE THR LEU ALA ILE ALA ARG SEQRES 22 A 306 GLU LEU GLY ILE PRO ILE LYS PHE ILE GLY VAL GLY GLU SEQRES 23 A 306 LYS ALA GLU ASP LEU ARG PRO PHE ASP PRO GLU ALA PHE SEQRES 24 A 306 VAL GLU VAL LEU LEU SER GLU SEQRES 1 B 306 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 B 306 GLY LEU PHE ASP PHE LEU LYS LYS GLY LEU GLN LYS THR SEQRES 3 B 306 LYS GLU THR PHE PHE GLY ARG VAL VAL LYS LEU LEU LYS SEQRES 4 B 306 GLY LYS LYS LEU ASP ASP GLU THR ARG GLU GLU LEU GLU SEQRES 5 B 306 GLU LEU LEU ILE GLN ALA ASP VAL GLY VAL GLU THR THR SEQRES 6 B 306 GLU TYR ILE LEU GLU ARG LEU GLU GLU LYS ASP GLY ASP SEQRES 7 B 306 ALA LEU GLU SER LEU LYS GLU ILE ILE LEU GLU ILE LEU SEQRES 8 B 306 ASN PHE ASP THR LYS LEU ASN VAL PRO PRO GLU PRO PRO SEQRES 9 B 306 PHE VAL ILE MET VAL VAL GLY VAL ASN GLY THR GLY LYS SEQRES 10 B 306 THR THR SER CYS GLY LYS LEU ALA LYS MET PHE VAL ASP SEQRES 11 B 306 GLU GLY LYS SER VAL VAL LEU ALA ALA ALA ASP THR PHE SEQRES 12 B 306 ARG ALA ALA ALA ILE GLU GLN LEU LYS ILE TRP GLY GLU SEQRES 13 B 306 ARG VAL GLY ALA THR VAL ILE SER HIS SER GLU GLY ALA SEQRES 14 B 306 ASP PRO ALA ALA VAL ALA PHE ASP ALA VAL ALA HIS ALA SEQRES 15 B 306 LEU ALA ARG ASN LYS ASP VAL VAL ILE ILE ASP THR ALA SEQRES 16 B 306 GLY ARG LEU HIS THR LYS LYS ASN LEU MET GLU GLU LEU SEQRES 17 B 306 ARG LYS VAL HIS ARG VAL VAL LYS LYS LYS ILE PRO ASP SEQRES 18 B 306 ALA PRO HIS GLU THR LEU LEU VAL ILE ASP ALA THR THR SEQRES 19 B 306 GLY GLN ASN GLY LEU VAL GLN ALA LYS ILE PHE LYS GLU SEQRES 20 B 306 ALA VAL ASN VAL THR GLY ILE ILE LEU THR LYS LEU ASP SEQRES 21 B 306 GLY THR ALA LYS GLY GLY ILE THR LEU ALA ILE ALA ARG SEQRES 22 B 306 GLU LEU GLY ILE PRO ILE LYS PHE ILE GLY VAL GLY GLU SEQRES 23 B 306 LYS ALA GLU ASP LEU ARG PRO PHE ASP PRO GLU ALA PHE SEQRES 24 B 306 VAL GLU VAL LEU LEU SER GLU HET MG A 295 1 HET CIT B 295 13 HETNAM MG MAGNESIUM ION HETNAM CIT CITRIC ACID FORMUL 3 MG MG 2+ FORMUL 4 CIT C6 H8 O7 FORMUL 5 HOH *394(H2 O) HELIX 1 1 GLY A 2 PHE A 18 1 17 HELIX 2 2 PHE A 18 LYS A 27 1 10 HELIX 3 3 ASP A 32 ALA A 46 1 15 HELIX 4 4 GLY A 49 GLU A 61 1 13 HELIX 5 5 ASP A 66 LEU A 79 1 14 HELIX 6 6 GLY A 104 GLU A 119 1 16 HELIX 7 7 ARG A 132 GLY A 147 1 16 HELIX 8 8 ASP A 158 ARG A 173 1 16 HELIX 9 9 THR A 188 VAL A 203 1 16 HELIX 10 10 LYS A 204 LYS A 206 5 3 HELIX 11 11 THR A 222 VAL A 237 1 16 HELIX 12 12 LYS A 246 THR A 250 5 5 HELIX 13 13 GLY A 254 GLY A 264 1 11 HELIX 14 14 LYS A 275 GLU A 277 5 3 HELIX 15 15 ASP A 283 LEU A 292 1 10 HELIX 16 16 GLY B 2 PHE B 18 1 17 HELIX 17 17 PHE B 18 LYS B 27 1 10 HELIX 18 18 ASP B 32 ALA B 46 1 15 HELIX 19 19 GLY B 49 GLU B 62 1 14 HELIX 20 20 ASP B 66 ASN B 80 1 15 HELIX 21 21 GLY B 104 GLU B 119 1 16 HELIX 22 22 ARG B 132 GLY B 147 1 16 HELIX 23 23 ASP B 158 ARG B 173 1 16 HELIX 24 24 THR B 188 VAL B 203 1 16 HELIX 25 25 LYS B 204 LYS B 206 5 3 HELIX 26 26 THR B 222 VAL B 237 1 16 HELIX 27 27 LYS B 246 THR B 250 5 5 HELIX 28 28 GLY B 254 GLY B 264 1 11 HELIX 29 29 ASP B 283 LEU B 292 1 10 SHEET 1 A 8 THR A 149 ILE A 151 0 SHEET 2 A 8 VAL A 123 ALA A 128 1 N LEU A 125 O THR A 149 SHEET 3 A 8 VAL A 177 THR A 182 1 O ILE A 179 N ALA A 126 SHEET 4 A 8 PHE A 93 VAL A 98 1 N ILE A 95 O VAL A 178 SHEET 5 A 8 GLU A 213 ASP A 219 1 O VAL A 217 N VAL A 98 SHEET 6 A 8 GLY A 241 THR A 245 1 O ILE A 243 N ILE A 218 SHEET 7 A 8 ILE A 267 GLY A 271 1 O GLY A 271 N LEU A 244 SHEET 8 A 8 LEU A 279 PRO A 281 -1 O ARG A 280 N ILE A 270 SHEET 1 B 8 THR B 149 ILE B 151 0 SHEET 2 B 8 VAL B 123 ALA B 128 1 N LEU B 125 O THR B 149 SHEET 3 B 8 VAL B 177 THR B 182 1 O ILE B 179 N VAL B 124 SHEET 4 B 8 PHE B 93 GLY B 99 1 N ILE B 95 O VAL B 178 SHEET 5 B 8 GLU B 213 ASP B 219 1 O LEU B 215 N VAL B 98 SHEET 6 B 8 GLY B 241 THR B 245 1 O ILE B 243 N LEU B 216 SHEET 7 B 8 ILE B 267 GLY B 271 1 O GLY B 271 N LEU B 244 SHEET 8 B 8 LEU B 279 PRO B 281 -1 O ARG B 280 N ILE B 270 LINK MG MG A 295 O HOH A 316 1555 1555 3.05 LINK MG MG A 295 O HOH A 349 1555 1555 2.32 LINK MG MG A 295 O HOH A 381 1555 1555 2.35 LINK MG MG A 295 O HOH A 418 1555 1555 1.91 LINK MG MG A 295 O HOH A 435 1555 1555 2.64 LINK MG MG A 295 O HOH A 484 1555 1555 2.10 CISPEP 1 PRO A 91 PRO A 92 0 -0.22 CISPEP 2 ALA A 210 PRO A 211 0 -15.00 CISPEP 3 PRO B 91 PRO B 92 0 1.67 CISPEP 4 ALA B 210 PRO B 211 0 -11.33 SITE 1 AC1 9 GLY A 102 GLY A 104 LYS A 105 HOH A 316 SITE 2 AC1 9 HOH A 349 HOH A 381 HOH A 418 HOH A 435 SITE 3 AC1 9 HOH A 484 SITE 1 AC2 10 VAL B 100 ASN B 101 GLY B 102 THR B 103 SITE 2 AC2 10 GLY B 104 LYS B 105 THR B 106 THR B 107 SITE 3 AC2 10 ARG B 132 HOH B 325 CRYST1 78.446 48.102 90.792 90.00 107.94 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012748 0.000000 0.004127 0.00000 SCALE2 0.000000 0.020789 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011577 0.00000