HEADER    HYDROLASE                               24-AUG-04   1W6V              
TITLE     SOLUTION STRUCTURE OF THE DUSP DOMAIN OF HUSP15                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15;                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: DUSP DOMAIN, RESIDUES 1-120;                               
COMPND   5 SYNONYM: UBIQUITIN THIOLESTERASE 15, UBIQUITIN-SPECIFIC PROCESSING   
COMPND   6 PROTEASE 15, UBIQUITINATING ENZYME 15, UNPH-2, UNPH4;                
COMPND   7 EC: 3.1.2.15;                                                        
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET15B;                                   
SOURCE   9 OTHER_DETAILS: SELF MADE CDNA LIBRARY OF MULTIPLE HUMAN CARCINOMA    
SOURCE  10 CELL LINES                                                           
KEYWDS    HYDROLASE, UCH, USP, DUB, DEUBIQUITYLATION, DEUBIQUITINATING ENZYME,  
KEYWDS   2 UBIQUITIN, UBIQUITIN SPECIFIC PROTEASE, UBIQUITIN CARBOXYTERMINAL    
KEYWDS   3 HYDROLASE, CLEAVAGE, USP15, DUB15, UBP15, ENDOPEPTIDASE,             
KEYWDS   4 THIOLESTERASE, DUSP, STRUCTURAL PROTEOMICS IN EUROPE, SPINE,         
KEYWDS   5 STRUCTURAL GENOMICS                                                  
EXPDTA    SOLUTION NMR                                                          
NUMMDL    13                                                                    
AUTHOR    R.D.DE JONG,E.AB,T.DIERCKS,V.TRUFFAULT,M.DANIELS,R.KAPTEIN,           
AUTHOR   2 G.E.FOLKERS                                                          
REVDAT   4   15-MAY-24 1W6V    1       REMARK                                   
REVDAT   3   24-FEB-09 1W6V    1       VERSN                                    
REVDAT   2   22-FEB-06 1W6V    1       JRNL                                     
REVDAT   1   12-JAN-06 1W6V    0                                                
JRNL        AUTH   R.N.DE JONG,E.AB,T.DIERCKS,V.TRUFFAULT,M.DANIELS,R.KAPTEIN,  
JRNL        AUTH 2 G.E.FOLKERS                                                  
JRNL        TITL   SOLUTION STRUCTURE OF THE HUMAN UBIQUITIN-SPECIFIC PROTEASE  
JRNL        TITL 2 15 DUSP DOMAIN.                                              
JRNL        REF    J.BIOL.CHEM.                  V. 281  5026 2006              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   16298993                                                     
JRNL        DOI    10.1074/JBC.M510993200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE    
REMARK   3  JRNL CITATION ABOVE.                                                
REMARK   4                                                                      
REMARK   4 1W6V COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-04.                  
REMARK 100 THE DEPOSITION ID IS D_1290020880.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298.0                              
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 150                                
REMARK 210  PRESSURE                       : 1.0 ATM                            
REMARK 210  SAMPLE CONTENTS                : 90% WATER/10% D2O                  
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : HNCO; HNCACO; HNCACB; CBCACONH;    
REMARK 210                                   HBHACONH; HNCAHA; CCH-COSY; HCCH-  
REMARK 210                                   TOCSY; HNH-NOESY; HCH-NOESY; CNH-  
REMARK 210                                   NOESY; HH-NOESY                    
REMARK 210  SPECTROMETER FIELD STRENGTH    : 700 MHZ                            
REMARK 210  SPECTROMETER MODEL             : DMX                                
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : SPARKY                             
REMARK 210   METHOD USED                   : CANDID IN CYANA AND CNS FOR        
REMARK 210                                   WATER REFINEMENT                   
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 20                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 13                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : SMALLEST MAXIMUM RESTRAINT         
REMARK 210                                   VIOLATION                          
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR      
REMARK 210  SPECTROSCOPY ON 15N- AND 13C, 15N-LABELED HIS-TAGGED HUSP15_1-120   
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 CATALYTIC ACTIVITY: UBIQUITIN C-TERMINAL THIOLESTER + H(2)O =        
REMARK 400  UBIQUITIN + A THIOL.                                                
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-13                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     MET A   -21                                                      
REMARK 465     GLY A   -20                                                      
REMARK 465     SER A   -19                                                      
REMARK 465     SER A   -18                                                      
REMARK 465     HIS A   -17                                                      
REMARK 465     HIS A   -16                                                      
REMARK 465     HIS A   -15                                                      
REMARK 465     HIS A   -14                                                      
REMARK 465     HIS A   -13                                                      
REMARK 465     HIS A   -12                                                      
REMARK 465     SER A   -11                                                      
REMARK 465     SER A   -10                                                      
REMARK 465     GLY A    -9                                                      
REMARK 465     LEU A    -8                                                      
REMARK 465     VAL A    -7                                                      
REMARK 465     PRO A    -6                                                      
REMARK 465     ARG A    -5                                                      
REMARK 465     GLY A    -4                                                      
REMARK 465     SER A    -3                                                      
REMARK 465     HIS A    -2                                                      
REMARK 465     MET A    -1                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500 13 LYS A  52   N   -  CA  -  CB  ANGL. DEV. = -12.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 GLU A   3      103.11     60.05                                   
REMARK 500  1 ALA A   6     -168.93     70.80                                   
REMARK 500  1 ARG A  25      112.01     63.67                                   
REMARK 500  1 ASP A  85     -151.82    -57.12                                   
REMARK 500  1 GLU A  86      -17.81    -39.24                                   
REMARK 500  1 THR A 105     -173.27     48.24                                   
REMARK 500  2 LYS A  52       18.77   -142.33                                   
REMARK 500  2 ALA A  76       13.59     58.22                                   
REMARK 500  2 ASP A  85     -139.52    -59.64                                   
REMARK 500  2 GLU A  86      -18.82    -41.44                                   
REMARK 500  2 THR A 105      167.28     58.30                                   
REMARK 500  3 ARG A  25     -157.45   -104.88                                   
REMARK 500  3 LYS A  52        9.68   -162.39                                   
REMARK 500  3 ASP A  85     -139.08    -62.87                                   
REMARK 500  3 THR A 105      172.00     56.64                                   
REMARK 500  3 VAL A 117     -172.11    -66.71                                   
REMARK 500  4 ARG A  25     -145.52   -127.23                                   
REMARK 500  4 THR A  29      110.20     49.55                                   
REMARK 500  4 LYS A  52       21.41   -156.91                                   
REMARK 500  4 ASP A  85     -139.98    -61.59                                   
REMARK 500  4 GLU A  86      -18.86    -40.33                                   
REMARK 500  4 THR A 105     -174.58     49.63                                   
REMARK 500  5 ARG A  25     -159.55   -104.59                                   
REMARK 500  5 LYS A  52       15.47   -157.50                                   
REMARK 500  5 LYS A  72     -176.95    -64.22                                   
REMARK 500  5 ASP A  85     -146.22    -62.55                                   
REMARK 500  5 GLU A  86      -18.19    -40.74                                   
REMARK 500  5 THR A 105     -174.11     50.62                                   
REMARK 500  5 VAL A 117     -176.85    -60.40                                   
REMARK 500  6 GLU A   3       85.84     58.88                                   
REMARK 500  6 LYS A  26       95.19    -67.90                                   
REMARK 500  6 ASP A  51       78.62   -103.37                                   
REMARK 500  6 LYS A  52        3.55   -169.92                                   
REMARK 500  6 MET A  55      109.17    -58.69                                   
REMARK 500  6 TYR A  61      100.47    -34.34                                   
REMARK 500  6 ASP A  85     -130.53    -60.62                                   
REMARK 500  6 GLU A  86      -17.39    -47.51                                   
REMARK 500  6 THR A 105      174.63     56.33                                   
REMARK 500  7 ALA A   6     -158.30     56.43                                   
REMARK 500  7 ARG A  25     -144.68   -105.51                                   
REMARK 500  7 LYS A  52       16.31   -145.93                                   
REMARK 500  7 SER A  68       24.57    -79.67                                   
REMARK 500  7 LYS A  72     -167.87    -74.64                                   
REMARK 500  7 ASP A  85     -134.53    -71.54                                   
REMARK 500  7 GLU A  86      -19.41    -45.53                                   
REMARK 500  7 THR A 105      168.37     57.77                                   
REMARK 500  8 GLU A   3      107.00     70.25                                   
REMARK 500  8 LYS A  72     -169.32    -69.90                                   
REMARK 500  8 ASP A  85     -141.15    -64.59                                   
REMARK 500  8 GLU A  86      -19.90    -40.88                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      81 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  5 ARG A  13         0.07    SIDE CHAIN                              
REMARK 500  6 ARG A  13         0.17    SIDE CHAIN                              
REMARK 500  9 ARG A  13         0.07    SIDE CHAIN                              
REMARK 500  9 ARG A 115         0.08    SIDE CHAIN                              
REMARK 500 10 ARG A  36         0.07    SIDE CHAIN                              
REMARK 500 11 ARG A  13         0.18    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 650                                                                      
REMARK 650 HELIX                                                                
REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED.                               
DBREF  1W6V A  -21    -1  PDB    1W6V     1W6V           -21     -1             
DBREF  1W6V A    1   120  UNP    Q9Y4E8   UB15_HUMAN       1    120             
SEQRES   1 A  141  MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY          
SEQRES   2 A  141  LEU VAL PRO ARG GLY SER HIS MET MET ALA GLU GLY GLY          
SEQRES   3 A  141  ALA ALA ASP LEU ASP THR GLN ARG SER ASP ILE ALA THR          
SEQRES   4 A  141  LEU LEU LYS THR SER LEU ARG LYS GLY ASP THR TRP TYR          
SEQRES   5 A  141  LEU VAL ASP SER ARG TRP PHE LYS GLN TRP LYS LYS TYR          
SEQRES   6 A  141  VAL GLY PHE ASP SER TRP ASP LYS TYR GLN MET GLY ASP          
SEQRES   7 A  141  GLN ASN VAL TYR PRO GLY PRO ILE ASP ASN SER GLY LEU          
SEQRES   8 A  141  LEU LYS ASP GLY ASP ALA GLN SER LEU LYS GLU HIS LEU          
SEQRES   9 A  141  ILE ASP GLU LEU ASP TYR ILE LEU LEU PRO THR GLU GLY          
SEQRES  10 A  141  TRP ASN LYS LEU VAL SER TRP TYR THR LEU MET GLU GLY          
SEQRES  11 A  141  GLN GLU PRO ILE ALA ARG LYS VAL VAL GLU GLN                  
HELIX    1   1 ASP A    8  LYS A   21  1                                  14    
HELIX    2   2 SER A   35  GLY A   46  1                                  12    
HELIX    3   3 PRO A   93  TYR A  104  1                                  12    
SHEET    1  AA 3 TYR A  89  LEU A  92  0                                        
SHEET    2  AA 3 THR A  29  ASP A  34 -1  O  TYR A  31   N  LEU A  92           
SHEET    3  AA 3 ALA A 114  LYS A 116 -1  O  ARG A 115   N  TRP A  30           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1