HEADER CARBOHYDRATE BINDING DOMAIN 01-OCT-04 1W90 TITLE CBM29-2 MUTANT D114A: PROBING THE MECHANISM OF LIGAND RECOGNITION BY TITLE 2 FAMILY 29 CARBOHYDRATE BINDING MODULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-CATALYTIC PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CARBOHYDRATE BINDING MODULE 2, RESIDUES 334-478; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PIROMYCES EQUI; SOURCE 3 ORGANISM_TAXID: 99929; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CARBOHYDRATE BINDING DOMAIN, CARBOHYDRATE BINDING MODULE, KEYWDS 2 GLUCOMANNAN, CELLOHEXAOSE, MANNOHEXAOSE, CELLULOSOME EXPDTA X-RAY DIFFRACTION AUTHOR J.FLINT,D.N.BOLAM,D.NURIZZO,E.J.TAYLOR,M.P.WILLIAMSON,C.WALTERS, AUTHOR 2 G.J.DAVIES,H.J.GILBERT REVDAT 5 13-DEC-23 1W90 1 LINK REVDAT 4 13-JUL-11 1W90 1 VERSN REVDAT 3 24-FEB-09 1W90 1 VERSN REVDAT 2 22-JUN-05 1W90 1 JRNL REVDAT 1 18-MAR-05 1W90 0 JRNL AUTH J.FLINT,D.N.BOLAM,D.NURIZZO,E.J.TAYLOR,M.P.WILLIAMSON, JRNL AUTH 2 C.WALTERS,G.J.DAVIES,H.J.GILBERT JRNL TITL PROBING THE MECHANISM OF LIGAND RECOGNITION IN FAMILY 29 JRNL TITL 2 CARBOHYDRATE-BINDING MODULES JRNL REF J.BIOL.CHEM. V. 280 23718 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15784618 JRNL DOI 10.1074/JBC.M501551200 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12394 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 660 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 892 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2310 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.443 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.629 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2385 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3228 ; 1.582 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 6.960 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;35.349 ;24.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 377 ;15.947 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;22.514 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1877 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 903 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1568 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 114 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.173 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.288 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.216 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1444 ; 0.596 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2320 ; 1.097 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 985 ; 2.032 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 908 ; 3.119 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 153 REMARK 3 ORIGIN FOR THE GROUP (A): 74.4340 45.0062 16.5365 REMARK 3 T TENSOR REMARK 3 T11: 0.0178 T22: -0.0634 REMARK 3 T33: -0.0744 T12: 0.0071 REMARK 3 T13: 0.0395 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 4.5393 L22: 2.9489 REMARK 3 L33: 1.9424 L12: -0.7557 REMARK 3 L13: -0.3385 L23: -0.3359 REMARK 3 S TENSOR REMARK 3 S11: 0.0294 S12: 0.3110 S13: -0.0718 REMARK 3 S21: -0.4503 S22: -0.0773 S23: -0.0325 REMARK 3 S31: 0.1075 S32: 0.0505 S33: 0.0479 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 145 REMARK 3 ORIGIN FOR THE GROUP (A): 69.8677 55.2236 55.7720 REMARK 3 T TENSOR REMARK 3 T11: -0.1068 T22: -0.0622 REMARK 3 T33: -0.0743 T12: 0.0242 REMARK 3 T13: -0.0178 T23: 0.0536 REMARK 3 L TENSOR REMARK 3 L11: 1.9024 L22: 2.0208 REMARK 3 L33: 2.2738 L12: -0.1867 REMARK 3 L13: -0.0269 L23: -0.3616 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: -0.2691 S13: -0.2137 REMARK 3 S21: 0.2348 S22: 0.0558 S23: -0.0601 REMARK 3 S31: 0.1303 S32: 0.1527 S33: -0.0302 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1W90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1290021199. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48338 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1GWM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA/HEPES BUFFER PH 7.5, 150 MM REMARK 280 KSCN, 20% ETHYLENE GLYCOL, 18% PEG3350, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.17700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.59500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.76550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.59500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.59500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.58850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.59500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.59500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.76550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.59500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.59500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.58850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.17700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2038 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE ASP 447 ALA, CHAIN A AND CHAIN B REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASN A 2 REMARK 465 SER B 1 REMARK 465 ASN B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 146 REMARK 465 GLU B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 152 O REMARK 470 ILE B 144 O REMARK 470 ASN B 145 CG OD1 ND2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU B 96 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 12 -92.70 -99.13 REMARK 500 ASN A 69 137.80 -173.02 REMARK 500 LYS B 12 -79.10 -96.88 REMARK 500 ILE B 144 -81.80 -83.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1154 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 40 OD1 REMARK 620 2 HOH A2026 O 96.1 REMARK 620 N 1 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1146 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GWK RELATED DB: PDB REMARK 900 CARBOHYDRATE BINDING MODULE FAMILY29 REMARK 900 RELATED ID: 1GWL RELATED DB: PDB REMARK 900 CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH MANNOHEXAOSE REMARK 900 RELATED ID: 1GWM RELATED DB: PDB REMARK 900 CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH GLUCOHEXAOSE REMARK 900 RELATED ID: 1OH3 RELATED DB: PDB REMARK 900 E78R MUTANT OF A CARBOHYDRATE BINDING MODULE FAMILY 29 REMARK 900 RELATED ID: 1W8T RELATED DB: PDB REMARK 900 CBM29-2 MUTANT K74A COMPLEXED WITH CELLULOHEXAOSE: PROBING THE REMARK 900 MECHANISM OF LIGAND RECOGNITION BY FAMILY 29 CARBOHYDRATE BINDING REMARK 900 MODULES REMARK 900 RELATED ID: 1W8U RELATED DB: PDB REMARK 900 CBM29-2 MUTANT D83A COMPLEXED WITH MANNOHEXAOSE: PROBING THE REMARK 900 MECHANISM OF LIGAND RECOGNITION BY FAMILY 29 CARBOHYDRATE BINDING REMARK 900 MODULES REMARK 900 RELATED ID: 1W8W RELATED DB: PDB REMARK 900 CBM29-2 MUTANT Y46A: PROBING THE MECHANISM OF LIGAND RECOGNITION BY REMARK 900 FAMILY 29 CARBOHYDRATE BINDING MODULES REMARK 900 RELATED ID: 1W8Z RELATED DB: PDB REMARK 900 CBM29-2 MUTANT K85A: PROBING THE MECHANISM OF LIGAND RECOGNITION BY REMARK 900 FAMILY 29 CARBOHYDRATE BINDING MODULES REMARK 900 RELATED ID: 1W9F RELATED DB: PDB REMARK 900 CBM29-2 MUTANT R112A: PROBING THE MECHANISM OF LIGAND RECOGNITION REMARK 900 BY FAMILY 29 CARBOHYDRATE BINDING MODULES DBREF 1W90 A 1 145 UNP Q9C171 Q9C171 334 478 DBREF 1W90 A 146 153 PDB 1W90 1W90 146 153 DBREF 1W90 B 1 145 UNP Q9C171 Q9C171 334 478 DBREF 1W90 B 146 153 PDB 1W90 1W90 146 153 SEQADV 1W90 ALA A 114 UNP Q9C171 ASP 447 ENGINEERED MUTATION SEQADV 1W90 ALA B 114 UNP Q9C171 ASP 447 ENGINEERED MUTATION SEQRES 1 A 153 SER ASN VAL ARG ALA THR TYR THR VAL ILE PHE LYS ASN SEQRES 2 A 153 ALA SER GLY LEU PRO ASN GLY TYR ASP ASN TRP GLY TRP SEQRES 3 A 153 GLY CYS THR LEU SER TYR TYR GLY GLY ALA MET ILE ILE SEQRES 4 A 153 ASN PRO GLN GLU GLY LYS TYR GLY ALA VAL SER LEU LYS SEQRES 5 A 153 ARG ASN SER GLY SER PHE ARG GLY GLY SER LEU ARG PHE SEQRES 6 A 153 ASP MET LYS ASN GLU GLY LYS VAL LYS ILE LEU VAL GLU SEQRES 7 A 153 ASN SER GLU ALA ASP GLU LYS PHE GLU VAL GLU THR ILE SEQRES 8 A 153 SER PRO SER ASP GLU TYR VAL THR TYR ILE LEU ASP VAL SEQRES 9 A 153 ASP PHE ASP LEU PRO PHE ASP ARG ILE ALA PHE GLN ASP SEQRES 10 A 153 ALA PRO GLY ASN GLY ASP ARG ILE TRP ILE LYS ASN LEU SEQRES 11 A 153 VAL HIS SER THR GLY SER ALA ASP ASP PHE VAL ASP PRO SEQRES 12 A 153 ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 153 SER ASN VAL ARG ALA THR TYR THR VAL ILE PHE LYS ASN SEQRES 2 B 153 ALA SER GLY LEU PRO ASN GLY TYR ASP ASN TRP GLY TRP SEQRES 3 B 153 GLY CYS THR LEU SER TYR TYR GLY GLY ALA MET ILE ILE SEQRES 4 B 153 ASN PRO GLN GLU GLY LYS TYR GLY ALA VAL SER LEU LYS SEQRES 5 B 153 ARG ASN SER GLY SER PHE ARG GLY GLY SER LEU ARG PHE SEQRES 6 B 153 ASP MET LYS ASN GLU GLY LYS VAL LYS ILE LEU VAL GLU SEQRES 7 B 153 ASN SER GLU ALA ASP GLU LYS PHE GLU VAL GLU THR ILE SEQRES 8 B 153 SER PRO SER ASP GLU TYR VAL THR TYR ILE LEU ASP VAL SEQRES 9 B 153 ASP PHE ASP LEU PRO PHE ASP ARG ILE ALA PHE GLN ASP SEQRES 10 B 153 ALA PRO GLY ASN GLY ASP ARG ILE TRP ILE LYS ASN LEU SEQRES 11 B 153 VAL HIS SER THR GLY SER ALA ASP ASP PHE VAL ASP PRO SEQRES 12 B 153 ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS HET NA A1154 1 HET EDO B1146 4 HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NA NA 1+ FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *118(H2 O) HELIX 1 1 ASP A 142 HIS A 150 1 9 SHEET 1 AA 4 TYR A 7 PHE A 11 0 SHEET 2 AA 4 ILE A 125 SER A 133 -1 O LEU A 130 N ILE A 10 SHEET 3 AA 4 ALA A 36 PRO A 41 -1 O MET A 37 N ILE A 127 SHEET 4 AA 4 CYS A 28 TYR A 33 -1 O THR A 29 N ASN A 40 SHEET 1 AB 4 TYR A 7 PHE A 11 0 SHEET 2 AB 4 ILE A 125 SER A 133 -1 O LEU A 130 N ILE A 10 SHEET 3 AB 4 SER A 62 ASN A 69 -1 O SER A 62 N SER A 133 SHEET 4 AB 4 SER A 94 ASP A 103 -1 O SER A 94 N ASN A 69 SHEET 1 AC 5 TYR A 21 ASN A 23 0 SHEET 2 AC 5 ALA A 48 ARG A 53 -1 O LYS A 52 N ASP A 22 SHEET 3 AC 5 ARG A 112 ASP A 117 -1 O ILE A 113 N LEU A 51 SHEET 4 AC 5 VAL A 73 ASN A 79 -1 O LYS A 74 N GLN A 116 SHEET 5 AC 5 GLU A 84 ILE A 91 -1 O GLU A 84 N ASN A 79 SHEET 1 BA 4 TYR B 7 PHE B 11 0 SHEET 2 BA 4 ILE B 125 SER B 133 -1 O LEU B 130 N ILE B 10 SHEET 3 BA 4 ALA B 36 PRO B 41 -1 O MET B 37 N ILE B 127 SHEET 4 BA 4 CYS B 28 TYR B 33 -1 O THR B 29 N ASN B 40 SHEET 1 BB 4 TYR B 7 PHE B 11 0 SHEET 2 BB 4 ILE B 125 SER B 133 -1 O LEU B 130 N ILE B 10 SHEET 3 BB 4 SER B 62 ASN B 69 -1 O SER B 62 N SER B 133 SHEET 4 BB 4 SER B 94 ASP B 103 -1 O SER B 94 N ASN B 69 SHEET 1 BC 5 TYR B 21 ASN B 23 0 SHEET 2 BC 5 ALA B 48 ARG B 53 -1 O LYS B 52 N ASP B 22 SHEET 3 BC 5 ARG B 112 ASP B 117 -1 O ILE B 113 N LEU B 51 SHEET 4 BC 5 VAL B 73 ASN B 79 -1 O LYS B 74 N GLN B 116 SHEET 5 BC 5 GLU B 84 ILE B 91 -1 O GLU B 84 N ASN B 79 LINK OD1 ASN A 40 NA NA A1154 1555 1555 2.26 LINK NA NA A1154 O HOH A2026 1555 1555 2.22 SITE 1 AC1 4 ASN A 40 PRO A 41 GLY A 122 HOH A2026 SITE 1 AC2 8 SER B 31 ILE B 38 ASN B 40 PRO B 41 SITE 2 AC2 8 GLN B 42 GLU B 43 ARG B 124 HOH B2029 CRYST1 93.190 93.190 82.354 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010731 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012143 0.00000