HEADER SYNTHASE 25-MAY-04 1VZS TITLE SOLUTION STRUCTURE OF SUBUNIT F6 FROM THE PERIPHERAL STALK REGION OF TITLE 2 ATP SYNTHASE FROM BOVINE HEART MITOCHONDRIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: F6; COMPND 5 EC: 3.6.3.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: HEART; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS SYNTHASE, ATP SYNTHASE, PERIPHERAL STALK, F6 SUBUNIT, HYDROGEN ION KEYWDS 2 TRANSPORT EXPDTA SOLUTION NMR NUMMDL 34 AUTHOR R.J.CARBAJO,J.A.SILVESTER,M.J.RUNSWICK,J.E.WALKER,D.NEUHAUS REVDAT 5 15-MAY-24 1VZS 1 REMARK REVDAT 4 24-JAN-18 1VZS 1 SOURCE REVDAT 3 24-MAR-09 1VZS 1 REMARK MASTER REVDAT 2 24-FEB-09 1VZS 1 VERSN REVDAT 1 02-SEP-04 1VZS 0 JRNL AUTH R.J.CARBAJO,J.A.SILVESTER,M.J.RUNSWICK,J.E.WALKER,D.NEUHAUS JRNL TITL SOLUTION STRUCTURE OF SUBUNIT F(6) FROM THE PERIPHERAL STALK JRNL TITL 2 REGION OF ATP SYNTHASE FROM BOVINE HEART MITOCHONDRIA JRNL REF J.MOL.BIOL. V. 342 593 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15327958 JRNL DOI 10.1016/J.JMB.2004.07.013 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VZS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1290015321. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 95% H2O, 5% D2O, 50MM NACL, 20 REMARK 210 MM PHOSPHATE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; TOCSY; HSQC; NOESY-HSQC; REMARK 210 TOCSY-HSQC; HCCH-COSY; HNCA; REMARK 210 CBCACONH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DMX; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 34 REMARK 210 CONFORMERS, SELECTION CRITERIA : JUMP IN TOTAL ENERGIES REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THIS IS ONE OF THE CHAINS OF THE NONENZYMATIC COMPONENT REMARK 400 (CF(0) SUBUNIT) OF THE MITOCHONDRIAL ATPASE COMPLEX. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 35 H ASP A 38 1.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 -74.04 -68.63 REMARK 500 1 GLU A 3 33.72 -158.47 REMARK 500 1 LEU A 4 104.05 178.32 REMARK 500 1 VAL A 7 -44.96 177.20 REMARK 500 1 THR A 24 -86.21 52.86 REMARK 500 1 SER A 25 38.28 -168.55 REMARK 500 1 VAL A 29 160.98 51.38 REMARK 500 1 ASN A 60 46.54 178.61 REMARK 500 1 PHE A 61 87.35 45.32 REMARK 500 1 THR A 62 -79.89 -95.73 REMARK 500 1 GLU A 64 -37.89 -177.35 REMARK 500 1 ASP A 65 157.99 -47.43 REMARK 500 1 GLU A 69 87.97 -57.97 REMARK 500 1 VAL A 70 -44.96 -135.31 REMARK 500 1 VAL A 71 55.77 -147.15 REMARK 500 1 LYS A 73 -53.76 177.31 REMARK 500 2 LYS A 2 -40.88 -175.75 REMARK 500 2 GLU A 3 81.68 62.29 REMARK 500 2 LEU A 4 -82.79 -148.20 REMARK 500 2 VAL A 7 -46.61 178.59 REMARK 500 2 GLN A 23 41.45 -102.68 REMARK 500 2 GLU A 34 26.81 -152.09 REMARK 500 2 ALA A 53 -66.80 -123.56 REMARK 500 2 ASP A 54 -36.32 -179.71 REMARK 500 2 ASN A 56 31.16 -155.72 REMARK 500 2 THR A 57 -51.43 -154.98 REMARK 500 2 PHE A 61 83.80 -179.67 REMARK 500 2 THR A 62 -44.86 -167.30 REMARK 500 2 GLU A 69 -47.05 -172.95 REMARK 500 2 GLU A 72 -69.13 68.35 REMARK 500 2 GLN A 75 -68.55 -160.43 REMARK 500 3 LYS A 2 -69.76 68.18 REMARK 500 3 ASP A 5 159.63 173.69 REMARK 500 3 VAL A 7 -43.55 179.22 REMARK 500 3 GLN A 23 40.59 -96.95 REMARK 500 3 SER A 25 149.99 -176.81 REMARK 500 3 LYS A 52 18.87 -145.90 REMARK 500 3 ASP A 54 86.37 59.49 REMARK 500 3 THR A 57 -47.36 -134.92 REMARK 500 3 PRO A 59 46.82 -78.01 REMARK 500 3 PHE A 61 98.44 60.33 REMARK 500 3 THR A 62 31.67 -150.10 REMARK 500 3 LYS A 67 -21.04 87.35 REMARK 500 3 LYS A 73 54.09 -153.45 REMARK 500 3 GLN A 75 98.10 60.45 REMARK 500 4 GLU A 3 -57.97 -155.43 REMARK 500 4 LEU A 4 -58.82 -134.65 REMARK 500 4 ASP A 5 169.50 167.70 REMARK 500 4 VAL A 7 -47.02 -178.28 REMARK 500 4 THR A 24 37.49 -169.93 REMARK 500 REMARK 500 THIS ENTRY HAS 646 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1VZS A 1 76 UNP P02721 ATPR_BOVIN 33 108 SEQRES 1 A 76 ASN LYS GLU LEU ASP PRO VAL GLN LYS LEU PHE VAL ASP SEQRES 2 A 76 LYS ILE ARG GLU TYR ARG THR LYS ARG GLN THR SER GLY SEQRES 3 A 76 GLY PRO VAL ASP ALA GLY PRO GLU TYR GLN GLN ASP LEU SEQRES 4 A 76 ASP ARG GLU LEU PHE LYS LEU LYS GLN MET TYR GLY LYS SEQRES 5 A 76 ALA ASP MET ASN THR PHE PRO ASN PHE THR PHE GLU ASP SEQRES 6 A 76 PRO LYS PHE GLU VAL VAL GLU LYS PRO GLN SER HELIX 1 1 VAL A 7 THR A 24 1 18 HELIX 2 2 TYR A 35 ASP A 54 1 20 HELIX 3 3 ASP A 65 GLU A 69 5 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1