data_1VWR # _entry.id 1VWR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VWR pdb_00001vwr 10.2210/pdb1vwr/pdb WWPDB D_1000177143 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-03-18 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 2 0 2024-06-05 6 'Structure model' 2 1 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' Advisory 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' atom_site 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' software 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature 11 6 'Structure model' pdbx_struct_special_symmetry 12 6 'Structure model' pdbx_validate_symm_contact # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_atom_site.occupancy' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_database_status.process_site' 5 5 'Structure model' '_software.name' 6 5 'Structure model' '_struct_conn.pdbx_dist_value' 7 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 20 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 21 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 22 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 23 6 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VWR _pdbx_database_status.recvd_initial_deposition_date 1997-03-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Katz, B.A.' 1 'Cass, R.T.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. ; J.Biol.Chem. 272 13220 13228 1997 JBCHA3 US 0021-9258 0071 ? 9148939 10.1074/jbc.272.20.13220 1 ;Structure-Based Design Tools: Structural and Thermodynamic Comparison with Biotin of a Small Molecule that Binds Streptavidin with Micromolar Affinity ; J.Am.Chem.Soc. 118 7914 ? 1996 JACSAT US 0002-7863 0004 ? ? ? 2 'Preparation of a Protein-Dimerizing Ligand by Topochemistry and Structure-Based Design' J.Am.Chem.Soc. 118 2535 ? 1996 JACSAT US 0002-7863 0004 ? ? ? 3 'Topochemical Catalysis Achieved by Structure-Based Ligand Design' J.Biol.Chem. 270 31210 ? 1995 JBCHA3 US 0021-9258 0071 ? ? ? 4 'Topochemistry for Preparing Ligands that Dimerize Receptors' Chem.Biol. 2 591 ? 1995 CBOLE2 UK 1074-5521 2050 ? ? ? 5 ;Binding to Protein Targets of Peptidic Leads Discovered by Phage Display: Crystal Structures of Streptavidin-Bound Linear and Cyclic Peptide Ligands Containing the Hpq Sequence ; Biochemistry 34 15421 ? 1995 BICHAW US 0006-2960 0033 ? ? ? 6 'Structure-Based Design of High Affinity Streptavidin Binding Cyclic Peptide Ligands Containing Thioether Cross-Links' J.Am.Chem.Soc. 117 8541 ? 1995 JACSAT US 0002-7863 0004 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Katz, B.A.' 1 ? primary 'Cass, R.T.' 2 ? 1 'Katz, B.A.' 3 ? 1 'Liu, B.' 4 ? 1 'Cass, R.T.' 5 ? 2 'Katz, B.A.' 6 ? 3 'Katz, B.A.' 7 ? 3 'Cass, R.T.' 8 ? 3 'Liu, B.' 9 ? 3 'Arze, R.' 10 ? 3 'Collins, N.' 11 ? 4 'Katz, B.A.' 12 ? 4 'Stroud, R.M.' 13 ? 4 'Collins, N.' 14 ? 4 'Liu, B.' 15 ? 4 'Arze, R.' 16 ? 5 'Katz, B.A.' 17 ? 6 'Katz, B.A.' 18 ? 6 'Johnson, C.R.' 19 ? 6 'Cass, R.T.' 20 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat STREPTAVIDIN 12965.025 1 ? ? ? ? 2 polymer nat 'PEPTIDE LIGAND CONTAINING HPQ' 863.017 1 ? ? ? ? 3 non-polymer syn 'PENTANOIC ACID' 102.132 1 ? ? ? ? 4 water nat water 18.015 70 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP ; ;AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP ; B ? 2 'polypeptide(L)' no yes 'HPQGPPCK(NH2)' HPQGPPCKX P ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PENTANOIC ACID' LEA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLU n 1 3 ALA n 1 4 GLY n 1 5 ILE n 1 6 THR n 1 7 GLY n 1 8 THR n 1 9 TRP n 1 10 TYR n 1 11 ASN n 1 12 GLN n 1 13 LEU n 1 14 GLY n 1 15 SER n 1 16 THR n 1 17 PHE n 1 18 ILE n 1 19 VAL n 1 20 THR n 1 21 ALA n 1 22 GLY n 1 23 ALA n 1 24 ASP n 1 25 GLY n 1 26 ALA n 1 27 LEU n 1 28 THR n 1 29 GLY n 1 30 THR n 1 31 TYR n 1 32 GLU n 1 33 SER n 1 34 ALA n 1 35 VAL n 1 36 GLY n 1 37 ASN n 1 38 ALA n 1 39 GLU n 1 40 SER n 1 41 ARG n 1 42 TYR n 1 43 VAL n 1 44 LEU n 1 45 THR n 1 46 GLY n 1 47 ARG n 1 48 TYR n 1 49 ASP n 1 50 SER n 1 51 ALA n 1 52 PRO n 1 53 ALA n 1 54 THR n 1 55 ASP n 1 56 GLY n 1 57 SER n 1 58 GLY n 1 59 THR n 1 60 ALA n 1 61 LEU n 1 62 GLY n 1 63 TRP n 1 64 THR n 1 65 VAL n 1 66 ALA n 1 67 TRP n 1 68 LYS n 1 69 ASN n 1 70 ASN n 1 71 TYR n 1 72 ARG n 1 73 ASN n 1 74 ALA n 1 75 HIS n 1 76 SER n 1 77 ALA n 1 78 THR n 1 79 THR n 1 80 TRP n 1 81 SER n 1 82 GLY n 1 83 GLN n 1 84 TYR n 1 85 VAL n 1 86 GLY n 1 87 GLY n 1 88 ALA n 1 89 GLU n 1 90 ALA n 1 91 ARG n 1 92 ILE n 1 93 ASN n 1 94 THR n 1 95 GLN n 1 96 TRP n 1 97 LEU n 1 98 LEU n 1 99 THR n 1 100 SER n 1 101 GLY n 1 102 THR n 1 103 THR n 1 104 GLU n 1 105 ALA n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 LYS n 1 110 SER n 1 111 THR n 1 112 LEU n 1 113 VAL n 1 114 GLY n 1 115 HIS n 1 116 ASP n 1 117 THR n 1 118 PHE n 1 119 THR n 1 120 LYS n 1 121 VAL n 1 122 LYS n 1 123 PRO n 2 1 HIS n 2 2 PRO n 2 3 GLN n 2 4 GLY n 2 5 PRO n 2 6 PRO n 2 7 CYS n 2 8 LYS n 2 9 NH2 n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Streptomyces avidinii' 1895 Streptomyces ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? 'island jararaca' 'Bothrops insularis' 8723 Bothrops ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEA non-polymer . 'PENTANOIC ACID' 'VALERIC ACID' 'C5 H10 O2' 102.132 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 13 13 ALA ALA B . n A 1 2 GLU 2 14 14 GLU GLU B . n A 1 3 ALA 3 15 15 ALA ALA B . n A 1 4 GLY 4 16 16 GLY GLY B . n A 1 5 ILE 5 17 17 ILE ILE B . n A 1 6 THR 6 18 18 THR THR B . n A 1 7 GLY 7 19 19 GLY GLY B . n A 1 8 THR 8 20 20 THR THR B . n A 1 9 TRP 9 21 21 TRP TRP B . n A 1 10 TYR 10 22 22 TYR TYR B . n A 1 11 ASN 11 23 23 ASN ASN B . n A 1 12 GLN 12 24 24 GLN GLN B . n A 1 13 LEU 13 25 25 LEU LEU B . n A 1 14 GLY 14 26 26 GLY GLY B . n A 1 15 SER 15 27 27 SER SER B . n A 1 16 THR 16 28 28 THR THR B . n A 1 17 PHE 17 29 29 PHE PHE B . n A 1 18 ILE 18 30 30 ILE ILE B . n A 1 19 VAL 19 31 31 VAL VAL B . n A 1 20 THR 20 32 32 THR THR B . n A 1 21 ALA 21 33 33 ALA ALA B . n A 1 22 GLY 22 34 34 GLY GLY B . n A 1 23 ALA 23 35 35 ALA ALA B . n A 1 24 ASP 24 36 36 ASP ASP B . n A 1 25 GLY 25 37 37 GLY GLY B . n A 1 26 ALA 26 38 38 ALA ALA B . n A 1 27 LEU 27 39 39 LEU LEU B . n A 1 28 THR 28 40 40 THR THR B . n A 1 29 GLY 29 41 41 GLY GLY B . n A 1 30 THR 30 42 42 THR THR B . n A 1 31 TYR 31 43 43 TYR TYR B . n A 1 32 GLU 32 44 44 GLU GLU B . n A 1 33 SER 33 45 45 SER SER B . n A 1 34 ALA 34 46 46 ALA ALA B . n A 1 35 VAL 35 47 47 VAL VAL B . n A 1 36 GLY 36 48 48 GLY GLY B . n A 1 37 ASN 37 49 49 ASN ASN B . n A 1 38 ALA 38 50 50 ALA ALA B . n A 1 39 GLU 39 51 51 GLU GLU B . n A 1 40 SER 40 52 52 SER SER B . n A 1 41 ARG 41 53 53 ARG ARG B . n A 1 42 TYR 42 54 54 TYR TYR B . n A 1 43 VAL 43 55 55 VAL VAL B . n A 1 44 LEU 44 56 56 LEU LEU B . n A 1 45 THR 45 57 57 THR THR B . n A 1 46 GLY 46 58 58 GLY GLY B . n A 1 47 ARG 47 59 59 ARG ARG B . n A 1 48 TYR 48 60 60 TYR TYR B . n A 1 49 ASP 49 61 61 ASP ASP B . n A 1 50 SER 50 62 62 SER SER B . n A 1 51 ALA 51 63 63 ALA ALA B . n A 1 52 PRO 52 64 64 PRO PRO B . n A 1 53 ALA 53 65 65 ALA ALA B . n A 1 54 THR 54 66 66 THR THR B . n A 1 55 ASP 55 67 67 ASP ASP B . n A 1 56 GLY 56 68 68 GLY GLY B . n A 1 57 SER 57 69 69 SER SER B . n A 1 58 GLY 58 70 70 GLY GLY B . n A 1 59 THR 59 71 71 THR THR B . n A 1 60 ALA 60 72 72 ALA ALA B . n A 1 61 LEU 61 73 73 LEU LEU B . n A 1 62 GLY 62 74 74 GLY GLY B . n A 1 63 TRP 63 75 75 TRP TRP B . n A 1 64 THR 64 76 76 THR THR B . n A 1 65 VAL 65 77 77 VAL VAL B . n A 1 66 ALA 66 78 78 ALA ALA B . n A 1 67 TRP 67 79 79 TRP TRP B . n A 1 68 LYS 68 80 80 LYS LYS B . n A 1 69 ASN 69 81 81 ASN ASN B . n A 1 70 ASN 70 82 82 ASN ASN B . n A 1 71 TYR 71 83 83 TYR TYR B . n A 1 72 ARG 72 84 84 ARG ARG B . n A 1 73 ASN 73 85 85 ASN ASN B . n A 1 74 ALA 74 86 86 ALA ALA B . n A 1 75 HIS 75 87 87 HIS HIS B . n A 1 76 SER 76 88 88 SER SER B . n A 1 77 ALA 77 89 89 ALA ALA B . n A 1 78 THR 78 90 90 THR THR B . n A 1 79 THR 79 91 91 THR THR B . n A 1 80 TRP 80 92 92 TRP TRP B . n A 1 81 SER 81 93 93 SER SER B . n A 1 82 GLY 82 94 94 GLY GLY B . n A 1 83 GLN 83 95 95 GLN GLN B . n A 1 84 TYR 84 96 96 TYR TYR B . n A 1 85 VAL 85 97 97 VAL VAL B . n A 1 86 GLY 86 98 98 GLY GLY B . n A 1 87 GLY 87 99 99 GLY GLY B . n A 1 88 ALA 88 100 100 ALA ALA B . n A 1 89 GLU 89 101 101 GLU GLU B . n A 1 90 ALA 90 102 102 ALA ALA B . n A 1 91 ARG 91 103 103 ARG ARG B . n A 1 92 ILE 92 104 104 ILE ILE B . n A 1 93 ASN 93 105 105 ASN ASN B . n A 1 94 THR 94 106 106 THR THR B . n A 1 95 GLN 95 107 107 GLN GLN B . n A 1 96 TRP 96 108 108 TRP TRP B . n A 1 97 LEU 97 109 109 LEU LEU B . n A 1 98 LEU 98 110 110 LEU LEU B . n A 1 99 THR 99 111 111 THR THR B . n A 1 100 SER 100 112 112 SER SER B . n A 1 101 GLY 101 113 113 GLY GLY B . n A 1 102 THR 102 114 114 THR THR B . n A 1 103 THR 103 115 115 THR THR B . n A 1 104 GLU 104 116 116 GLU GLU B . n A 1 105 ALA 105 117 117 ALA ALA B . n A 1 106 ASN 106 118 118 ASN ASN B . n A 1 107 ALA 107 119 119 ALA ALA B . n A 1 108 TRP 108 120 120 TRP TRP B . n A 1 109 LYS 109 121 121 LYS LYS B . n A 1 110 SER 110 122 122 SER SER B . n A 1 111 THR 111 123 123 THR THR B . n A 1 112 LEU 112 124 124 LEU LEU B . n A 1 113 VAL 113 125 125 VAL VAL B . n A 1 114 GLY 114 126 126 GLY GLY B . n A 1 115 HIS 115 127 127 HIS HIS B . n A 1 116 ASP 116 128 128 ASP ASP B . n A 1 117 THR 117 129 129 THR THR B . n A 1 118 PHE 118 130 130 PHE PHE B . n A 1 119 THR 119 131 131 THR THR B . n A 1 120 LYS 120 132 132 LYS LYS B . n A 1 121 VAL 121 133 133 VAL VAL B . n A 1 122 LYS 122 134 ? ? ? B . n A 1 123 PRO 123 135 ? ? ? B . n B 2 1 HIS 1 3 3 HIS HIS P . n B 2 2 PRO 2 4 4 PRO PRO P . n B 2 3 GLN 3 5 5 GLN GLN P . n B 2 4 GLY 4 6 6 GLY GLY P . n B 2 5 PRO 5 7 7 PRO PRO P . n B 2 6 PRO 6 8 8 PRO PRO P . n B 2 7 CYS 7 1 1 CYS CYS P . n B 2 8 LYS 8 9 9 LYS LYS P . n B 2 9 NH2 9 10 10 NH2 NH2 P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LEA 1 2 2 LEA PNO P . D 4 HOH 1 136 134 HOH HOH B . D 4 HOH 2 137 135 HOH HOH B . D 4 HOH 3 138 138 HOH HOH B . D 4 HOH 4 139 139 HOH HOH B . D 4 HOH 5 140 145 HOH HOH B . D 4 HOH 6 141 147 HOH HOH B . D 4 HOH 7 142 148 HOH HOH B . D 4 HOH 8 143 149 HOH HOH B . D 4 HOH 9 144 150 HOH HOH B . D 4 HOH 10 145 151 HOH HOH B . D 4 HOH 11 146 159 HOH HOH B . D 4 HOH 12 147 160 HOH HOH B . D 4 HOH 13 148 161 HOH HOH B . D 4 HOH 14 149 163 HOH HOH B . D 4 HOH 15 150 164 HOH HOH B . D 4 HOH 16 151 166 HOH HOH B . D 4 HOH 17 152 169 HOH HOH B . D 4 HOH 18 153 170 HOH HOH B . D 4 HOH 19 154 171 HOH HOH B . D 4 HOH 20 155 173 HOH HOH B . D 4 HOH 21 156 188 HOH HOH B . D 4 HOH 22 157 192 HOH HOH B . D 4 HOH 23 158 193 HOH HOH B . D 4 HOH 24 159 205 HOH HOH B . D 4 HOH 25 160 212 HOH HOH B . D 4 HOH 26 161 224 HOH HOH B . D 4 HOH 27 162 228 HOH HOH B . D 4 HOH 28 163 231 HOH HOH B . D 4 HOH 29 164 233 HOH HOH B . D 4 HOH 30 165 234 HOH HOH B . D 4 HOH 31 166 244 HOH HOH B . D 4 HOH 32 167 251 HOH HOH B . D 4 HOH 33 168 253 HOH HOH B . D 4 HOH 34 169 263 HOH HOH B . D 4 HOH 35 170 274 HOH HOH B . D 4 HOH 36 171 278 HOH HOH B . D 4 HOH 37 172 279 HOH HOH B . D 4 HOH 38 173 293 HOH HOH B . D 4 HOH 39 174 305 HOH HOH B . D 4 HOH 40 175 313 HOH HOH B . D 4 HOH 41 176 341 HOH HOH B . D 4 HOH 42 177 354 HOH HOH B . D 4 HOH 43 178 359 HOH HOH B . D 4 HOH 44 179 371 HOH HOH B . D 4 HOH 45 180 380 HOH HOH B . D 4 HOH 46 181 384 HOH HOH B . D 4 HOH 47 182 400 HOH HOH B . D 4 HOH 48 183 484 HOH HOH B . D 4 HOH 49 184 508 HOH HOH B . D 4 HOH 50 185 515 HOH HOH B . D 4 HOH 51 186 518 HOH HOH B . D 4 HOH 52 187 536 HOH HOH B . D 4 HOH 53 188 537 HOH HOH B . D 4 HOH 54 189 544 HOH HOH B . D 4 HOH 55 190 550 HOH HOH B . D 4 HOH 56 191 551 HOH HOH B . D 4 HOH 57 192 562 HOH HOH B . D 4 HOH 58 193 567 HOH HOH B . D 4 HOH 59 194 578 HOH HOH B . D 4 HOH 60 195 581 HOH HOH B . D 4 HOH 61 196 584 HOH HOH B . D 4 HOH 62 197 589 HOH HOH B . D 4 HOH 63 198 590 HOH HOH B . D 4 HOH 64 199 597 HOH HOH B . D 4 HOH 65 200 598 HOH HOH B . D 4 HOH 66 201 600 HOH HOH B . D 4 HOH 67 202 601 HOH HOH B . D 4 HOH 68 203 605 HOH HOH B . D 4 HOH 69 204 612 HOH HOH B . E 4 HOH 1 143 143 HOH HOH P . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B PRO 64 ? N A A PRO 52 N 2 1 Y 0 B PRO 64 ? CA A A PRO 52 CA 3 1 Y 0 B PRO 64 ? C A A PRO 52 C 4 1 Y 0 B PRO 64 ? O A A PRO 52 O 5 1 Y 0 B PRO 64 ? CB A A PRO 52 CB 6 1 Y 0 B PRO 64 ? CG A A PRO 52 CG 7 1 Y 0 B PRO 64 ? CD A A PRO 52 CD 8 1 Y 0 B ALA 65 ? N B A ALA 53 N 9 1 Y 0 B ALA 65 ? CA B A ALA 53 CA 10 1 Y 0 B ALA 65 ? C B A ALA 53 C 11 1 Y 0 B ALA 65 ? O B A ALA 53 O 12 1 Y 0 B ALA 65 ? CB B A ALA 53 CB 13 1 Y 0 B GLU 101 ? CG ? A GLU 89 CG 14 1 Y 0 B GLU 101 ? CD ? A GLU 89 CD 15 1 Y 0 B GLU 101 ? OE1 ? A GLU 89 OE1 16 1 Y 0 B GLU 101 ? OE2 ? A GLU 89 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 bioteX 'data reduction' '(MSC)' ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1VWR _cell.length_a 57.990 _cell.length_b 57.990 _cell.length_c 175.650 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VWR _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 # _exptl.entry_id 1VWR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_percent_sol 30.7 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'SYNTHETIC MOTHER LIQUOR = 75 % SATURATED AMMONIUM SULFATE, 25 % 1.0 M POTASSIUM ACETATE ADJUSTED TO PH 3.5.' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VWR _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 27343 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.0680000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1VWR _refine.ls_number_reflns_obs 17621 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 7.5 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 72.4 _refine.ls_R_factor_obs 0.2060000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2060000 _refine.ls_R_factor_R_free 0.2460000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10. _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE FOLLOWING ATOMS HAD WEAK DENSITY AND OCCUPANCIES WERE REFINED: 13, 14, 15, (MAIN CHAIN OF GLN 24), (SIDE CHAIN OF GLN 24), (N, HN, CA, HA1, HA2 OF GLY 26), (MAIN CHAIN OF ALA 35), (SIDE CHAIN OF ALA 35), (CG, OD1, AND OD2 OF ASP 36), 46, 47, 48, 49, 50, (MAIN CHAIN AND CB, HB1, HB2 OF GLU 51), (CG, HG1, HG2, CD, OE1, OE2 OF GLU 51), (SIDE CHAIN OF SER 52), (TERMINUS OF ARG 53), GLY 99, ALA 100, (N AND HN OF GLU 101), (CG, HG1, HG2, CD, OE1, OE2 OF GLU 101), TERMINUS OF ARG 103, (CD, OE1, OE2 OF GLU 116), (N, HN, CA, HA OF ALA 117), (CB, HB1, HB2, HB3 OF ALA 117), LYS 121 FROM CG OUTWARD, LYS 132 SIDE CHAIN, (LYS P 9 AND NH2 P 10). RESIDUES 60 - 69 WERE REFINED IN 2 CONFORMATIONS BECAUSE UPON PROTONATION OF ASP 61 AT LOW PH, ASP 61 UNDERGOES A LARGE SHIFT IN CONFORMATION AND CHANGE IN HYDROGEN BONDING. THE LOOP COMPRISING RESIDUES 61 - 69 ALSO UNDERGO CORRESPONDING CONFORMATIONAL CHANGES. HOWEVER SOME OF THESE RESIDUES ARE DISORDERED AND NOT VISIBLE IN EITHER CONFORMATION. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2042 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 2264 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 7.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 4.2 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.4 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.57 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 39.7 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 I4VAL35_PARMALLH3X.PRO I4VAL35_TOPALLH6X_BAK.PRO 'X-RAY DIFFRACTION' 2 PARAM11_UCSF.WAT TOPH19.PEP 'X-RAY DIFFRACTION' 3 PARAM19XB2_KBCO.PRO TOPH19XB2_KBCO.PRO 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1VWR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VWR _struct.title 'STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 3.5, I4122 COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VWR _struct_keywords.pdbx_keywords 'COMPLEX (BIOTIN-BINDING PROTEIN/PEPTIDE)' _struct_keywords.text ;COMPLEX (BIOTIN-BINDING PROTEIN-PEPTIDE), CYCLIC PEPTIDE DISCOVERED BY PHAGE DISPLAY, COMPLEX (BIOTIN-BINDING PROTEIN-PEPTIDE) complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP SAV_STRAV 1 P22629 1 ;MRKIVVAAIAVSLTTVSITASASADPSKDSKAQVSAAEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVL TGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKPS AASIDAAKKAGVNNGNPLDAVQQ ; ? 2 PDB 1VWR 2 1VWR ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VWR B 1 ? 123 ? P22629 37 ? 159 ? 13 135 2 2 1VWR P 1 ? 9 ? 1VWR 3 ? 10 ? 3 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 15_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 10_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 8_555 -y,-x,-z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 38 ? SER A 40 ? ALA B 50 SER B 52 5 ? 3 HELX_P HELX_P2 2 ALA A 107 ? LYS A 109 ? ALA B 119 LYS B 121 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? B CYS 7 SG ? ? ? 1_555 C LEA . C6 ? ? P CYS 1 P LEA 2 1_555 ? ? ? ? ? ? ? 1.813 ? ? covale2 covale one ? C LEA . C2 ? ? ? 1_555 B HIS 1 N ? ? P LEA 2 P HIS 3 1_555 ? ? ? ? ? ? ? 1.306 ? ? covale3 covale both ? B LYS 8 C ? ? ? 1_555 B NH2 9 N ? ? P LYS 9 P NH2 10 1_555 ? ? ? ? ? ? ? 1.288 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NH2 B 9 ? LYS B 8 ? NH2 P 10 ? 1_555 LYS P 9 ? 1_555 . . LYS 20 NH2 None 'Terminal amidation' 2 LEA C . ? HIS B 1 ? LEA P 2 ? 1_555 HIS P 3 ? 1_555 C2 N HIS 1 LEA Pentanoylation Lipid/lipid-like 3 LEA C . ? CYS B 7 ? LEA P 2 ? 1_555 CYS P 1 ? 1_555 C6 SG CYS 3 LEA Pentanoylation Lipid/lipid-like # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 7 ? TYR A 10 ? GLY B 19 TYR B 22 A 2 THR A 16 ? ALA A 21 ? THR B 28 ALA B 33 A 3 ALA A 26 ? GLU A 32 ? ALA B 38 GLU B 44 A 4 ARG A 41 ? TYR A 48 ? ARG B 53 TYR B 60 A 5 THR A 59 ? ALA A 66 ? THR B 71 ALA B 78 A 6 SER A 76 ? VAL A 85 ? SER B 88 VAL B 97 A 7 ARG A 91 ? SER A 100 ? ARG B 103 SER B 112 A 8 THR A 111 ? THR A 119 ? THR B 123 THR B 131 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 7 ? O GLY B 19 N VAL A 19 ? N VAL B 31 A 2 3 O THR A 16 ? O THR B 28 N GLU A 32 ? N GLU B 44 A 3 4 O LEU A 27 ? O LEU B 39 N GLY A 46 ? N GLY B 58 A 4 5 O THR A 45 ? O THR B 57 N THR A 64 ? N THR B 76 A 5 6 O THR A 59 ? O THR B 71 N TYR A 84 ? N TYR B 96 A 6 7 O ALA A 77 ? O ALA B 89 N THR A 99 ? N THR B 111 A 7 8 O ILE A 92 ? O ILE B 104 N PHE A 118 ? N PHE B 130 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id P _struct_site.pdbx_auth_comp_id LEA _struct_site.pdbx_auth_seq_id 2 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE LEA P 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 72 ? ARG B 84 . ? 1_555 ? 2 AC1 5 CYS B 7 ? CYS P 1 . ? 1_555 ? 3 AC1 5 CYS B 7 ? CYS P 1 . ? 5_554 ? 4 AC1 5 HIS B 1 ? HIS P 3 . ? 1_555 ? 5 AC1 5 PRO B 2 ? PRO P 4 . ? 1_555 ? # _pdbx_entry_details.entry_id 1VWR _pdbx_entry_details.compound_details ;DISULFIDE BOND OF PHAGE-DISCOVERED PEPTIDE IS REPLACED WITH THIOETHER. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 H2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 136 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 137 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.28 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 186 ? ? 1_555 H2 B HOH 186 ? ? 5_454 0.36 2 1 H1 B HOH 186 ? ? 1_555 H1 B HOH 186 ? ? 5_454 0.77 3 1 O B HOH 186 ? ? 1_555 O B HOH 186 ? ? 5_454 0.78 4 1 H2 B HOH 151 ? ? 1_555 H1 B HOH 177 ? ? 8_555 0.87 5 1 O B HOH 151 ? ? 1_555 H1 B HOH 177 ? ? 8_555 0.95 6 1 H2 B HOH 186 ? ? 1_555 H2 B HOH 186 ? ? 5_454 1.13 7 1 O B HOH 186 ? ? 1_555 H1 B HOH 186 ? ? 5_454 1.28 8 1 H1 B HOH 186 ? ? 1_555 H2 B HOH 186 ? ? 5_454 1.35 9 1 OH B TYR 43 ? ? 1_555 H2 B HOH 193 ? ? 15_555 1.39 10 1 O B HOH 151 ? ? 1_555 O B HOH 177 ? ? 8_555 1.79 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE2 B HIS 127 ? ? CD2 B HIS 127 ? ? 1.304 1.373 -0.069 0.011 N 2 1 NE2 P HIS 3 ? ? CD2 P HIS 3 ? ? 1.291 1.373 -0.082 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG B TRP 21 ? ? CD1 B TRP 21 ? ? NE1 B TRP 21 ? ? 103.52 110.10 -6.58 1.00 N 2 1 CD1 B TRP 21 ? ? NE1 B TRP 21 ? ? CE2 B TRP 21 ? ? 116.95 109.00 7.95 0.90 N 3 1 NE1 B TRP 21 ? ? CE2 B TRP 21 ? ? CZ2 B TRP 21 ? ? 137.89 130.40 7.49 1.10 N 4 1 NE1 B TRP 21 ? ? CE2 B TRP 21 ? ? CD2 B TRP 21 ? ? 101.29 107.30 -6.01 1.00 N 5 1 CB B ASP 61 ? B CG B ASP 61 ? B OD1 B ASP 61 ? B 112.42 118.30 -5.88 0.90 N 6 1 CB B ASP 61 ? B CG B ASP 61 ? B OD2 B ASP 61 ? B 124.37 118.30 6.07 0.90 N 7 1 CG B TRP 75 ? ? CD1 B TRP 75 ? ? NE1 B TRP 75 ? ? 102.06 110.10 -8.04 1.00 N 8 1 CD1 B TRP 75 ? ? NE1 B TRP 75 ? ? CE2 B TRP 75 ? ? 118.28 109.00 9.28 0.90 N 9 1 NE1 B TRP 75 ? ? CE2 B TRP 75 ? ? CZ2 B TRP 75 ? ? 139.16 130.40 8.76 1.10 N 10 1 NE1 B TRP 75 ? ? CE2 B TRP 75 ? ? CD2 B TRP 75 ? ? 101.20 107.30 -6.10 1.00 N 11 1 CG B TRP 79 ? ? CD1 B TRP 79 ? ? NE1 B TRP 79 ? ? 103.52 110.10 -6.58 1.00 N 12 1 CD1 B TRP 79 ? ? NE1 B TRP 79 ? ? CE2 B TRP 79 ? ? 116.56 109.00 7.56 0.90 N 13 1 NE B ARG 84 ? B CZ B ARG 84 ? B NH2 B ARG 84 ? B 116.91 120.30 -3.39 0.50 N 14 1 CG B TRP 92 ? ? CD1 B TRP 92 ? ? NE1 B TRP 92 ? ? 102.34 110.10 -7.76 1.00 N 15 1 CD1 B TRP 92 ? ? NE1 B TRP 92 ? ? CE2 B TRP 92 ? ? 117.94 109.00 8.94 0.90 N 16 1 NE1 B TRP 92 ? ? CE2 B TRP 92 ? ? CZ2 B TRP 92 ? ? 137.87 130.40 7.47 1.10 N 17 1 CG B TRP 108 ? ? CD1 B TRP 108 ? ? NE1 B TRP 108 ? ? 103.32 110.10 -6.78 1.00 N 18 1 CD1 B TRP 108 ? ? NE1 B TRP 108 ? ? CE2 B TRP 108 ? ? 116.75 109.00 7.75 0.90 N 19 1 NE1 B TRP 108 ? ? CE2 B TRP 108 ? ? CZ2 B TRP 108 ? ? 138.69 130.40 8.29 1.10 N 20 1 CG B TRP 120 ? ? CD1 B TRP 120 ? ? NE1 B TRP 120 ? ? 102.28 110.10 -7.82 1.00 N 21 1 CD1 B TRP 120 ? ? NE1 B TRP 120 ? ? CE2 B TRP 120 ? ? 118.59 109.00 9.59 0.90 N 22 1 NE1 B TRP 120 ? ? CE2 B TRP 120 ? ? CZ2 B TRP 120 ? ? 140.79 130.40 10.39 1.10 N 23 1 NE1 B TRP 120 ? ? CE2 B TRP 120 ? ? CD2 B TRP 120 ? ? 99.95 107.30 -7.35 1.00 N 24 1 CA P CYS 1 ? ? CB P CYS 1 ? ? SG P CYS 1 ? ? 123.89 114.20 9.69 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 14 ? ? 41.25 -74.66 2 1 GLN B 24 ? ? -68.75 2.19 3 1 VAL B 47 ? ? 95.04 -62.61 4 1 ALA B 50 ? ? -13.22 -68.56 5 1 GLU B 51 ? ? -59.85 10.06 6 1 TYR B 83 ? ? -143.00 -23.06 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG B 53 ? ? 0.082 'SIDE CHAIN' 2 1 ARG B 103 ? ? 0.122 'SIDE CHAIN' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 139 ? D HOH . 2 1 B HOH 139 ? D HOH . 3 1 B HOH 174 ? D HOH . 4 1 B HOH 175 ? D HOH . 5 1 B HOH 198 ? D HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 0 B ALA 46 ? A ALA 34 2 1 Y 0 B VAL 47 ? A VAL 35 3 1 Y 0 B THR 66 ? A THR 54 4 1 Y 1 B LYS 134 ? A LYS 122 5 1 Y 1 B PRO 135 ? A PRO 123 6 1 Y 0 P LYS 9 ? B LYS 8 7 1 Y 0 P NH2 10 ? B NH2 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEA C2 C N N 183 LEA O2 O N N 184 LEA C3 C N N 185 LEA C4 C N N 186 LEA C5 C N N 187 LEA C6 C N N 188 LEA O1 O N N 189 LEA HO2 H N N 190 LEA H31 H N N 191 LEA H32 H N N 192 LEA H41 H N N 193 LEA H42 H N N 194 LEA H51 H N N 195 LEA H52 H N N 196 LEA H61 H N N 197 LEA H62 H N N 198 LEA H63 H N N 199 LEU N N N N 200 LEU CA C N S 201 LEU C C N N 202 LEU O O N N 203 LEU CB C N N 204 LEU CG C N N 205 LEU CD1 C N N 206 LEU CD2 C N N 207 LEU OXT O N N 208 LEU H H N N 209 LEU H2 H N N 210 LEU HA H N N 211 LEU HB2 H N N 212 LEU HB3 H N N 213 LEU HG H N N 214 LEU HD11 H N N 215 LEU HD12 H N N 216 LEU HD13 H N N 217 LEU HD21 H N N 218 LEU HD22 H N N 219 LEU HD23 H N N 220 LEU HXT H N N 221 LYS N N N N 222 LYS CA C N S 223 LYS C C N N 224 LYS O O N N 225 LYS CB C N N 226 LYS CG C N N 227 LYS CD C N N 228 LYS CE C N N 229 LYS NZ N N N 230 LYS OXT O N N 231 LYS H H N N 232 LYS H2 H N N 233 LYS HA H N N 234 LYS HB2 H N N 235 LYS HB3 H N N 236 LYS HG2 H N N 237 LYS HG3 H N N 238 LYS HD2 H N N 239 LYS HD3 H N N 240 LYS HE2 H N N 241 LYS HE3 H N N 242 LYS HZ1 H N N 243 LYS HZ2 H N N 244 LYS HZ3 H N N 245 LYS HXT H N N 246 NH2 N N N N 247 NH2 HN1 H N N 248 NH2 HN2 H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEA C2 O2 sing N N 173 LEA C2 C3 sing N N 174 LEA C2 O1 doub N N 175 LEA O2 HO2 sing N N 176 LEA C3 C4 sing N N 177 LEA C3 H31 sing N N 178 LEA C3 H32 sing N N 179 LEA C4 C5 sing N N 180 LEA C4 H41 sing N N 181 LEA C4 H42 sing N N 182 LEA C5 C6 sing N N 183 LEA C5 H51 sing N N 184 LEA C5 H52 sing N N 185 LEA C6 H61 sing N N 186 LEA C6 H62 sing N N 187 LEA C6 H63 sing N N 188 LEU N CA sing N N 189 LEU N H sing N N 190 LEU N H2 sing N N 191 LEU CA C sing N N 192 LEU CA CB sing N N 193 LEU CA HA sing N N 194 LEU C O doub N N 195 LEU C OXT sing N N 196 LEU CB CG sing N N 197 LEU CB HB2 sing N N 198 LEU CB HB3 sing N N 199 LEU CG CD1 sing N N 200 LEU CG CD2 sing N N 201 LEU CG HG sing N N 202 LEU CD1 HD11 sing N N 203 LEU CD1 HD12 sing N N 204 LEU CD1 HD13 sing N N 205 LEU CD2 HD21 sing N N 206 LEU CD2 HD22 sing N N 207 LEU CD2 HD23 sing N N 208 LEU OXT HXT sing N N 209 LYS N CA sing N N 210 LYS N H sing N N 211 LYS N H2 sing N N 212 LYS CA C sing N N 213 LYS CA CB sing N N 214 LYS CA HA sing N N 215 LYS C O doub N N 216 LYS C OXT sing N N 217 LYS CB CG sing N N 218 LYS CB HB2 sing N N 219 LYS CB HB3 sing N N 220 LYS CG CD sing N N 221 LYS CG HG2 sing N N 222 LYS CG HG3 sing N N 223 LYS CD CE sing N N 224 LYS CD HD2 sing N N 225 LYS CD HD3 sing N N 226 LYS CE NZ sing N N 227 LYS CE HE2 sing N N 228 LYS CE HE3 sing N N 229 LYS NZ HZ1 sing N N 230 LYS NZ HZ2 sing N N 231 LYS NZ HZ3 sing N N 232 LYS OXT HXT sing N N 233 NH2 N HN1 sing N N 234 NH2 N HN2 sing N N 235 PHE N CA sing N N 236 PHE N H sing N N 237 PHE N H2 sing N N 238 PHE CA C sing N N 239 PHE CA CB sing N N 240 PHE CA HA sing N N 241 PHE C O doub N N 242 PHE C OXT sing N N 243 PHE CB CG sing N N 244 PHE CB HB2 sing N N 245 PHE CB HB3 sing N N 246 PHE CG CD1 doub Y N 247 PHE CG CD2 sing Y N 248 PHE CD1 CE1 sing Y N 249 PHE CD1 HD1 sing N N 250 PHE CD2 CE2 doub Y N 251 PHE CD2 HD2 sing N N 252 PHE CE1 CZ doub Y N 253 PHE CE1 HE1 sing N N 254 PHE CE2 CZ sing Y N 255 PHE CE2 HE2 sing N N 256 PHE CZ HZ sing N N 257 PHE OXT HXT sing N N 258 PRO N CA sing N N 259 PRO N CD sing N N 260 PRO N H sing N N 261 PRO CA C sing N N 262 PRO CA CB sing N N 263 PRO CA HA sing N N 264 PRO C O doub N N 265 PRO C OXT sing N N 266 PRO CB CG sing N N 267 PRO CB HB2 sing N N 268 PRO CB HB3 sing N N 269 PRO CG CD sing N N 270 PRO CG HG2 sing N N 271 PRO CG HG3 sing N N 272 PRO CD HD2 sing N N 273 PRO CD HD3 sing N N 274 PRO OXT HXT sing N N 275 SER N CA sing N N 276 SER N H sing N N 277 SER N H2 sing N N 278 SER CA C sing N N 279 SER CA CB sing N N 280 SER CA HA sing N N 281 SER C O doub N N 282 SER C OXT sing N N 283 SER CB OG sing N N 284 SER CB HB2 sing N N 285 SER CB HB3 sing N N 286 SER OG HG sing N N 287 SER OXT HXT sing N N 288 THR N CA sing N N 289 THR N H sing N N 290 THR N H2 sing N N 291 THR CA C sing N N 292 THR CA CB sing N N 293 THR CA HA sing N N 294 THR C O doub N N 295 THR C OXT sing N N 296 THR CB OG1 sing N N 297 THR CB CG2 sing N N 298 THR CB HB sing N N 299 THR OG1 HG1 sing N N 300 THR CG2 HG21 sing N N 301 THR CG2 HG22 sing N N 302 THR CG2 HG23 sing N N 303 THR OXT HXT sing N N 304 TRP N CA sing N N 305 TRP N H sing N N 306 TRP N H2 sing N N 307 TRP CA C sing N N 308 TRP CA CB sing N N 309 TRP CA HA sing N N 310 TRP C O doub N N 311 TRP C OXT sing N N 312 TRP CB CG sing N N 313 TRP CB HB2 sing N N 314 TRP CB HB3 sing N N 315 TRP CG CD1 doub Y N 316 TRP CG CD2 sing Y N 317 TRP CD1 NE1 sing Y N 318 TRP CD1 HD1 sing N N 319 TRP CD2 CE2 doub Y N 320 TRP CD2 CE3 sing Y N 321 TRP NE1 CE2 sing Y N 322 TRP NE1 HE1 sing N N 323 TRP CE2 CZ2 sing Y N 324 TRP CE3 CZ3 doub Y N 325 TRP CE3 HE3 sing N N 326 TRP CZ2 CH2 doub Y N 327 TRP CZ2 HZ2 sing N N 328 TRP CZ3 CH2 sing Y N 329 TRP CZ3 HZ3 sing N N 330 TRP CH2 HH2 sing N N 331 TRP OXT HXT sing N N 332 TYR N CA sing N N 333 TYR N H sing N N 334 TYR N H2 sing N N 335 TYR CA C sing N N 336 TYR CA CB sing N N 337 TYR CA HA sing N N 338 TYR C O doub N N 339 TYR C OXT sing N N 340 TYR CB CG sing N N 341 TYR CB HB2 sing N N 342 TYR CB HB3 sing N N 343 TYR CG CD1 doub Y N 344 TYR CG CD2 sing Y N 345 TYR CD1 CE1 sing Y N 346 TYR CD1 HD1 sing N N 347 TYR CD2 CE2 doub Y N 348 TYR CD2 HD2 sing N N 349 TYR CE1 CZ doub Y N 350 TYR CE1 HE1 sing N N 351 TYR CE2 CZ sing Y N 352 TYR CE2 HE2 sing N N 353 TYR CZ OH sing N N 354 TYR OH HH sing N N 355 TYR OXT HXT sing N N 356 VAL N CA sing N N 357 VAL N H sing N N 358 VAL N H2 sing N N 359 VAL CA C sing N N 360 VAL CA CB sing N N 361 VAL CA HA sing N N 362 VAL C O doub N N 363 VAL C OXT sing N N 364 VAL CB CG1 sing N N 365 VAL CB CG2 sing N N 366 VAL CB HB sing N N 367 VAL CG1 HG11 sing N N 368 VAL CG1 HG12 sing N N 369 VAL CG1 HG13 sing N N 370 VAL CG2 HG21 sing N N 371 VAL CG2 HG22 sing N N 372 VAL CG2 HG23 sing N N 373 VAL OXT HXT sing N N 374 # _atom_sites.entry_id 1VWR _atom_sites.fract_transf_matrix[1][1] 0.017244 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005693 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_